Pregenerated sensors for AP5B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049562Ensembl transcript IDs: ENSMUST00000096318.4, ENSMUST00000235542.2, ENSMUST00000235575.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGAACAAGGGCCAGAAGCAGGCTGACAGGCTGGATGGGACCTGTTTaGCCTGGGAGGCTCCGCAGCATCCCCAGGGCGCCGGCCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RTRARSRLTGWMGPV*PGRLRSIPRAPASS Trigger: GCTGCTGGCCGGCGCCCTGGGGATGCTGCGGAGCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTTCTGGCCCTTGTTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | CCGCCTGTCCGCAGCAGAGCACGGCACACCCGCAGTAGGGCCTGGTaGAGGCCCCAGTCGGTGCAGTGCACAGCTGCAGCCTGTAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PPVRSRARHTRSRAW*RPQSVQCTAAACRK Trigger: CTTTCTACAGGCTGCAGCTGTGCACTGCACCGACTGGGGCCTCCACCAGGCCCTACTGCGGGTGTGCCGTGCTCTGCTGCGGACAGGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | CAGAGAGTGGCCAAGGCCCGGGGACCACCATCCAGGGCTGCCCTTTaGTGTAGCCCAGCCAGCACCTCCTGTAGGAACCACTGTGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QRVAKARGPPSRAAL*CSPASTSCRNHCGP Trigger: GGGCCCACAGTGGTTCCTACAGGAGGTGCTGGCTGGGCTACAGCAAAGGGCAGCCCTGGATGGTGGTCCCCGGGCCTTGGCCACTCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | CGGGCAGGGGCTGGGCATCGGGGCTGCAGAAGCAGGTACAGAGGATaGGCAGGTTGTCCCGGACGCAAGCAGGGTATGTGGACAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RAGAGHRGCRSRYRG*AGCPGRKQGMWTAS Trigger: GGAGGCTGTCCACATACCCTGCTTGCGTCCGGGACAACCTGCGCATCCTCTGTACCTGCTTCTGCAGCCCCGATGCCCAGCCCCTGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | GACCCAAATCCTCACCTTCGGCACCTGCCAGAAAGGCGGATGGGCTaGCTCGGAAGGCCCCCAGGCGCTGGGCCCAGGCTTCTCGACCTA | + |
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Preference number: 5 (lower is better) Translates to: DPNPHLRHLPERRMG*LGRPPGAGPRLLDL Trigger: TAGGTCGAGAAGCCTGGGCCCAGCGCCTGGGGGCCTTCCGAGCCAGCCCATCCGCCTTTCTGGCAGGTGCCGAAGGTGAGGATTTGGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | TGCCAGCAAAGGGCTTCGCTCTCGCCTGGCCTGGCCACCGCCTCTTaGAGCAGCACCTCCCTGAGGGGCTCTCTCAGCTCAGGGCTTACC | + |
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Preference number: 5 (lower is better) Translates to: CQQRASLSPGLATAS*SSTSLRGSLSSGLT Trigger: GGTAAGCCCTGAGCTGAGAGAGCCCCTCAGGGAGGTGCTGCTCCAAGAGGCGGTGGCCAGGCCAGGCGAGAGCGAAGCCCTTTGCTGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | ACAGTGTCAGCTGTGCCGTGCCCAGCAGCCGAACCAGCTGTGGCTTaGAAAGCACTGGTGGCTGTCCCCGAAGACCCCGGAGGGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TVSAVPCPAAEPAVA*KALVAVPEDPGGPS Trigger: GCTGGGCCCTCCGGGGTCTTCGGGGACAGCCACCAGTGCTTTTCAAGCCACAGCTGGTTCGGCTGCTGGGCACGGCACAGCTGACACTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | GGTCAGCAAAGTTCACAGACAGGGGTGGCAGGCGGGCATGGCACGTaGGGCCAGCGGATGTGCTGTAAAGGGCCCGGACGTGTAGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GQQSSQTGVAGGHGT*GQRMCCKGPGRVGG Trigger: CCCGCCTACACGTCCGGGCCCTTTACAGCACATCCGCTGGCCTCACGTGCCATGCCCGCCTGCCACCCCTGTCTGTGAACTTTGCTGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | TTCCACACGGAAGCGCAGCTCCAGCGAGTAGACGGGAGCATCCAGTaGCTGCACCTGCAGACACAGCACCGGGAGCGGGCCTTTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: FHTEAQLQRVDGSIQ*LHLQTQHRERAFGL Trigger: CAGGCCAAAGGCCCGCTCCCGGTGCTGTGTCTGCAGGTGCAGGCACTGGATGCTCCCGTCTACTCGCTGGAGCTGCGCTTCCGTGTGGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | AGCACAGAGCAGACACAGCAAATGCAGGCGGGCCAGGAGAACCGTTaGGTCATGAAGGAGACTGGGCATGAGGCCCCGGCACAGCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: STEQTQQMQAGQENR*VMKETGHEAPAQLG Trigger: CCCCAGCTGTGCCGGGGCCTCATGCCCAGTCTCCTTCATGACCCAACGGTTCTCCTGGCCCGCCTGCATTTGCTGTGTCTGCTCTGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | CATCCAGTGCCTGCACCTGCAGACACAGCACCGGGAGCGGGCCTTTaGCCTGCTGAGGCCCCACACTCAACTGAATTGGGGCTGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: HPVPAPADTAPGAGL*PAEAPHSTELGLRS Trigger: AGACCTCAGCCCCAATTCAGTTGAGTGTGGGGCCTCAGCAGGCCAAAGGCCCGCTCCCGGTGCTGTGTCTGCAGGTGCAGGCACTGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | GGAGGCCCCAGTCGGTGCAGTGCACAGCTGCAGCCTGTAGAAAGCTaGGTGTGGTACTCTGAGTGGCCCCCTCTGCCACCTTTGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GGPSRCSAQLQPVES*VWYSEWPPLPPLPA Trigger: TGCTGGCAAAGGTGGCAGAGGGGGCCACTCAGAGTACCACACTCAGCTTTCTACAGGCTGCAGCTGTGCACTGCACCGACTGGGGCCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | GTCCGTCAGCATTCTCTAGCTGTCTGGCCAGTTCCTGCAGCAAGTTaGCCAGACCATCTCCCCCGCCTGTCCGCAGCAGAGCACGGCACA | + |
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Preference number: 5 (lower is better) Translates to: VRQHSLAVWPVPAAS*PDHLPRLSAAEHGT Trigger: TGTGCCGTGCTCTGCTGCGGACAGGCGGGGGAGATGGTCTGGCCAACTTGCTGCAGGAACTGGCCAGACAGCTAGAGAATGCTGACGGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | GGGCCCAGCCCAACAGCCACAGAAGTTGAGCCTGAGCCACAGGAGTaGGCAGATAGGAAGTGTCCAGAAGCTGGGCCACGGCAGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GPSPTATEVEPEPQE*ADRKCPEAGPRQPS Trigger: TGAAGGCTGCCGTGGCCCAGCTTCTGGACACTTCCTATCTGCTCACTCCTGTGGCTCAGGCTCAACTTCTGTGGCTGTTGGGCTGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | ACAAAGGGCTCTAGGTACTGGGACACCAAGGCCTCCAGGCCCTGCTaGCCAAGTGGACACCACACACGGCTCTCTACGCCCTTTGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: TKGSRYWDTKASRPC*PSGHHTRLSTPFGR Trigger: CCTACCAAAGGGCGTAGAGAGCCGTGTGTGGTGTCCACTTGGGCAGCAGGGCCTGGAGGCCTTGGTGTCCCAGTACCTAGAGCCCTTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | ACTGTACCACCAAGGTGTCGTGTAGAACAAGGGCCAGAAGCAGGCTaGCAGGCTGGATGGGACCTGTTTGCCCTGGGAGGCTCCGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TVPPRCRVEQGPEAG*QAGWDLFALGGSAA Trigger: TGCTGCGGAGCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTTCTGGCCCTTGTTCTACACGACACCTTGGTGGTACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | ACTACAAAGGGCTCTAGGTACTGGGACACCAAGGCCTCCAGGCCCTaGTGCCCAAGTGGACACCACACACGGCTCTCTACGCCCTTTGGT | + |
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Preference number: 5 (lower is better) Translates to: TTKGSRYWDTKASRP*CPSGHHTRLSTPFG Trigger: ACCAAAGGGCGTAGAGAGCCGTGTGTGGTGTCCACTTGGGCAGCAGGGCCTGGAGGCCTTGGTGTCCCAGTACCTAGAGCCCTTTGTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | AGTATAGTCGGGCATGGTCCCGTCCGTCAGCATTCTCTAGCTGTCTaGCCAGTTCCTGCAGCAAGTTGGCCAGACCATCTCCCCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SIVGHGPVRQHSLAV*PVPAASWPDHLPRL Trigger: CAGGCGGGGGAGATGGTCTGGCCAACTTGCTGCAGGAACTGGCCAGACAGCTAGAGAATGCTGACGGACGGGACCATGCCCGACTATACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | CTGAAGGTCTTGTGGGCAGGAGGACAAGCGTGTCCAACAGGGAAGTaGCAGCAGCCTCCGCGGCAGGTGCATCAGGCCAAAGTTTATCAG | + |
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Preference number: 5 (lower is better) Translates to: LKVLWAGGQACPTGK*QQPPRQVHQAKVYQ Trigger: CTGATAAACTTTGGCCTGATGCACCTGCCGCGGAGGCTGCTGCCACTTCCCTGTTGGACACGCTTGTCCTCCTGCCCACAAGACCTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | CCATATGGACCACGGCAGGGCACACGGGCAGGACCTACCTTGGTCTaGTCGCTTAGCTTTTCACTCCTTAGGTCACTCAACAGGTCGCGA | + |
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Preference number: 5 (lower is better) Translates to: PYGPRQGTRAGPTLV*SLSFSLLRSLNRSR Trigger: TCGCGACCTGTTGAGTGACCTAAGGAGTGAAAAGCTAAGCGAGCAGACCAAGGTAGGTCCTGCCCGTGTGCCCTGCCGTGGTCCATATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235542.2 |
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| CDS CCA 90 bp | CCAGTGCAGGTGCAGCCAGTGAGGGGCCCAGCGCCATCCCCAACTTaGAACTTGACAGATGGGACAAGAGGACATAGTATAGTCGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PVQVQPVRGPAPSPT*NLTDGTRGHSIVGH Trigger: ATGCCCGACTATACTATGTCCTCTTGTCCCATCTGTCAAGTTCCAAGTTGGGGATGGCGCTGGGCCCCTCACTGGCTGCACCTGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 90 bp | GACAAGCGTGTCCAACAGGGAAGTGGCAGCAGCCTCCGCGGCAGGTaGATCAGGCCAAAGTTTATCAGAGTACTCCAAGCTCAGTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: DKRVQQGSGSSLRGR*IRPKFIRVLQAQCQ Trigger: CTGACACTGAGCTTGGAGTACTCTGATAAACTTTGGCCTGATGCACCTGCCGCGGAGGCTGCTGCCACTTCCCTGTTGGACACGCTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | AGGTCCACAAAGTGGGGTGCCAGGGAAGGCCGAGCTCGGTACAGTTaGGCCAGTCCGCGGATCAAAAATGTCTGTACTGTGGAGTGTCTA | + |
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Preference number: 5 (lower is better) Translates to: RSTKWGAREGRARYS*ASPRIKNVCTVECL Trigger: TAGACACTCCACAGTACAGACATTTTTGATCCGCGGACTGGCCCAACTGTACCGAGCTCGGCCTTCCCTGGCACCCCACTTTGTGGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 90 bp | ACTGTGGAGTGTCTAGTCAGGCAGTTAGTAACAAGGTATGAGGCTTaGAAACAGAGAGTGGCCAAGGCCCGGGGACCACCATCCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: TVECLVRQLVTRYEA*KQRVAKARGPPSRA Trigger: AGCCCTGGATGGTGGTCCCCGGGCCTTGGCCACTCTCTGTTTCCAAGCCTCATACCTTGTTACTAACTGCCTGACTAGACACTCCACAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | TGTCTGTACTGTGGAGTGTCTAGTCAGGCAGTTAGTAACAAGGTATaGGGCTTGGAAACAGAGAGTGGCCAAGGCCCGGGGACCACCATC | + |
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Preference number: 5 (lower is better) Translates to: CLYCGVSSQAVSNKV*GLETESGQGPGTTI Trigger: GATGGTGGTCCCCGGGCCTTGGCCACTCTCTGTTTCCAAGCCTCATACCTTGTTACTAACTGCCTGACTAGACACTCCACAGTACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 90 bp | CAAAGTTTATCAGAGTACTCCAAGCTCAGTGTCAGTAAGGAAACCTaGGATGGGGGATTTAAGAGGAACTCGTTGAGTTCAGCATGCGGT | + |
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Preference number: 5 (lower is better) Translates to: QSLSEYSKLSVSKET*DGGFKRNSLSSACG Trigger: ACCGCATGCTGAACTCAACGAGTTCCTCTTAAATCCCCCATCTCAGGTTTCCTTACTGACACTGAGCTTGGAGTACTCTGATAAACTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235542.2 |
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| CDS CCA 72 bp | CCTCACCTTCGGCACCTGCCAGAAAGGCGGATGGGCTaGCTCGGAAGGCCCCCAGGCGCTGGGCCCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PHLRHLPERRMG*LGRPPGAGPRL Trigger: AAGCCTGGGCCCAGCGCCTGGGGGCCTTCCGAGCCAGCCCATCCGCCTTTCTGGCAGGTGCCGAAGGTGAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | GCCAGAAGCAGGCTGACAGGCTGGATGGGACCTGTTTaGCCTGGGAGGCTCCGCAGCATCCCCAGGGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: ARSRLTGWMGPV*PGRLRSIPRAP Trigger: CGGCGCCCTGGGGATGCTGCGGAGCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTTCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | AAGCAGGCTGACAGGCTGGATGGGACCTGTTTGCCCTaGGAGGCTCCGCAGCATCCCCAGGGCGCCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: KQADRLDGTCLP*EAPQHPQGAGQ Trigger: CTGGCCGGCGCCCTGGGGATGCTGCGGAGCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | CAAATCCTCACCTTCGGCACCTGCCAGAAAGGCGGATaGGCTGGCTCGGAAGGCCCCCAGGCGCTGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QILTFGTCQKGG*AGSEGPQALGP Trigger: TGGGCCCAGCGCCTGGGGGCCTTCCGAGCCAGCCCATCCGCCTTTCTGGCAGGTGCCGAAGGTGAGGATTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | CATCTGCAGGTGCCAGCAAAGGGCTTCGCTCTCGCCTaGCCTGGCCACCGCCTCTTGGAGCAGCACCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: HLQVPAKGFALA*PGHRLLEQHLP Trigger: AGGGAGGTGCTGCTCCAAGAGGCGGTGGCCAGGCCAGGCGAGAGCGAAGCCCTTTGCTGGCACCTGCAGATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | GCTGTGCCGTGCCCAGCAGCCGAACCAGCTGTGGCTTaGAAAGCACTGGTGGCTGTCCCCGAAGACCCCGGA | + |
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Preference number: 6 (lower is better) Translates to: AVPCPAAEPAVA*KALVAVPEDPG Trigger: TCCGGGGTCTTCGGGGACAGCCACCAGTGCTTTTCAAGCCACAGCTGGTTCGGCTGCTGGGCACGGCACAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | AGTTCACAGACAGGGGTGGCAGGCGGGCATGGCACGTaGGGCCAGCGGATGTGCTGTAAAGGGCCCGGACGT | + |
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Preference number: 6 (lower is better) Translates to: SSQTGVAGGHGT*GQRMCCKGPGR Trigger: ACGTCCGGGCCCTTTACAGCACATCCGCTGGCCTCACGTGCCATGCCCGCCTGCCACCCCTGTCTGTGAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | CAACAGGTCGCGACCCAAATCCTCACCTTCGGCACCTaGCAGAAAGGCGGATGGGCTGGCTCGGAAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QQVATQILTFGT*QKGGWAGSEGP Trigger: GGGGCCTTCCGAGCCAGCCCATCCGCCTTTCTGGCAGGTGCCGAAGGTGAGGATTTGGGTCGCGACCTGTTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | CCTGCACCTGCAGACACAGCACCGGGAGCGGGCCTTTaGCCTGCTGAGGCCCCACACTCAACTGAATTGGGG | + |
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Preference number: 6 (lower is better) Translates to: PAPADTAPGAGL*PAEAPHSTELG Trigger: CCCCAATTCAGTTGAGTGTGGGGCCTCAGCAGGCCAAAGGCCCGCTCCCGGTGCTGTGTCTGCAGGTGCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 90 bp | GGCTGGGCATCGGGGCTGCAGAAGCAGGTACAGAGGATGCGCAGGTaGTCCCGGACGCAAGCAGGGTATGTGGACAGCCTCCAACGGCTC | + |
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Preference number: 6 (lower is better) Translates to: GWASGLQKQVQRMRR*SRTQAGYVDSLQRL Trigger: GAGCCGTTGGAGGCTGTCCACATACCCTGCTTGCGTCCGGGACAACCTGCGCATCCTCTGTACCTGCTTCTGCAGCCCCGATGCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | TGGGCGAGGGTAAAGCTGGGTGCTGGGCTCCCAAGGTaGGCCTGCGGAGGAGCAGAGCTTCATCCTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: WARVKLGAGLPR*ACGGAELHPVQ Trigger: CTGCACAGGATGAAGCTCTGCTCCTCCGCAGGCTCACCTTGGGAGCCCAGCACCCAGCTTTACCCTCGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | CTCCCAGTGGAGAAGTCCTCAGCCACCAGCAGGCCTTaGAGGCCAGCCCCAGACCTGGACTGTACCACCAAG | + |
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Preference number: 6 (lower is better) Translates to: LPVEKSSATSRP*RPAPDLDCTTK Trigger: CTTGGTGGTACAGTCCAGGTCTGGGGCTGGCCTGCAAGGCCTGCTGGTGGCTGAGGACTTCTCCACTGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | GCTGGGCATCGGGGCTGCAGAAGCAGGTACAGAGGATaGGCAGGTTGTCCCGGACGCAAGCAGGGTATGTGG | + |
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Preference number: 6 (lower is better) Translates to: AGHRGCRSRYRG*AGCPGRKQGMW Trigger: CCACATACCCTGCTTGCGTCCGGGACAACCTGCGCATCCTCTGTACCTGCTTCTGCAGCCCCGATGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 90 bp | CGTCCGTCAGCATTCTCTAGCTGTCTGGCCAGTTCCTGCAGCAAGTaGGCCAGACCATCTCCCCCGCCTGTCCGCAGCAGAGCACGGCAC | + |
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Preference number: 6 (lower is better) Translates to: RPSAFSSCLASSCSK*ARPSPPPVRSRARH Trigger: GTGCCGTGCTCTGCTGCGGACAGGCGGGGGAGATGGTCTGGCCAACTTGCTGCAGGAACTGGCCAGACAGCTAGAGAATGCTGACGGACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | CGCAGTAGGGCCTGGTGGAGGCCCCAGTCGGTGCAGTaGACAGCTGCAGCCTGTAGAAAGCTGAGTGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: RSRAWWRPQSVQ*TAAACRKLSVV Trigger: TACCACACTCAGCTTTCTACAGGCTGCAGCTGTGCACTGCACCGACTGGGGCCTCCACCAGGCCCTACTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | TTGTGGGCAGGAGGACAAGCGTGTCCAACAGGGAAGTaGCAGCAGCCTCCGCGGCAGGTGCATCAGGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LWAGGQACPTGK*QQPPRQVHQAK Trigger: TTTGGCCTGATGCACCTGCCGCGGAGGCTGCTGCCACTTCCCTGTTGGACACGCTTGTCCTCCTGCCCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | TCGTGTAGAACAAGGGCCAGAAGCAGGCTGACAGGCTaGATGGGACCTGTTTGCCCTGGGAGGCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SCRTRARSRLTG*MGPVCPGRLRS Trigger: GCTGCGGAGCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTTCTGGCCCTTGTTCTACACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | TGTCAGCTGTGCCGTGCCCAGCAGCCGAACCAGCTGTaGCTTGAAAAGCACTGGTGGCTGTCCCCGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: CQLCRAQQPNQL*LEKHWWLSPKT Trigger: GGTCTTCGGGGACAGCCACCAGTGCTTTTCAAGCCACAGCTGGTTCGGCTGCTGGGCACGGCACAGCTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | CAGACACAGCAAATGCAGGCGGGCCAGGAGAACCGTTaGGTCATGAAGGAGACTGGGCATGAGGCCCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: QTQQMQAGQENR*VMKETGHEAPA Trigger: TGCCGGGGCCTCATGCCCAGTCTCCTTCATGACCCAACGGTTCTCCTGGCCCGCCTGCATTTGCTGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 72 bp | TCGGGGCTGCAGAAGCAGGTACAGAGGATGCGCAGGTaGTCCCGGACGCAAGCAGGGTATGTGGACAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SGLQKQVQRMRR*SRTQAGYVDSL Trigger: GAGGCTGTCCACATACCCTGCTTGCGTCCGGGACAACCTGCGCATCCTCTGTACCTGCTTCTGCAGCCCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 90 bp | CTGTCCCCGAAGACCCCGGAGGGCCCAGCCCAACAGCCACAGAAGTaGAGCCTGAGCCACAGGAGTGAGCAGATAGGAAGTGTCCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSPKTPEGPAQQPQK*SLSHRSEQIGSVQK Trigger: CTTCTGGACACTTCCTATCTGCTCACTCCTGTGGCTCAGGCTCAACTTCTGTGGCTGTTGGGCTGGGCCCTCCGGGGTCTTCGGGGACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | CCAAGGTGTCGTGTAGAACAAGGGCCAGAAGCAGGCTaGCAGGCTGGATGGGACCTGTTTGCCCTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRCRVEQGPEAG*QAGWDLFALGG Trigger: GCCTCCCAGGGCAAACAGGTCCCATCCAGCCTGTCAGCCTGCTTCTGGCCCTTGTTCTACACGACACCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | CGTCCGTCAGCATTCTCTAGCTGTCTGGCCAGTTCCTaGAGCAAGTTGGCCAGACCATCTCCCCCGCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RPSAFSSCLASS*SKLARPSPPPV Trigger: GACAGGCGGGGGAGATGGTCTGGCCAACTTGCTGCAGGAACTGGCCAGACAGCTAGAGAATGCTGACGGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 72 bp | GCATTCTCTAGCTGTCTGGCCAGTTCCTGCAGCAAGTaGGCCAGACCATCTCCCCCGCCTGTCCGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: AFSSCLASSCSK*ARPSPPPVRSR Trigger: TCTGCTGCGGACAGGCGGGGGAGATGGTCTGGCCAACTTGCTGCAGGAACTGGCCAGACAGCTAGAGAATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | AGTCGGTGCAGTGCACAGCTGCAGCCTGTAGAAAGCTaGGTGTGGTACTCTGAGTGGCCCCCTCTGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: SRCSAQLQPVES*VWYSEWPPLPP Trigger: AGGTGGCAGAGGGGGCCACTCAGAGTACCACACTCAGCTTTCTACAGGCTGCAGCTGTGCACTGCACCGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | CCAACAACAGGAGCCTCCGGAGAGCTGAAGGTCTTGTaGGCAGGAGGACAAGCGTGTCCAACAGGGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: PTTGASGELKVL*AGGQACPTGKW Trigger: CCACTTCCCTGTTGGACACGCTTGTCCTCCTGCCCACAAGACCTTCAGCTCTCCGGAGGCTCCTGTTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CAA 90 bp | CAGGTGCAGCCAGTGAGGGGCCCAGCGCCATCCCCAACTTGGAACTaGACAGATGGGACAAGAGGACATAGTATAGTCGGGCATGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QVQPVRGPAPSPTWN*TDGTRGHSIVGHGP Trigger: GGGACCATGCCCGACTATACTATGTCCTCTTGTCCCATCTGTCAAGTTCCAAGTTGGGGATGGCGCTGGGCCCCTCACTGGCTGCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 90 bp | GGCCCTGCTGCCCAAGTGGACACCACACACGGCTCTCTACGCCCTTaGGTAGGCAGGAGTTCCAGAGCTCATCGAAGAAACGCAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GPAAQVDTTHGSLRP*VGRSSRAHRRNATQ Trigger: CTGAGTTGCGTTTCTTCGATGAGCTCTGGAACTCCTGCCTACCAAAGGGCGTAGAGAGCCGTGTGTGGTGTCCACTTGGGCAGCAGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | ACCTCCCTGAGGGGCTCTCTCAGCTCAGGGCTTACCTaGTCTAAGAGGTCCACAAAGTGGGGTGCCAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSLRGSLSSGLT*SKRSTKWGARE Trigger: TTCCCTGGCACCCCACTTTGTGGACCTCTTAGATCAGGTAAGCCCTGAGCTGAGAGAGCCCCTCAGGGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | AAGTGGGGTGCCAGGGAAGGCCGAGCTCGGTACAGTTaGGCCAGTCCGCGGATCAAAAATGTCTGTACTGTG | + |
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Preference number: 6 (lower is better) Translates to: KWGAREGRARYS*ASPRIKNVCTV Trigger: CACAGTACAGACATTTTTGATCCGCGGACTGGCCCAACTGTACCGAGCTCGGCCTTCCCTGGCACCCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 72 bp | CCAGTGAGGGGCCCAGCGCCATCCCCAACTTGGAACTaGACAGATGGGACAAGAGGACATAGTATAGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PVRGPAPSPTWN*TDGTRGHSIVG Trigger: CCCGACTATACTATGTCCTCTTGTCCCATCTGTCAAGTTCCAAGTTGGGGATGGCGCTGGGCCCCTCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CAA 72 bp | GCCCAAGTGGACACCACACACGGCTCTCTACGCCCTTaGGTAGGCAGGAGTTCCAGAGCTCATCGAAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: AQVDTTHGSLRP*VGRSSRAHRRN Trigger: GTTTCTTCGATGAGCTCTGGAACTCCTGCCTACCAAAGGGCGTAGAGAGCCGTGTGTGGTGTCCACTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | CTGGACCTAGTGGGCAATTCTCGGGGAAGCTCAGGATaGAATGCAGGTAAAAGAGGTGTGTGGGCGAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: LDLVGNSRGSSG*NAGKRGVWARV Trigger: TACCCTCGCCCACACACCTCTTTTACCTGCATTGCATCCTGAGCTTCCCCGAGAATTGCCCACTAGGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | AGTTCTCCAAGGCATTCACAGGCTGTGGCCTGTAGATaGCGCTGTTCTGAAGGGGTTCCAAAGCTTCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSPRHSQAVACR*RCSEGVPKLRP Trigger: GGGACGAAGCTTTGGAACCCCTTCAGAACAGCGCCATCTACAGGCCACAGCCTGTGAATGCCTTGGAGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000096318.4 ENSMUST00000235542.2 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | GTGCAGCCAGTGAGGGGCCCAGCGCCATCCCCAACTTaGAACTTGACAGATGGGACAAGAGGACATAGTATA | + |
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Preference number: 6 (lower is better) Translates to: VQPVRGPAPSPT*NLTDGTRGHSI Trigger: TATACTATGTCCTCTTGTCCCATCTGTCAAGTTCCAAGTTGGGGATGGCGCTGGGCCCCTCACTGGCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS TCA 72 bp | TGTGGAGTGTCTAGTCAGGCAGTTAGTAACAAGGTATaGGGCTTGGAAACAGAGAGTGGCCAAGGCCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: CGVSSQAVSNKV*GLETESGQGPG Trigger: CCCCGGGCCTTGGCCACTCTCTGTTTCCAAGCCTCATACCTTGTTACTAACTGCCTGACTAGACACTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS CCA 72 bp | TGTCTAGTCAGGCAGTTAGTAACAAGGTATGAGGCTTaGAAACAGAGAGTGGCCAAGGCCCGGGGACCACCA | + |
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Preference number: 6 (lower is better) Translates to: CLVRQLVTRYEA*KQRVAKARGPP Trigger: TGGTGGTCCCCGGGCCTTGGCCACTCTCTGTTTCCAAGCCTCATACCTTGTTACTAACTGCCTGACTAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000096318.4 ENSMUST00000235575.2 |
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| CDS GCA 72 bp | GATGGGGGATTTAAGAGGAACTCGTTGAGTTCAGCATaGGGTAGTATGAAGCAACCATATGGACCACGGCAG | + |
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Preference number: 6 (lower is better) Translates to: DGGFKRNSLSSA*GSMKQPYGPRQ Trigger: CTGCCGTGGTCCATATGGTTGCTTCATACTACCGCATGCTGAACTCAACGAGTTCCTCTTAAATCCCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235542.2 |
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| CDS TCA 72 bp | TCAGAGTACTCCAAGCTCAGTGTCAGTAAGGAAACCTaGGATGGGGGATTTAAGAGGAACTCGTTGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SEYSKLSVSKET*DGGFKRNSLSS Trigger: TGAACTCAACGAGTTCCTCTTAAATCCCCCATCTCAGGTTTCCTTACTGACACTGAGCTTGGAGTACTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235542.2 |
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