Pregenerated sensors for AP4B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032952Ensembl transcript IDs: ENSMUST00000047285.7, ENSMUST00000076599.8, ENSMUST00000106823.8, ENSMUST00000106824.8, ENSMUST00000199686.2, ENSMUST00000200377.5
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | AATGCAGCAGCCGTCCCAGCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: NAAAVPACPGTQPGARGQEDGSL*KVSSHV Trigger: GACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTC...TTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACGGCTGCTGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CCA 90 bp | GCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGGCGCATCAGTGCGGTCATACCTATGGCGAAGATaGCAGCCTGTGCAAAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ACPGTQPGARGQGASVRSYLWRR*QPVQSQ Trigger: CTGACTTTGCACAGGCTGCCATCTTCGCCATAGGTA...TGACCGCACTGATGCGCCTTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CCA 90 bp | TCCTGGCACTCAGCCGGGCGCGAGAGGACAAGGCGCATCAGTGCGGTCAGTAGCACTGCTAAAGTGACCTaGCAAACTGTGCAAGACCTG | + |
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Preference number: 4 (lower is better) Translates to: SWHSAGRERTRRISAVSSTAKVT*QTVQDL Trigger: CAGGTCTTGCACAGTTTGCCAGGTCACTTTAGCAGT...GCTACTGACCGCACTGATGCGCCTTGTCCTCTCGCGCCCGGCTGAGTGCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CCA 90 bp | CTCTATGCAGTAATGCAGCAGCCGTCCCAGCATGTCCTGGCACTCAGCCGGGCGTGGCAATGCTACCTATaGCGAAGATGGCAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LYAVMQQPSQHVLALSRAWQCYL*RRWQPV Trigger: CACAGGCTGCCATCTTCGCCATAGGTAGCATTGCCA...CGCCCGGCTGAGTGCCAGGACATGCTGGGACGGCTGCTGCATTACTGCATAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR TCA 90 bp | AGCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGGCGCATCAGTGCGGTCAGCGGGAAATGTCTCTaGCTTCACGTTGTCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: SMSWHSAGRERTRRISAVSGKCL*LHVVYK Trigger: TTTGTAGACAACGTGAAGTCAGAGACATTTCCCGCT...GACCGCACTGATGCGCCTTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CCA 90 bp | AATGCAGCAGCCGTCCCAGCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGATCTGTGTAAGTCTTaGCAATGCTACCTATGGCGA | + |
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Preference number: 4 (lower is better) Translates to: NAAAVPACPGTQPGARGQDLCKS*QCYLWR Trigger: TCGCCATAGGTAGCATTGCCAAGACTTACACAGATC...TTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACGGCTGCTGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCGTCCCAGCATGTCCTaGCACTCAGCCGGGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFRPSMS*HSAGRE Trigger: CTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACGTCCCAGCATGTCCTaGCACTCAGCCGGGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFERPSMS*HSAGRE Trigger: CTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACGTCCCAGCATGTCCTaGCACTCAGCCGGGCGCGAG | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPRPSMS*HSAGRE Trigger: CTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAGCTCACGGCTCTCTaGAGAGCAGGCGGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFELTAL*RAGGQQ Trigger: TTGCTGGCCGCCTGCTCTTCAGAGAGCCGTGAGCTC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGAGCTCACGGCTCTCTaGAGAGCAGGCGGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEELTAL*RAGGQQ Trigger: TTGCTGGCCGCCTGCTCTTCAGAGAGCCGTGAGCTC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTTGCCCAGTGGGCTCTaGCATACACTGGCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFLPSGL*HTLAPV Trigger: CACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGGCTTTCCAGGGCTGTaGCCCAGCTCTGCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFGFPGL*PSSAHC Trigger: GCAATGAGCAGAGCTGGGGCACAGCCCTGGAAAGCC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATTGCCCAGTGGGCTCTaGCATACACTGGCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELPSGL*HTLAPV Trigger: CACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATTGCCCAGTGGGCTCTaGCATACACTGGCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPLPSGL*HTLAPV Trigger: CACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGGCTGGACTTCTCCCTaGCAAGGAAACACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFGWTSP*QGNTCW Trigger: CCAGCAGGTGTTTCCTTGGCAGGGAGAAGTCCAGCC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGGCTTTCCAGGGCTGTaGCCCAGCTCTGCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEGFPGL*PSSAHC Trigger: GCAATGAGCAGAGCTGGGGCACAGCCCTGGAAAGCC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCATTGGGTTGGGGTCTaGGCAGTCTTTGCAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFHWVGV*AVFAER Trigger: ACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACAGTTCCTCCTCACTaGGGGGTTGGTAGCGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTVPPH*GVGSGA Trigger: TGCTCCGCTACCAACCCCGCAGTGAGGAGGAACTGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFEDGSL*KVSSHV Trigger: GACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGGCTGGACTTCTCCCTaGCAAGGAAACACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEGWTSP*QGNTCW Trigger: CCAGCAGGTGTTTCCTTGGCAGGGAGAAGTCCAGCC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGGCTGGACTTCTCCCTaGCAAGGAAACACCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPGWTSP*QGNTCW Trigger: CCAGCAGGTGTTTCCTTGGCAGGGAGAAGTCCAGCC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGCTGTGCCCCAGCTCTaGTCATTGCGATGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFAVPQL*SLRWSE Trigger: TTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACATTGGGTTGGGGTCTaGGCAGTCTTTGCAGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEHWVGV*AVFAER Trigger: ACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGCACACCAGGCATCCTaGGGCTACACATACTCCGTA | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPAHQAS*GYTYSV Trigger: TACGGAGTATGTGTAGCCTCAGGATGCCTGGTGTGC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTTCCCCTCACTGTCTTaGATGTTCTCCTCACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFFPSLS*MFSSQP Trigger: CGGCTGTGAGGAGAACATTCAAGACAGTGAGGGGAA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTATCATCCTGAGCACTaGGGTAGGCTTTCCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFYHPEH*GRLSRA Trigger: AGCCCTGGAAAGCCTACCTCAGTGCTCAGGATGATA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEEDGSL*KVSSHV Trigger: GACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPEDGSL*KVSSHV Trigger: GACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGCTGTGCCCCAGCTCTaGTCATTGCGATGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEAVPQL*SLRWSE Trigger: TTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGCTGTGCCCCAGCTCTaGTCATTGCGATGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPAVPQL*SLRWSE Trigger: TTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTCAGAAAGAGTTTGGTaGCTCCCATCACCACGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFSERVW*LPSPRQ Trigger: CTGGCGTGGTGATGGGAGCCACCAAACTCTTTCTGA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGGCTCTGCCATACACTaGCGCCAGTGTGTTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPGSAIH*RQCVEV Trigger: GACTTCAACACACTGGCGCCAGTGTATGGCAGAGCC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGGCTCTGCCATACACTaGCGCCAGTGTGTTGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEGSAIH*RQCVEV Trigger: GACTTCAACACACTGGCGCCAGTGTATGGCAGAGCC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGAGATAGTTGCCCAGTaGGCTCTGCCATACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEEIVAQ*ALPYTG Trigger: GCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGAGATAGTTGCCCAGTaGGCTCTGCCATACACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPEIVAQ*ALPYTG Trigger: GCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTGTAGAGTGTCAGGCTaGACTTCTCCCTGCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFCRVSG*TSPCQG Trigger: TCCTTGGCAGGGAGAAGTCCAGCCTGACACTCTACA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATCTGCACGACCACTATaGCGAAGATGGCAGCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSARPL*RRWQPV Trigger: CACAGGCTGCCATCTTCGCCATAGTGGTCGTGCAGA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACAGCTTCAGTACACTaGGGGCATAACCAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTASVH*GHNQTR Trigger: CCTGGTCTGGTTATGCCCTCAGTGTACTGAAGCTGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATTCCCCTCACTGTCTTaGATGTTCTCCTCACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEFPSLS*MFSSQP Trigger: CGGCTGTGAGGAGAACATTCAAGACAGTGAGGGGAA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGATTGGGGACCAGCATaGGAGTGTCAGAATCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFDWGPA*ECQNQV Trigger: AACCTGATTCTGACACTCTCATGCTGGTCCCCAATC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATATCATCCTGAGCACTaGGGTAGGCTTTCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEYHPEH*GRLSRA Trigger: AGCCCTGGAAAGCCTACCTCAGTGCTCAGGATGATA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCCCAGCTCTGCTCATTaGGATGGTCTGAATGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFPSSAH*DGLNVH Trigger: GTGAACATTCAGACCATCGCAATGAGCAGAGCTGGG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAGGTCTCGGAAAGTCTaGACGACCACTATGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPRSRKV*TTTMAK Trigger: CTTCGCCATAGTGGTCGTGCAGACTTTCCGAGACCT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACTCGAACCATTGGGTTaGGGTCTGAGCAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELEPLG*GLSSLC Trigger: GCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCGAACCATTGGGTTaGGGTCTGAGCAGTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPLEPLG*GLSSLC Trigger: GCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTCAGCCTGGCCCCACTaGTCCAGTTTTGACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFSAWPH*SSFDIL Trigger: TAGAATGTCAAAACTGGACCAGTGGGGCCAGGCTGA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTTCAGTACTTCAGCCTaGCCCCACTGGTCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFFSTSA*PHWSSF Trigger: AAAACTGGACCAGTGGGGCCAGGCTGAAGTACTGAA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATCAGAAAGAGTTTGGTaGCTCCCATCACCACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESERVW*LPSPRQ Trigger: CTGGCGTGGTGATGGGAGCCACCAAACTCTTTCTGA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATCAGAAAGAGTTTGGTaGCTCCCATCACCACGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSERVW*LPSPRQ Trigger: CTGGCGTGGTGATGGGAGCCACCAAACTCTTTCTGA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTACCTATGGCGAAGATaGCAGCCTGTGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFYLWRR*QPVQSQ Trigger: CTGACTTTGCACAGGCTGCCATCTTCGCCATAGGTA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATGGCAATGCTACCTATaGCGAAGATGGCAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEWQCYL*RRWQPV Trigger: CACAGGCTGCCATCTTCGCCATAGGTAGCATTGCCA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATGGCAATGCTACCTATaGCGAAGATGGCAGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPWQCYL*RRWQPV Trigger: CACAGGCTGCCATCTTCGCCATAGGTAGCATTGCCA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTACTCAGCAGTAAGCTaGAGATTGGGGACCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFYSAVS*RLGTSM Trigger: CATGCTGGTCCCCAATCTCCAGCTTACTGCTGAGTA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATGTAGAGTGTCAGGCTaGACTTCTCCCTGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFECRVSG*TSPCQG Trigger: TCCTTGGCAGGGAGAAGTCCAGCCTGACACTCTACA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACCACTATGGCGAAGATaGCAGCCTGTGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEPLWRR*QPVQSQ Trigger: CTGACTTTGCACAGGCTGCCATCTTCGCCATAGTGG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCAGTGTGTTGAAGTCTaGAGCCCAGCTATTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFQCVEV*SPAIYW Trigger: CCAGTAAATAGCTGGGCTTCAGACTTCAACACACTG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGATTGGGGACCAGCATaGGAGTGTCAGAATCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPDWGPA*ECQNQV Trigger: AACCTGATTCTGACACTCTCATGCTGGTCCCCAATC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCCTTTTCTTCCTCTATaGAGTAATGCAGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFPFLPL*SNAAAV Trigger: GACGGCTGCTGCATTACTGCATAGAGGAAGAAAAGG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGCATTTAGAGATAGTTaGCCAGTGGGCTCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFAFRDS*PVGSAI Trigger: TATGGCAGAGCCCACTGGGCAACTATCTCTAAATGC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCGATGCCGCTCTACCTaGTGGCATTTAGAGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFRCRST*WHLEIV Trigger: AACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACCCAGCTCTGCTCATTaGGATGGTCTGAATGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPPSSAH*DGLNVH Trigger: GTGAACATTCAGACCATCGCAATGAGCAGAGCTGGG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTACCACAATTGGATCCTaGTCACGCAGAAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFTTIGS*SRRRLY Trigger: GTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATCAGCCTGGCCCCACTaGTCCAGTTTTGACATTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESAWPH*SSFDIL Trigger: TAGAATGTCAAAACTGGACCAGTGGGGCCAGGCTGA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATACCTATGGCGAAGATaGCAGCCTGTGCAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEYLWRR*QPVQSQ Trigger: CTGACTTTGCACAGGCTGCCATCTTCGCCATAGGTA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATCAAGTGCCCTGATGTaGCAAAGGATGCATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSSALM*QRMHCG Trigger: CCCACAATGCATCCTTTGCCACATCAGGGCACTTGA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATCAAGTGCCCTGATGTaGCAAAGGATGCATTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESSALM*QRMHCG Trigger: CCCACAATGCATCCTTTGCCACATCAGGGCACTTGA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATACTCAGCAGTAAGCTaGAGATTGGGGACCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPYSAVS*RLGTSM Trigger: CATGCTGGTCCCCAATCTCCAGCTTACTGCTGAGTA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATACTCAGCAGTAAGCTaGAGATTGGGGACCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEYSAVS*RLGTSM Trigger: CATGCTGGTCCCCAATCTCCAGCTTACTGCTGAGTA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGACATGTCCAAGCCCTaGGTCATGTGCCTAATAACT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPDMSKP*VMCLIT Trigger: AGTTATTAGGCACATGACTCAGGGCTTGGACATGTC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTTTGCAGAGCGTATTaGTGGCCAAGAGTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPLCRAY*WPRVLD Trigger: ATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACTTTGCAGAGCGTATTaGTGGCCAAGAGTGCTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELCRAY*WPRVLD Trigger: ATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTAGCGGGAAATGTCTCTaGCTTCACGTTGTCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFSGKCL*LHVVYK Trigger: TTTGTAGACAACGTGAAGTCAGAGACATTTCCCGCT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACAGTGTGTTGAAGTCTaGAGCCCAGCTATTTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPQCVEV*SPAIYW Trigger: CCAGTAAATAGCTGGGCTTCAGACTTCAACACACTG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACCTTTTCTTCCTCTATaGAGTAATGCAGCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPPFLPL*SNAAAV Trigger: GACGGCTGCTGCATTACTGCATAGAGGAAGAAAAGG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGCATTTAGAGATAGTTaGCCAGTGGGCTCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPAFRDS*PVGSAI Trigger: TATGGCAGAGCCCACTGGGCAACTATCTCTAAATGC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGCATTTAGAGATAGTTaGCCAGTGGGCTCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEAFRDS*PVGSAI Trigger: TATGGCAGAGCCCACTGGGCAACTATCTCTAAATGC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACGATGCCGCTCTACCTaGTGGCATTTAGAGATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPRCRST*WHLEIV Trigger: AACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTTGCTTCACAGAGATTTaGATCTCTGAGTTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFCFTEI*ISEFSG Trigger: GCCTGAGAACTCAGAGATGCAAATCTCTGTGAAGCA...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGATTATGCATTTTaGCACAGCCGAGGACTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFEDYAF*HSRGLL Trigger: TAGCAGTCCTCGGCTGTGCCAAAATGCATAATCTTC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAACCACAATTGGATCCTaGTCACGCAGAAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFETTIGS*SRRRLY Trigger: GTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGT...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACCACAATTGGATCCTaGTCACGCAGAAGACTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTTIGS*SRRRLY Trigger: GTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGTTCACAACCACAATTaGATCCTGGTCACGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEVHNHN*ILVTQK Trigger: CTTCTGCGTGACCAGGATCCAATTGTGGTTGTGAAC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGTTCACAACCACAATTaGATCCTGGTCACGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPVHNHN*ILVTQK Trigger: CTTCTGCGTGACCAGGATCCAATTGTGGTTGTGAAC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAAATCAGAAAGAGTTTaGTGGCTCCCATCACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPKSERV*WLPSPR Trigger: GCGTGGTGATGGGAGCCACCAAACTCTTTCTGATTT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACTGCTAAAGTGACCTaGCAAACTGTGCAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTAKVT*QTVQDL Trigger: CAGGTCTTGCACAGTTTGCCAGGTCACTTTAGCAGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAACTGCTAAAGTGACCTaGCAAACTGTGCAAGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFETAKVT*QTVQDL Trigger: CAGGTCTTGCACAGTTTGCCAGGTCACTTTAGCAGT...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACAGTACTGCTGCTCTTaGGATAGCTGTCCAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPQYCCS*DSCPTN Trigger: ATTTGTTGGACAGCTATCTCAAGAGCAGCAGTACTG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACAGTACTGCTGCTCTTaGGATAGCTGTCCAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEQYCCS*DSCPTN Trigger: ATTTGTTGGACAGCTATCTCAAGAGCAGCAGTACTG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAGCGGGAAATGTCTCTaGCTTCACGTTGTCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSGKCL*LHVVYK Trigger: TTTGTAGACAACGTGAAGTCAGAGACATTTCCCGCT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAAGCGGGAAATGTCTCTaGCTTCACGTTGTCTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESGKCL*LHVVYK Trigger: TTTGTAGACAACGTGAAGTCAGAGACATTTCCCGCT...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTAGAATCAGGTTCTTGTaGACCTTCTTTGTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFRIRFL*TFFVLL Trigger: GAGGAGAACAAAGAAGGTGCACAAGAACCTGATTCT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATGCTTCACAGAGATTTaGATCTCTGAGTTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPCFTEI*ISEFSG Trigger: GCCTGAGAACTCAGAGATGCAAATCTCTGTGAAGCA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGTCCTTGCCTTACTTTaGTTCACAGAGATTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFVLALL*FTEICI Trigger: GATGCAAATCTCTGTGAAGCAAAGTAAGGCAAGGAC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAACAGAAACAAAACCATaGAGGGATTCAGTCCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFETETKP*RDSVLA Trigger: GGCAAGGACTGAATCCCTGCATGGTTTTGTTTCTGT...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGATCTGTGTAAGTCTTaGCAATGCTACCTATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPDLCKS*QCYLWR Trigger: TCGCCATAGGTAGCATTGCCAAGACTTACACAGATC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGATCTGTGTAAGTCTTaGCAATGCTACCTATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEDLCKS*QCYLWR Trigger: TCGCCATAGGTAGCATTGCCAAGACTTACACAGATC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
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| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCTCTGCTCATTGCGATaGTCTGAATGTTCACTACTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFLCSLR*SECSLL Trigger: AAGTAGTGAACATTCAGACCATCGCAATGAGCAGAG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGTCCTTGCCTTACTTTaGTTCACAGAGATTTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPVLALL*FTEICI Trigger: GATGCAAATCTCTGTGAAGCAAAGTAAGGCAAGGAC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACAATATCTACAGTaGCACTGGCCTTTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFEQYLQ*HWPLPF Trigger: AAATGGTAAAGGCCAGTGCCACTGTAGATATTGTTC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTACAACACCTCCTTCCTaGTTTAAAATTTCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFTTPPS*FKISSR Trigger: TCTAGAGGAAATTTTAAAGCAGGAAGGAGGTGTTGT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGAACAATATCTACAGTaGCACTGGCCTTTACCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPEQYLQ*HWPLPF Trigger: AAATGGTAAAGGCCAGTGCCACTGTAGATATTGTTC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAGCTGTCCAACAAATTaGGAATATCAAACAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSCPTN*EYQTVP Trigger: AGGAACTGTTTGATATTCTCAATTTGTTGGACAGCT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR TCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAAGCTGTCCAACAAATTaGGAATATCAAACAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESCPTN*EYQTVP Trigger: AGGAACTGTTTGATATTCTCAATTTGTTGGACAGCT...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCATTAAAGGTGCGTATGTaGCCATATACAGATAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPLKVRM*PYTDKP Trigger: TGGTTTATCTGTATATGGGCACATACGCACCTTTAA...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATTAAAGGTGCGTATGTaGCCATATACAGATAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELKVRM*PYTDKP Trigger: TGGTTTATCTGTATATGGGCACATACGCACCTTTAA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR GCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACAACACCTCCTTCCTaGTTTAAAATTTCCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTTPPS*FKISSR Trigger: TCTAGAGGAAATTTTAAAGCAGGAAGGAGGTGTTGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACTATTTAAGAGATGGTaGGCAATGGGCTTATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELFKRW*AMGLLM Trigger: CATTAATAAGCCCATTGCCCACCATCTCTTAAATAG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTATTTAAGAGATGGTaGGCAATGGGCTTATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPLFKRW*AMGLLM Trigger: CATTAATAAGCCCATTGCCCACCATCTCTTAAATAG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CCA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAATTCTATTTAAGAGATaGTGGGCAATGGGCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPILFKR*WAMGLL Trigger: TAATAAGCCCATTGCCCACCATCTCTTAAATAGAAT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS TCA 90 bp | CTGGCGGACATGGCAGAGAGCAGCAAAACAGAGCTCACGGCTCTCTaGAGAGCAGGCGGCCAGCAAGGGCCCCTTGACTCGCACAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LADMAESSKTELTAL*RAGGQQGPLDSHKH Trigger: GTGCTTGTGCGAGTCAAGGGGCCCTTGCTGGCCGCCTGCTCTTCAGAGAGCCGTGAGCTCTGTTTTGCTGCTCTCTGCCATGTCCGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 90 bp | CTATGGCGAAGATGGCAGCCTGTGCAAAGTCAGCAGCCACGTCAGTaGAGTAGCCACGCAGCTCTTCCAGCACCTGCTGCACGTTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LWRRWQPVQSQQPRQ*SSHAALPAPAARSR Trigger: ACGAGAACGTGCAGCAGGTGCTGGAAGAGCTGCGTGGCTACTGCACTGACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTCGCCATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000199686.2 ENSMUST00000200377.5 |
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| CDS-3UTR CAA 90 bp | AGCCGTCCCAGCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGGCGCATCAGTAGTGATATGTTCTaGTCGAAGTCCCAGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPSMSWHSAGRERTRRISSDMF*SKSQQL Trigger: GAGTTGCTGGGACTTCGACAAGAACATATCACTACT...GATGCGCCTTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGCTGGGACGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS-3UTR CAA 90 bp | CAGCATGTCCTGGCACTCAGCCGGGCGCGAGAGGACAAGGCGCATCAGTGCGGTGTCTCTGACTTCACGTaGTCTACAAAGTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHVLALSRAREDKAHQCGVSDFT*STKSSN Trigger: GTTGGAGGACTTTGTAGACAACGTGAAGTCAGAGAC...ACCGCACTGATGCGCCTTGTCCTCTCGCGCCCGGCTGAGTGCCAGGACATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199686.2 |
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| CDS CCA 90 bp | AGGCGATGCCGCTCTACCTGCTGGCATTTAGAGATAGTTGCCCAGTaGGCTCTGCCATACACTGGCGCCAGTGTGTTGAAGTCTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRCRSTCWHLEIVAQ*ALPYTGASVLKSEA Trigger: GGCTTCAGACTTCAACACACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS TCA 90 bp | TGCCCAGTGGGCTCTGCCATACACTGGCGCCAGTGTGTTGAAGTCTaGAGCCCAGCTATTTACTGGTCGTTCCGGCTGATCCTCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CPVGSAIHWRQCVEV*SPAIYWSFRLILQK Trigger: CTTTTGGAGGATCAGCCGGAACGACCAGTAAATAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 90 bp | AAGCTCAAGGCGATGCCGCTCTACCTGCTGGCATTTAGAGATAGTTaGCCAGTGGGCTCTGCCATACACTGGCGCCAGTGTGTTGAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: KLKAMPLYLLAFRDS*PVGSAIHWRQCVEV Trigger: GACTTCAACACACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 90 bp | TGCCCTGATGTGGCAAAGGATGCATTGTGGGGAAGCTCAAGGCGATaGCGCTCTACCTGCTGGCATTTAGAGATAGTTGCCCAGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPDVAKDALWGSSRR*RSTCWHLEIVAQWA Trigger: AGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCACATCAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CCA 90 bp | AAGGATGCATTGTGGGGAAGCTCAAGGCGATGCCGCTCTACCTGCTaGCATTTAGAGATAGTTGCCCAGTGGGCTCTGCCATACACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDALWGSSRRCRSTC*HLEIVAQWALPYTG Trigger: GCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS TCA 90 bp | GTAGCAATTCAGCTAAGAAAAGGCCGCCAGTATCATCCTGAGCACTaGGGTAGGCTTTCCAGGGCTGTGCCCCAGCTCTGCTCATTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VAIQLRKGRQYHPEH*GRLSRAVPQLCSLR Trigger: TCGCAATGAGCAGAGCTGGGGCACAGCCCTGGAAAGCCTACCTCAGTGCTCAGGATGATACTGGCGGCCTTTTCTTAGCTGAATTGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 90 bp | TGTGTAAGTCTTGGCAATGCTACCTATGGCGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTCAGTGCAGTAGCCACGCAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVSLGNATYGEDGSL*KVSSHVSAVATQLF Trigger: GAAGAGCTGCGTGGCTACTGCACTGACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTCGCCATAGGTAGCATTGCCAAGACTTACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106824.8 ENSMUST00000199686.2 ENSMUST00000200377.5 |
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| CDS GCA 90 bp | GCAAAGGATGCATTGTGGGGAAGCTCAAGGCGATGCCGCTCTACCTaGTGGCATTTAGAGATAGTTGCCCAGTGGGCTCTGCCATACACT | + |
|
Preference number: 5 (lower is better) Translates to: AKDALWGSSRRCRST*WHLEIVAQWALPYT Trigger: AGTGTATGGCAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS GCA 90 bp | GCCGCCAGTATCATCCTGAGCACTGAGGTAGGCTTTCCAGGGCTGTaGCCCAGCTCTGCTCATTGCGATGGTCTGAATGTTCACTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AASIILSTEVGFPGL*PSSAHCDGLNVHYF Trigger: AAAGTAGTGAACATTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGCCCTGGAAAGCCTACCTCAGTGCTCAGGATGATACTGGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS CCA 90 bp | TTCTCCTCGGAAATCAAGTGCCCTGATGTGGCAAAGGATGCATTGTaGGGAAGCTCAAGGCGATGCCGCTCTACCTGCTGGCATTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSSEIKCPDVAKDAL*GSSRRCRSTCWHLE Trigger: CTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCACATCAGGGCACTTGATTTCCGAGGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCTCCTCACTGCGGGGTaGGTAGCGGAGCAGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFLLTAG*VAEQKV Trigger: AACTTTCTGCTCCGCTACCAACCCCGCAGTGAGGAG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS TCA 90 bp | CTCGAACCATTGGGTTGGGGTCTGAGCAGTCTTTGCAGAGCGTATTaGTGGCCAAGAGTGCTAGATCTGGTTTTAAAGGTGCGTATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LEPLGWGLSSLCRAY*WPRVLDLVLKVRMC Trigger: GCACATACGCACCTTTAAAACCAGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS GCA 90 bp | GAATCAGGTTCTTGTGCACCTTCTTTGTTCTCCTCGGAAATCAAGTaGCCTGATGTGGCAAAGGATGCATTGTGGGGAAGCTCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: ESGSCAPSLFSSEIK*PDVAKDALWGSSRR Trigger: TCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCACATCAGGGCACTTGATTTCCGAGGAGAACAAAGAAGGTGCACAAGAACCTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGGGTCTGAGCAGTCTTaGCAGAGCGTATTGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFGSEQS*QSVLMA Trigger: GGCCATCAATACGCTCTGCAAAGACTGCTCAGACCC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCCTCGAACCATTGGGTaGGGGTCTGAGCAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFPRTIG*GSEQSL Trigger: CAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACCAGTCCTCGAACCATaGGGTTGGGGTCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPPVLEP*GWGLSS Trigger: ACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACCAGTCCTCGAACCATaGGGTTGGGGTCTGAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEPVLEP*GWGLSS Trigger: ACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACTCCTCACTGCGGGGTaGGTAGCGGAGCAGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFELLTAG*VAEQKV Trigger: AACTTTCTGCTCCGCTACCAACCCCGCAGTGAGGAG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTACTGGCGCCAGTGTGTaGAAGTCTGAAGCCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFTGASV*KSEAQL Trigger: TAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGCAGTAAGCTGGAGATaGGGGACCAGCATGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFAVSWR*GTSMRV Trigger: CACTCTCATGCTGGTCCCCAATCTCCAGCTTACTGC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS TCA 90 bp | AGTGTGTTGAAGTCTGAAGCCCAGCTATTTACTGGTCGTTCCGGCTaGTCCTCCAAAAGTCCAAGAGAAGGGTCAGACTTAGGACTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLKSEAQLFTGRSG*SSKSPREGSDLGLH Trigger: GTGTAGTCCTAAGTCTGACCCTTCTCTTGGACTTTTGGAGGATCAGCCGGAACGACCAGTAAATAGCTGGGCTTCAGACTTCAACACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACCTCGAACCATTGGGTaGGGGTCTGAGCAGTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPPRTIG*GSEQSL Trigger: CAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAACTGGCGCCAGTGTGTaGAAGTCTGAAGCCCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPTGASV*KSEAQL Trigger: TAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGTGGCAAAGGATGCATaGTGGGGAAGCTCAAGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPVAKDA*WGSSRR Trigger: TCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCAC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGCAGTAAGCTGGAGATaGGGGACCAGCATGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPAVSWR*GTSMRV Trigger: CACTCTCATGCTGGTCCCCAATCTCCAGCTTACTGC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTCCCCAGCTCTGCTCATaGCGATGGTCTGAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFPQLCS*RWSECS Trigger: TGAACATTCAGACCATCGCAATGAGCAGAGCTGGGG...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CCA 90 bp | CTGACATATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTGCTaGATATATTCCTGCACACCAGGCATCCTGAGGCTACACATACTC | + |
|
Preference number: 5 (lower is better) Translates to: LTYEALSRRPLTTGC*IYSCTPGILRLHIL Trigger: GAGTATGTGTAGCCTCAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATATGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CCA 90 bp | ATTTCCTCTAGAGACCTCAGACAGTTCACAACCACAATTGGATCCTaGTCACGCAGAAGACTGTACAACTCATTGACGAGAGCACCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSRDLRQFTTTIGS*SRRRLYNSLTRAPS Trigger: GGATGGTGCTCTCGTCAATGAGTTGTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTGTCTGAGGTCTCTAGAGGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
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| CDS CCA 90 bp | ACTCTGAGGCTAAGCCACGTCTTCTCAAAATACTCAGCAGTAAGCTaGAGATTGGGGACCAGCATGAGAGTGTCAGAATCAGGTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TLRLSHVFSKYSAVS*RLGTSMRVSESGSC Trigger: ACAAGAACCTGATTCTGACACTCTCATGCTGGTCCCCAATCTCCAGCTTACTGCTGAGTATTTTGAGAAGACGTGGCTTAGCCTCAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACCCCAGCTCTGCTCATaGCGATGGTCTGAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPPQLCS*RWSECS Trigger: TGAACATTCAGACCATCGCAATGAGCAGAGCTGGGG...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACCCCAGCTCTGCTCATaGCGATGGTCTGAATGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEPQLCS*RWSECS Trigger: TGAACATTCAGACCATCGCAATGAGCAGAGCTGGGG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS GCA 90 bp | CTTCTGACATATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTaGTGGATATATTCCTGCACACCAGGCATCCTGAGGCTACACATA | + |
|
Preference number: 5 (lower is better) Translates to: LLTYEALSRRPLTTG*WIYSCTPGILRLHI Trigger: TATGTGTAGCCTCAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATATGTCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS GCA 90 bp | CTTCTGACATATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTaGTGGATATATTCCTGCACACCAGGCATCCTAATAACTCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTYEALSRRPLTTG*WIYSCTPGILITRW Trigger: CCAGCGAGTTATTAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATATGTCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106824.8 |
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| CDS CCA 90 bp | CTGACATATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTGCTaGATATATTCCTGCACACCAGGCATCCTAATAACTCGCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LTYEALSRRPLTTGC*IYSCTPGILITRWM Trigger: CATCCAGCGAGTTATTAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATATGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106824.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGTCTCTGACTTCACGTaGTCTACAAAGTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFVSDFT*STKSSN Trigger: GTTGGAGGACTTTGTAGACAACGTGAAGTCAGAGAC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGCAGGGATTCAGTCCTaGCCTTACTTTGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEAGIQS*PYFASQ Trigger: CTGTGAAGCAAAGTAAGGCAAGGACTGAATCCCTGC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGCAGGGATTCAGTCCTaGCCTTACTTTGCTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPAGIQS*PYFASQ Trigger: CTGTGAAGCAAAGTAAGGCAAGGACTGAATCCCTGC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGTCTCTGACTTCACGTaGTCTACAAAGTCCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEVSDFT*STKSSN Trigger: GTTGGAGGACTTTGTAGACAACGTGAAGTCAGAGAC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGTCAGAATCAGGTTCTaGTGCACCTTCTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFVRIRF*CTFFVL Trigger: GAGAACAAAGAAGGTGCACAAGAACCTGATTCTGAC...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS GCA 90 bp | TCTCCAACTGTTCCAATCACAGTTTCCAGGACAGAAACAAAACCATaGAGGGATTCAGTCCTTGCCTTACTTTGCTTCACAGAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPTVPITVSRTETKP*RDSVLALLCFTEIC Trigger: GCAAATCTCTGTGAAGCAAAGTAAGGCAAGGACTGAATCCCTGCATGGTTTTGTTTCTGTCCTGGAAACTGTGATTGGAACAGTTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAGTAGTGATATGTTCTaGTCGAAGTCCCAGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSSDMF*SKSQQL Trigger: GAGTTGCTGGGACTTCGACAAGAACATATCACTACT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAATCTTGTGCACCTTCTTaGTTCTCCTCGGAAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFESCAPS*FSSEIK Trigger: CTTGATTTCCGAGGAGAACAAAGAAGGTGCACAAGA...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAAGTCAGAATCAGGTTCTaGTGCACCTTCTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEVRIRF*CTFFVL Trigger: GAGAACAAAGAAGGTGCACAAGAACCTGATTCTGAC...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAGTCAGAATCAGGTTCTaGTGCACCTTCTTTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPVRIRF*CTFFVL Trigger: GAGAACAAAGAAGGTGCACAAGAACCTGATTCTGAC...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | CGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTAGTCCTTGCCTTACTTaGCTTCACAGAGATTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RKLWVNIRAGFPDLPLSFSPCLT*LHRDLH Trigger: ATGCAAATCTCTGTGAAGCAAAGTAAGGCAAGGACT...AAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS GCA 90 bp | AAGAGATGGTGGGCAATGGGCTTATTAATGACAACACCTCCTTCCTaGTTTAAAATTTCCTCTAGAGACCTCAGACAGTTCACAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: KRWWAMGLLMTTPPS*FKISSRDLRQFTTT Trigger: TGTGGTTGTGAACTGTCTGAGGTCTCTAGAGGAAATTTTAAAGCAGGAAGGAGGTGTTGTCATTAATAAGCCCATTGCCCACCATCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAACGTAAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCAAGTCCTTGCCTTACTTaGCTTCACAGAGATTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KEQRKLWVNIRAGFPDLPSPCLT*LHRDLH Trigger: ATGCAAATCTCTGTGAAGCAAAGTAAGGCAAGGACT...TGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTTACGTTGTTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
||
| CDS-3UTR CAA 90 bp | AAACTTTGGGTAAACATAAGAGCTGGGTTCCCAGACCTCCCACTCTCTTTTGAACCCACTGGTCCAGTTTaGACATTCTATTTAAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KLWVNIRAGFPDLPLSFEPTGPV*TFYLRD Trigger: ATCTCTTAAATAGAATGTCAAAACTGGACCAGTGGG...TTCAAAAGAGAGTGGGAGGTCTGGGAACCCAGCTCTTATGTTTACCCAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 72 bp | CGGCTCTCTGAAGAGCAGGCGGCCAGCAAGGGCCCCTaGACTCGCACAAGCACATCAGTCTGCACGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLSEEQAASKGP*TRTSTSVCTWG Trigger: CCCCCACGTGCAGACTGATGTGCTTGTGCGAGTCAAGGGGCCCTTGCTGGCCGCCTGCTCTTCAGAGAGCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS TCA 72 bp | ATGGCAGAGAGCAGCAAAACAGAGCTCACGGCTCTCTaGAGAGCAGGCGGCCAGCAAGGGCCCCTTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: MAESSKTELTAL*RAGGQQGPLDS Trigger: CGAGTCAAGGGGCCCTTGCTGGCCGCCTGCTCTTCAGAGAGCCGTGAGCTCTGTTTTGCTGCTCTCTGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | GCGATGCCGCTCTACCTGCTGGCATTTAGAGATAGTTaGCCAGTGGGCTCTGCCATACACTGGCGCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AMPLYLLAFRDS*PVGSAIHWRQC Trigger: ACACTGGCGCCAGTGTATGGCAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | AGTCTGCACGACCACTATGGCGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTCAGTGCAGTAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SLHDHYGEDGSL*KVSSHVSAVAT Trigger: CGTGGCTACTGCACTGACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTCGCCATAGTGGTCGTGCAGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106823.8 |
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| CDS TCA 72 bp | CCCAGTGGGCTCTGCCATACACTGGCGCCAGTGTGTTaGAGTCTGAAGCCCAGCTATTTACTGGTCGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSGLCHTLAPVC*SLKPSYLLVVP Trigger: CGGAACGACCAGTAAATAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGTGTATGGCAGAGCCCACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | CTTGGCAATGCTACCTATGGCGAAGATGGCAGCCTGTaGAAAGTCAGCAGCCACGTCAGTGCAGTAGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: LGNATYGEDGSL*KVSSHVSAVAT Trigger: CGTGGCTACTGCACTGACGTGGCTGCTGACTTTGCACAGGCTGCCATCTTCGCCATAGGTAGCATTGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106824.8 ENSMUST00000199686.2 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | GCATTGTGGGGAAGCTCAAGGCGATGCCGCTCTACCTaGTGGCATTTAGAGATAGTTGCCCAGTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALWGSSRRCRST*WHLEIVAQWAL Trigger: CAGAGCCCACTGGGCAACTATCTCTAAATGCCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CAA 72 bp | GCCCAGTGGGCTCTGCCATACACTGGCGCCAGTGTGTaGAAGTCTGAAGCCCAGCTATTTACTGGTCGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AQWALPYTGASV*KSEAQLFTGRS Trigger: GGAACGACCAGTAAATAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGTGTATGGCAGAGCCCACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS TCA 72 bp | GGCTCTGCCATACACTGGCGCCAGTGTGTTGAAGTCTaGAGCCCAGCTATTTACTGGTCGTTCCGGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: GSAIHWRQCVEV*SPAIYWSFRLI Trigger: GATCAGCCGGAACGACCAGTAAATAGCTGGGCTTCAGACTTCAACACACTGGCGCCAGTGTATGGCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CCA 72 bp | GAAATCAAGTGCCCTGATGTGGCAAAGGATGCATTGTaGGGAAGCTCAAGGCGATGCCGCTCTACCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EIKCPDVAKDAL*GSSRRCRSTCW Trigger: CCAGCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCACATCAGGGCACTTGATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CAA 72 bp | TCGGAAATCAAGTGCCCTGATGTGGCAAAGGATGCATaGTGGGGAAGCTCAAGGCGATGCCGCTCTACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SEIKCPDVAKDA*WGSSRRCRSTC Trigger: GCAGGTAGAGCGGCATCGCCTTGAGCTTCCCCACAATGCATCCTTTGCCACATCAGGGCACTTGATTTCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS TCA 72 bp | CAGGCTGCTGGATATATTCCTGCACACCAGGCATCCTaGGGCTACACATACTCCGTAGTGCCAGTCCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: QAAGYIPAHQAS*GYTYSVVPVLE Trigger: TTCGAGGACTGGCACTACGGAGTATGTGTAGCCTCAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS GCA 72 bp | ATCATCCTGAGCACTGAGGTAGGCTTTCCAGGGCTGTaGCCCAGCTCTGCTCATTGCGATGGTCTGAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: IILSTEVGFPGL*PSSAHCDGLNV Trigger: AACATTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGCCCTGGAAAGCCTACCTCAGTGCTCAGGATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CAA 72 bp | GGCTACACATACTCCGTAGTGCCAGTCCTCGAACCATaGGGTTGGGGTCTGAGCAGTCTTTGCAGAGCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GYTYSVVPVLEP*GWGLSSLCRAY Trigger: ATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGGCACTACGGAGTATGTGTAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 90 bp | CTGAGGCTACACATACTCCGTAGTGCCAGTCCTCGAACCATTGGGTaGGGGTCTGAGCAGTCTTTGCAGAGCGTATTGATGGCCAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LRLHILRSASPRTIG*GSEQSLQSVLMAKS Trigger: ACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGGCACTACGGAGTATGTGTAGCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 72 bp | CACATACTCCGTAGTGCCAGTCCTCGAACCATTGGGTaGGGGTCTGAGCAGTCTTTGCAGAGCGTATTGATG | + |
|
Preference number: 6 (lower is better) Translates to: HILRSASPRTIG*GSEQSLQSVLM Trigger: CATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGGCACTACGGAGTATGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 90 bp | GTCCAACAAATTGAGAATATCAAACAGTTCCTCCTCACTGCGGGGTaGGTAGCGGAGCAGAAAGTTCAGTACTTCAGCCTGGCCCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VQQIENIKQFLLTAG*VAEQKVQYFSLAPL Trigger: CAGTGGGGCCAGGCTGAAGTACTGAACTTTCTGCTCCGCTACCAACCCCGCAGTGAGGAGGAACTGTTTGATATTCTCAATTTGTTGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | GGGGACCAGCATGAGAGTGTCAGAATCAGGTTCTTGTaGACCTTCTTTGTTCTCCTCGGAAATCAAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GDQHESVRIRFL*TFFVLLGNQVP Trigger: GGGCACTTGATTTCCGAGGAGAACAAAGAAGGTGCACAAGAACCTGATTCTGACACTCTCATGCTGGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CAA 72 bp | AGTCCTCGAACCATTGGGTTGGGGTCTGAGCAGTCTTaGCAGAGCGTATTGATGGCCAAGAGTGCTAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SPRTIGLGSEQS*QSVLMAKSARS Trigger: AGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 90 bp | CCTCGAACCATTGGGTTGGGGTCTGAGCAGTCTTTGCAGAGCGTATaGATGGCCAAGAGTGCTAGATCTGGTTTTAAAGGTGCGTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PRTIGLGSEQSLQSV*MAKSARSGFKGAYV Trigger: CACATACGCACCTTTAAAACCAGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 90 bp | CGTAGTGCCAGTCCTCGAACCATTGGGTTGGGGTCTGAGCAGTCTTaGCAGAGCGTATTGATGGCCAAGAGTGCTAGATCTGGTTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSASPRTIGLGSEQS*QSVLMAKSARSGFK Trigger: TTTAAAACCAGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAATGGTTCGAGGACTGGCACTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS TCA 72 bp | TTGGATCCTGGTCACGCAGAAGACTGTACAACTCATTaGCGAGAGCACCATCCACTTCAGAGTCTCCGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LDPGHAEDCTTH*REHHPLQSLRE Trigger: TTCACGGAGACTCTGAAGTGGATGGTGCTCTCGTCAATGAGTTGTACAGTCTTCTGCGTGACCAGGATCCAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
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| CDS TCA 72 bp | CAGGGCTGTGCCCCAGCTCTGCTCATTGCGATGGTCTaGATGTTCACTACTTTTAGAGCCATTTGTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: QGCAPALLIAMV*MFTTFRAICRV Trigger: CACTCTACAAATGGCTCTAAAAGTAGTGAACATTCAGACCATCGCAATGAGCAGAGCTGGGGCACAGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CCA 72 bp | GAAGCTTTATCACGCAGACCGTTAACAACAGGCTGCTaGATATATTCCTGCACACCAGGCATCCTGAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: EALSRRPLTTGC*IYSCTPGILRL Trigger: TAGCCTCAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS TCA 72 bp | TTGGGTTGGGGTCTGAGCAGTCTTTGCAGAGCGTATTaGTGGCCAAGAGTGCTAGATCTGGTTTTAAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LGWGLSSLCRAY*WPRVLDLVLKV Trigger: CACCTTTAAAACCAGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS TCA 72 bp | AAGTCTGAAGCCCAGCTATTTACTGGTCGTTCCGGCTaGTCCTCCAAAAGTCCAAGAGAAGGGTCAGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: KSEAQLFTGRSG*SSKSPREGSDL Trigger: TAAGTCTGACCCTTCTCTTGGACTTTTGGAGGATCAGCCGGAACGACCAGTAAATAGCTGGGCTTCAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | TATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTaGTGGATATATTCCTGCACACCAGGCATCCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YEALSRRPLTTG*WIYSCTPGILR Trigger: CCTCAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 72 bp | ATTGAGAATATCAAACAGTTCCTCCTCACTGCGGGGTaGGTAGCGGAGCAGAAAGTTCAGTACTTCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: IENIKQFLLTAG*VAEQKVQYFSL Trigger: CAGGCTGAAGTACTGAACTTTCTGCTCCGCTACCAACCCCGCAGTGAGGAGGAACTGTTTGATATTCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | CCAAGAGAAGGGTCAGACTTAGGACTACACAGGATCTaGTTAACTTTATCAATGCCAACTAACAGGAGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PREGSDLGLHRI*LTLSMPTNRRR Trigger: CCGCCTCCTGTTAGTTGGCATTGATAAAGTTAAGCAGATCCTGTGTAGTCCTAAGTCTGACCCTTCTCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CCA 72 bp | AGAGACCTCAGACAGTTCACAACCACAATTGGATCCTaGTCACGCAGAAGACTGTACAACTCATTGACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDLRQFTTTIGS*SRRRLYNSLTR Trigger: TCTCGTCAATGAGTTGTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTGTCTGAGGTCTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
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| CDS CCA 72 bp | CTAAGCCACGTCTTCTCAAAATACTCAGCAGTAAGCTaGAGATTGGGGACCAGCATGAGAGTGTCAGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSHVFSKYSAVS*RLGTSMRVSES Trigger: TGATTCTGACACTCTCATGCTGGTCCCCAATCTCCAGCTTACTGCTGAGTATTTTGAGAAGACGTGGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CAA 72 bp | ATTGGGTTGGGGTCTGAGCAGTCTTTGCAGAGCGTATaGATGGCCAAGAGTGCTAGATCTGGTTTTAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: IGLGSEQSLQSV*MAKSARSGFKG Trigger: ACCTTTAAAACCAGATCTAGCACTCTTGGCCATCAATACGCTCTGCAAAGACTGCTCAGACCCCAACCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS CAA 72 bp | ATGAGAGTGTCAGAATCAGGTTCTTGTGCACCTTCTTaGTTCTCCTCGGAAATCAAGTGCCCTGATGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MRVSESGSCAPS*FSSEIKCPDVA Trigger: TGCCACATCAGGGCACTTGATTTCCGAGGAGAACAAAGAAGGTGCACAAGAACCTGATTCTGACACTCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS GCA 72 bp | ACAAAACCATGCAGGGATTCAGTCCTTGCCTTACTTTaGTTCACAGAGATTTGCATCTCTGAGTTCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TKPCRDSVLALL*FTEICISEFSG Trigger: GCCTGAGAACTCAGAGATGCAAATCTCTGTGAAGCAAAGTAAGGCAAGGACTGAATCCCTGCATGGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 ENSMUST00000200377.5 |
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| CDS CCA 72 bp | GAAGCTTTATCACGCAGACCGTTAACAACAGGCTGCTaGATATATTCCTGCACACCAGGCATCCTAATAACT | + |
|
Preference number: 6 (lower is better) Translates to: EALSRRPLTTGC*IYSCTPGILIT Trigger: AGTTATTAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106824.8 |
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| CDS CAA 72 bp | TTTCCTCTAGAGACCTCAGACAGTTCACAACCACAATaGGATCCTGGTCACGCAGAAGACTGTACAACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPLETSDSSQPQ*DPGHAEDCTTH Trigger: ATGAGTTGTACAGTCTTCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTGTCTGAGGTCTCTAGAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
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| CDS TCA 72 bp | ACCATTTCCATGAAAACATCAGACATGTCCAAGCCCTaGGTCATGTGCCTAATAACTCGCTGGATGACATTC | + |
|
Preference number: 6 (lower is better) Translates to: TISMKTSDMSKP*VMCLITRWMTF Trigger: GAATGTCATCCAGCGAGTTATTAGGCACATGACTCAGGGCTTGGACATGTCTGATGTTTTCATGGAAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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| CDS GCA 72 bp | TATGAAGCTTTATCACGCAGACCGTTAACAACAGGCTaGTGGATATATTCCTGCACACCAGGCATCCTAATA | + |
|
Preference number: 6 (lower is better) Translates to: YEALSRRPLTTG*WIYSCTPGILI Trigger: TATTAGGATGCCTGGTGTGCAGGAATATATCCAGCAGCCTGTTGTTAACGGTCTGCGTGATAAAGCTTCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106824.8 |
||
| CDS CCA 72 bp | CACTGGTCCAGTTTTGACATTCTATTTAAGAGATGGTaGGCAATGGGCTTATTAATGACAACACCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: HWSSFDILFKRW*AMGLLMTTPPS Trigger: GGAAGGAGGTGTTGTCATTAATAAGCCCATTGCCCACCATCTCTTAAATAGAATGTCAAAACTGGACCAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 ENSMUST00000106824.8 |
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| CDS GCA 72 bp | CCAAGAGTGCTAGATCTGGTTTTAAAGGTGCGTATGTaGCCATATACAGATAAACCAACTTTTTCTGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: PRVLDLVLKVRM*PYTDKPTFSEQ Trigger: TTGTTCAGAAAAAGTTGGTTTATCTGTATATGGGCACATACGCACCTTTAAAACCAGATCTAGCACTCTTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047285.7 ENSMUST00000076599.8 ENSMUST00000106823.8 |
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