Pregenerated sensors for AP4E1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001998Ensembl transcript IDs: ENSMUST00000002063.15, ENSMUST00000110393.2, ENSMUST00000110394.8, ENSMUST00000142740.2, ENSMUST00000175663.8, ENSMUST00000177372.8
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTGGAGGCCAGGAGAAGGCAGGGCGTTGGACTCCCCTGCAGTTaGTGGGTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WLEARRRQGVGLPCS*WVLETELGSSRRAA Trigger: TGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATACCCACCAACTGCAGGGGAGTCCAACGCCCTGCCTTCTCCTGGCCTCCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
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| 3UTR TCA 90 bp | GGCTTGGTCTACATTCTCCACTGTTGCACCCTCTGCAGGAACATGTaGGGCTTCCGGTTTATCACCAGTTCCACTCTCCTTCTTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GLVYILHCCTLCRNM*GFRFITSSTLLLGQ Trigger: CTGCCCAAGAAGGAGAGTGGAACTGGTGATAAACCGGAAGCCTCACATGTTCCTGCAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR GCA 90 bp | CTGAGAGAGCTGTTCCTCTTGGCGCTGGTGATGGGGCTTATAAGGTaGTGCTCCCTGACTGAGTCCTTCAGCCACAAAACCATCCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: LRELFLLALVMGLIR*CSLTESFSHKTIQK Trigger: TTTCTGGATGGTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCACCTTATAAGCCCCATCACCAGCGCCAAGAGGAACAGCTCTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR CCA 90 bp | GAACATGTGAGGCTTCCGGTTTATCACCAGTTCCACTCTCCTTCTTaGGCAGATAGCCCTCTTTACCCCATAATTTCTTTATCCCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: EHVRLPVYHQFHSPS*ADSPLYPIISLSLP Trigger: TGGAAGGGATAAAGAAATTATGGGGTAAAGAGGGCTATCTGCCCAAGAAGGAGAGTGGAACTGGTGATAAACCGGAAGCCTCACATGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR TCA 90 bp | ACCACCACCTGGCCTCCTCCTCAGCATCTTTACAGCAAGTATTGGTaGGATAACGTAAAACCAGAGTGCCTGACCACTAAGAATAACTTA | + |
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Preference number: 1 (lower is better) Translates to: TTTWPPPQHLYSKYW*DNVKPECLTTKNNL Trigger: TAAGTTATTCTTAGTGGTCAGGCACTCTGGTTTTACGTTATCTCACCAATACTTGCTGTAAAGATGCTGAGGAGGAGGCCAGGTGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| 3UTR GCA 90 bp | GGCTGGAATCATTTCTCGAGGGAAAATCTGGCTGACAACAGTAAGTaGCATACATACTTCTACCAGATTAGTGCTCTGCAGGTCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: GWNHFSRENLADNSK*HTYFYQISALQVLY Trigger: GTAAAGGACCTGCAGAGCACTAATCTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATGATTCCAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR TCA 90 bp | GGATGCATTACATCTCCTCCCACTGAAAACACAGCATTCATTGTCTaGATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: GCITSPPTENTAFIV*INHTLSGAYFSASS Trigger: TGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
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| 3UTR CCA 90 bp | GTGGTCGGAGCAGAAACAGTTGCCTTCAGACTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCTTGCCCTCTCATACAAATTAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: VVGAETVAFRLLSSC*INFSSSCPLIQISN Trigger: GTTGCTAATTTGTATGAGAGGGCAAGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR TCA 90 bp | CTGTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTaGGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAG | + |
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Preference number: 1 (lower is better) Translates to: LFHHQNLLLAVSGSC*EYLDALHLLPLKTQ Trigger: CTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
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| 3UTR GCA 90 bp | AGCCCTCTTTACCCCATAATTTCTTTATCCCTTCCATCTTCAAACTaGTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATAT | + |
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Preference number: 1 (lower is better) Translates to: SPLYPIISLSLPSSN*LSLSALSRHCFQIY Trigger: ATATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGGGATAAAGAAATTATGGGGTAAAGAGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR CCA 90 bp | TCTATTAGTGGAAGAACGGCTGGAATCATTTCTCGAGGGAAAATCTaGCTGACAACAGTAAGTGCCATACATACTTCTACCAGATTAGTG | + |
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Preference number: 1 (lower is better) Translates to: SISGRTAGIISRGKI*LTTVSAIHTSTRLV Trigger: CACTAATCTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATGATTCCAGCCGTTCTTCCACTAATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR CCA 90 bp | TTAATTTCTCAACTAAGGGAGAAGAATGAGCTTGAGGTGTCAACTTaGTTACCGCAGCAAACAACCATGCTTTCGTTTCTGAAGAAATGG | + |
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Preference number: 1 (lower is better) Translates to: LISQLREKNELEVST*LPQQTTMLSFLKKW Trigger: CCATTTCTTCAGAAACGAAAGCATGGTTGTTTGCTGCGGTAACCAAGTTGACACCTCAAGCTCATTCTTCTCCCTTAGTTGAGAAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR GCA 90 bp | GCTCTTCATAAGCTCTGTATTTTCATGCAGATGTTTCAATTCAAATaGATGCTGTCTCAGACAAGTATTCAAGGATACAGTGAATTCTTG | + |
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Preference number: 1 (lower is better) Translates to: ALHKLCIFMQMFQFK*MLSQTSIQGYSEFL Trigger: CAAGAATTCACTGTATCCTTGAATACTTGTCTGAGACAGCATGCATTTGAATTGAAACATCTGCATGAAAATACAGAGCTTATGAAGAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR CAA 90 bp | TGCCACATGTGTGCAGGTGGCTGGAGGCCAGGAGAAGGCAGGGCGTaGGACTCCCCTGCAGTTGGTGGGTATTGGAAACTGAGCTCGGGT | + |
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Preference number: 2 (lower is better) Translates to: CHMCAGGWRPGEGRA*DSPAVGGYWKLSSG Trigger: ACCCGAGCTCAGTTTCCAATACCCACCAACTGCAGGGGAGTCCAACGCCCTGCCTTCTCCTGGCCTCCAGCCACCTGCACACATGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGTCTCGGCACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGTGCTGCTCCCTGACTaGGTCCTTCAGCCACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: SPVSALFPDISEPREMPAVLLPD*VLQPQN Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCAC...GGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTGCCGAGACAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR CAA 90 bp | GAGCTTGGTCCTTTCTGGTCGTGGCTTGGTCTACATTCTCCACTGTaGCACCCTCTGCAGGAACATGTGAGGCTTCCGGTTTATCACCAG | + |
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Preference number: 2 (lower is better) Translates to: ELGPFWSWLGLHSPL*HPLQEHVRLPVYHQ Trigger: CTGGTGATAAACCGGAAGCCTCACATGTTCCTGCAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGGACCAAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR CAA 90 bp | CAGCTGCTTTTCTTTCTCCTCTGTAGAAGGGATATGGCCTTGAGCTaGGTCCTTTCTGGTCGTGGCTTGGTCTACATTCTCCACTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: QLLFFLLCRRDMALS*VLSGRGLVYILHCC Trigger: GCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATCCCTTCTACAGAGGAGAAAGAAAAGCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATATCAGGGGCTTATAAGGTGCTaGTCCCTGACTGAGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SNCLSLSALSRHCFQIYQGLIRC*SLTESF Trigger: GAAGGACTCAGTCAGGGAGCAGCACCTTATAAGCCC...CTGATATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTTGCTGAGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCAGTGCTGCTCCCTGACTaGGTCCTTCAGCCACAAAAC | + |
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Preference number: 2 (lower is better) Translates to: KLLRISGCITSPPTENTAVLLPD*VLQPQN Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCAC...TGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCTCAGCAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATATCAGATGGTTATCTGGTGTTaGAGAGCCAGAGAAGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SNCLSLSALSRHCFQIYQMVIWC*RAREGS Trigger: GGATCCTTCTCTGGCTCTTCAACACCAGATAACCAT...CTGATATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAATCATTTCTCGAGGGAAAATCTGGCTGACAACAGTAAGTGCCATACATTCGTTTTCAGTGTCGTaGTCGGAGCAGAAACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: AGIISRGKIWLTTVSAIHSFSVS*SEQKQL Trigger: CAACTGTTTCTGCTCCGACCACGACACTGAAAACGA...ATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATGATTCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGATCTTCTGTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAATG | + |
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Preference number: 2 (lower is better) Translates to: VDLLFHHQNLLLAVSGSCETVVQ*SQMKKM Trigger: CATTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...GCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAGAAGATCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCAGGTCCTTTACCACTGTATTCACAAGGAGAAGCAAAAGTTCATGACTTTCTCTTCTCCATGCTaGAGGCATTTACACTGCACT | + |
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Preference number: 2 (lower is better) Translates to: ALQVLYHCIHKEKQKFMTFSSPC*RHLHCT Trigger: AGTGCAGTGTAAATGCCTGCAGCATGGAGAAGAGAA...AGTCATGAACTTTTGCTTCTCCTTGTGAATACAGTGGTAAAGGACCTGCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAATCATTTCTCGAGGGAAAATCTGGCTGACAACAGTAAGTGCCATACATTGTTTCTCTTCTCCATaGTGCAGGCATTTACACTGC | + |
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Preference number: 2 (lower is better) Translates to: AGIISRGKIWLTTVSAIHCFSSP*CRHLHC Trigger: GCAGTGTAAATGCCTGCAGCATGGAGAAGAGAAACA...ATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATGATTCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTTCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: SIFKLLVSFSPVSALFPDEQIFQ*TWQPSQ Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...ATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGACACAGTTTCTTaGGGATCATTCTTAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGDDTVS*GSFLAG Trigger: TCCTGCTAAGAATGATCCCCAAGAAACTGTGTCATC...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| 3UTR CAA 90 bp | TACATTCCTTCATCGTTTTCAGTGTCGTGGTCGGAGCAGAAACAGTaGCCTTCAGACTACTCAGTTCCTGCTGGATTAATTTCTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YIPSSFSVSWSEQKQ*PSDYSVPAGLISLL Trigger: AAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCACGACACTGAAAACGATGAAGGAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR CAA 90 bp | CCTCTTTACCCCATAATTTCTTTATCCCTTCCATCTTCAAACTGCTaGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATATCAG | + |
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Preference number: 2 (lower is better) Translates to: PLYPIISLSLPSSNC*SLSALSRHCFQIYQ Trigger: CTGATATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGGGATAAAGAAATTATGGGGTAAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGTCGTCCAGTGAAGCCAGATGAAGAAAATGATAGTCCATATGGTTCAAAATTGAGAACCTTTTCCTaGGAGAGCTGTTCCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: DCRPVKPDEENDSPYGSKLRTFS*ESCSSW Trigger: CCAAGAGGAACAGCTCTCTCAGGAAAAGGTTCTCAA...TTTTGAACCATATGGACTATCATTTTCTTCATCTGGCTTCACTGGACGACAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR-3UTR TCA 90 bp | AGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCATTCATTGTCTTGAGAACCTTTTCCTaGGAGAGCTGTTCCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: RISGCITSPPTENTAFIVLRTFS*ESCSSW Trigger: CCAAGAGGAACAGCTCTCTCAGGAAAAGGTTCTCAA...GACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATAAAGACGCATCTGCCACTATGTCTTCACAATTCTGAGCACCCTGAAGCACTAGGCATTCAATTATaGTTATCTGGTGTTGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KIKTHLPLCLHNSEHPEALGIQL*LSGVEE Trigger: CTCTTCAACACCAGATAACCATAATTGAATGCCTAG...TGCTTCAGGGTGCTCAGAATTGTGAAGACATAGTGGCAGATGCGTCTTTATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR GCA 90 bp | TATATAAGTCTCACCATACATTCCTTCATCGTTTTCAGTGTCGTGGTCGGAGCAAATTTCTCTTCTTCTTaGCCTCTCATACAAATTAGC | + |
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Preference number: 2 (lower is better) Translates to: YISLTIHSFIVFSVVVGANFSSS*PLIQIS Trigger: GCTAATTTGTATGAGAGGGCAAGAAGAAGAGAAATT...TGCTCCGACCACGACACTGAAAACGATGAAGGAATGTATGGTGAGACTTATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTAGTGCTCTGCAGGTCCTTTACCACTGTATTCACAAGGAGAAGCAAAAGTTTGGGCCAACTTGATTaGATGTATATAACCAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RLVLCRSFTTVFTRRSKSLGQLD*MYITKR Trigger: TCTTTTGGTTATATACATGCAATCAAGTTGGCCCAA...ACTTTTGCTTCTCCTTGTGAATACAGTGGTAAAGGACCTGCAGAGCACTAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
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| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTaGATCACCACCACCACCACCACCTGGCCTCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PASASRVLGLKA*ITTTTTTWPPP Trigger: AGGAGGAGGCCAGGTGGTGGTGGTGGTGGTGATGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| 3UTR CCA 72 bp | GTCTGTGTGAATATATGCCACATGTGTGCAGGTGGCTaGAGGCCAGGAGAAGGCAGGGCGTTGGACTCCCCT | + |
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Preference number: 3 (lower is better) Translates to: VCVNICHMCAGG*RPGEGRALDSP Trigger: AGGGGAGTCCAACGCCCTGCCTTCTCCTGGCCTCCAGCCACCTGCACACATGTGGCATATATTCACACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCAGAGAGCTGTTCCTCTaGGCGCTGGTGATGGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: HCFQIYQSPGKCQPETVVRELFL*ALVMGL Trigger: AAGCCCCATCACCAGCGCCAAGAGGAACAGCTCTCT...GACGACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR GCA 72 bp | CTGTTCCTCTTGGCGCTGGTGATGGGGCTTATAAGGTaGTGCTCCCTGACTGAGTCCTTCAGCCACAAAACC | + |
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Preference number: 3 (lower is better) Translates to: LFLLALVMGLIR*CSLTESFSHKT Trigger: GGTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCACCTTATAAGCCCCATCACCAGCGCCAAGAGGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR GCA 72 bp | TTCCTCTTGGCGCTGGTGATGGGGCTTATAAGGTGCTaGTCCCTGACTGAGTCCTTCAGCCACAAAACCATC | + |
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Preference number: 3 (lower is better) Translates to: FLLALVMGLIRC*SLTESFSHKTI Trigger: GATGGTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCACCTTATAAGCCCCATCACCAGCGCCAAGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR CCA 72 bp | GGATTAAAGGCGTGCATCACCACCACCACCACCACCTaGCCTCCTCCTCAGCATCTTTACAGCAAGTATTGG | + |
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Preference number: 3 (lower is better) Translates to: GLKACITTTTTT*PPPQHLYSKYW Trigger: CCAATACTTGCTGTAAAGATGCTGAGGAGGAGGCCAGGTGGTGGTGGTGGTGGTGATGCACGCCTTTAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| 3UTR CCA 72 bp | AAGGGATATGGCCTTGAGCTTGGTCCTTTCTGGTCGTaGCTTGGTCTACATTCTCCACTGTTGCACCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: KGYGLELGPFWS*LGLHSPLLHPL Trigger: CAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR-3UTR CAA 90 bp | TCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATATCAGAGAGAGCTGTTCCTCTaGGCGCTGGTGATGGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: SNCLSLSALSRHCFQIYQRELFL*ALVMGL Trigger: AAGCCCCATCACCAGCGCCAAGAGGAACAGCTCTCT...CTGATATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR CCA 72 bp | AGCTGGCTATGCTGTCACACCTATAATCCTGGCATTTaGTGGCAGAGGCAGGGGCATCACAAGTTTGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: SWLCCHTYNPGI*WQRQGHHKFES Trigger: AGACTCAAACTTGTGATGCCCCTGCCTCTGCCACCAAATGCCAGGATTATAGGTGTGACAGCATAGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
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| 3UTR TCA 72 bp | AGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAATGATAGTCCATATGGTT | + |
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Preference number: 3 (lower is better) Translates to: SPGKCQPETVVQ*SQMKKMIVHMV Trigger: AACCATATGGACTATCATTTTCTTCATCTGGCTTCACTGGACGACAGTCTCCGGCTGGCATTTCCCTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
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| 3UTR TCA 72 bp | TACATTCTCCACTGTTGCACCCTCTGCAGGAACATGTaGGGCTTCCGGTTTATCACCAGTTCCACTCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: YILHCCTLCRNM*GFRFITSSTLL Trigger: AAGGAGAGTGGAACTGGTGATAAACCGGAAGCCTCACATGTTCCTGCAGAGGGTGCAACAGTGGAGAATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR GCA 72 bp | AGAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTaGACTCCAAAGCCAAGTGTGATTCAGGTGATGAGC | + |
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Preference number: 3 (lower is better) Translates to: RAESTDFPYSRF*TPKPSVIQVMS Trigger: GCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| 3UTR GCA 72 bp | GGTCCTAGCCCAACAAACAGCGATGATGCCAACAGCTaGTTTTCTTTCTCCTCTGTAGAAGGGATATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GPSPTNSDDANS*FSFSSVEGIWP Trigger: AGGCCATATCCCTTCTACAGAGGAGAAAGAAAAGCAGCTGTTGGCATCATCGCTGTTTGTTGGGCTAGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
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| 3UTR TCA 72 bp | TACCGAAGCTGTAGAAGGGGCACCAGCTTTCTTCAGTaGGTAGCCACCCATGTTCATGCAAGCAATTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: YRSCRRGTSFLQ*VATHVHASNSI Trigger: GATAGAATTGCTTGCATGAACATGGGTGGCTACTCACTGAAGAAAGCTGGTGCCCCTTCTACAGCTTCGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| 3UTR TCA 72 bp | TGCTTTTCTTTCTCCTCTGTAGAAGGGATATGGCCTTaGGCTTGGTCCTTTCTGGTCGTGGCTTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: CFSFSSVEGIWP*AWSFLVVAWST Trigger: TGTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATCCCTTCTACAGAGGAGAAAGAAAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCCAGTGAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: FPDISEPREMPAGDCRPVNFPMH*AAFSSN Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...CACTGGACGACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| 3UTR TCA 72 bp | TGGCCTCCTCCTCAGCATCTTTACAGCAAGTATTGGTaGGATAACGTAAAACCAGAGTGCCTGACCACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: WPPPQHLYSKYW*DNVKPECLTTK Trigger: CTTAGTGGTCAGGCACTCTGGTTTTACGTTATCTCACCAATACTTGCTGTAAAGATGCTGAGGAGGAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAACGGCTGGAATCATTTCTCGAGGGAAAATCTGGCTGACAACAGTAAGTGCCACCTTTAAAGGCATCTaGTTTCTCTTCTCCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RTAGIISRGKIWLTTVSATFKGI*FLFSML Trigger: CAGCATGGAGAAGAGAAACAAGATGCCTTTAAAGGT...GGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATGATTCCAGCCGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| 3UTR TCA 72 bp | CATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTaGGAATATCTGGATGCATTACATCTCCTCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: HQNLLLAVSGSC*EYLDALHLLPL Trigger: CAGTGGGAGGAGATGTAATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| 3UTR GCA 72 bp | CATTTCTCGAGGGAAAATCTGGCTGACAACAGTAAGTaGCATACATACTTCTACCAGATTAGTGCTCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HFSRENLADNSK*HTYFYQISALQ Trigger: CTGCAGAGCACTAATCTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGCCAGATTTTCCCTCGAGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| 3UTR GCA 72 bp | TACCCCATAATTTCTTTATCCCTTCCATCTTCAAACTaGTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: YPIISLSLPSSN*LSLSALSRHCF Trigger: GAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGGGATAAAGAAATTATGGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
||
| 3UTR TCA 72 bp | ACATCTCCTCCCACTGAAAACACAGCATTCATTGTCTaGATAAACCACACGTTGTCAGGAGCATATTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSPPTENTAFIV*INHTLSGAYFS Trigger: TGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTTCAATTCAAATGCATGCTGTCTCAGACAAGTATTCAAGGATACAGTGAATATGGTTATCTGGTGTaGAAGAGCCAGAGAAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: MFQFKCMLSQTSIQGYSEYGYLV*KSQRRI Trigger: GATCCTTCTCTGGCTCTTCAACACCAGATAACCATA...TTCACTGTATCCTTGAATACTTGTCTGAGACAGCATGCATTTGAATTGAAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| 3UTR GCA 72 bp | TTTAAACCTTTAAAGGCATCTTGTTTCTCTTCTCCATaGTGCAGGCATTTACACTGCACTGTAGTTACTTAT | + |
|
Preference number: 3 (lower is better) Translates to: FKPLKASCFSSP*CRHLHCTVVTY Trigger: ATAAGTAACTACAGTGCAGTGTAAATGCCTGCAGCATGGAGAAGAGAAACAAGATGCCTTTAAAGGTTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| 3UTR TCA 72 bp | TTAATAAAAGAAGACGCCAGAACAGTATTAGGCACATaGGCACAACTTCTCTTCCAGGAAGATAAATTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LIKEDARTVLGT*AQLLFQEDKLS Trigger: AGATAATTTATCTTCCTGGAAGAGAAGTTGTGCTCATGTGCCTAATACTGTTCTGGCGTCTTCTTTTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| 3UTR CAA 72 bp | AGGCAGGGCGTTGGACTCCCCTGCAGTTGGTGGGTATaGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RQGVGLPCSWWV*ETELGSSRRAA Trigger: TGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATACCCACCAACTGCAGGGGAGTCCAACGCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAGAAGAGCCCCGGCAGTaGGGTCAGCGTCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESEEPRQ*GQRPLH Trigger: GTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTC...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCCAGTGCCTGGAGAAGAAGGGTaGTCTGGAGGCCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPDISEPREMPAGDCRPVPGEEG*SGGRRS Trigger: GGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGG...CACTGGACGACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCCCTGGAGAAGAAGGGTaGTCTGGAGGCCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCPGEEG*SGGRRS Trigger: GGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGG...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESAGPPS*FCRKSP Trigger: GGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGC...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTGAAGAGCCCCGGCAGTaGGGTCAGCGTCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSEEPRQ*GQRPLH Trigger: GTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTC...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCCCTGGAGAAGAAGGGTaGTCTGGAGGCCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLPGEEG*SGGRRS Trigger: GGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGG...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | CCTTCCATCTTCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSIFKLLVSFSPVSALFPAGPPS*FCRKSP Trigger: GGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGC...TGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCARCGN*TLPGAS Trigger: GGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGC...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTGTGCTGCTCCCTGACTaGGTCCTTCAGCCACAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DEQSLCPLHQSRELSLSLVLLPD*VLQPQN Trigger: GTTTTGTGGCTGAAGGACTCAGTCAGGGAGCAGCAC...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | TGGCTGACAACAGTAAGTGCCATACATACTTCTACCAGATTAGTGCTCTGCAGGGAAGAGCCCCGGCAGTaGGGTCAGCGTCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLTTVSAIHTSTRLVLCREEPRQ*GQRPLH Trigger: GTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTC...CCTGCAGAGCACTAATCTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| 3UTR CAA 72 bp | GATATGGCCTTGAGCTTGGTCCTTTCTGGTCGTGGCTaGGTCTACATTCTCCACTGTTGCACCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DMALSLVLSGRG*VYILHCCTLCR Trigger: CCTGCAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLARCGN*TLPGAS Trigger: GGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGC...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | GAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGAAGGCACAGGCAAGCTaGCACTCTCGAGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPRAQIFLTAGSALQSQVKAQAS*HSRASQ Trigger: CTGAGAAGCTCGAGAGTGTCAGCTTGCCTGTGCCTT...CACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCGGGCTTATAAGGTGCTaGTCCCTGACTGAGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGDEQSLCPLHQSRELSLGLIRC*SLTESF Trigger: GAAGGACTCAGTCAGGGAGCAGCACCTTATAAGCCC...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | GATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFPYSRFCTPKPSVIQVMAGPPS*FCRKSP Trigger: GGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGC...CATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GTTGATCTTCTGTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCGAAGAGCCCCGGCAGTaGGGTCAGCGTCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDLLFHHQNLLLAVSGSCEEPRQ*GQRPLH Trigger: GTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTC...GCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAGAAGATCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | CGGCACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCCGGAGCAGAAACAGTTaGCTTCAGACTACTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHCFQIYQSPGKCQPETVRSRNS*LQTTQF Trigger: GAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCG...GACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTGCAAAGAGGCAGCCATaGCCCCAACATCTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSAKRQP*PQHLCH Trigger: GTGACAGAGATGTTGGGGTCATGGCTGCCTCTTTGC...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | CATTGTCTGAATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCAGCGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCLNKPHVVRSIFLSQLSARCGN*TLPGAS Trigger: GGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGC...GCTGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCATTCATTGTCGAAGAGCCCCGGCAGTaGGGTCAGCGTCCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RISGCITSPPTENTAFIVEEPRQ*GQRPLH Trigger: GTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTC...GACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AGATTAGTGCTCTGCAGGTCCTTTACCACTGTATTCACAAGGAGAAGCAAAAGTCCTGGAGAAGAAGGGTaGTCTGGAGGCCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVLCRSFTTVFTRRSKSPGEEG*SGGRRS Trigger: GGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGG...ACTTTTGCTTCTCCTTGTGAATACAGTGGTAAAGGACCTGCAGAGCACTAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| CDS-3UTR CCA 90 bp | TATATAAGTCTCACCATACATTCCTTCATCGTTTTCAGTGTCGTGGTCGGAGCAGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YISLTIHSFIVFSVVVGAAGPPS*FCRKSP Trigger: GGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGC...TGCTCCGACCACGACACTGAAAACGATGAAGGAATGTATGGTGAGACTTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTGGATGCATTGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPSASSLRKLLRISGCIAGPPS*FCRKSP Trigger: GGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGC...AATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTAGTATTCTCAGGAGCTaGATCTGTAACCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DEQSLCPLHQSRELSLSLSILRS*ICNHGA Trigger: AGCACCATGGTTACAGATTCAGCTCCTGAGAATACT...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | CCTTTCTGGTCGTGGCTTGGTCTACATTCTCCACTGTTGCACCCTCTGCAGGAAAGTATTCTCAGGAGCTaGATCTGTAACCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFWSWLGLHSPLLHPLQESILRS*ICNHGA Trigger: AGCACCATGGTTACAGATTCAGCTCCTGAGAATACT...TTCCTGCAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCATGGTTATCTGGTGTTaGAGAGCCAGAGAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCMVIWC*RAREGS Trigger: GGATCCTTCTCTGGCTCTTCAACACCAGATAACCAT...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR TCA 90 bp | AATATACAATCTCAAGATTCTGGCCCATCACACACACAAGGCATAATCTCTTCTCCCACCAGCCACATCTaGGCCAAGGCTGAGGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NIQSQDSGPSHTQGIISSPTSHI*AKAEGG Trigger: TCCGCCCTCAGCCTTGGCTCAGATGTGGCTGGTGGG...AGAAGAGATTATGCCTTGTGTGTGTGATGGGCCAGAATCTTGAGATTGTATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTCCTGGAGAAGAAGGGTaGTCTGGAGGCCGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSSKPSASSLRKLLRISPGEEG*SGGRRS Trigger: GGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGG...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCCGGAGCAGAAACAGTTaGCTTCAGACTACTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCRSRNS*LQTTQF Trigger: GAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCG...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCCAGTGACCAGATTAGTGCTCTaGAGGTCCTTTACCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPDISEPREMPAGDCRPVTRLVL*RSFTTV Trigger: TACAGTGGTAAAGGACCTGCAGAGCACTAATCTGGT...CACTGGACGACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTGGTCGTGGCTTGGTCTACATTCTCCACTGTTGCACCCTCTGCAGGAAATCCTAAGGTATATGTaGAAAGAGGCAGCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PFWSWLGLHSPLLHPLQEILRYM*KEAAMT Trigger: GGTCATGGCTGCCTCTTTGCACATATACCTTAGGAT...TTCCTGCAGAGGGTGCAACAGTGGAGAATGTAGACCAAGCCACGACCAGAAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCCGAGACCTGAATGCCTaGACTCAGGAGTTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLRDLNA*TQEFLP Trigger: AGGAAGAAACTCCTGAGTGCAGGCATTCAGGTCTCG...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGAGTCTCAGGTTCTGCTaGAGCTCTGTTAGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPRAQIFLTAGSALQSQVSLRFC*SSVRTE Trigger: TTCTGTCCTAACAGAGCTGCAGCAGAACCTGAGACT...CACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCATCGTTTTCAGTGTCGTaGTCGGAGCAGAAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESSFSVS*SEQKQL Trigger: CAACTGTTTCTGCTCCGACCACGACACTGAAAACGA...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| 3UTR CAA 72 bp | CTGCTTTTCTTTCTCCTCTGTAGAAGGGATATGGCCTaGAGCTTGGTCCTTTCTGGTCGTGGCTTGGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFFLLCRRDMA*SLVLSGRGLVY Trigger: GTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATCCCTTCTACAGAGGAGAAAGAAAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTCTTGGCGCTGGTGATGGGGCTTATAAGGTGCTGCTCCCTGACTGAGTCCCTTGATTGGGGGCAATaGGGTAAAATTTGTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLALVMGLIRCCSLTESLDWGQ*GKICIM Trigger: CATTATACAAATTTTACCTCATTGCCCCCAATCAAG...GGACTCAGTCAGGGAGCAGCACCTTATAAGCCCCATCACCAGCGCCAAGAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCAGTATTCTCAGGAGCTaGATCTGTAACCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCSILRS*ICNHGA Trigger: AGCACCATGGTTACAGATTCAGCTCCTGAGAATACT...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR TCA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCATCTGTGAACTCTaGGTCAGTTTTACTAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGDEQSLCPLHQSRELSLSICEL*VSFTSD Trigger: GTCACTAGTAAAACTGACTCAGAGTTCACAGATGCT...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAACCAGATTAGTGCTCTaGAGGTCCTTTACCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESTRLVL*RSFTTV Trigger: TACAGTGGTAAAGGACCTGCAGAGCACTAATCTGGT...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCATCCTAAGGTATATGTaGAAAGAGGCAGCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCILRYM*KEAAMT Trigger: GGTCATGGCTGCCTCTTTGCACATATACCTTAGGAT...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTGTCTCGGCACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCTTCCCGCCCACCACCTaGTTTAAAATTGTTACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPCLGTVSRYIRAQGNASFPPTT*FKIVTK Trigger: TTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAA...GCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTGCCGAGACAGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | CTGACCTGTGCAAAGCAGAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCTTCCATCTTCAAACTaGTTGTCTCTTTCAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTCAKQSREHRFSLQQVLLPSSN*LSLSAL Trigger: CAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAG...CAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTCTGCTTTGCACAGGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTGATGATGCCAACAGCTaGTTTTCTTTCTCCTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DEQSLCPLHQSRELSLSLDDANS*FSFSSV Trigger: TACAGAGGAGAAAGAAAAGCAGCTGTTGGCATCATC...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| 3UTR CAA 72 bp | TTCTTTCTCCTCTGTAGAAGGGATATGGCCTTGAGCTaGGTCCTTTCTGGTCGTGGCTTGGTCTACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFLLCRRDMALS*VLSGRGLVYIL Trigger: GAGAATGTAGACCAAGCCACGACCAGAAAGGACCAAGCTCAAGGCCATATCCCTTCTACAGAGGAGAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | CCACAAAACCATCCAGAAAAGATAAAGACGCATCTGCCACTATGTCTTCACAATGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQNHPEKIKTHLPLCLHNARCGN*TLPGAS Trigger: GGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGC...ATTGTGAAGACATAGTGGCAGATGCGTCTTTATCTTTTCTGGATGGTTTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTACAGCATTCATTGTCTaGATAAACCACACGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DEQSLCPLHQSRELSLSLTAFIV*INHTLS Trigger: TGACAACGTGTGGTTTATTCAGACAATGAATGCTGT...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTGAGACTGTCGTCCAGTaGAGCCAGATGAAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSETVVQ*SQMKKM Trigger: CATTTTCTTCATCTGGCTTCACTGGACGACAGTCTC...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTATGGAAAATTCCAGTTaGACAGAATGCGTATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DEQSLCPLHQSRELSLSLMENSS*TECVSI Trigger: GATGGATACGCATTCTGTTCAACTGGAATTTTCCAT...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | CTGACCTGTGCAAAGCAGAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGGCTGACAACAGTAAGTaGCATACATACTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCAKQSREHRFSLQQVLADNSK*HTYFYQ Trigger: CTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGC...CAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTCTGCTTTGCACAGGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAGCTGACAACAGTAAGTaGCATACATACTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESADNSK*HTYFYQ Trigger: CTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGC...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTCGAAGTCTCAGGTTCTaGTGCAGCTCTGTTAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGRSLRF*CSSVRT Trigger: TGTCCTAACAGAGCTGCAGCAGAACCTGAGACTTCG...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGGTCCTTTCTGGTCGTaGCTTGGTCTACATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGGPFWS*LGLHSP Trigger: TGGAGAATGTAGACCAAGCCACGACCAGAAAGGACC...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | GACTGTCGTCCAGTGAAGCCAGATGAAGAAAATGATAGTCCATATGGTTCAAAAGGGTGGTGCCATTTCTaGGCTGGATGGTCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCRPVKPDEENDSPYGSKGWCHF*AGWSRV Trigger: AACCCTGGACCATCCAGCCCAGAAATGGCACCACCC...TTTTGAACCATATGGACTATCATTTTCTTCATCTGGCTTCACTGGACGACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGATGGTTATCTGGTGTTaGAGAGCCAGAGAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDEMVIWC*RAREGS Trigger: GGATCCTTCTCTGGCTCTTCAACACCAGATAACCAT...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | AATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCAGCAATTCTGCCATGGTTATCTGGTGTTaGAGAGCCAGAGAAGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: NKPHVVRSIFLSQLSNSAMVIWC*RAREGS Trigger: GGATCCTTCTCTGGCTCTTCAACACCAGATAACCAT...GGCAGAATTGCTGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS-3UTR TCA 90 bp | GATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGCAGGAGTTTCTTCCTTaGCAGTTGAAGTTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DFPYSRFCTPKPSVIQVMQEFLP*QLKLQR Trigger: CCTCTGCAACTTCAACTGTCAAGGAAGAAACTCCTG...CATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCATTCCCGCCCACCACCTaGTTTAAAATTGTTACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESFPPTT*FKIVTK Trigger: TTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAA...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESEQIFQ*TWQPSQ Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGTACATTCTCCACTGTTaGACCCTCTGCAGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDEYILHC*TLCRNM Trigger: CATGTTCCTGCAGAGGGTGCAACAGTGGAGAATGTA...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCACTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESLLSSC*INFSSS Trigger: CGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAG...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTTCGTTTTCAGTGTCGTaGTCGGAGCAGAAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGSFSVS*SEQKQL Trigger: CAACTGTTTCTGCTCCGACCACGACACTGAAAACGA...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | AATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCAGCAATTCTGCCTCGTTTTCAGTGTCGTaGTCGGAGCAGAAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKPHVVRSIFLSQLSNSASFSVS*SEQKQL Trigger: CAACTGTTTCTGCTCCGACCACGACACTGAAAACGA...GGCAGAATTGCTGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGDEQSLCPLHQSRELSLIFQCT*QPSQVI Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCACTTGATTGGGGGCAATaGGGTAAAATTTGTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESLDWGQ*GKICIM Trigger: CATTATACAAATTTTACCTCATTGCCCCCAATCAAG...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTTTCCTCCTGAACTTGTaGGACACAACATCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSFLLNL*DTTSAF Trigger: AAAAGCAGATGTTGTGTCTCACAAGTTCAGGAGGAA...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCGTTTTGATTTCCTCCTaGACTTGTGAGACACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLVLISS*TCETQH Trigger: ATGTTGTGTCTCACAAGTTCAGGAGGAAATCAAAAC...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGGCTACCTTGAGTTTTaGTTTCCTCCTGAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGGYLEF*FPPELV Trigger: CACAAGTTCAGGAGGAAATCAAAACTCAAGGTAGCC...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCTGAGAGAGCTGTTCCTCTTGGCGCTGGTGATGGGGCTTATAAGGTGCTTCAATTCAAATGCATaGTGTCTCAGACAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LFLRELFLLALVMGLIRCFNSNA*CLRQVF Trigger: GAATACTTGTCTGAGACAGCATGCATTTGAATTGAA...GCACCTTATAAGCCCCATCACCAGCGCCAAGAGGAACAGCTCTCTCAGGAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGAGACTGTCGTCATGTTTCAATTCAAATaGATGCTGTCTCAGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HCFQIYQSPGKCQPETVVMFQFK*MLSQTS Trigger: ACTTGTCTGAGACAGCATGCATTTGAATTGAAACAT...GACGACAGTCTCCGGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS-3UTR CCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCIFQCT*QPSQVI Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CCA 90 bp | CTGACCTGTGCAAAGCAGAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCTAGGCATTCAATTATaGTTATCTGGTGTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTCAKQSREHRFSLQQVLLGIQL*LSGVEE Trigger: CTCTTCAACACCAGATAACCATAATTGAATGCCTAG...CAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTCTGCTTTGCACAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCACTAGGCATTCAATTATaGTTATCTGGTGTTGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KLSSGPLEGQQALLTAESLGIQL*LSGVEE Trigger: CTCTTCAACACCAGATAACCATAATTGAATGCCTAG...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| 3UTR CAA 72 bp | TCATCGTTTTCAGTGTCGTGGTCGGAGCAGAAACAGTaGCCTTCAGACTACTCAGTTCCTGCTGGATTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSFSVSWSEQKQ*PSDYSVPAGLI Trigger: AATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCACGACACTGAAAACGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110393.2 |
||
| 3UTR CAA 72 bp | CCCATAATTTCTTTATCCCTTCCATCTTCAAACTGCTaGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIISLSLPSSNC*SLSALSRHCFQ Trigger: CTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGGGATAAAGAAATTATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142740.2 ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGGTCTCAGGAAGTTGCTaGGAATATCTGGATGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDEVSGSC*EYLDAL Trigger: TAATGCATCCAGATATTCTCAGCAACTTCCTGAGAC...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGATCTGCACACTGTATTaGAAGGATTTGGTGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDEICTLY*KDLVRS Trigger: AGAACGCACCAAATCCTTTCAATACAGTGTGCAGAT...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTTGGGCCAACTTGATTaGATGTATATAACCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLETELGSSRRAASTLNCLGQLD*MYITKR Trigger: TCTTTTGGTTATATACATGCAATCAAGTTGGCCCAA...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTTCAATTCAAATGCATaGTGTCTCAGACAAGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: EPRAQIFLTAGSALQSQVFNSNA*CLRQVF Trigger: GAATACTTGTCTGAGACAGCATGCATTTGAATTGAA...CACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGATGTTTCAATTCAAATaGATGCTGTCTCAGACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EPRAQIFLTAGSALQSQVMFQFK*MLSQTS Trigger: ACTTGTCTGAGACAGCATGCATTTGAATTGAAACAT...CACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCTTGCTTCACATCATTTaGAAAGGACAACCAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLLLHII*KGQPEF Trigger: AAACTCTGGTTGTCCTTTGCAAATGATGTGAAGCAA...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | TCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTGGATGCATTTCGTTTTCAGTGTCGTaGTCGGAGCAGAAACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPSASSLRKLLRISGCISFSVS*SEQKQL Trigger: CAACTGTTTCTGCTCCGACCACGACACTGAAAACGA...AATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGTTGCTGAGAATATCTaGATGCATTACATCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGVAENI*MHYISS Trigger: GGAGGAGATGTAATGCATCCAGATATTCTCAGCAAC...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCTTGATTGGGGGCAATaGGGTAAAATTTGTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSLDWGQ*GKICIM Trigger: CATTATACAAATTTTACCTCATTGCCCCCAATCAAG...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGGGAAAAATTTCTAACTaGGCATCTGTGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDEGKISN*ASVNSE Trigger: CTCAGAGTTCACAGATGCTCAGTTAGAAATTTTTCC...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTCGGAGCAGAAACAGTTaGCTTCAGACTACTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSSKPSASSLRKLLRISRSRNS*LQTTQF Trigger: GAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCG...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCCATCTTCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCATTGGGCCAACTTGATTaGATGTATATAACCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSIFKLLVSFSPVSALFPLGQLD*MYITKR Trigger: TCTTTTGGTTATATACATGCAATCAAGTTGGCCCAA...TGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTGGATGCATTATCCTAAGGTATATGTaGAAAGAGGCAGCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: SKPSASSLRKLLRISGCIILRYM*KEAAMT Trigger: GGTCATGGCTGCCTCTTTGCACATATACCTTAGGAT...AATGCATCCAGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCAGCAATTCTGCCGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NKPHVVRSIFLSQLSNSAEQIFQ*TWQPSQ Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...GGCAGAATTGCTGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS-3UTR CCA 90 bp | GATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGCTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: DFPYSRFCTPKPSVIQVMLLSSC*INFSSS Trigger: CGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAG...CATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | CATCTTCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATATCTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLQTACLFQPCLGTVSRYLLSSC*INFSSS Trigger: CGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAG...ATATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | AGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCATTCATTGTCAGTATTCTCAGGAGCTaGATCTGTAACCATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RISGCITSPPTENTAFIVSILRS*ICNHGA Trigger: AGCACCATGGTTACAGATTCAGCTCCTGAGAATACT...GACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | AATATACAATCTCAAGATTCTGGCCCATCACACACACAAGGCATAATCTCTTCTTTGAGAACCTTTTCCTaGGAGAGCTGTTCCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NIQSQDSGPSHTQGIISSLRTFS*ESCSSW Trigger: CCAAGAGGAACAGCTCTCTCAGGAAAAGGTTCTCAA...AGAAGAGATTATGCCTTGTGTGTGTGATGGGCCAGAATCTTGAGATTGTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTACCAGATTAGTGCTCTaGAGGTCCTTTACCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSSSKPSASSLRKLLRISTRLVL*RSFTTV Trigger: TACAGTGGTAAAGGACCTGCAGAGCACTAATCTGGT...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGCTGAGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCAGCTGACAACAGTAAGTaGCATACATACTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLRISGCITSPPTENTAADNSK*HTYFYQ Trigger: CTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGC...TGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCTCAGCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | CCATCACACACACAAGGCATAATCTCTTCTTTTACTAATAGAGGGCCTAGAAGCCTGAGAATATCTGGATaGATTACATCTCCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PSHTQGIISSFTNRGPRSLRISG*ITSPPT Trigger: AGTGGGAGGAGATGTAATGCATCCAGATATTCTCAG...GCTTCTAGGCCCTCTATTAGTAAAAGAAGAGATTATGCCTTGTGTGTGTGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGTTGGGCCAACTTGATTaGATGTATATAACCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQVLHSKAKCDSGDELGQLD*MYITKR Trigger: TCTTTTGGTTATATACATGCAATCAAGTTGGCCCAA...CTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAACCAGATTAGTGCTCTaGAGGTCCTTTACCACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSITSTTSAFYFGKVIDVTRLVL*RSFTTV Trigger: TACAGTGGTAAAGGACCTGCAGAGCACTAATCTGGT...TACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGATGGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAATCCTAAGGTATATGTaGAAAGAGGCAGCCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSITSTTSAFYFGKVIDVILRYM*KEAAMT Trigger: GGTCATGGCTGCCTCTTTGCACATATACCTTAGGAT...TACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGATGGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | CACAGCATTCATTGTCTGAATAAACCACACGTTGTCAGGAGCATATTTCTCAGCTTCCCGCCCACCACCTaGTTTAAAATTGTTACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSIHCLNKPHVVRSIFLSFPPTT*FKIVTK Trigger: TTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAA...GCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR TCA 90 bp | CCATCACACACACAAGGCATAATCTCTTCTTTTACTAATAGAGGGCCTAGAAGCTGCTCTTCTTTGCTCTaGTGTAAGTATTCAAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PSHTQGIISSFTNRGPRSCSSLL*CKYSSI Trigger: AATGCTTGAATACTTACATCAGAGCAAAGAAGAGCA...GCTTCTAGGCCCTCTATTAGTAAAAGAAGAGATTATGCCTTGTGTGTGTGATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAAACCATCGGAGCAGAAACAGTTaGCTTCAGACTACTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ITSTTSAFYFGKVIDVNHRSRNS*LQTTQF Trigger: GAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCG...ATGGTTTACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAGTGAGACACAACATCTaGTTTTCCCAACAAATCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSITSTTSAFYFGKVIDVVRHNI*FSQQID Trigger: GTCGATTTGTTGGGAAAAGCAGATGTTGTGTCTCAC...TACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGATGGAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CCA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTCTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSSSKPSASSLRKLLRISLLSSC*INFSSS Trigger: CGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAG...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CCA 90 bp | GTTGATCTTCTGTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCATTTTCCAATGCACTTaGCAGCCTTCTCAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VDLLFHHQNLLLAVSGSCIFQCT*QPSQVI Trigger: AATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAAT...GCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAACAGAAGATCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTCTTGATTGGGGGCAATaGGGTAAAATTTGTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: VSSSKPSASSLRKLLRISLDWGQ*GKICIM Trigger: CATTATACAAATTTTACCTCATTGCCCCCAATCAAG...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGCTGAGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCATTGGGCCAACTTGATTaGATGTATATAACCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLRISGCITSPPTENTALGQLD*MYITKR Trigger: TCTTTTGGTTATATACATGCAATCAAGTTGGCCCAA...TGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCTCAGCAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | ACCTCCATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTATTCCCGCCCACCACCTaGTTTAAAATTGTTACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSITSTTSAFYFGKVIDVFPPTT*FKIVTK Trigger: TTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAA...TACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGATGGAGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| 3UTR CAA 72 bp | TGTAACAAGTTAAAAAGTAAAAGCCAGAGATTGTGTTaGCCTAACAGCCAGCATGCCATGGTCTTGTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CNKLKSKSQRLC*PNSQHAMVLYN Trigger: ATTGTACAAGACCATGGCATGCTGGCTGTTAGGCAAACACAATCTCTGGCTTTTACTTTTTAACTTGTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ATGTTTCAATTCAAATGCATGCTGTCTCAGACAAGTATTCAAGGATACAGTGAAGCTGACAACAGTAAGTaGCATACATACTTCTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: MFQFKCMLSQTSIQGYSEADNSK*HTYFYQ Trigger: CTGGTAGAAGTATGTATGGCACTTACTGTTGTCAGC...TTCACTGTATCCTTGAATACTTGTCTGAGACAGCATGCATTTGAATTGAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR GCA 90 bp | AATATACAATCTCAAGATTCTGGCCCATCACACACACAAGGCATAATCTCTTCTATTGAAAGGATTTGGTaGGTTCTGTTTCTATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NIQSQDSGPSHTQGIISSIERIW*VLFLSQ Trigger: CTGTGATAGAAACAGAACGCACCAAATCCTTTCAAT...AGAAGAGATTATGCCTTGTGTGTGTGATGGGCCAGAATCTTGAGATTGTATATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR GCA 90 bp | ATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAAACCATGAACAAATTTTCCAATaGACTTGGCAGCCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITSTTSAFYFGKVIDVNHEQIFQ*TWQPSQ Trigger: TTGAGAAGGCTGCCAAGTGCATTGGAAAATTTGTTC...ATGGTTTACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CCA 90 bp | AGCCTGGAGAAGAAGGGTGCTCTGGAGGCCGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCCGGCAGTGCGGTCAGCGTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLEKKGALEAAGPPS*FCRKSPGSAVSVLS Trigger: GGAGAGGACGCTGACCGCACTGCCGGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGCGGCCTCCAGAGCACCCTTCTTCTCCAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002063.15 ENSMUST00000110393.2 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS GCA 90 bp | GAGAAGAAGGGTGCTCTGGAGGCCGCAGGTCCTCCCAGCTGGTTCTaGAGGAAGAGCCCCGGCAGTGCGGTCAGCGTCCTCTCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: EKKGALEAAGPPSWF*RKSPGSAVSVLSTM Trigger: CATGGTGGAGAGGACGCTGACCGCACTGCCGGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGCGGCCTCCAGAGCACCCTTCTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002063.15 ENSMUST00000110393.2 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS CCA 90 bp | TACCGCGTCAGCATGTACTCGGCAGTGCAGCACACAGGGGGTGGATaGGAGCAGCTTACAGGCCAACAGCCCTTCATTGCCTATGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: YRVSMYSAVQHTGGG*EQLTGQQPFIAYDV Trigger: GACGTCATAGGCAATGAAGGGCTGTTGGCCTGTAAGCTGCTCCCATCCACCCCCTGTGTGCTGCACTGCCGAGTACATGCTGACGCGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CCA 90 bp | TTGGAGGGCCCAGTCCCCTGCGGGTGGTGCCATTTCTGGGCTGGATaGTCCAGGGTTCACTATGTCTTCACAATTCTGAGCACCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEGPVPCGWCHFWAG*SRVHYVFTILSTLK Trigger: CTTCAGGGTGCTCAGAATTGTGAAGACATAGTGAACCCTGGACCATCCAGCCCAGAAATGGCACCACCCGCAGGGGACTGGGCCCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS TCA 90 bp | TCAGGAGCTGAATCTGTAACCATGGTGCTGGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCCCGCCCACCACCTGCTTTAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGAESVTMVLARCGN*TLPGASRPPPALKL Trigger: CAATTTTAAAGCAGGTGGTGGGCGGGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGCCAGCACCATGGTTACAGATTCAGCTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS TCA 90 bp | GGGTGGATGGGAGCAGCTTACAGGCCAACAGCCCTTCATTGCCTATaGCGTCAATCACACGAAGTCTCAGGTTCTGCTGCAGCTCTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GWMGAAYRPTALHCL*RQSHEVSGSAAALL Trigger: TAACAGAGCTGCAGCAGAACCTGAGACTTCGTGTGATTGACGTCATAGGCAATGAAGGGCTGTTGGCCTGTAAGCTGCTCCCATCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS TCA 90 bp | AGACTTCCATGTTGTTATCAGCAAATAAAGAAGGCACAGGCAAGCTaGCACTCTCGAGCTTCTCAGCTGAGGGCGGCCCCGAGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLPCCYQQIKKAQAS*HSRASQLRAAPRET Trigger: AGTCTCTCTCGGGGCCGCCCTCAGCTGAGAAGCTCGAGAGTGTCAGCTTGCCTGTGCCTTCTTTATTTGCTGATAACAACATGGAAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGTCTCGGCACTGTTTCCAGATATATCAGAGCCCAGGGAAATGCCAGCCGGGAGAAGAATGAGCTaGAGGTGTCAACTTGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPVSALFPDISEPREMPAGRRMS*RCQLGY Trigger: GTAACCAAGTTGACACCTCAAGCTCATTCTTCTCCC...GGCTGGCATTTCCCTGGGCTCTGATATATCTGGAAACAGTGCCGAGACAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS-3UTR CAA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCATTCTCTTCTTCGTGCTaGGATGAGAGTGCAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: KLSSGPLEGQQALLTAESFSSSC*DESAVT Trigger: CGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAA...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCCCATCTTCAAACTGCTaGTCTCTTTCAGCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGDEQSLCPLHQSRELSLPSSNC*SLSALS Trigger: AGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGG...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCTCGCTTTGGGCTACCTaGAGTTTTGATTTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGDEQSLCPLHQSRELSLSLWAT*SFDFLL Trigger: CAGGAGGAAATCAAAACTCAAGGTAGCCCAAAGCGA...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCTTCTCTTCTTCGTGCTaGGATGAGAGTGCAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLFSSSC*DESAVT Trigger: CGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAA...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTCGGAGCAGAAACAGTaGCCTTCAGACTACTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLETELGSSRRAASTLNCSEQKQ*PSDYSV Trigger: AACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGA...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS GCA 90 bp | GTCGTGGTCGGAGCAGAAACAGTTGCCTTCAGACTACTCAGTTCCTaGTGGATTAATTTCTCTTCTTCGTGCTTGGATGAGAGTGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VVVGAETVAFRLLSS*WINFSSSCLDESAV Trigger: CACTGCACTCTCATCCAAGCACGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCACGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS GCA 90 bp | GACACAGACACGGCTTCATTACTGCAGATTTCCACGAGACCTGAATaGCTGCACTCAGGAGTTTCTTCCTTGACAGTTGAAGTTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DTDTASLLQISTRPE*LHSGVSSLTVEVAE Trigger: CTCTGCAACTTCAACTGTCAAGGAAGAAACTCCTGAGTGCAGGCATTCAGGTCTCGTGGAAATCTGCAGTAATGAAGCCGTGTCTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CCA 90 bp | GTGGTCGGAGCAGAAACAGTTGCCTTCAGACTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCGTGCTTGGATGAGAGTGCAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: VVGAETVAFRLLSSC*INFSSSCLDESAVT Trigger: CGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CAA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTATGGTTATCTGGTGTaGAAGAGCCAGAGAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: VLETELGSSRRAASTLNCYGYLV*KSQRRI Trigger: GATCCTTCTCTGGCTCTTCAACACCAGATAACCATA...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CAA 90 bp | TACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTCGGGAGAAGAATGAGCTaGAGGTGTCAACTTGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: YSRFCTPKPSVIQVMSSLGRRMS*RCQLGY Trigger: GTAACCAAGTTGACACCTCAAGCTCATTCTTCTCCC...GAGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS TCA 90 bp | AGTAGGAGCGCTGGGTGTCTTGTCGCTTTGGGCTACCTTGAGTTTTaGTTTCCTCCTGAACTTGTGAGACACAACATCTGCTTTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRSAGCLVALGYLEF*FPPELVRHNICFSQ Trigger: TTGGGAAAAGCAGATGTTGTGTCTCACAAGTTCAGGAGGAAATCAAAACTCAAGGTAGCCCAAAGCGACAAGACACCCAGCGCTCCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTTCGGAGCAGAAACAGTaGCCTTCAGACTACTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSSEQKQ*PSDYSV Trigger: AACTGAGTAGTCTGAAGGCAACTGTTTCTGCTCCGA...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | TCAGGTGATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SGDEQSLCPLHQSRELSLNFPMH*AAFSSN Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...GAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATCACCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | GATGAGCAGTCTCTGTGTCCCCTGCACCAAAGCAGAGAACTGAGTCTCAGCCTTCACCCAACTCATAACTaGAAGAAATCTCTGTGGATA | + |
|
Preference number: 5 (lower is better) Translates to: DEQSLCPLHQSRELSLSLHPTHN*KKSLWI Trigger: TATCCACAGAGATTTCTTCAAGTTATGAGTTGGGTG...AAGGCTGAGACTCAGTTCTCTGCTTTGGTGCAGGGGACACAGAGACTGCTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | GAGCCGAGAGCACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGCCACCTGCTTTAAAATaGTTACAAAACTCTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EPRAQIFLTAGSALQSQVPPALK*LQNSPS Trigger: TGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGG...CACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTGCTCTCGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | GTATTGGAAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCCCACCTGCTTTAAAATaGTTACAAAACTCTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLETELGSSRRAASTLNCPPALK*LQNSPS Trigger: TGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGG...GCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTTCCAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCAAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: KLSSGPLEGQQALLTAESNFPMH*AAFSSN Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS-3UTR CAA 90 bp | TTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGAGCAGTCTTATGGTTATCTGGTGTaGAAGAGCCAGAGAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: LQQVLHSKAKCDSGDEQSYGYLV*KSQRRI Trigger: GATCCTTCTCTGGCTCTTCAACACCAGATAACCATA...AGACTGCTCATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | CACAGATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTAGCAGTCTCAGGAAGTaGCTGAGAATATCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: HRFSLQQVLHSKAKCDSGSSLRK*LRISGC Trigger: GCATCCAGATATTCTCAGCAACTTCCTGAGACTGCT...ACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | AGCATTCATTGTCTGAATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGTTCTCTTCTTCGTGCTaGGATGAGAGTGCAGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: SIHCLNKPHVVRSIFLSQFSSSC*DESAVT Trigger: CGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAA...CTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGAGCTCGGGTCCTCTAGAAGGGCAGCAAGCACTCTTAACTGCTGAGTCACATACATTAATTCACTaGTCCTTTCATCGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KLSSGPLEGQQALLTAESHTLIH*SFHRLS Trigger: GGAAAGACGATGAAAGGACAAGTGAATTAATGTATG...TGACTCAGCAGTTAAGAGTGCTTGCTGCCCTTCTAGAGGACCCGAGCTCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110394.8 |
||
| CDS TCA 90 bp | GAGAGAGTCCCCTCTATACAAGGGCTTTCCATCTGCACACTGTATTaGAAGGATTTGGTGCGTTCTGTTTCTATCACAGGAGAAGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: ERVPSIQGLSICTLY*KDLVRSVSITGEEH Trigger: ATGTTCTTCTCCTGTGATAGAAACAGAACGCACCAAATCCTTTCAATACAGTGTGCAGATGGAAAGCCCTTGTATAGAGGGGACTCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | TCCATCTTCAAACTGCTTGTCTCTTTCAGCCCTGTCTCGGCACTGTTTCCAGATCCACCTGCTTTAAAATaGTTACAAAACTCTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SIFKLLVSFSPVSALFPDPPALK*LQNSPS Trigger: TGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGG...ATCTGGAAACAGTGCCGAGACAGGGCTGAAAGAGACAAGCAGTTTGAAGATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177372.8 |
||
| CDS-3UTR CAA 90 bp | ATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAAACCATAGAGAGCTGTTCCTCTaGGCGCTGGTGATGGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ITSTTSAFYFGKVIDVNHRELFL*ALVMGL Trigger: AAGCCCCATCACCAGCGCCAAGAGGAACAGCTCTCT...ATGGTTTACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CCA 90 bp | CCTCTATACAAGGGCTTTCCATCTGCACACTGTATTGAAAGGATTTaGTGCGTTCTGTTTCTATCACAGGAGAAGAACATTCAGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PLYKGFPSAHCIERI*CVLFLSQEKNIQVA Trigger: AGCAACCTGAATGTTCTTCTCCTGTGATAGAAACAGAACGCACCAAATCCTTTCAATACAGTGTGCAGATGGAAAGCCCTTGTATAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | AGCATTCATTGTCTGAATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGTATGGTTATCTGGTGTaGAAGAGCCAGAGAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SIHCLNKPHVVRSIFLSQYGYLV*KSQRRI Trigger: GATCCTTCTCTGGCTCTTCAACACCAGATAACCATA...CTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATTCAGACAATGAATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS-3UTR CAA 90 bp | GATTTTCCTTACAGCAGGTTCTGCACTCCAAAGCCAAGTGTGATTCAGGTGATGCATACATTAATTCACTaGTCCTTTCATCGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFPYSRFCTPKPSVIQVMHTLIH*SFHRLS Trigger: GGAAAGACGATGAAAGGACAAGTGAATTAATGTATG...CATCACCTGAATCACACTTGGCTTTGGAGTGCAGAACCTGCTGTAAGGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | AATAAACCACACGTTGTCAGGAGCATATTTCTCAGCCAGCTCAGCAATTCTGCCCATACATTAATTCACTaGTCCTTTCATCGTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NKPHVVRSIFLSQLSNSAHTLIH*SFHRLS Trigger: GGAAAGACGATGAAAGGACAAGTGAATTAATGTATG...GGCAGAATTGCTGAGCTGGCTGAGAAATATGCTCCTGACAACGTGTGGTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS GCA 90 bp | AGGACAGAAGTCAGAGCAACTCCAGGCTCTGATATTTTTATAGTTTaGTTCACATCATTTGCAAAGGACAACCAGAGTTTGCCAAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RTEVRATPGSDIFIV*FTSFAKDNQSLPKS Trigger: AGACTTTGGCAAACTCTGGTTGTCCTTTGCAAATGATGTGAAGCAAACTATAAAAATATCAGAGCCTGGAGTTGCTCTGACTTCTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | CCATCACACACACAAGGCATAATCTCTTCTTTTACTAATAGAGGGCCTAGAAGCTTTGCTTCACATCATTaGCAAAGGACAACCAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSHTQGIISSFTNRGPRSFASHH*QRTTRV Trigger: AACTCTGGTTGTCCTTTGCAAATGATGTGAAGCAAA...GCTTCTAGGCCCTCTATTAGTAAAAGAAGAGATTATGCCTTGTGTGTGTGATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | AGAATATCTGGATGCATTACATCTCCTCCCACTGAAAACACAGCATTCATTGTCCCACCTGCTTTAAAATaGTTACAAAACTCTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RISGCITSPPTENTAFIVPPALK*LQNSPS Trigger: TGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGG...GACAATGAATGCTGTGTTTTCAGTGGGAGGAGATGTAATGCATCCAGATATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCATCATCAAAACCTTCTGCTAGCAGTCTCAGGAAGTTGCTGAGAATATCTAATTTTCCAATGCACTaGGCAGCCTTCTCAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSSSKPSASSLRKLLRISNFPMH*AAFSSN Trigger: ATTACTTGAGAAGGCTGCCAAGTGCATTGGAAAATT...AGATATTCTCAGCAACTTCCTGAGACTGCTAGCAGAAGGTTTTGATGATGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175663.8 |
||
| CDS-3UTR CAA 90 bp | ACCTCCATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAGGTTGCTCAATGATCTaGAAATTTTCCACAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSITSTTSAFYFGKVIDVGCSMI*KFSTGK Trigger: TTTTCCTGTGGAAAATTTCAAGATCATTGAGCAACC...TACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGATGGAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS-3UTR CAA 90 bp | ATCACAAGTACCACGAGTGCTTTTTACTTTGGTAAGGTTATAGATGTAAACCATCATGGAAAATTCCAGTaGAACAGAATGCGTATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ITSTTSAFYFGKVIDVNHHGKFQ*NRMRIH Trigger: ATGGATACGCATTCTGTTCAACTGGAATTTTCCATG...ATGGTTTACATCTATAACCTTACCAAAGTAAAAAGCACTCGTGGTACTTGTGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS GCA 72 bp | GGTGCTCTGGAGGCCGCAGGTCCTCCCAGCTGGTTCTaGAGGAAGAGCCCCGGCAGTGCGGTCAGCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GALEAAGPPSWF*RKSPGSAVSVL Trigger: GAGGACGCTGACCGCACTGCCGGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGCGGCCTCCAGAGCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002063.15 ENSMUST00000110393.2 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS CCA 72 bp | AAGAAGGGTGCTCTGGAGGCCGCAGGTCCTCCCAGCTaGTTCTGCAGGAAGAGCCCCGGCAGTGCGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KKGALEAAGPPS*FCRKSPGSAVS Trigger: GCTGACCGCACTGCCGGGGCTCTTCCTGCAGAACCAGCTGGGAGGACCTGCGGCCTCCAGAGCACCCTTCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002063.15 ENSMUST00000110393.2 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS CCA 72 bp | AGCATGTACTCGGCAGTGCAGCACACAGGGGGTGGATaGGAGCAGCTTACAGGCCAACAGCCCTTCATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SMYSAVQHTGGG*EQLTGQQPFIA Trigger: GGCAATGAAGGGCTGTTGGCCTGTAAGCTGCTCCCATCCACCCCCTGTGTGCTGCACTGCCGAGTACATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CCA 72 bp | TTGGAGGGCCCAGTCCCCTGCGGGTGGTGCCATTTCTaGGCTGGATGGTCCAGGGTTCACTATGTCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: LEGPVPCGWCHF*AGWSRVHYVFT Trigger: TGTGAAGACATAGTGAACCCTGGACCATCCAGCCCAGAAATGGCACCACCCGCAGGGGACTGGGCCCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS TCA 72 bp | GAATCTGTAACCATGGTGCTGGCACGCTGTGGTAACTaGACTCTACCGGGAGCTTCCCGCCCACCACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ESVTMVLARCGN*TLPGASRPPPA Trigger: AGCAGGTGGTGGGCGGGAAGCTCCCGGTAGAGTTCAGTTACCACAGCGTGCCAGCACCATGGTTACAGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS CCA 72 bp | GGGCCCAGTCCCCTGCGGGTGGTGCCATTTCTGGGCTaGATGGTCCAGGGTTCACTATGTCTTCACAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSPLRVVPFLG*MVQGSLCLHNS Trigger: AGAATTGTGAAGACATAGTGAACCCTGGACCATCCAGCCCAGAAATGGCACCACCCGCAGGGGACTGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS CCA 72 bp | CCAGTCCCCTGCGGGTGGTGCCATTTCTGGGCTGGATaGTCCAGGGTTCACTATGTCTTCACAATTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVPCGWCHFWAG*SRVHYVFTILS Trigger: GCTCAGAATTGTGAAGACATAGTGAACCCTGGACCATCCAGCCCAGAAATGGCACCACCCGCAGGGGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142740.2 |
||
| CDS TCA 72 bp | TGTTGTTATCAGCAAATAAAGAAGGCACAGGCAAGCTaGCACTCTCGAGCTTCTCAGCTGAGGGCGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: CCYQQIKKAQAS*HSRASQLRAAP Trigger: CGGGGCCGCCCTCAGCTGAGAAGCTCGAGAGTGTCAGCTTGCCTGTGCCTTCTTTATTTGCTGATAACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CAA 90 bp | TTCAGACTACTCAGTTCCTGCTGGATTAATTTCTCTTCTTCGTGCTaGGATGAGAGTGCAGTGACGCCACGGATGAGGCCGCCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FRLLSSCWINFSSSC*DESAVTPRMRPPSL Trigger: CAGGCTGGGCGGCCTCATCCGTGGCGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS TCA 72 bp | GGAGCAGCTTACAGGCCAACAGCCCTTCATTGCCTATaGCGTCAATCACACGAAGTCTCAGGTTCTGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GAAYRPTALHCL*RQSHEVSGSAA Trigger: TGCAGCAGAACCTGAGACTTCGTGTGATTGACGTCATAGGCAATGAAGGGCTGTTGGCCTGTAAGCTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CAA 72 bp | CTCAGTTCCTGCTGGATTAATTTCTCTTCTTCGTGCTaGGATGAGAGTGCAGTGACGCCACGGATGAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSSCWINFSSSC*DESAVTPRMRP Trigger: CGGCCTCATCCGTGGCGTCACTGCACTCTCATCCAAGCACGAAGAAGAGAAATTAATCCAGCAGGAACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS CAA 72 bp | GTGGATGGGAGCAGCTTACAGGCCAACAGCCCTTCATaGCCTATGACGTCAATCACACGAAGTCTCAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VDGSSLQANSPS*PMTSITRSLRF Trigger: GAACCTGAGACTTCGTGTGATTGACGTCATAGGCAATGAAGGGCTGTTGGCCTGTAAGCTGCTCCCATCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS TCA 72 bp | GCTGGGTGTCTTGTCGCTTTGGGCTACCTTGAGTTTTaGTTTCCTCCTGAACTTGTGAGACACAACATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AGCLVALGYLEF*FPPELVRHNIC Trigger: GCAGATGTTGTGTCTCACAAGTTCAGGAGGAAATCAAAACTCAAGGTAGCCCAAAGCGACAAGACACCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CAA 72 bp | CTACCGGGAGCTTCCCGCCCACCACCTGCTTTAAAATaGTTACAAAACTCTCCGTCAAGTCTTTATAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LPGASRPPPALK*LQNSPSSLYSQ Trigger: CTGGCTATAAAGACTTGACGGAGAGTTTTGTAACAATTTTAAAGCAGGTGGTGGGCGGGAAGCTCCCGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
||
| CDS GCA 72 bp | ACGGCTTCATTACTGCAGATTTCCACGAGACCTGAATaGCTGCACTCAGGAGTTTCTTCCTTGACAGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TASLLQISTRPE*LHSGVSSLTVE Trigger: TTCAACTGTCAAGGAAGAAACTCCTGAGTGCAGGCATTCAGGTCTCGTGGAAATCTGCAGTAATGAAGCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CAA 90 bp | ACAGTTGAAGTTGCAGAGGATGAAGGGGGATTAAAGACTTCCATGTaGTTATCAGCAAATAAAGAAGGCACAGGCAAGCTGACACTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TVEVAEDEGGLKTSM*LSANKEGTGKLTLS Trigger: CGAGAGTGTCAGCTTGCCTGTGCCTTCTTTATTTGCTGATAACAACATGGAAGTCTTTAATCCCCCTTCATCCTCTGCAACTTCAACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS CAA 90 bp | AGAGAGAGTCCCCTCTATACAAGGGCTTTCCATCTGCACACTGTATaGAAAGGATTTGGTGCGTTCTGTTTCTATCACAGGAGAAGAACA | + |
|
Preference number: 6 (lower is better) Translates to: RESPLYTRAFHLHTV*KGFGAFCFYHRRRT Trigger: TGTTCTTCTCCTGTGATAGAAACAGAACGCACCAAATCCTTTCAATACAGTGTGCAGATGGAAAGCCCTTGTATAGAGGGGACTCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
||
| CDS TCA 72 bp | CCCTCTATACAAGGGCTTTCCATCTGCACACTGTATTaGAAGGATTTGGTGCGTTCTGTTTCTATCACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSIQGLSICTLY*KDLVRSVSITG Trigger: TCCTGTGATAGAAACAGAACGCACCAAATCCTTTCAATACAGTGTGCAGATGGAAAGCCCTTGTATAGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| CDS CCA 72 bp | GCAGAAACAGTTGCCTTCAGACTACTCAGTTCCTGCTaGATTAATTTCTCTTCTTCGTGCTTGGATGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: AETVAFRLLSSC*INFSSSCLDES Trigger: ACTCTCATCCAAGCACGAAGAAGAGAAATTAATCCAGCAGGAACTGAGTAGTCTGAAGGCAACTGTTTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002063.15 ENSMUST00000110394.8 ENSMUST00000175663.8 ENSMUST00000177372.8 |
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| CDS CAA 72 bp | GTTGCAGAGGATGAAGGGGGATTAAAGACTTCCATGTaGTTATCAGCAAATAAAGAAGGCACAGGCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: VAEDEGGLKTSM*LSANKEGTGKL Trigger: CAGCTTGCCTGTGCCTTCTTTATTTGCTGATAACAACATGGAAGTCTTTAATCCCCCTTCATCCTCTGCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| CDS CAA 72 bp | GTTTGCTTCACATCATTTGCAAAGGACAACCAGAGTTaGCCAAAGTCTTCAGTTGAGATCTTTAATGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: VCFTSFAKDNQS*PKSSVEIFNGL Trigger: TAGACCATTAAAGATCTCAACTGAAGACTTTGGCAAACTCTGGTTGTCCTTTGCAAATGATGTGAAGCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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| CDS CAA 72 bp | GCGTTCTGTTTCTATCACAGGAGAAGAACATTCAGGTaGCTCAATGATCTTGAAATTTTCCACAGGAAAAAT | + |
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Preference number: 6 (lower is better) Translates to: AFCFYHRRRTFR*LNDLEIFHRKN Trigger: ATTTTTCCTGTGGAAAATTTCAAGATCATTGAGCAACCTGAATGTTCTTCTCCTGTGATAGAAACAGAACGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002063.15 |
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