Pregenerated sensors for AP4M1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019518Ensembl transcript IDs: ENSMUST00000019662.11, ENSMUST00000143241.8, ENSMUST00000151318.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGGTCTCCACTaGTACCACTGCACCCCCAAGCACAGCCCCTGCTGGTTCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: HHGSQRAAHRQAGLH*YHCTPKHSPCWFWQ Trigger: CTGCCAGAACCAGCAGGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAGACCAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | GGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTaGCTCCATTGCCTTGCCTGTTCAGACACTGGTGTCTGCGAGAGC | + |
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Preference number: 1 (lower is better) Translates to: GPSARPSHAWLIEGP*LHCLACSDTGVCES Trigger: GCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | GCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCCATTaGCTTGCCTGTTCAGACACTGGTGTCTGCGAGAGCTGCTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ARPSHAWLIEGPWLH*LACSDTGVCESCCS Trigger: GGAGCAGCAGCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 90 bp | CCCTTTCACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTaGAGGTCCCTGGCTCCATTGCCTTGCCTGTTCAGACACTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: PFHRPLSQALARLAY*RSLAPLPCLFRHWC Trigger: ACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | TCCCAGCGTGCAGCCCATCGTCAAGCTGGTCTCCACTGCTACCACTaGACCCCCAAGCACAGCCCCTGCTGGTTCTGGCAGTGTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SQRAAHRQAGLHCYH*TPKHSPCWFWQCSE Trigger: TTCTGAACACTGCCAGAACCAGCAGGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAGACCAGCTTGACGATGGGCTGCACGCTGGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | CAGGCTCTACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTaGAGCCCATCGTCAAGCTGGTCTCCACTGCTACCACTGCACCCC | + |
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Preference number: 1 (lower is better) Translates to: QALLLPLLSPPRFPA*SPSSSWSPLLPLHP Trigger: GGGGTGCAGTGGTAGCAGTGGAGACCAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAGTAGAGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | GGCTCTGGTCAGAACGACTGGACAGGACAGGGCGGCTGGCTGCGCTaGTTGGGGCCACTTTATTCTGCTGTGTCTCTGCCCCGAACAATC | + |
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Preference number: 1 (lower is better) Translates to: GSGQNDWTGQGGWLR*LGPLYSAVSLPRTI Trigger: GATTGTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTCCAGTCGTTCTGACCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 90 bp | CACACTGACCCTTTCACAGGCCCCTCAGCCAGGCCCTCGCACGCCTaGCTTATTGAAGGTCCCTGGCTCCATTGCCTTGCCTGTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: HTDPFTGPSARPSHA*LIEGPWLHCLACSD Trigger: GTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGGGTCAGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 90 bp | GGGGAGAATTTGGGTCCCTTGGGCCCCTTCTCTGTTCCCATGTGGTaGAGGCCAGGGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACA | + |
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Preference number: 1 (lower is better) Translates to: GENLGPLGPFSVPMW*RPGPRLLYKLSRST Trigger: TGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTGGCCTTCACCACATGGGAACAGAGAAGGGGCCCAAGGGACCCAAATTCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | TGGGCCCCTTCTCTGTTCCCATGTGGTGAAGGCCAGGGCCCAGGCTaGTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCAC | + |
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Preference number: 1 (lower is better) Translates to: WAPSLFPCGEGQGPG*STSSAGQQDHTHHH Trigger: GTGATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTGGCCTTCACCACATGGGAACAGAGAAGGGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | CTGGTCAGAACGACTGGACAGGACAGGGCGGCTGGCTGCGCTGCTTaGGGCCACTTTATTCTGCTGTGTCTCTGCCCCGAACAATCCAAC | + |
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Preference number: 1 (lower is better) Translates to: LVRTTGQDRAAGCAA*GHFILLCLCPEQSN Trigger: GTTGGATTGTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTCCAGTCGTTCTGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR TCA 90 bp | ACATTTTCTTCCTGTGTCTGTTCTCTTCATAGCCTCGGCCCACACTaGCCCTTTCACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: TFSSCVCSLHSLGPH*PFHRPLSQALARLA Trigger: AGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGGGTCAGTGTGGGCCGAGGCTATGAAGAGAACAGACACAGGAAGAAAATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 90 bp | GCCTTGGTCCCACTGCACAGAGGGAAAGAGCCGGAAGGGGAGTGGTaGGGGGAGGTCATCAGAGAGCTGGTATCTCATCACAGTCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: ALVPLHRGKEPEGEW*GEVIRELVSHHSQL Trigger: GAGCTGACTGTGATGAGATACCAGCTCTCTGATGACCTCCCCTCACCACTCCCCTTCCGGCTCTTTCCCTCTGTGCAGTGGGACCAAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR GCA 90 bp | GACAGGACAGGGCGGCTGGCTGCGCTGCTTGGGGCCACTTTATTCTaGTGTGTCTCTGCCCCGAACAATCCAACACTGCTGAGGTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: DRTGRLAALLGATLF*CVSAPNNPTLLRSK Trigger: CTTTGACCTCAGCAGTGTTGGATTGTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR GCA 90 bp | CTAAAGGACAGTCTGAGGAATCGAACCTGGAGACCGGAGCATGTGTaGCGAGGGAGTTCAAAGGAGAGGCTGGCAGGACCCAGCCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: LKDSLRNRTWRPEHV*RGSSKERLAGPSPK Trigger: CTTGGGGCTGGGTCCTGCCAGCCTCTCCTTTGAACTCCCTCGGCACACATGCTCCGGTCTCCAGGTTCGATTCCTCAGACTGTCCTTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 90 bp | ACCCTCCTTTCTCGCTCAGGTTCTGTCCCTCAGCACCTCAGCTCCTaGCTCAGGCTCTACTACTACCTCTCCTGTCACCACCACGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TLLSRSGSVPQHLSS*LRLYYYLSCHHHGS Trigger: GGAACCGTGGTGGTGACAGGAGAGGTAGTAGTAGAGCCTGAGCCAGGAGCTGAGGTGCTGAGGGACAGAACCTGAGCGAGAAAGGAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | GCTGGTCTCCACTGCTACCACTGCACCCCCAAGCACAGCCCCTGCTaGTTCTGGCAGTGTTCAGAAATACATTGTGGTCTCTCTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: AGLHCYHCTPKHSPC*FWQCSEIHCGLSSP Trigger: GGGGGAAGAGAGACCACAATGTATTTCTGAACACTGCCAGAACCAGCAGGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAGACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 90 bp | AATGGCTCGCAGCCTACTGGACCTGGCTCTCCCCAGCCTGCTCTGTaGTGTGTCACATGTGCTGACCTCCTCTCTTGTGCAGATTCCTAC | + |
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Preference number: 1 (lower is better) Translates to: NGSQPTGPGSPQPAL*CVTCADLLSCADSY Trigger: GTAGGAATCTGCACAAGAGAGGAGGTCAGCACATGTGACACATCACAGAGCAGGCTGGGGAGAGCCAGGTCCAGTAGGCTGCGAGCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | CAAGCTGGTCTCCACTGCTACCACTGCACCCCCAAGCACAGCCCCTaGTGGTTCTGGCAGTGTTCAGAAATACATTGTGGTCTCTCTTCC | + |
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Preference number: 1 (lower is better) Translates to: QAGLHCYHCTPKHSP*WFWQCSEIHCGLSS Trigger: GGAAGAGAGACCACAATGTATTTCTGAACACTGCCAGAACCAGCAGGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAGACCAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | TTGGCATTACCACAGGCACTAAAGGACAGTCTGAGGAATCGAACCTaGAGACCGGAGCATGTGTGCCGAGGGAGTTCAAAGGAGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: LALPQALKDSLRNRT*RPEHVCRGSSKERL Trigger: CAGCCTCTCCTTTGAACTCCCTCGGCACACATGCTCCGGTCTCCAGGTTCGATTCCTCAGACTGTCCTTTAGTGCCTGTGGTAATGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR TCA 90 bp | TGGACCTGGCTCTCCCCAGCCTGCTCTGTGATGTGTCACATGTGCTaGCCTCCTCTCTTGTGCAGATTCCTACACACTCAAACAACCTGT | + |
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Preference number: 1 (lower is better) Translates to: WTWLSPACSVMCHMC*PPLLCRFLHTQTTC Trigger: ACAGGTTGTTTGAGTGTGTAGGAATCTGCACAAGAGAGGAGGTCAGCACATGTGACACATCACAGAGCAGGCTGGGGAGAGCCAGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 90 bp | CTGTCAAGCCAATGCATATCTCAGAACCGCTGGGAAGGAAGCTCTTaGGCCGTATCTCTCCTTGGACGTCCACCTTCAACAACGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: LSSQCISQNRWEGSS*AVSLLGRPPSTTSH Trigger: ATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGTTCTGAGATATGCATTGGCTTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR TCA 90 bp | GTGGCTGCAGGCGGAGGATCCGATGAGACTCAAACTCATCTAGATTaGCAGAACTATGGAATGACACCTCATCAACTCGAATCCCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: VAAGGGSDETQTHLD*QNYGMTPHQLESLA Trigger: GGCCAGGGATTCGAGTTGATGAGGTGTCATTCCATAGTTCTGTCAATCTAGATGAGTTTGAGTCTCATCGGATCCTCCGCCTGCAGCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 90 bp | AGTCTTGACCATCCATTCACTGGGGACTACAAGGGAAGGTGGGAGTaGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGG | + |
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Preference number: 1 (lower is better) Translates to: SLDHPFTGDYKGRWE*RACVNSRYLEKDSG Trigger: CCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCACCTTCCCTTGTAGTCCCCAGTGAATGGATGGTCAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | CAGAGGCCATTGCTTTTCACTGTGACTTCTAACAGTAACACTGGATaGGCTCCTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGC | + |
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Preference number: 1 (lower is better) Translates to: QRPLLFTVTSNSNTG*APLIFVGGYQPLLC Trigger: GCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAGCAATGGCCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 90 bp | ATCTCAGAACCGCTGGGAAGGAAGCTCTTGAGCCGTATCTCTCCTTaGACGTCCACCTTCAACAACGAGCCATTAGATGCAATCAGTACA | + |
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Preference number: 1 (lower is better) Translates to: ISEPLGRKLLSRISP*TSTFNNEPLDAIST Trigger: TGTACTGATTGCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGTTCTGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR TCA 90 bp | TGCTTCAGCTCAAGTGCTGTGTCCAGAGGCCATTGCTTTTCACTGTaGCTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: CFSSSAVSRGHCFSL*LLTVTLDGLLSSLW Trigger: CCACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAGCAATGGCCTCTGGACACAGCACTTGAGCTGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR GCA 90 bp | CCGTATCTCTCCTTGGACGTCCACCTTCAACAACGAGCCATTAGATaGAATCAGTACAGACAGTCTCTCCACCACATCCAAAAACACCTC | + |
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Preference number: 1 (lower is better) Translates to: PYLSLDVHLQQRAIR*NQYRQSLHHIQKHL Trigger: GAGGTGTTTTTGGATGTGGTGGAGAGACTGTCTGTACTGATTGCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR GCA 90 bp | CCATATCCTTGCTTGGGGAGCTTCAAATCCGAATTACGTAGGCGTTaGTGTGGCTTAGATGTCGAACCCACTTGTGAGGATTGGCATTAC | + |
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Preference number: 1 (lower is better) Translates to: PYPCLGSFKSELRRR*CGLDVEPTCEDWHY Trigger: GTAATGCCAATCCTCACAAGTGGGTTCGACATCTAAGCCACAGCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR GCA 90 bp | GTCCAGGTCCAAAGCCACAAAGAAAATGTCCTCTTCCTGTTCAACTaGCTGCTCACATTGCTGTCCATATCCTTGCTTGGGGAGCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: VQVQSHKENVLFLFN*LLTLLSISLLGELQ Trigger: TTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACAGGAAGAGGACATTTTCTTTGTGGCTTTGGACCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR GCA 90 bp | GTGATGCCCCTGGGGAAACCTCCAAGCTGTAACCTAATCCCTTCATaGTCAAACTCGGACAGCATAAGAGCTACTTCTCAGTATCTTAGA | + |
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Preference number: 1 (lower is better) Translates to: VMPLGKPPSCNLIPS*SNSDSIRATSQYLR Trigger: TCTAAGATACTGAGAAGTAGCTCTTATGCTGTCCGAGTTTGAGCATGAAGGGATTAGGTTACAGCTTGGAGGTTTCCCCAGGGGCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCGGAGAGTTGAGAGCCTCCTTGTACCCGGGGCAGATCCCAGTGAAGGGCCAGCTCGCCCTGAGGTaGCTGCAGGCGGAGGATCCG | + |
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Preference number: 2 (lower is better) Translates to: KAGELRASLYPGQIPVKGQLALR*LQAEDP Trigger: CGGATCCTCCGCCTGCAGCCACCTCAGGGCGAGCTG...GCCCTTCACTGGGATCTGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR TCA 90 bp | GGACATCCATCTGGAAAAGGCCGGAGAGTTGAGAGCCTCCTTGTACCCGGGGCAACAGTCAGCTCGCCCTaGGGTGGCTGCAGGCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GHPSGKGRRVESLLVPGATVSSP*GGCRRR Trigger: CCTCCGCCTGCAGCCACCTCAGGGCGAGCTGACTGT...TGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CAA 90 bp | GGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCCATTGCCTaGCCTGTTCAGACACTGGTGTCTGCGAGAGCTGCTGCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: GPRTPGLLKVPGSIA*PVQTLVSARAAAPP Trigger: AGGAGGAGCAGCAGCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | ACCCTTTCACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATaGAAGGTCCCTGGCTCCATTGCCTTGCCTGTTCAGACACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TLSQAPQPGPRTPGL*KVPGSIALPVQTLV Trigger: CACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | AAGTCCCTGCAAGCCAGGGACATCCATCTGGAAAAGGCCGGAGAGTaGAGAGCCTCCTTGTACCCGGGGCAGATCCCAGTGAAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: KSLQARDIHLEKAGE*RASLYPGQIPVKGS Trigger: GGAGCCCTTCACTGGGATCTGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTGCAGGGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGGATGCCTACCGGGGAGAATTTGGGTCCCTTGGGCCCCTTCTCTGTTCCCAGTCTGCGAGAGCTGCTaGTCCTCCTCAGCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SGCLPGRIWVPWAPSLFPVCESC*SSSAFS Trigger: GGAGAAGGCTGAGGAGGAGCAGCAGCTCTCGCAGAC...TGGGAACAGAGAAGGGGCCCAAGGGACCCAAATTCTCCCCGGTAGGCATCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCACGCAGTCTCAGGGAGCTaGACCTCTCCCACGCCCAAT | + |
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Preference number: 2 (lower is better) Translates to: GPGCSTSSAGQQDHTHHHAVSGS*TSPTPN Trigger: ATTGGGCGTGGGAGAGGTCCAGCTCCCTGAGACTGC...GTGATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | TCTGGTCAGAACGACTGGACAGGACAGGGCGGCTGGCTGCGCTGCTaGGGGCCACTTTATTCTGCTGTGTCTCTGCCCCGAACAATCCAA | + |
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Preference number: 2 (lower is better) Translates to: SGQNDWTGQGGWLRC*GPLYSAVSLPRTIQ Trigger: TTGGATTGTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTCCAGTCGTTCTGACCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR GCA 90 bp | GCCCCAAGGGAGAAGGTCCATGGTTGGGAAGTCCCTGCAAGCCAGGGACATCCAGGGGCCACTTTATTCTaGTGTGTCTCTGCCCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: APREKVHGWEVPASQGHPGATLF*CVSAPN Trigger: GTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCC...TGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCAAGGGAGAAGGTCCATGGTTGGGAAGTCCCTGCAAGCCAGGGACATCCAAGGGGAAGGTGCAGATaGATGTTGAGAGCTTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: APREKVHGWEVPASQGHPRGRCR*MLRAWL Trigger: GAGCCAAGCTCTCAACATTCATCTGCACCTTCCCCT...TGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGGACAACATGACCCTAGACCCTCCTTTCTCGCTCAGGTTCTGTCCCTCGCAGCCTACTGGACCTaGCTCTCCCCAGCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: KQGQHDPRPSFLAQVLSLAAYWT*LSPACS Trigger: AGAGCAGGCTGGGGAGAGCCAGGTCCAGTAGGCTGC...GAGGGACAGAACCTGAGCGAGAAAGGAGGGTCTAGGGTCATGTTGTCCTTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR TCA 90 bp | GGACATCCATCTGGAAAAGGCCGGAGAGTTGAGAGCCTCCTTGTACCCGGGGCATGGGAAGGAAGCTCTTaGGCCGTATCTCTCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GHPSGKGRRVESLLVPGAWEGSS*AVSLLG Trigger: TCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCA...TGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTTGTGAGGATTGGCATTACCACAGGCACTAAAGGACAGTCTGAGGAATCGAACCTGGAGCCGGCCTaGGCCTTGGTCCCACTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PLVRIGITTGTKGQSEESNLEPA*ALVPLH Trigger: GTGCAGTGGGACCAAGGCTCAGGCCGGCTCCAGGTT...CGATTCCTCAGACTGTCCTTTAGTGCCTGTGGTAATGCCAATCCTCACAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACACTGTGCCCCCACGGTTCCCAGCGTaGAGCCCATCGTCAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FVGGYQPLLCLLYRNTVPPRFPA*SPSSSW Trigger: CCAGCTTGACGATGGGCTGCACGCTGGGAACCGTGG...GGGCACAGTGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCCAGTGCCTCATCAACCCAGCAGGTATGTGGAGCCAGGGTGAGGGGTGTCACTCAAACAACCTGTaGGGGAGGAAGGAGGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IFQCLINPAGMWSQGEGCHSNNL*GRKEER Trigger: CCTTTCCTCCTTCCTCCCTCACAGGTTGTTTGAGTG...ACACCCCTCACCCTGGCTCCACATACCTGCTGGGTTGATGAGGCACTGGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCTTATTGAAGGTCCCTaGCTCCATTGCCTTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QGPGCSTSSAGQQDHTHHLIEGP*LHCLAC Trigger: ACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAG...ATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR-3UTR GCA 90 bp | TTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACACTGTGCCCCCCAAGCACAGCCCCTaGTGGTTCTGGCAGTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FVGGYQPLLCLLYRNTVPPKHSP*WFWQCS Trigger: TGAACACTGCCAGAACCAGCAGGGGCTGTGCTTGGG...GGGCACAGTGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | ACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGAGCCCCTGCTGGTTCTaGCAGTGTTCAGAAATACAT | + |
|
Preference number: 2 (lower is better) Translates to: TTTSPVTTTVPSVQPIVKSPCWF*QCSEIH Trigger: ATGTATTTCTGAACACTGCCAGAACCAGCAGGGGCT...CTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCAACTGCCTGCTCACATTGCTGTCCATATCCTTGCTTGGGGAGCTTCAAGGACTGCTCAGTTCCTaGGACAGGCTGATGACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: LFNCLLTLLSISLLGELQGLLSS*DRLMTP Trigger: AGGGGTCATCAGCCTGTCTCAGGAACTGAGCAGTCC...TTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGATGGCTCTCCCCAGCCTaGTCTGTGATGTGTCACATG | + |
|
Preference number: 2 (lower is better) Translates to: WEWRACVNSRYLEKDSGGWLSPA*SVMCHM Trigger: CATGTGACACATCACAGAGCAGGCTGGGGAGAGCCA...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | ACCACATCCAAAAACACCTCATTCTTTTGGCTCTGGTCAGAACGACTGGACAGGGGCGGCTGGCTGCGCTaGTTGGGGCCACTTTATTCT | + |
|
Preference number: 2 (lower is better) Translates to: TTSKNTSFFWLWSERLDRGGWLR*LGPLYS Trigger: AGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCC...CCTGTCCAGTCGTTCTGACCAGAGCCAAAAGAATGAGGTGTTTTTGGATGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGAGCCCATCGTCAAGCTaGTCTCCACTGCTACCACTG | + |
|
Preference number: 2 (lower is better) Translates to: RWEWRACVNSRYLEKDSGSPSSS*SPLLPL Trigger: CAGTGGTAGCAGTGGAGACCAGCTTGACGATGGGCT...CCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGACAGCACCTCAGCTCCTaGCTCAGGCTCTACTACTAC | + |
|
Preference number: 2 (lower is better) Translates to: WEWRACVNSRYLEKDSGGQHLSS*LRLYYY Trigger: GTAGTAGTAGAGCCTGAGCCAGGAGCTGAGGTGCTG...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGCTCCACTGCTACCACTaGACCCCCAAGCACAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVLHCYH*TPKHSP Trigger: GGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAG...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | CATGGTTGGGAAGTCCCTGCAAGCCAGGGACATCCATCTGGAAAAGGCCGGAGAAACACCTCATTCTTTTaGCTCTGGTCAGAACGACTG | + |
|
Preference number: 2 (lower is better) Translates to: HGWEVPASQGHPSGKGRRNTSFF*LWSERL Trigger: CAGTCGTTCTGACCAGAGCCAAAAGAATGAGGTGTT...TCTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CAA 90 bp | AGAGCTACTTCTCAGTATCTTAGAGGCCTCAAGCTAGCAGCAGTCTaGACCATCCATTCACTGGGGACTACAAGGGAAGGTGGGAGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RATSQYLRGLKLAAV*TIHSLGTTREGGSG Trigger: TCCACTCCCACCTTCCCTTGTAGTCCCCAGTGAATGGATGGTCAAGACTGCTGCTAGCTTGAGGCCTCTAAGATACTGAGAAGTAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR-3UTR TCA 90 bp | GTCCATATCCTTGCTTGGGGAGCTTCAAATCCGAATTACGTAGGCGTTGCTGTGGGTGCAGATGAATGTTaGGAGCTTGGCTCTTTGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VHILAWGASNPNYVGVAVGADEC*ELGSLG Trigger: CCCCAAAGAGCCAAGCTCTCAACATTCATCTGCACC...CACAGCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGATATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR CCA 90 bp | CTGTTCAACTGCCTGCTCACATTGCTGTCCATATCCTTGCTTGGGGAGCTTCAAAAGGGAGAAGGTCCATaGTTGGGAAGTCCCTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LFNCLLTLLSISLLGELQKGEGP*LGSPCK Trigger: CTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTT...TTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CAA 90 bp | TATCTCAGAACCGCTGGGAAGGAAGCTCTTGAGCCGTATCTCTCCTaGGACGTCCACCTTCAACAACGAGCCATTAGATGCAATCAGTAC | + |
|
Preference number: 2 (lower is better) Translates to: YLRTAGKEALEPYLS*DVHLQQRAIRCNQY Trigger: GTACTGATTGCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGTTCTGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGCAAGCTGGTCTCCACTaGTACCACTGCACCCCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVQAGLH*YHCTPK Trigger: CTTGGGGGTGCAGTGGTAGCAGTGGAGACCAGCTTG...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGCAGTACTGGCCAAGCTaGGCCCTCCACCTGACAATC | + |
|
Preference number: 2 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVQYWPS*ALHLTI Trigger: GATTGTCAGGTGGAGGGCGCAGCTTGGCCAGTACTG...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGAACCCAGCAGGTATGTaGAGCCAGGGTGAGGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVNPAGM*SQGEGC Trigger: ACACCCCTCACCCTGGCTCCACATACCTGCTGGGTT...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTCTTAGGCCCTCGCACGCCTaGCTTATTGAAGGTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SGSGLPSMLTFSSCVCSLRPSHA*LIEGPW Trigger: CCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCT...AAGAGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | TCTTCCTGTTCAACTGCCTGCTCACATTGCTGTCCATATCCTTGCTaGGGGAGCTTCAAATCCGAATTACGTAGGCGTTGCTGTGGCTTA | + |
|
Preference number: 2 (lower is better) Translates to: SSCSTACSHCCPYPC*GSFKSELRRRCCGL Trigger: TAAGCCACAGCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR GCA 90 bp | GAATTACGTAGGCGTTGCTGTGGCTTAGATGTCGAACCCACTTGTGAGGATTGGATTCTGCTGTGTCTCTaGCCCGAACAATCCAACACT | + |
|
Preference number: 2 (lower is better) Translates to: ELRRRCCGLDVEPTCEDWILLCL*PEQSNT Trigger: AGTGTTGGATTGTTCGGGGCAGAGACACAGCAGAAT...CCAATCCTCACAAGTGGGTTCGACATCTAAGCCACAGCAACGCCTACGTAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTTTCACCATCCCCACTTaGGGGAAGTACCCTCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WSGSGLPSMLTFSSCVCSFTIPT*GKYPLW Trigger: CCACAGAGGGTACTTCCCCCAAGTGGGGATGGTGAA...AGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGGAAGAGCTAGCTACCTaGAGTGGCTCAGGTCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVEELAT*SGSGLP Trigger: AGGCAGACCTGAGCCACTCCAGGTAGCTAGCTCTTC...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTCAGAATAAAAGTTGGATTTGTAAGTTTGTGAGCCTCCCGCATCACATACCCCAGCCTGCTCTGTaGTGTGTCACATGTGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: VPQNKSWICKFVSLPHHIPQPAL*CVTCAD Trigger: GTCAGCACATGTGACACATCACAGAGCAGGCTGGGG...TATGTGATGCGGGAGGCTCACAAACTTACAAATCCAACTTTTATTCTGAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | AGGTGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGTTCAGAAATACATTGTaGTCTCTCTTCCCCCAACAG | + |
|
Preference number: 2 (lower is better) Translates to: RWEWRACVNSRYLEKDSGFRNTL*SLFPQQ Trigger: CTGTTGGGGGAAGAGAGACCACAATGTATTTCTGAA...CCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTAAGCACAGCCCCTGCTaGTTCTGGCAGTGTTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: WSGSGLPSMLTFSSCVCSKHSPC*FWQCSE Trigger: TTCTGAACACTGCCAGAACCAGCAGGGGCTGTGCTT...AGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCACTGCCTGCTCACATTaGTGTCCATATCCTTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFTACSH*CPYPCL Trigger: CAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGT...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | GTTCCTCAGAATAAAAGTTGGATTTGTAAGTTTGTGAGCCTCCCGCATCACATACTGGCTCCATTGCCTTaGCTGTTCAGACACTGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: VPQNKSWICKFVSLPHHILAPLP*LFRHWC Trigger: ACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAG...TATGTGATGCGGGAGGCTCACAAACTTACAAATCCAACTTTTATTCTGAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCAACCTAATCCCTTCATaGTCAAACTCGGACAGCATA | + |
|
Preference number: 2 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFNLIPS*SNSDSI Trigger: TATGCTGTCCGAGTTTGAGCATGAAGGGATTAGGTT...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | TTGTTGTTATGCTGCTGGGAATTGAACTTGGGGCCATATACTTGTTaGCAAAGCATTCTACCAATGACGCTATATTCTCCTTGGCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLCCWELNLGPYTC*QSILPMTLYSPWPF Trigger: AAAGGGCCAAGGAGAATATAGCGTCATTGGTAGAATGCTTTGCAAACAAGTATATGGCCCCAAGTTCAATTCCCAGCAGCATAACAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CAA 90 bp | CTTTTTGTTGTTATGCTGCTGGGAATTGAACTTGGGGCCATATACTaGTTTGCAAAGCATTCTACCAATGACGCTATATTCTCCTTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LFVVMLLGIELGAIY*FAKHSTNDAIFSLA Trigger: GGCCAAGGAGAATATAGCGTCATTGGTAGAATGCTTTGCAAACAAGTATATGGCCCCAAGTTCAATTCCCAGCAGCATAACAACAAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTCAGAATAAAAGTTGGATTTGTAAGTTTGTGAGCCTCCCGCATCACATACAAACTCATCTAGATTaGCAGAACTATGGAATGACA | + |
|
Preference number: 2 (lower is better) Translates to: VPQNKSWICKFVSLPHHIQTHLD*QNYGMT Trigger: TGTCATTCCATAGTTCTGTCAATCTAGATGAGTTTG...TATGTGATGCGGGAGGCTCACAAACTTACAAATCCAACTTTTATTCTGAGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 72 bp | CCTTTCACAGGCCCCTCAGCCAGGCCCTCGCACGCCTaGCTTATTGAAGGTCCCTGGCTCCATTGCCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFTGPSARPSHA*LIEGPWLHCLA Trigger: GGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR CCA 72 bp | GGCTCTGGTCAGAACGACTGGACAGGACAGGGCGGCTaGCTGCGCTGCTTGGGGCCACTTTATTCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GSGQNDWTGQGG*LRCLGPLYSAV Trigger: CACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTCCAGTCGTTCTGACCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 72 bp | AGGCTGGCAGGACCCAGCCCCAAGGGAGAAGGTCCATaGTTGGGAAGTCCCTGCAAGCCAGGGACATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: RLAGPSPKGEGP*LGSPCKPGTSI Trigger: GATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGCTGGGTCCTGCCAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
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| 3UTR CCA 72 bp | CGGAGCATGTGTGCCGAGGGAGTTCAAAGGAGAGGCTaGCAGGACCCAGCCCCAAGGGAGAAGGTCCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSMCAEGVQRRG*QDPAPREKVHG Trigger: ACCATGGACCTTCTCCCTTGGGGCTGGGTCCTGCCAGCCTCTCCTTTGAACTCCCTCGGCACACATGCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR TCA 72 bp | TCCTGTGTCTGTTCTCTTCATAGCCTCGGCCCACACTaGCCCTTTCACAGGCCCCTCAGCCAGGCCCTCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SCVCSLHSLGPH*PFHRPLSQALA Trigger: TGCGAGGGCCTGGCTGAGGGGCCTGTGAAAGGGTCAGTGTGGGCCGAGGCTATGAAGAGAACAGACACAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
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| 3UTR TCA 72 bp | CTGTGCCCCAGTACTGGCCAAGCTGCGCCCTCCACCTaGCAATCAGGATGCCTACCGGGGAGAATTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LCPSTGQAAPST*QSGCLPGRIWV Trigger: GACCCAAATTCTCCCCGGTAGGCATCCTGATTGTCAGGTGGAGGGCGCAGCTTGGCCAGTACTGGGGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | GGGCGGCTGGCTGCGCTGCTTGGGGCCACTTTATTCTaGTGTGTCTCTGCCCCGAACAATCCAACACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GRLAALLGATLF*CVSAPNNPTLL Trigger: CAGCAGTGTTGGATTGTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | CTGGTCAGAACGACTGGACAGGACAGGGCGGCTGGCTaGGCTGCTTGGGGCCACTTTATTCTGCTGTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVRTTGQDRAAG*AAWGHFILLCL Trigger: GAGACACAGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCCCTGTCCTGTCCAGTCGTTCTGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CCA 72 bp | GCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTaGCTCCATTGCCTTGCCTGTTCAGACACTGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ARPSHAWLIEGP*LHCLACSDTGV Trigger: GACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CCA 72 bp | TGGCAGGACCCAGCCCCAAGGGAGAAGGTCCATGGTTaGGAAGTCCCTGCAAGCCAGGGACATCCATCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: WQDPAPREKVHG*EVPASQGHPSG Trigger: TCCAGATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGCTGGGTCCTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | CTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTaGAGCCCATCGTCAAGCTGGTCTCCACTGCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLPLLSPPRFPA*SPSSSWSPLLP Trigger: TGGTAGCAGTGGAGACCAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | AGCCCCAAGGGAGAAGGTCCATGGTTGGGAAGTCCCTaGAAGCCAGGGACATCCATCTGGAAAAGGCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPKGEGPWLGSP*KPGTSIWKRPE Trigger: CTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | AGTCTGAGGAATCGAACCTGGAGACCGGAGCATGTGTaGCGAGGGAGTTCAAAGGAGAGGCTGGCAGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: SLRNRTWRPEHV*RGSSKERLAGP Trigger: GGGTCCTGCCAGCCTCTCCTTTGAACTCCCTCGGCACACATGCTCCGGTCTCCAGGTTCGATTCCTCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CCA 72 bp | AGGTCCCTGGCTCCATTGCCTTGCCTGTTCAGACACTaGTGTCTGCGAGAGCTGCTGCTCCTCCTCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSLAPLPCLFRH*CLRELLLLLSL Trigger: AAGGCTGAGGAGGAGCAGCAGCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR TCA 72 bp | CAGCCTACTGGACCTGGCTCTCCCCAGCCTGCTCTGTaGTGTGTCACATGTGCTGACCTCCTCTCTTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPTGPGSPQPAL*CVTCADLLSCA Trigger: TGCACAAGAGAGGAGGTCAGCACATGTGACACATCACAGAGCAGGCTGGGGAGAGCCAGGTCCAGTAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR TCA 72 bp | CCACTGCACAGAGGGAAAGAGCCGGAAGGGGAGTGGTaGGGGGAGGTCATCAGAGAGCTGGTATCTCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLHRGKEPEGEW*GEVIRELVSHH Trigger: GTGATGAGATACCAGCTCTCTGATGACCTCCCCTCACCACTCCCCTTCCGGCTCTTTCCCTCTGTGCAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | TCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCCATTaGCTTGCCTGTTCAGACACTGGTGTCTGCGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SHAWLIEGPWLH*LACSDTGVCES Trigger: GCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | TCTCTGTTCCCATGTGGTGAAGGCCAGGGCCCAGGCTaGTCTACAAGCTCAGCAGGTCAACAGGACCACACT | + |
|
Preference number: 3 (lower is better) Translates to: SLFPCGEGQGPG*STSSAGQQDHT Trigger: AGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTGGCCTTCACCACATGGGAACAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CCA 72 bp | CAATCAGGATGCCTACCGGGGAGAATTTGGGTCCCTTaGGCCCCTTCTCTGTTCCCATGTGGTGAAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSGCLPGRIWVP*APSLFPCGEGQ Trigger: CTGGCCTTCACCACATGGGAACAGAGAAGGGGCCCAAGGGACCCAAATTCTCCCCGGTAGGCATCCTGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CCA 72 bp | GAGCTGGTATCTCATCACAGTCAGCTCGCCCTGAGGTaGCTGCAGGCGGAGGATCCGATGAGACTCAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ELVSHHSQLALR*LQAEDPMRLKL Trigger: GAGTTTGAGTCTCATCGGATCCTCCGCCTGCAGCCACCTCAGGGCGAGCTGACTGTGATGAGATACCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | CTCCACTGCTACCACTGCACCCCCAAGCACAGCCCCTaGTGGTTCTGGCAGTGTTCAGAAATACATTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LHCYHCTPKHSP*WFWQCSEIHCG Trigger: ACCACAATGTATTTCTGAACACTGCCAGAACCAGCAGGGGCTGTGCTTGGGGGTGCAGTGGTAGCAGTGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CCA 72 bp | CCACAGGCACTAAAGGACAGTCTGAGGAATCGAACCTaGAGACCGGAGCATGTGTGCCGAGGGAGTTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQALKDSLRNRT*RPEHVCRGSSK Trigger: CTTTGAACTCCCTCGGCACACATGCTCCGGTCTCCAGGTTCGATTCCTCAGACTGTCCTTTAGTGCCTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGAACTGCCTGCTCACATaGCTGTCCATATCCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TTTSPVTTTVPSVQPIVKNCLLT*LSISLL Trigger: AAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTT...CTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CCA 72 bp | CCGCTGGGAAGGAAGCTCTTGAGCCGTATCTCTCCTTaGACGTCCACCTTCAACAACGAGCCATTAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: PLGRKLLSRISP*TSTFNNEPLDA Trigger: TGCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACCTCATCAACTCGAATCCCTGGCCCATAACCTCTCAGTTCTGACTTTCCAAGGCTGGCTGCGCTGCTaGGGGCCACTTTATTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TPHQLESLAHNLSVLTFQGWLRC*GPLYSA Trigger: AGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCC...TTGGAAAGTCAGAACTGAGAGGTTATGGGCCAGGGATTCGAGTTGATGAGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | CCTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTaGCTTCTCTACAGAAACACTGTGCCCCAGTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PLIFVGGYQPLL*LLYRNTVPQYW Trigger: CCAGTACTGGGGCACAGTGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCAGGTCCCTGGCTCCATaGCCTTGCCTGTTCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFRSLAP*PCLFRH Trigger: GTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCT...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR-3UTR CAA 90 bp | CCACTTGTGAGGATTGGCATTACCACAGGCACTAAAGGACAGTCTGAGGAATCGAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PLVRIGITTGTKGQSEESKRLKG*LTTASV Trigger: AACTGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...CGATTCCTCAGACTGTCCTTTAGTGCCTGTGGTAATGCCAATCCTCACAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR TCA 72 bp | CAATGCATATCTCAGAACCGCTGGGAAGGAAGCTCTTaGGCCGTATCTCTCCTTGGACGTCCACCTTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: QCISQNRWEGSS*AVSLLGRPPST Trigger: TGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGTTCTGAGATATGCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | TGCTTGGGGAGCTTCAAATCCGAATTACGTAGGCGTTaGTGTGGCTTAGATGTCGAACCCACTTGTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CLGSFKSELRRR*CGLDVEPTCED Trigger: ATCCTCACAAGTGGGTTCGACATCTAAGCCACAGCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CCA 72 bp | CTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTaGGAGGATACCAGCCCTTACTCTGCCTTCTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LTVTLDGLLSSL*EDTSPYSAFST Trigger: TGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR TCA 72 bp | TCAAGTGCTGTGTCCAGAGGCCATTGCTTTTCACTGTaGCTTCTAACAGTAACACTGGATGGGCTCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SSAVSRGHCFSL*LLTVTLDGLLS Trigger: TGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAGCAATGGCCTCTGGACACAGCACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | CTGGGGAAACCTCCAAGCTGTAACCTAATCCCTTCATaGTCAAACTCGGACAGCATAAGAGCTACTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LGKPPSCNLIPS*SNSDSIRATSQ Trigger: CTGAGAAGTAGCTCTTATGCTGTCCGAGTTTGAGCATGAAGGGATTAGGTTACAGCTTGGAGGTTTCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | TCCAACCAAGTTTATTGTAATGTCCTCATCTTCCAGTaGCTCATCAACCCAGCAGGTATGTGGAGCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SNQVYCNVLIFQ*LINPAGMWSQG Trigger: ACCCTGGCTCCACATACCTGCTGGGTTGATGAGGCACTGGAAGATGAGGACATTACAATAAACTTGGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR GCA 72 bp | TCCTTGGACGTCCACCTTCAACAACGAGCCATTAGATaGAATCAGTACAGACAGTCTCTCCACCACATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLDVHLQQRAIR*NQYRQSLHHIQ Trigger: TTGGATGTGGTGGAGAGACTGTCTGTACTGATTGCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR GCA 72 bp | TGTTCAACTGCCTGCTCACATTGCTGTCCATATCCTTaGTTGGGGAGCTTCAAATCCGAATTACGTAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CSTACSHCCPYP*LGSFKSELRRR Trigger: ACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR TCA 72 bp | GGCGGAGGATCCGATGAGACTCAAACTCATCTAGATTaGCAGAACTATGGAATGACACCTCATCAACTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGGSDETQTHLD*QNYGMTPHQLE Trigger: TTCGAGTTGATGAGGTGTCATTCCATAGTTCTGTCAATCTAGATGAGTTTGAGTCTCATCGGATCCTCCGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCTCAGAATAAAAGTTGGATTTGTAAGTTTGTGAGCCTCCCGCATCACATAAACTGCCTGCTCACATaGCTGTCCATATCCTTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: VPQNKSWICKFVSLPHHINCLLT*LSISLL Trigger: AAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTT...TATGTGATGCGGGAGGCTCACAAACTTACAAATCCAACTTTTATTCTGAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000143241.8 |
||
| 3UTR TCA 72 bp | ATCAACTCGAATCCCTGGCCCATAACCTCTCAGTTCTaGCTTTCCAACACAAAATTCTTCTGTCAAGCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: INSNPWPITSQF*LSNTKFFCQAN Trigger: ATTGGCTTGACAGAAGAATTTTGTGTTGGAAAGTCAGAACTGAGAGGTTATGGGCCAGGGATTCGAGTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCCCGGAAGGGGAGTGGTaGGGGGAGGTCATCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGPSARPSHAWLIEGPWLPEGEW*GEVIRE Trigger: CTCTCTGATGACCTCCCCTCACCACTCCCCTTCCGG...GAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | CAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATaGAAGGTCCCTGGCTCCATTGCCTTGCCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAPQPGPRTPGL*KVPGSIALPVQ Trigger: CTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | CTGGCAGGACCCAGCCCCAAGGGAGAAGGTCCATGGTaGGGAAGTCCCTGCAAGCCAGGGACATCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGPSPKGEGPW*GSPCKPGTSIW Trigger: CCAGATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTTGGGGCTGGGTCCTGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAATGGCTCGCAGCCTACTGGACCTGGCTCTCCCCAGCCTGCTCTGTGATGGCGGCTGGCTGCGCTaGTTGGGGCCACTTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLMARSLLDLALPSLLCDGGWLR*LGPLYS Trigger: AGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCCGCC...ATCACAGAGCAGGCTGGGGAGAGCCAGGTCCAGTAGGCTGCGAGCCATTAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | ACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGGGACTGCTCAGTTCCTaGGACAGGCTGATGACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSPVTTTVPSVQPIVKLGLLSS*DRLMTP Trigger: AGGGGTCATCAGCCTGTCTCAGGAACTGAGCAGTCC...CAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | ACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGCCCAGCTCTGCCTTCTaGTCTGGACTGCTCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTSPVTTTVPSVQPIVKLPSSAF*SGLLSS Trigger: GGAACTGAGCAGTCCAGATCAGAAGGCAGAGCTGGG...CAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | ACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGAAAAGGCCGGAGAGTTaGGAGCCTCCTTGTACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSPVTTTVPSVQPIVKLKRPES*EPPCTR Trigger: CCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTT...CAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | CAAGCCAGGGACATCCATCTGGAAAAGGCCGGAGAGTaGAGAGCCTCCTTGTACCCGGGGCAGATCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QARDIHLEKAGE*RASLYPGQIPV Trigger: CACTGGGATCTGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTGCTGGTTCTGGCAGTGTTCAGAAATACATTGTGGTCTCTCTTCCCCCAAACAGTCAGCTCGCCCTaGGGTGGCTGCAGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLLVLAVFRNTLWSLFPQTVSSP*GGCRRR Trigger: CCTCCGCCTGCAGCCACCTCAGGGCGAGCTGACTGT...TTGGGGGAAGAGAGACCACAATGTATTTCTGAACACTGCCAGAACCAGCAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGACAGCTCGCCCTGAGGTaGCTGCAGGCGGAGGATCCG | + |
|
Preference number: 4 (lower is better) Translates to: WEWRACVNSRYLEKDSGGQLALR*LQAEDP Trigger: CGGATCCTCCGCCTGCAGCCACCTCAGGGCGAGCTG...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | CATCACAGTCAGCTCGCCCTGAGGTGGCTGCAGGCGGAGGATCCGATGAGACTCGCAGCTCCAGAAGGCTaGAAGGAGAGACGTTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: HHSQLALRWLQAEDPMRLAAPEG*KERRFL Trigger: TAGAAAACGTCTCTCCTTTCAGCCTTCTGGAGCTGC...GAGTCTCATCGGATCCTCCGCCTGCAGCCACCTCAGGGCGAGCTGACTGTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CAA 72 bp | ATCCATCTGGAAAAGGCCGGAGAGTTGAGAGCCTCCTaGTACCCGGGGCAGATCCCAGTGAAGGGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLEKAGELRAS*YPGQIPVKGSF Trigger: GAAGGAGCCCTTCACTGGGATCTGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | ACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGGCAGCTCCAGAAGGCTaGAAGGAGAGACGTTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TTSPVTTTVPSVQPIVKLAAPEG*KERRFL Trigger: TAGAAAACGTCTCTCCTTTCAGCCTTCTGGAGCTGC...CAGCTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATGGTTCCCTCATTGAGTaGGCCACAGTAGTCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPGCSTSSAGQQDHTHHGSLIE*ATVVTQ Trigger: TTGGGTGACTACTGTGGCTCACTCAATGAGGGAACC...ATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR GCA 90 bp | CATGGTTGGGAAGTCCCTGCAAGCCAGGGACATCCATCTGGAAAAGGCCGGAGACCGGTAGAAGAGCTCTaGCACATCACGACCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: HGWEVPASQGHPSGKGRRPVEEL*HITTTT Trigger: AGTGGTGGTCGTGATGTGGCAGAGCTCTTCTACCGG...TCTCCGGCCTTTTCCAGATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CAA 72 bp | ACGCCTGGCTTATTGAAGGTCCCTGGCTCCATTGCCTaGCCTGTTCAGACACTGGTGTCTGCGAGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPGLLKVPGSIA*PVQTLVSARAA Trigger: AGCAGCTCTCGCAGACACCAGTGTCTGAACAGGCAAGGCAATGGAGCCAGGGACCTTCAATAAGCCAGGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | TCAGGATGCCTACCGGGGAGAATTTGGGTCCCTTGGGCCCCTTCTCTGTTCCCAGGAAGTCTTTATAGATaGGCGGATCCCCCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGCLPGRIWVPWAPSLFPGSLYR*ADPPWK Trigger: CTTCCAAGGGGGATCCGCTCATCTATAAAGACTTCC...TGGGAACAGAGAAGGGGCCCAAGGGACCCAAATTCTCCCCGGTAGGCATCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCACTGTCGAACCCACTTGTaGGGATTGGCATTACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGCSTSSAGQQDHTHHHCRTHL*GLALPQ Trigger: CTGTGGTAATGCCAATCCTCACAAGTGGGTTCGACA...GTGATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | GGTTCTGGCAGTGTTCAGAAATACATTGTGGTCTCTCTTCCCCCAACAGGGGAAAGCCGGCCTGAGCCTTaGTCCCACTGCACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSVQKYIVVSLPPTGESRPEP*SHCTEG Trigger: TCCCTCTGTGCAGTGGGACCAAGGCTCAGGCCGGCT...TTCCCCTGTTGGGGGAAGAGAGACCACAATGTATTTCTGAACACTGCCAGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | CGCCCTGAGGTGGCTGCAGGCGGAGGATCCGATGAGACTCAAACTCATCTAGATGGAAGTCTTTATAGATaGGCGGATCCCCCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEVAAGGGSDETQTHLDGSLYR*ADPPWK Trigger: CTTCCAAGGGGGATCCGCTCATCTATAAAGACTTCC...ATCTAGATGAGTTTGAGTCTCATCGGATCCTCCGCCTGCAGCCACCTCAGGGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCATAACCTCTCAGTTCTaGCTTTCCAACACAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TGPSARPSHAWLIEGPWLITSQF*LSNTKF Trigger: GAATTTTGTGTTGGAAAGTCAGAACTGAGAGGTTAT...GAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCAACCTGGAGCCGGCCTaGGCCTTGGTCCCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFNLEPA*ALVPLH Trigger: GTGCAGTGGGACCAAGGCTCAGGCCGGCTCCAGGTT...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR GCA 90 bp | GGTTCTGGCAGTGTTCAGAAATACATTGTGGTCTCTCTTCCCCCAACAGGGGAAGAGCCTTGGTCCCACTaGACAGAGGGAAAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGSVQKYIVVSLPPTGEEPWSH*TEGKSR Trigger: CCGGCTCTTTCCCTCTGTGCAGTGGGACCAAGGCTC...TTCCCCTGTTGGGGGAAGAGAGACCACAATGTATTTCTGAACACTGCCAGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATCACAGGTCATCAGAGAGCTaGTATCTCATCACAGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGCSTSSAGQQDHTHHHRSSES*YLITVS Trigger: GCTGACTGTGATGAGATACCAGCTCTCTGATGACCT...GTGATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | ACCGCTGGGAAGGAAGCTCTTGAGCCGTATCTCTCCTaGGACGTCCACCTTCAACAACGAGCCATTAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TAGKEALEPYLS*DVHLQQRAIRC Trigger: GCATCTAATGGCTCGTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGAGGGGCCACTTTATTCTaGTGTGTCTCTGCCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WEWRACVNSRYLEKDSGGGATLF*CVSAPN Trigger: GTTCGGGGCAGAGACACAGCAGAATAAAGTGGCCCC...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | CATCCATCTGGAAAAGGCCGGAGAGTTGAGAGCCTCCTTGTACCCGGGGCAGATCGTTTTCTAAGGTTGTaGCCACCAAATAGAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPSGKGRRVESLLVPGADRFLRL*PPNRAH Trigger: GTGGGCTCTATTTGGTGGCCACAACCTTAGAAAACG...ATCTGCCCCGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTCCAGATGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| 3UTR CAA 72 bp | CCAATGCATATCTCAGAACCGCTGGGAAGGAAGCTCTaGAGCCGTATCTCTCCTTGGACGTCCACCTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PMHISEPLGRKL*SRISPWTSTFN Trigger: GTTGAAGGTGGACGTCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAGCGGTTCTGAGATATGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGAGGTGCAGATGAATGTTaGGAGCTTGGCTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: WEWRACVNSRYLEKDSGGGADEC*ELGSLG Trigger: CCCCAAAGAGCCAAGCTCTCAACATTCATCTGCACC...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGAGGGGAAGGTGCAGATaGATGTTGAGAGCTTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RWEWRACVNSRYLEKDSGRGRCR*MLRAWL Trigger: GAGCCAAGCTCTCAACATTCATCTGCACCTTCCCCT...CCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | ACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGACCACAGCTTCAGTTTaGATGAAGTTCCTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TTTSPVTTTVPSVQPIVKTTASV*MKFLSI Trigger: AATGCTGAGGAACTTCATCCAAACTGAAGCTGTGGT...CTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | AGGTCAGCTGCTGAGGGAGGAAATGTACCCAGGTTTGGGATAGCGTTTGTCATACTGAGGAATCGAACCTaGAGACCGGAGCATGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAAEGGNVPRFGIAFVILRNRT*RPEHVC Trigger: GCACACATGCTCCGGTCTCCAGGTTCGATTCCTCAG...TATGACAAACGCTATCCCAAACCTGGGTACATTTCCTCCCTCAGCAGCTGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR GCA 90 bp | CTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACACCGGTAGAAGAGCTCTaGCACATCACGACCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: LSSLWEDTSPYSAFSTETPVEEL*HITTTT Trigger: AGTGGTGGTCGTGATGTGGCAGAGCTCTTCTACCGG...TGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTAATGGCTCGCAGCCTACTGGACCTGGCTCTCCCCAGCCTGCTCTGTGATAGATTGACAGAACTATaGAATGACACCTCATCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RLMARSLLDLALPSLLCDRLTEL*NDTSST Trigger: AGTTGATGAGGTGTCATTCCATAGTTCTGTCAATCT...ATCACAGAGCAGGCTGGGGAGAGCCAGGTCCAGTAGGCTGCGAGCCATTAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR GCA 90 bp | TTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACACTGTGCCCATTCTGCTGTGTCTCTaGCCCGAACAATCCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FVGGYQPLLCLLYRNTVPILLCL*PEQSNT Trigger: AGTGTTGGATTGTTCGGGGCAGAGACACAGCAGAAT...GGGCACAGTGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTGGTTGGGAAGTCCCTaGAAGCCAGGGACATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFWLGSP*KPGTSI Trigger: GATGGATGTCCCTGGCTTGCAGGGACTTCCCAACCA...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | CTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACAAAGGGAGAAGGTCCATaGTTGGGAAGTCCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSLWEDTSPYSAFSTETKGEGP*LGSPCK Trigger: CTTGCAGGGACTTCCCAACCATGGACCTTCTCCCTT...TGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | TCTCAGTATCTTAGAGGCCTCAAGCTAGCAGCAGTCTaGACCATCCATTCACTGGGGACTACAAGGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQYLRGLKLAAV*TIHSLGTTREG Trigger: ACCTTCCCTTGTAGTCCCCAGTGAATGGATGGTCAAGACTGCTGCTAGCTTGAGGCCTCTAAGATACTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | CTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTaGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTVTLDGLLSS*WEDTSPYSAFS Trigger: AGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | TCAACTGCCTGCTCACATTGCTGTCCATATCCTTGCTaGGGGAGCTTCAAATCCGAATTACGTAGGCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STACSHCCPYPC*GSFKSELRRRC Trigger: GCAACGCCTACGTAATTCGGATTTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGTGGGAAGGAAGCTCTTaGGCCGTATCTCTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVWEGSS*AVSLLG Trigger: TCCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCA...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR TCA 90 bp | AAGCAAGGACAACATGACCCTAGACCCTCCTTTCTCGCTCAGGTTCTGTCCCTCCAAACTCATCTAGATTaGCAGAACTATGGAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQGQHDPRPSFLAQVLSLQTHLD*QNYGMT Trigger: TGTCATTCCATAGTTCTGTCAATCTAGATGAGTTTG...GAGGGACAGAACCTGAGCGAGAAAGGAGGGTCTAGGGTCATGTTGTCCTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | TTCCTGCTTCAGCTCAAGTGCTGTGTCCAGAGGCCATaGCTTTTCACTGTGACTTCTAACAGTAACACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLLQLKCCVQRP*LFTVTSNSNTG Trigger: TCCAGTGTTACTGTTAGAAGTCACAGTGAAAAGCAATGGCCTCTGGACACAGCACTTGAGCTGAAGCAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | GAAAATGTCCTCTTCCTGTTCAACTGCCTGCTCACATaGCTGTCCATATCCTTGCTTGGGGAGCTTCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ENVLFLFNCLLT*LSISLLGELQI Trigger: GATTTGAAGCTCCCCAAGCAAGGATATGGACAGCAATGTGAGCAGGCAGTTGAACAGGAAGAGGACATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTCGTTTTCTAAGGTTGTaGCCACCAAATAGAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSGSGLPSMLTFSSCVCSRFLRL*PPNRAH Trigger: GTGGGCTCTATTTGGTGGCCACAACCTTAGAAAACG...AGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTCTTAGCCGTATCTCTCCTTaGACGTCCACCTTCAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSGLPSMLTFSSCVCSLSRISP*TSTFNN Trigger: GTTGTTGAAGGTGGACGTCCAAGGAGAGATACGGCT...AAGAGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCTAACACCTCATTCTTTTaGCTCTGGTCAGAACGACTG | + |
|
Preference number: 4 (lower is better) Translates to: WSGSGLPSMLTFSSCVCSNTSFF*LWSERL Trigger: CAGTCGTTCTGACCAGAGCCAAAAGAATGAGGTGTT...AGAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | TGCTGCTGGGAATTGAACTTGGGGCCATATACTTGTTaGCAAAGCATTCTACCAATGACGCTATATTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CCWELNLGPYTC*QSILPMTLYSP Trigger: AGGAGAATATAGCGTCATTGGTAGAATGCTTTGCAAACAAGTATATGGCCCCAAGTTCAATTCCCAGCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| 3UTR CAA 72 bp | GTTATGCTGCTGGGAATTGAACTTGGGGCCATATACTaGTTTGCAAAGCATTCTACCAATGACGCTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: VMLLGIELGAIY*FAKHSTNDAIF Trigger: GAATATAGCGTCATTGGTAGAATGCTTTGCAAACAAGTATATGGCCCCAAGTTCAATTCCCAGCAGCATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGCCCCTCAGCCAGGCCCTCGCACGCCTGGCTTATTGAAGGTCCCTGGCTCGAGTTGAGAGCCTCCTaGTACCCGGGGCAGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TGPSARPSHAWLIEGPWLELRAS*YPGQIP Trigger: TGGGATCTGCCCCGGGTACAAGGAGGCTCTCAACTC...GAGCCAGGGACCTTCAATAAGCCAGGCGTGCGAGGGCCTGGCTGAGGGGCCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS GCA 90 bp | GGACTCGCCTCCAGGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCTaGCACATCACGACCACCACTGTCCCCGCGGAAGTCTTTATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLASRQSRQLPVEEL*HITTTTVPAEVFID Trigger: ATCTATAAAGACTTCCGCGGGGACAGTGGTGGTCGTGATGTGGCAGAGCTCTTCTACCGGAAGCTGACGGGACTGCCTGGAGGCGAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019662.11 ENSMUST00000143241.8 ENSMUST00000151318.8 |
||
| CDS-3UTR CAA 90 bp | GCATGTGTGCCGAGGGAGTTCAAAGGAGAGGCTGGCAGGACCCAGCCCCAAGGGATGAGCGGATCCCCCTaGGAAGACAGAATGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ACVPREFKGEAGRTQPQGMSGSP*EDRMKN Trigger: GTTCTTCATTCTGTCTTCCAAGGGGGATCCGCTCAT...CCCTTGGGGCTGGGTCCTGCCAGCCTCTCCTTTGAACTCCCTCGGCACACATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143241.8 |
||
| CDS-3UTR CAA 90 bp | ACTACTACCTCTCCTGTCACCACCACGGTTCCCAGCGTGCAGCCCATCGTCAAGCTGGGAAGGAAGCTCTaGAGCCGTATCTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TTTSPVTTTVPSVQPIVKLGRKL*SRISPW Trigger: CCAAGGAGAGATACGGCTCAAGAGCTTCCTTCCCAG...CTTGACGATGGGCTGCACGCTGGGAACCGTGGTGGTGACAGGAGAGGTAGTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS TCA 90 bp | GGAGTTCGTAGACAAGCGCCACATTGCGTGAGATGGTTCCCTCATTaGGTGAGCCACAGTAGTCACCCAAGAGAGTGGCTAGCCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GVRRQAPHCVRWFPH*VSHSSHPREWLAGK Trigger: TTTCCCGGCTAGCCACTCTCTTGGGTGACTACTGTGGCTCACTCAATGAGGGAACCATCTCACGCAATGTGGCGCTTGTCTACGAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000151318.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCCAGGCTGCTCTACAAGCTCAGCAGGTCAACAGGACCACACTCACCATGACCACAGCTTCAGTTaGGATGAAGTTCCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGPGCSTSSAGQQDHTHHDHSFS*DEVPQH Trigger: ATGCTGAGGAACTTCATCCAAACTGAAGCTGTGGTC...ATGGTGAGTGTGGTCCTGTTGACCTGCTGAGCTTGTAGAGCAGCCTGGGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTGGAGGGCATGTGTCAACAGTAGATACCTGGAAAAGGATTCTGGGGGAAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WEWRACVNSRYLEKDSGGKRLKG*LTTASV Trigger: AACTGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTT...TCCCCCAGAATCCTTTTCCAGGTATCTACTGTTGACACATGCCCTCCACTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTGGCTCAGGTCTGCCTTCAATGTTAACATTTTCTTCCTGTGTCTGTTCGGCTGGCTGCGCTGCTaGGGGCCACTTTATTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEWLRSAFNVNIFFLCLFGWLRC*GPLYSA Trigger: AGCAGAATAAAGTGGCCCCAAGCAGCGCAGCCAGCC...GAACAGACACAGGAAGAAAATGTTAACATTGAAGGCAGACCTGAGCCACTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACAGAAAAGGCCGGAGAGTaGAGAGCCTCCTTGTACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSSLWEDTSPYSAFSTETEKAGE*RASLYP Trigger: CGGGTACAAGGAGGCTCTCAACTCTCCGGCCTTTTC...TGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACAGGAGAAGGTCCATGGTaGGGAAGTCCCTGCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSLWEDTSPYSAFSTETGEGPW*GSPCKP Trigger: TGGCTTGCAGGGACTTCCCAACCATGGACCTTCTCC...TGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGCTGCTGAGGGAGGAAATGTACCCAGGTTTGGGATAGCGTTTGTCATAATGAGCGGATCCCCCTaGGAAGACAGAATGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSAAEGGNVPRFGIAFVIMSGSP*EDRMKN Trigger: GTTCTTCATTCTGTCTTCCAAGGGGGATCCGCTCAT...TATGACAAACGCTATCCCAAACCTGGGTACATTTCCTCCCTCAGCAGCTGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | CTTTTCACTGTGACTTCTAACAGTAACACTGGATGGGCTCCTCTCATCTTTGTGATGAATGTTGAGAGCTaGGCTCTTTGGGGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LFTVTSNSNTGWAPLIFVMNVES*ALWGQV Trigger: GACCTGCCCCCAAAGAGCCAAGCTCTCAACATTCAT...CACAAAGATGAGAGGAGCCCATCCAGTGTTACTGTTAGAAGTCACAGTGAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | CTCTCATCTTTGTGGGAGGATACCAGCCCTTACTCTGCCTTCTCTACAGAAACAAAACACCTCATTCTTTaGGCTCTGGTCAGAACGACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLWEDTSPYSAFSTETKHLIL*ALVRTT Trigger: AGTCGTTCTGACCAGAGCCAAAAGAATGAGGTGTTT...TGTTTCTGTAGAGAAGGCAGAGTAAGGGCTGGTATCCTCCCACAAAGATGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019662.11 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCAGAATAAAAGTTGGATTTGTAAGTTTGTGAGCCTCCCGCATCACATAAGACGTTTTCTAAGGTaGTGGCCACCAAATAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VPQNKSWICKFVSLPHHIRRFLR*WPPNRA Trigger: GGCTCTATTTGGTGGCCACAACCTTAGAAAACGTCT...TATGTGATGCGGGAGGCTCACAAACTTACAAATCCAACTTTTATTCTGAGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000143241.8 |
||
| CDS GCA 72 bp | TCCAGGCAGTCCCGTCAGCTTCCGGTAGAAGAGCTCTaGCACATCACGACCACCACTGTCCCCGCGGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SRQSRQLPVEEL*HITTTTVPAEV Trigger: GACTTCCGCGGGGACAGTGGTGGTCGTGATGTGGCAGAGCTCTTCTACCGGAAGCTGACGGGACTGCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000019662.11 ENSMUST00000143241.8 ENSMUST00000151318.8 |
||
| CDS TCA 72 bp | AGAGAGTGGCTAGCCGGGAAAGCAGCTCCAGAAGGCTaGAAGGAGAGACGTTTTCTAAGGTTGTGGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: REWLAGKAAPEG*KERRFLRLWPP Trigger: TGGTGGCCACAACCTTAGAAAACGTCTCTCCTTTCAGCCTTCTGGAGCTGCTTTCCCGGCTAGCCACTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000151318.8 |
||
| CDS TCA 72 bp | AGACAAGCGCCACATTGCGTGAGATGGTTCCCTCATTaGGTGAGCCACAGTAGTCACCCAAGAGAGTGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RQAPHCVRWFPH*VSHSSHPREWL Trigger: TAGCCACTCTCTTGGGTGACTACTGTGGCTCACTCAATGAGGGAACCATCTCACGCAATGTGGCGCTTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000151318.8 |
||
| CDS CAA 72 bp | AATCCAACACTGCTGAGGTCAAAGAGGCTGAAGGGCTaGCTGACCACAGCTTCAGTTTGGATGAAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NPTLLRSKRLKG*LTTASVWMKFL Trigger: GAGGAACTTCATCCAAACTGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGCAGTGTTGGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000151318.8 |
||
| CDS CAA 90 bp | GCTGAGGTCAAAGAGGCTGAAGGGCTTGCTGACCACAGCTTCAGTTaGGATGAAGTTCCTCAGCATTTCTGTGGATGTAGTCTGCACATA | + |
|
Preference number: 6 (lower is better) Translates to: AEVKEAEGLADHSFS*DEVPQHFCGCSLHI Trigger: TATGTGCAGACTACATCCACAGAAATGCTGAGGAACTTCATCCAAACTGAAGCTGTGGTCAGCAAGCCCTTCAGCCTCTTTGACCTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019662.11 ENSMUST00000151318.8 |
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