Pregenerated sensors for AP3S2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063801Ensembl transcript IDs: ENSMUST00000075657.8, ENSMUST00000206725.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCCCTGGCCCTGAGGGCAGCTGTGTGGGGGAGGCGAAGGAGCAGTaGCTTAGTGCCCTGATGTCTATCACAGCCGTGAGTCAGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: VPGPEGSCVGEAKEQ*LSALMSITAVSQEQ Trigger: CTGCTCCTGACTCACGGCTGTGATAGACATCAGGGCACTAAGCCACTGCTCCTTCGCCTCCCCCACACAGCTGCCCTCAGGGCCAGGGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | TGGCCAGGAAGTGTGCACCCAACTCCATTCCCACTCTGGGAAAGGTaGAGGGCCCCAAGGTGCGACTCTAAAGGCTCAACGGGGTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: WPGSVHPTPFPLWER*RAPRCDSKGSTGFC Trigger: GCAGAACCCCGTTGAGCCTTTAGAGTCGCACCTTGGGGCCCTGCACCTTTCCCAGAGTGGGAATGGAGTTGGGTGCACACTTCCTGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | CACTGCAGGACTCAAGCTGGGAAGCACACAGCACTACAGCTAGCATaGTGCAGGCTCAGCCCATATAGCACCCAGCCCAGGCTCCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: HCRTQAGKHTALQLA*CRLSPYSTQPRLPA Trigger: AGCTGGGAGCCTGGGCTGGGTGCTATATGGGCTGAGCCTGCAGCATGCTAGCTGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | GGGTGGGGCCAGAGAGGTGGCTCCAGTTCAGAGCACTGCTGCTCTTaGAGAGGACCTGAGTCTGCTTCCCAGCACCACAATTTTAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GWGQRGGSSSEHCCS*RGPESASQHHNFRG Trigger: CCCCCTAAAATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTGGCCCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | GTGACCTTGAGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTaGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCA | + |
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Preference number: 1 (lower is better) Translates to: VTLRFGPSLAAPTKS*LTLGGQHTWKSGHP Trigger: TGGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCTCAAGGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | CTTCCAGGCAGGATTAGAGCTGTGGCTCTGGGGTCCCTTCCTGTCTaGCCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LPGRIRAVALGSLPV*PVCFLFCSPRTSGC Trigger: GCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAAGGGACCCCAGAGCCACAGCTCTAATCCTGCCTGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | GAAGCTGGGGATGTGGGACAGGAGGAGGAGCAGATGACCCGTCCATaGGGTGAGCGAGCAGTGTCTCTCCAGCTCTGCTCATACCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: EAGDVGQEEEQMTRP*GERAVSLQLCSYPH Trigger: ATGAGGGTATGAGCAGAGCTGGAGAGACACTGCTCGCTCACCTCATGGACGGGTCATCTGCTCCTCCTCCTGTCCCACATCCCCAGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | TCTATCACAGCCGTGAGTCAGGAGCAGCAGGATGGCCAGGAAGTGTaGACCCAACTCCATTCCCACTCTGGGAAAGGTGCAGGGCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: SITAVSQEQQDGQEV*TQLHSHSGKGAGPQ Trigger: TTGGGGCCCTGCACCTTTCCCAGAGTGGGAATGGAGTTGGGTGCACACTTCCTGGCCATCCTGCTGCTCCTGACTCACGGCTGTGATAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | CCTAGCAGAGGTGGTGTACACCCTGCCCTCACCTGCCACTTACCATaGCTGACAGCTCAAAGGCTAGTCTTTCCCCCTGGTCTTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: PSRGGVHPALTCHLP*LTAQRLVFPPGLSP Trigger: GGGGGAAAGACCAGGGGGAAAGACTAGCCTTTGAGCTGTCAGGCATGGTAAGTGGCAGGTGAGGGCAGGGTGTACACCACCTCTGCTAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | TGCAGGACTCAAGCTGGGAAGCACACAGCACTACAGCTAGCATGCTaGAGGCTCAGCCCATATAGCACCCAGCCCAGGCTCCCAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: CRTQAGKHTALQLAC*RLSPYSTQPRLPAL Trigger: TAGAGCTGGGAGCCTGGGCTGGGTGCTATATGGGCTGAGCCTGCAGCATGCTAGCTGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | CAGCACACTTGGAAGAGTGGGCATCCAGGATGTGTGCAGAGCAGGTaGGGCTCAGTACTCCTCTTGGTCACTGTGAAGGAGGGCAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QHTWKSGHPGCVQSR*GSVLLLVTVKEGRD Trigger: GTCCCTGCCCTCCTTCACAGTGACCAAGAGGAGTACTGAGCCCCACCTGCTCTGCACACATCCTGGATGCCCACTCTTCCAAGTGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | GTCCATGGGTGGGGCCAGAGAGGTGGCTCCAGTTCAGAGCACTGCTaGTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCACCACAATTTT | + |
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Preference number: 1 (lower is better) Translates to: VHGWGQRGGSSSEHC*SCRGPESASQHHNF Trigger: AAAATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTGGCCCCACCCATGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | AATGTCCATGGGTGGGGCCAGAGAGGTGGCTCCAGTTCAGAGCACTaGTGCTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCACCACAAT | + |
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Preference number: 1 (lower is better) Translates to: NVHGWGQRGGSSSEH*CSCRGPESASQHHN Trigger: ATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTGGCCCCACCCATGGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTaGGCATCCAGGATGTGTGCAGAGCAGGTGGGGCTCAGTACTCCT | + |
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Preference number: 1 (lower is better) Translates to: HKELAHSGWSAHLEE*ASRMCAEQVGLSTP Trigger: AGGAGTACTGAGCCCCACCTGCTCTGCACACATCCTGGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | TGGGGATGTGGGACAGGAGGAGGAGCAGATGACCCGTCCATGAGGTaGGCGAGCAGTGTCTCTCCAGCTCTGCTCATACCCTCATATACA | + |
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Preference number: 1 (lower is better) Translates to: WGCGTGGGADDPSMR*ASSVSPALLIPSYT Trigger: TGTATATGAGGGTATGAGCAGAGCTGGAGAGACACTGCTCGCTCACCTCATGGACGGGTCATCTGCTCCTCCTCCTGTCCCACATCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | GGTGCCATGGTCAGGCTTGGGAAAGGTAATTTGTCCAGCACTGTATaGAGTAGGCATGACACTGGCAAGTCAGGGGTGGGGACTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: GAMVRLGKGNLSSTV*SRHDTGKSGVGTVL Trigger: AAGGACAGTCCCCACCCCTGACTTGCCAGTGTCATGCCTACTGCATACAGTGCTGGACAAATTACCTTTCCCAAGCCTGACCATGGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | CAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAATCCTTaGTGTCCTCCACCTGCACCCATGGGCCTCCCTACTCCCATGTCA | + |
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Preference number: 1 (lower is better) Translates to: QANMPIISSFSRYNP*CPPPAPMGLPTPMS Trigger: TGACATGGGAGTAGGGAGGCCCATGGGTGCAGGTGGAGGACAGCAAGGATTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | TTTACTCTCATCCCTTGGCCATGTCACTTACTCCAACTCCATACGTaGCAGAGCTGGACCCACGCTCTCCTGTCCACTCACTCACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: FTLIPWPCHLLQLHT*QSWTHALLSTHSPA Trigger: TGCTGGTGAGTGAGTGGACAGGAGAGCGTGGGTCCAGCTCTGTCACGTATGGAGTTGGAGTAAGTGACATGGCCAAGGGATGAGAGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | TTCCAGAGCTGTAGAATGTCAACCAAGGGAGCCCAGTGTGTTCACTaGAGGACTCAAGCTGGGAAGCACACAGCACTACAGCTAGCATGC | + |
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Preference number: 1 (lower is better) Translates to: FQSCRMSTKGAQCVH*RTQAGKHTALQLAC Trigger: GCATGCTAGCTGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAGTGAACACACTGGGCTCCCTTGGTTGACATTCTACAGCTCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | TGTCCAGCACTGTATGCAGTAGGCATGACACTGGCAAGTCAGGGGTaGGGACTGTCCTTTAAATCTTCCACACTGCAGTCAGAGTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: CPALYAVGMTLASQG*GLSFKSSTLQSESG Trigger: GCCAGACTCTGACTGCAGTGTGGAAGATTTAAAGGACAGTCCCCACCCCTGACTTGCCAGTGTCATGCCTACTGCATACAGTGCTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | CATACCCTCATATACAGCTTCCAGGCAGGATTAGAGCTGTGGCTCTaGGGTCCCTTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: HTLIYSFQAGLELWL*GPFLSDQCVSCSAL Trigger: GAGAGCAGAACAGGAAACACACTGGTCAGACAGGAAGGGACCCCAGAGCCACAGCTCTAATCCTGCCTGGAAGCTGTATATGAGGGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | TCTGCTCATACCCTCATATACAGCTTCCAGGCAGGATTAGAGCTGTaGCTCTGGGGTCCCTTCCTGTCTGACCAGTGTGTTTCCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: SAHTLIYSFQAGLEL*LWGPFLSDQCVSCS Trigger: AGAACAGGAAACACACTGGTCAGACAGGAAGGGACCCCAGAGCCACAGCTCTAATCCTGCCTGGAAGCTGTATATGAGGGTATGAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | AGGGCTAGGAGACTCGCTACCCTCAGTGTAGCATGTATGGTGCCATaGTCAGGCTTGGGAAAGGTAATTTGTCCAGCACTGTATGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: RARRLATLSVACMVP*SGLGKVICPALYAV Trigger: TACTGCATACAGTGCTGGACAAATTACCTTTCCCAAGCCTGACCATGGCACCATACATGCTACACTGAGGGTAGCGAGTCTCCTAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CCA 90 bp | GTACCCCCATTCAACTCCAGCTCCAAGAGATCCAAGGCCTTCGTCTaGTCTCTGAGGGTACTTCTCCACCTCCATGTAAAAATACTGACC | + |
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Preference number: 1 (lower is better) Translates to: VPPFNSSSKRSKAFV*SLRVLLHLHVKILT Trigger: GGTCAGTATTTTTACATGGAGGTGGAGAAGTACCCTCAGAGACCAGACGAAGGCCTTGGATCTCTTGGAGCTGGAGTTGAATGGGGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | GAAGATAAAGGACGCTTGTTTCTTCTTCAAACTGCAAACACTTGCTaGCAGGAGGGCAGTGCTCAGTGGCTGGGAATAGGCTATCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: EDKGRLFLLQTANTC*QEGSAQWLGIGYPL Trigger: CAGAGGATAGCCTATTCCCAGCCACTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGTTTGAAGAAGAAACAAGCGTCCTTTATCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | AGTGAAGATAAAGGACGCTTGTTTCTTCTTCAAACTGCAAACACTTaGTGCCAGGAGGGCAGTGCTCAGTGGCTGGGAATAGGCTATCCT | + |
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Preference number: 1 (lower is better) Translates to: SEDKGRLFLLQTANT*CQEGSAQWLGIGYP Trigger: AGGATAGCCTATTCCCAGCCACTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGTTTGAAGAAGAAACAAGCGTCCTTTATCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR GCA 90 bp | CTTGTTTCTTCTTCAAACTGCAAACACTTGCTGCCAGGAGGGCAGTaGTCAGTGGCTGGGAATAGGCTATCCTCTGCTAAACTGGTTTTT | + |
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Preference number: 1 (lower is better) Translates to: LVSSSNCKHLLPGGQ*SVAGNRLSSAKLVF Trigger: AAAAACCAGTTTAGCAGAGGATAGCCTATTCCCAGCCACTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGTTTGAAGAAGAAACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | CACAGCAAAGTGCACAGGGCACTTGTAATCTCAGCATTTTGGAGGTaGTGCAGGAGGATTGAGAATTTAGGTTACAAAGTGAGATCTTGT | + |
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Preference number: 1 (lower is better) Translates to: HSKVHRALVISAFWR*CRRIENLGYKVRSC Trigger: ACAAGATCTCACTTTGTAACCTAAATTCTCAATCCTCCTGCATCACCTCCAAAATGCTGAGATTACAAGTGCCCTGTGCACTTTGCTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR TCA 90 bp | CAGGGCACTTGTAATCTCAGCATTTTGGAGGTGATGCAGGAGGATTaGGAATTTAGGTTACAAAGTGAGATCTTGTCTCAAAGCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: QGTCNLSILEVMQED*EFRLQSEILSQSTK Trigger: CTTTGTGCTTTGAGACAAGATCTCACTTTGTAACCTAAATTCTCAATCCTCCTGCATCACCTCCAAAATGCTGAGATTACAAGTGCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGGAGAGGGGCCTGCGTaGGGCGGTTCCCCATGGCGG | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAGEGPA*GGSPWR Trigger: CCGCCATGGGGAACCGCCCCACGCAGGCCCCTCTCC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 90 bp | GGCAGCCCCCACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTaGGAAGAGTGGGCATCCAGGATGTGTGCAGAGCAGGTGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GSPHKELAHSGWSAH*EEWASRMCAEQVGL Trigger: GAGCCCCACCTGCTCTGCACACATCCTGGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCCACAGTCCCTGGCCCTaGGGGCAGCTGTGTGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QPWPLVASLMSQEQKEHPHSPWP*GQLCGG Trigger: TCCCCCACACAGCTGCCCTCAGGGCCAGGGACTGTG...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTGGCTCACTCTGGGTGGTTCCATGGTGCCAGGCTaGCAGTCAGTGCCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: RFGPSLAAPTKSWLTLGGSMVPG*QSVPMF Trigger: GAACATGGGCACTGACTGGCAGCCTGGCACCATGGA...ACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTCCAGTGGTGGGGCCCTaGGAAGCAGGTGGCGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAPVVGP*EAGGAF Trigger: GAACGCGCCACCTGCTTCCCAGGGCCCCACCACTGG...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCTGTGTTCAGTCCCAGTaGTGGGGCCCTGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HKELAHSGWSAHLEEWASCVQSQ*WGPGKQ Trigger: CTGCTTCCCAGGGCCCCACCACTGGGACTGAACACA...GGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCCCAGTGTGTTCACTGCAGGACTCAAGCTGGGAAGCACACAGCACTACAACTCCATTCCCACTCTaGGAAAGGTGCAGGGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSPVCSLQDSSWEAHSTTTPFPL*ERCRAP Trigger: TGGGGCCCTGCACCTTTCCCAGAGTGGGAATGGAGT...TGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAGTGAACACACTGGGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTTGCAGGAAGCCCTGCTaGGGACTGAGACACACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVACRKPC*GLRHTG Trigger: CCCAGTGTGTCTCAGTCCCCAGCAGGGCTTCCTGCA...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGCCCCCACAAAGAGCTaGCTCACTCTGGGTGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAAPTKS*LTLGGQ Trigger: CTGACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 90 bp | TCTCCCCGGACGTCAGGTTGCTCCAATGTGCACACTCCTCAGCCCTaGCCCAGGCTGTCCTTTACTCTCATCCCTTGGCCATGTCACTTA | + |
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Preference number: 2 (lower is better) Translates to: SPRTSGCSNVHTPQP*PRLSFTLIPWPCHL Trigger: TAAGTGACATGGCCAAGGGATGAGAGTAAAGGACAGCCTGGGCAAGGGCTGAGGAGTGTGCACATTGGAGCAACCTGACGTCCGGGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCGATGGCCAGGAAGTGTaGACCCAACTCCATTCCCAC | + |
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Preference number: 2 (lower is better) Translates to: HKELAHSGWSAHLEEWASDGQEV*TQLHSH Trigger: GTGGGAATGGAGTTGGGTGCACACTTCCTGGCCATC...GGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTCACCCTGCCCTCACCTaGCACTTACCATGCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAHPALT*HLPCLT Trigger: TGTCAGGCATGGTAAGTGGCAGGTGAGGGCAGGGTG...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGAGCACTGCTGCTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCACCACAATGACATTGGTCTCCTCTaGGAGAGGGTTCTGGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SEHCCSCRGPESASQHHNDIGLL*ERVLGV Trigger: GACCCCCAGAACCCTCTCGCAGAGGAGACCAATGTC...ATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCGGCAGGGACCTGCTCTaGAGCTTCATTTCCAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: HKELAHSGWSAHLEEWASGRDLL*SFISRY Trigger: GTACCTGGAAATGAAGCTCCAGAGCAGGTCCCTGCC...GGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 90 bp | GCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAATCCTaGCTGTCCTCCACCTGCACCCATGGGCCTCCCTACTCCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: ASEHAHHLILFSVQS*LSSTCTHGPPYSHV Trigger: GACATGGGAGTAGGGAGGCCCATGGGTGCAGGTGGAGGACAGCAAGGATTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 90 bp | GCACACTCCTCAGCCCTTGCCCAGGCTGTCCTTTACTCTCATCCCTaGGCCATGTCACTTACTCCAACTCCATACGTGACAGAGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: AHSSALAQAVLYSHP*AMSLTPTPYVTELD Trigger: GTCCAGCTCTGTCACGTATGGAGTTGGAGTAAGTGACATGGCCAAGGGATGAGAGTAAAGGACAGCCTGGGCAAGGGCTGAGGAGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTTGTCTATCACAGCCGTaGGTCAGGAGCAGCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVACLSQP*VRSSRM Trigger: CATCCTGCTGCTCCTGACTCACGGCTGTGATAGACA...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTGATGTCTCAAGAGCAAAAGGAACACCCCTCTCCAGAAGGACCAAGGACTCCACTCTGGGAAAGGTaGAGGGCCCCAAGGTGCGAC | + |
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Preference number: 2 (lower is better) Translates to: SLMSQEQKEHPSPEGPRTPLWER*RAPRCD Trigger: GTCGCACCTTGGGGCCCTGCACCTTTCCCAGAGTGG...AGTCCTTGGTCCTTCTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCACCTGGGAAGCCAAGTaGTTCCAACTCAATGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HKELAHSGWSAHLEEWASTWEAK*FQLNGA Trigger: GGCACCATTGAGTTGGAAGCACTTGGCTTCCCAGGT...GGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTACTGCAAACACTTGCTaGCAGGAGGGCAGTGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVATANTC*QEGSAQ Trigger: CTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGT...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGCCCAGTGTGTTCACTGCAGGACTCAAGCTGGGAAGCACACAGCACTACACTTTCCCCCAGTAAGTaGTACAGGATCTCAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GSPVCSLQDSSWEAHSTTLSPSK*YRISEA Trigger: GGCTTCTGAGATCCTGTATCACTTACTGGGGGAAAG...TGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAGTGAACACACTGGGCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGAATGCAGTAGGATTGATCTCAGGTCTGTCCTCTAGCCAAGTGCCCACCCTGCTCTGCAGCAACTaGGGACCACAATGCTTGACC | + |
|
Preference number: 2 (lower is better) Translates to: PENAVGLISGLSSSQVPTLLCSN*GPQCLT Trigger: GGTCAAGCATTGTGGTCCGCAGTTGCTGCAGAGCAG...GGTGGGCACTTGGCTAGAGGACAGACCTGAGATCAATCCTACTGCATTCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCGCACTACAGCTAGCATaGTGCAGGCTCAGCCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: QPWPLVASLMSQEQKEHPALQLA*CRLSPY Trigger: ATATGGGCTGAGCCTGCAGCATGCTAGCTGTAGTGC...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTACCCTGGCCTCTGGTTaGGTCACTGATGTCTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVATLASG*VTDVSR Trigger: TCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGT...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGCCCAGTGTGTTCACTGCAGGACTCAAGCTGGGAAGCACACAGCACTACACTGGTTAGTGGATTCTaGGCAAGTGTGTGTATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSPVCSLQDSSWEAHSTTLVSGF*ASVCMW Trigger: CCACATACACACACTTGCTCAGAATCCACTAACCAG...TGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAGTGAACACACTGGGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGATTGCTCAATCCCCTaGAGTCTCAGTTTCCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVADCSIP*SLSFPV Trigger: GACAGGGAAACTGAGACTTCAGGGGATTGAGCAATC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGTGCAAGCCGTTGTGTaGTGCTTGCTTTTGCAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAVQAVV*CLLLQS Trigger: AGACTGCAAAAGCAAGCATCACACAACGGCTTGCAC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGTGCTTCCAACTCAATaGTGCCTTAGGCCAACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAVLPTQ*CLRPTA Trigger: TGCTGTTGGCCTAAGGCACCATTGAGTTGGAAGCAC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTGGCTCACTCTGGGTGGTCTTTTCGCTTATAGCTaGTCTTTGCTACTTTTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: RFGPSLAAPTKSWLTLGGLFAYS*SLLLLW Trigger: CCACAAAAGTAGCAAAGACCAGCTATAAGCGAAAAG...ACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGAATGCAGTAGGATTGATCTCAGGTCTGTCCTCTAGCCAAGTGCCCACCTTCACAGCACAGCACTaGACCTTCTGCTTCCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PENAVGLISGLSSSQVPTFTAQH*TFCFQE Trigger: CTCTTGGAAGCAGAAGGTTCAGTGCTGTGCTGTGAA...GGTGGGCACTTGGCTAGAGGACAGACCTGAGATCAATCCTACTGCATTCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTGGCTCACTCTGGGTGGTCACTGTAAAAGGAGATaGATGTACACAAATGGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: RFGPSLAAPTKSWLTLGGHCKRR*MYTNGN Trigger: ATTGCCATTTGTGTACATTCATCTCCTTTTACAGTG...ACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 90 bp | CAGTGTAGCATGTATGGTGCCATGGTCAGGCTTGGGAAAGGTAATTaGTCCAGCACTGTATGCAGTAGGCATGACACTGGCAAGTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QCSMYGAMVRLGKGN*SSTVCSRHDTGKSG Trigger: CCCTGACTTGCCAGTGTCATGCCTACTGCATACAGTGCTGGACAAATTACCTTTCCCAAGCCTGACCATGGCACCATACATGCTACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTGGCCTTGCTATATTGTaGGTTCTTTTCCCACCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLSDQCVSCSALPGRQVAGLAIL*VLFPPF Trigger: AAAGGGTGGGAAAAGAACTCACAATATAGCAAGGCC...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAATCAGGAGCAGCAGGATaGCCAGGAAGTGTGCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQSGAAG*PGSVHP Trigger: TGGGTGCACACTTCCTGGCCATCCTGCTGCTCCTGA...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCGCAAGTGTGTGTATGTaGGGACTTCTTCATTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: QPWPLVASLMSQEQKEHPASVCM*GLLHSQ Trigger: CTGTGAATGAAGAAGTCCCCACATACACACACTTGC...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCCAACACCATTCCACCCATCACCACCTCCTGCAGGATGTAGTGCACCTGTCTCCACAAAAACCTaGATGAGGTCCAAGATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSPTPFHPSPPPAGCSAPVSTKT*MRSKIP Trigger: TGGGATCTTGGACCTCATCCAGGTTTTTGTGGAGAC...AGGTGCACTACATCCTGCAGGAGGTGGTGATGGGTGGAATGGTGTTGGAGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAAGGCAGGCAGATCTATaGGTTCAAGGCCAGCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQRQADL*VQGQPG Trigger: ACCAGGCTGGCCTTGAACTCATAGATCTGCCTGCCT...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAAGGAGGGCAGGGACCTaGTCTGGAGCTTCATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQRRAGT*SGASFP Trigger: TGGAAATGAAGCTCCAGAGCAGGTCCCTGCCCTCCT...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCTCCAACACCATTCCACCCATCACCACCTCCTGCAGGATGTAGTGCACCTACACAAAGTAGAGGGTaGCATAGTGCCGGTAAATCA | + |
|
Preference number: 2 (lower is better) Translates to: LSPTPFHPSPPPAGCSAPTQSRG*HSAGKS Trigger: TGATTTACCGGCACTATGCCACCCTCTACTTTGTGT...AGGTGCACTACATCCTGCAGGAGGTGGTGATGGGTGGAATGGTGTTGGAGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGCACTGCTGCTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCACCACAATAACCTCCTGTTAATTTaGGGTCCAAGGAATTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: SEHCCSCRGPESASQHHNNLLLI*GPRNSI Trigger: TATGGAATTCCTTGGACCTCAAATTAACAGGAGGTT...ATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAACTGCAGGACTCAAGCTaGGAAGCACACAGCACTACA | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQLQDSS*EAHSTT Trigger: TGTAGTGCTGTGTGCTTCCCAGCTTGAGTCCTGCAG...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCCACCCATCACCACCTCCTGCAGGATGTAGTGCACCTTATCCATATGGAACGCTTGAGGACCAGATaGAAAGTCTCTCGAACAATC | + |
|
Preference number: 2 (lower is better) Translates to: HSTHHHLLQDVVHLIHMERLRTR*KVSRTI Trigger: GATTGTTCGAGAGACTTTCCATCTGGTCCTCAAGCG...TTCCATATGGATAAGGTGCACTACATCCTGCAGGAGGTGGTGATGGGTGGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTGATGTCTCAAGAGCAAAAGGAACACCCCTCTCCAGAAGGACCAAGGACTGAGAGAGAGAGAGAATaGGAATCTCAGACAATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SLMSQEQKEHPSPEGPRTERERE*ESQTMA Trigger: AGCCATTGTCTGAGATTCTCATTCTCTCTCTCTCTC...AGTCCTTGGTCCTTCTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | TCACTGATGTCTCAAGAGCAAAAGGAACACCCCTCTCCAGAAGGACCAAGGACTTATATACTAGGAAACTaGTCTGCAGCAACTGCGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLMSQEQKEHPSPEGPRTYILGN*SAATAD Trigger: GTCCGCAGTTGCTGCAGAGCAGTTTCCTAGTATATA...AGTCCTTGGTCCTTCTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAGGTGTATGTGTAGGGTaGACTCTGCATTTCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQGVCVG*TLHFWR Trigger: CCTCCAGAAATGCAGAGTCCACCCTACACATACACC...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTGATGTCTCAAGAGCAAAAGGAACACCCCTCTCCAGAAGGACCAAGGACTTTAATCCCTCTGGCTTaGCTAGAGGAATTGAGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLMSQEQKEHPSPEGPRTLIPLA*LEELSF Trigger: AAAACTCAATTCCTCTAGTCAAGCCAGAGGGATTAA...AGTCCTTGGTCCTTCTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAATCAGCATTTTGGAGGTaGTGCAGGAGGATTGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQSAFWR*CRRIEN Trigger: ATTCTCAATCCTCCTGCATCACCTCCAAAATGCTGA...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTGCTCTGACAGAGGACTaGAAGGTGAGGACAGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFALTED*KVRTGC Trigger: GCATCCTGTCCTCACCTTTCAGTCCTCTGTCAGAGC...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAGTGATGCAGGAGGATTaGGAATTTAGGTTACAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VYPQASEHAHHLILFSVQVMQED*EFRLQS Trigger: ACTTTGTAACCTAAATTCTCAATCCTCCTGCATCAC...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTTGTCCTCTAGCCAAGTaGCCACCATCACTGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFCPLAK*PPSLQL Trigger: GAGCTGCAGTGATGGTGGGCACTTGGCTAGAGGACA...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTCAGAGGACTGAAAGGTaGGGACAGGATGCTGCATCA | + |
|
Preference number: 2 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFQRTER*GQDAAS Trigger: TGATGCAGCATCCTGTCCTCACCTTTCAGTCCTCTG...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR GCA 90 bp | AAATGCTTGATTCCAGCCACTGTAAAAGGAGATGAATGTACACAAATGGCAATAACCTGCCACTTACCATaGCTGACAGCTCAAAGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: KCLIPATVKGDECTQMAITCHLP*LTAQRL Trigger: TAGCCTTTGAGCTGTCAGGCATGGTAAGTGGCAGGT...TATTGCCATTTGTGTACATTCATCTCCTTTTACAGTGGCTGGAATCAAGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGATCAAGTCCAACTCACATACATTCTCAAAACACTTATCCAGTGTCTCCACTGTTGAATTTCTTCTaGTTGAAGAGGCAGGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GRSSPTHIHSQNTYPVSPLLNFF*LKRQGD Trigger: ATCCCCCTGCCTCTTCAACCAGAAGAAATTCAACAG...TGGAGACACTGGATAAGTGTTTTGAGAATGTATGTGAGTTGGACTTGATCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTTTCTGCTTCTGGACTTaGCTGCTTTGCTCATCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFFCFWT*LLCSSC Trigger: GCAGGATGAGCAAAGCAGTCAAGTCCAGAAGCAGAA...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATGCTTGATTCCAGCCACTGTAAAAGGAGATGAATGTACACAAATGGCAATAGATGCTTCCAGAGAATaGAGTAGGATTGATCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: KCLIPATVKGDECTQMAIDASRE*SRIDLR Trigger: CCTGAGATCAATCCTACTGCATTCTCTGGAAGCATC...TATTGCCATTTGTGTACATTCATCTCCTTTTACAGTGGCTGGAATCAAGCATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTCAGCATCACAAGCCATaGAAATACACTATCCTATCG | + |
|
Preference number: 2 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFQHHKP*KYTILS Trigger: CGATAGGATAGTGTATTTCCATGGCTTGTGATGCTG...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | GGAAGTCAGATGTGTTCAGTCCCAGTGGTGGGGCCCTaGGAAGCAGGTGGCGCGTTCACAGTCCCTGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GSQMCSVPVVGP*EAGGAFTVPGP Trigger: AGGGCCAGGGACTGTGAACGCGCCACCTGCTTCCCAGGGCCCCACCACTGGGACTGAACACATCTGACTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | GGGTGGGGCCAGAGAGGTGGCTCCAGTTCAGAGCACTaGTGCTCTTGCAGAGGACCTGAGTCTGCTTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GWGQRGGSSSEH*CSCRGPESASQ Trigger: CTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTGGCCCCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | CAGCACCGGCAGAGTGCAGGAAGCCCTGCTGGGGACTaGGACACACTGGGTAAGACACACGGTCTCCTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: QHRQSAGSPAGD*DTLGKTHGLLG Trigger: TCCTAGGAGACCGTGTGTCTTACCCAGTGTGTCTCAGTCCCCAGCAGGGCTTCCTGCACTCTGCCGGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | TGGGGCCAGAGAGGTGGCTCCAGTTCAGAGCACTGCTaGTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: WGQRGGSSSEHC*SCRGPESASQH Trigger: GTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTGGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | GGTGCTAGAGAGGAAGTCAGATGTGTTCAGTCCCAGTaGTGGGGCCCTGGGAAGCAGGTGGCGCGTTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: GAREEVRCVQSQ*WGPGKQVARSQ Trigger: CTGTGAACGCGCCACCTGCTTCCCAGGGCCCCACCACTGGGACTGAACACATCTGACTTCCTCTCTAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | CTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTaGGCATCCAGGATGTGTGCAGAGCAGGTGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LAHSGWSAHLEE*ASRMCAEQVGL Trigger: GAGCCCCACCTGCTCTGCACACATCCTGGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CCATTCCCACTCTGGGAAAGGTGCAGGGCCCCAAGGTaGGACTCTAAAGGCTCAACGGGGTTCTGCTTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PFPLWERCRAPR*DSKGSTGFCFW Trigger: CCAGAAGCAGAACCCCGTTGAGCCTTTAGAGTCGCACCTTGGGGCCCTGCACCTTTCCCAGAGTGGGAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CAAGCTGGGAAGCACACAGCACTACAGCTAGCATGCTaGAGGCTCAGCCCATATAGCACCCAGCCCAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: QAGKHTALQLAC*RLSPYSTQPRL Trigger: GAGCCTGGGCTGGGTGCTATATGGGCTGAGCCTGCAGCATGCTAGCTGTAGTGCTGTGTGCTTCCCAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CACTGCAGTCAGAGTCTGGCCTCCATGGTGCCAGGCTaGCAGTCAGTGCCCATGTTCCAACCACGTAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HCSQSLASMVPG*QSVPMFQPRKH Trigger: GTGCTTACGTGGTTGGAACATGGGCACTGACTGGCAGCCTGGCACCATGGAGGCCAGACTCTGACTGCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | GTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTaGTCCAATGTGCACACTCCTCAGCCCTTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VCFLFCSPRTSG*SNVHTPQPLPR Trigger: CCTGGGCAAGGGCTGAGGAGTGTGCACATTGGAGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | AGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTaGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RFGPSLAAPTKS*LTLGGQHTWKS Trigger: ACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | GGTGGTGTACACCCTGCCCTCACCTGCCACTTACCATaGCTGACAGCTCAAAGGCTAGTCTTTCCCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GGVHPALTCHLP*LTAQRLVFPPG Trigger: ACCAGGGGGAAAGACTAGCCTTTGAGCTGTCAGGCATGGTAAGTGGCAGGTGAGGGCAGGGTGTACACCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | ACTCAAGCTGGGAAGCACACAGCACTACAGCTAGCATaGTGCAGGCTCAGCCCATATAGCACCCAGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TQAGKHTALQLA*CRLSPYSTQPR Trigger: CCTGGGCTGGGTGCTATATGGGCTGAGCCTGCAGCATGCTAGCTGTAGTGCTGTGTGCTTCCCAGCTTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | ATCTTCCACACTGCAGTCAGAGTCTGGCCTCCATGGTaGCAGGCTGCCAGTCAGTGCCCATGTTCCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: IFHTAVRVWPPW*QAASQCPCSNH Trigger: GTGGTTGGAACATGGGCACTGACTGGCAGCCTGGCACCATGGAGGCCAGACTCTGACTGCAGTGTGGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCGGCAGAGTGCAGGAAGCCCTGCTGGGGACTGAGACACACTGGGTAAGACACGTTCTGCTTCTGGACTaGACTGCTTTGCTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGRVQEALLGTETHWVRHVLLLD*TALLIL Trigger: CAGGATGAGCAAAGCAGTCAAGTCCAGAAGCAGAAC...GTGTCTTACCCAGTGTGTCTCAGTCCCCAGCAGGGCTTCCTGCACTCTGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | AGAGCAGGTGGGGCTCAGTACTCCTCTTGGTCACTGTaGAGGAGGGCAGGGACCTGCTCTGGAGCTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RAGGAQYSSWSL*RRAGTCSGASF Trigger: AAATGAAGCTCCAGAGCAGGTCCCTGCCCTCCTTCACAGTGACCAAGAGGAGTACTGAGCCCCACCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | ATCCAGTCGCCACAGTCTACAGACATTGGTCTCCTCTaGGAGAGGGTTCTGGGGGTCGCACCAACTCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: IQSPQSTDIGLL*ERVLGVAPTLC Trigger: ACACAGAGTTGGTGCGACCCCCAGAACCCTCTCGCAGAGGAGACCAATGTCTGTAGACTGTGGCGACTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CAGAGAGGTGGCTCCAGTTCAGAGCACTGCTGCTCTTaGAGAGGACCTGAGTCTGCTTCCCAGCACCACAAT | + |
|
Preference number: 3 (lower is better) Translates to: QRGGSSSEHCCS*RGPESASQHHN Trigger: ATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGAACTGGAGCCACCTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | GTCAGCACACTTGGAAGAGTGGGCATCCAGGATGTGTaGAGAGCAGGTGGGGCTCAGTACTCCTCTTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSTLGRVGIQDV*RAGGAQYSSWS Trigger: TGACCAAGAGGAGTACTGAGCCCCACCTGCTCTGCACACATCCTGGATGCCCACTCTTCCAAGTGTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | CTCTTGGTCACTGTGAAGGAGGGCAGGGACCTGCTCTaGAGCTTCATTTCCAGGTACCCATGGCTGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLVTVKEGRDLL*SFISRYPWLMW Trigger: CCACATCAGCCATGGGTACCTGGAAATGAAGCTCCAGAGCAGGTCCCTGCCCTCCTTCACAGTGACCAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | TCCCCATGGCGGTGCATCAGCCTCCACACCAGCACATaGAACTTTGCAGGGTTCCAGAGCTGTAGAATGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SPWRCISLHTST*NFAGFQSCRMS Trigger: TGACATTCTACAGCTCTGGAACCCTGCAAAGTTGCATGTGCTGGTGTGGAGGCTGATGCACCGCCATGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CAGGACCCCAAGGCAAACACAACCCTGGCCTCTGGTTaGGTCACTGATGTCTCAAGAGCAAAAGGAACACCC | + |
|
Preference number: 3 (lower is better) Translates to: QDPKANTTLASG*VTDVSRAKGTP Trigger: GGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTGTGTTTGCCTTGGGGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | AGCCTTTACAGGCCAGGCCAGGCCAGGGATCGTGTCTaGGACCTAGGCAGAGGCATTGCTCCTAATTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLYRPGQARDRV*DLGRGIAPNFF Trigger: AAAGAAATTAGGAGCAATGCCTCTGCCTAGGTCCCAGACACGATCCCTGGCCTGGCCTGGCCTGTAAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTCCAGCACATGCAACTTaGCAGGGTTCCAGAGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FLSDQCVSCSALPGRQVAPAHAT*QGSRAV Trigger: TACAGCTCTGGAACCCTGCAAAGTTGCATGTGCTGG...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAGAGCTGGCTCACTCTGGGTGGTCAACCTCCTGTTAATTaGAGGTCCAAGGAATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RFGPSLAAPTKSWLTLGGQPPVN*RSKEFH Trigger: ATGGAATTCCTTGGACCTCAAATTAACAGGAGGTTG...ACCACCCAGAGTGAGCCAGCTCTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | CAAGGCAAACACAACCCTGGCCTCTGGTTGCGTCACTaGTGTCTCAAGAGCAAAAGGAACACCCCTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGKHNPGLWLRH*CLKSKRNTPLQ Trigger: CTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTGTGTTTGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | GTCAGGCTTGGGAAAGGTAATTTGTCCAGCACTGTATaGAGTAGGCATGACACTGGCAAGTCAGGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VRLGKGNLSSTV*SRHDTGKSGVG Trigger: CCCCACCCCTGACTTGCCAGTGTCATGCCTACTGCATACAGTGCTGGACAAATTACCTTTCCCAAGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | ACCCTCATATACAGCTTCCAGGCAGGATTAGAGCTGTaGCTCTGGGGTCCCTTCCTGTCTGACCAGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TLIYSFQAGLEL*LWGPFLSDQCV Trigger: AACACACTGGTCAGACAGGAAGGGACCCCAGAGCCACAGCTCTAATCCTGCCTGGAAGCTGTATATGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | AGGCTAGTCTTTCCCCCTGGTCTTTCCCCCAGTAAGTaGTACAGGATCTCAGAAGCCCTTGGTGCTAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RLVFPPGLSPSK*YRISEALGARE Trigger: CTCTCTAGCACCAAGGGCTTCTGAGATCCTGTATCACTTACTGGGGGAAAGACCAGGGGGAAAGACTAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | AGCAGACTGTCAGGGGACATGGTGCAAGCCGTTGTGTaGTGCTTGCTTTTGCAGTCTACAGTACCAGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLSGDMVQAVV*CLLLQSTVPGH Trigger: GTGTCCTGGTACTGTAGACTGCAAAAGCAAGCATCACACAACGGCTTGCACCATGTCCCCTGACAGTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | AGGTACCGTGGGACTGTAAGGATGGACTTCTTGGTGTaGGTGCTCACAGGTGTATGTGTAGGGTGGACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RYRGTVRMDFLV*VLTGVCVGWTL Trigger: CAGAGTCCACCCTACACATACACCTGTGAGCACTCACACCAAGAAGTCCATCCTTACAGTCCCACGGTACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | CCTTCTCTAGCCTCAGAGGGCATGTATACTCTCCTCTaGCCTCAGAGCATACCATCAGACAGACAGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLASEGMYTLL*PQSIPSDRQTD Trigger: GTCTGTCTGTCTGTCTGATGGTATGCTCTGAGGCCAGAGGAGAGTATACATGCCCTCTGAGGCTAGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGAGCTGGCTCACTCTGGGTGGTCAGCACACTTGGAAGAGTGGGCATCCAGGTCACAGAAAGAATaGCTAAACTGGCTCTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HKELAHSGWSAHLEEWASRSQKE*LNWLCS Trigger: ACTGCAGAGCCAGTTTAGCAATTCTTTCTGTGACCT...GGATGCCCACTCTTCCAAGTGTGCTGACCACCCAGAGTGAGCCAGCTCTTTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | TCTTCAAACTGCAAACACTTGCTGCCAGGAGGGCAGTaGTCAGTGGCTGGGAATAGGCTATCCTCTGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSNCKHLLPGGQ*SVAGNRLSSAK Trigger: TTTAGCAGAGGATAGCCTATTCCCAGCCACTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGTTTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CCA 72 bp | AGACTCGCTACCCTCAGTGTAGCATGTATGGTGCCATaGTCAGGCTTGGGAAAGGTAATTTGTCCAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RLATLSVACMVP*SGLGKVICPAL Trigger: CAGTGCTGGACAAATTACCTTTCCCAAGCCTGACCATGGCACCATACATGCTACACTGAGGGTAGCGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTATCAAAGTTCCAGAATaGTCACTACAGAGCACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FLSDQCVSCSALPGRQVAIKVPE*SLQSTV Trigger: GACAGTGCTCTGTAGTGACAATTCTGGAACTTTGAT...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAAGGCTTACTGTGACCTaGAGGTTTGGGCCTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VYPQASEHAHHLILFSVQRLTVT*RFGPSL Trigger: CAGGCTAGGCCCAAACCTCAAGGTCACAGTAAGCCT...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | AAAGGACGCTTGTTTCTTCTTCAAACTGCAAACACTTaGTGCCAGGAGGGCAGTGCTCAGTGGCTGGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: KGRLFLLQTANT*CQEGSAQWLGI Trigger: TATTCCCAGCCACTGAGCACTGCCCTCCTGGCAGCAAGTGTTTGCAGTTTGAAGAAGAAACAAGCGTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR GCA 72 bp | CTCACCAGCAGGCGTTTATCCCCAAGCAAGCGAACATaGCCATCATCTCATCCTTTTCTCGGTACAATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSRRLSPSKRT*PSSHPFLGTIL Trigger: AAGGATTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAACGCCTGCTGGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAACATGGTGCAAGCCGTaGTGTGATGCTTGCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VYPQASEHAHHLILFSVQTWCKP*CDACFC Trigger: GCAAAAGCAAGCATCACACAACGGCTTGCACCATGT...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCAGGATGTAGTGCACCTTATCCATATGGAAGATCAAGTCCAACTCACATATTGAATTTCTTCTGGTaGAAGAGGCAGGGGGATGGA | + |
|
Preference number: 3 (lower is better) Translates to: PAGCSAPYPYGRSSPTHILNFFW*KRQGDG Trigger: TCCATCCCCCTGCCTCTTCAACCAGAAGAAATTCAA...TATGTGAGTTGGACTTGATCTTCCATATGGATAAGGTGCACTACATCCTGCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
||
| 3UTR TCA 72 bp | GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGGAATCTCAGACAATGGCTTTCTTAATAGCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GERERERERERE*ESQTMAFLIAD Trigger: GTCTGCTATTAAGAAAGCCATTGTCTGAGATTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAATTAATCCCTCTGGCTaGACTAGAGGAATTGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VYPQASEHAHHLILFSVQINPSG*TRGIEF Trigger: AAACTCAATTCCTCTAGTCAAGCCAGAGGGATTAAT...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | ATGCAAGTCATTAGCAATGAATTAATCCCTCTGGCTTaGCTAGAGGAATTGAGTTTTCCAAGCCTGAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: MQVISNELIPLA*LEELSFPSLNQ Trigger: CTGGTTCAGGCTTGGAAAACTCAATTCCTCTAGTCAAGCCAGAGGGATTAATTCATTGCTAATGACTTGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR TCA 72 bp | TGTAATCTCAGCATTTTGGAGGTGATGCAGGAGGATTaGGAATTTAGGTTACAAAGTGAGATCTTGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CNLSILEVMQED*EFRLQSEILSQ Trigger: TTGAGACAAGATCTCACTTTGTAACCTAAATTCTCAATCCTCCTGCATCACCTCCAAAATGCTGAGATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTTTACAAAGTGAGATCTaGTCTCAAAGCACAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFLQSEI*SQSTKG Trigger: CCCCTTTGTGCTTTGAGACAAGATCTCACTTTGTAA...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 72 bp | GGATGTGTGCAGAGCAGGTGGGGCTCAGTACTCCTCTaGGTCACTGTGAAGGAGGGCAGGGACCTGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCVQSRWGSVLL*VTVKEGRDLLW Trigger: CCAGAGCAGGTCCCTGCCCTCCTTCACAGTGACCAAGAGGAGTACTGAGCCCCACCTGCTCTGCACACATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR GCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCAGCGGACACGGCCCTTaGTGGAGCTGCAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPWPLVASLMSQEQKEHPSGHGP*WSCREA Trigger: GGCCTCTCTGCAGCTCCAGCAAGGGCCGTGTCCGCT...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGTTCAGTCCCAGTGGTGGGGCCCTGGGAAGCAGGTGGCGCGTTCACAGTCCCACAAAAACCTGGATaGGGTCCAAGATCCCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MCSVPVVGPWEAGGAFTVPQKPG*GPRSQV Trigger: AACTTGGGATCTTGGACCTCATCCAGGTTTTTGTGG...GACTGTGAACGCGCCACCTGCTTCCCAGGGCCCCACCACTGGGACTGAACACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 72 bp | CCACAGCTTCCCAAAAGGTCAAGGCTTACTGTGACCTaGAGGTTTGGGCCTAGCCTGGCAGCCCCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQLPKRSRLTVT*RFGPSLAAPTK Trigger: CTTTGTGGGGGCTGCCAGGCTAGGCCCAAACCTCAAGGTCACAGTAAGCCTTGACCTTTTGGGAAGCTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR CCA 90 bp | ACCGGCAGAGTGCAGGAAGCCCTGCTGGGGACTGAGACACACTGGGTAAGACACACACAAAGTAGAGGGTaGCATAGTGCCGGTAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGRVQEALLGTETHWVRHTQSRG*HSAGKS Trigger: TGATTTACCGGCACTATGCCACCCTCTACTTTGTGT...GTGTCTTACCCAGTGTGTCTCAGTCCCCAGCAGGGCTTCCTGCACTCTGCCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTCAGTCCCAGTGGTGGGGCCCTGGGAAGCAGGTGGCGCGTTCACAGTCTGCACCTTATCCATATaGAAGATCAAGTCCAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MCSVPVVGPWEAGGAFTVCTLSI*KIKSNS Trigger: TGAGTTGGACTTGATCTTCCATATGGATAAGGTGCA...GACTGTGAACGCGCCACCTGCTTCCCAGGGCCCCACCACTGGGACTGAACACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 72 bp | TCAGCCCTTGCCCAGGCTGTCCTTTACTCTCATCCCTaGGCCATGTCACTTACTCCAACTCCATACGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: SALAQAVLYSHP*AMSLTPTPYVT Trigger: TGTCACGTATGGAGTTGGAGTAAGTGACATGGCCAAGGGATGAGAGTAAAGGACAGCCTGGGCAAGGGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR CCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCCGCTTGAGGACCAGATaGAAAGTCTCTCGAACAATC | + |
|
Preference number: 4 (lower is better) Translates to: QPWPLVASLMSQEQKEHPRLRTR*KVSRTI Trigger: GATTGTTCGAGAGACTTTCCATCTGGTCCTCAAGCG...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR TCA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCCGAACAATCTGCTGTTaGATTTCTTCTGGAAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: QPWPLVASLMSQEQKEHPRTICC*ISSGKR Trigger: GCGTTTTCCAGAAGAAATTCAACAGCAGATTGTTCG...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCACTGCTGCTCTTGCAGAGGACCTGAGTCTGCTTCCCAGCACCACAATCTGTTGAATTTCTTCTaGAAAACGCTGGTAGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SEHCCSCRGPESASQHHNLLNFF*KTLVEA Trigger: CGCTTCTACCAGCGTTTTCCAGAAGAAATTCAACAG...ATTGTGGTGCTGGGAAGCAGACTCAGGTCCTCTGCAAGAGCAGCAGTGCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 72 bp | TTTCCCCCAGTAAGTGATACAGGATCTCAGAAGCCCTaGGTGCTAGAGAGGAAGTCAGATGTGTTCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPPVSDTGSQKP*VLERKSDVFSP Trigger: GGGACTGAACACATCTGACTTCCTCTCTAGCACCAAGGGCTTCTGAGATCCTGTATCACTTACTGGGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
||
| 3UTR CAA 72 bp | ATGTATGGTGCCATGGTCAGGCTTGGGAAAGGTAATTaGTCCAGCACTGTATGCAGTAGGCATGACACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MYGAMVRLGKGN*SSTVCSRHDTG Trigger: GCCAGTGTCATGCCTACTGCATACAGTGCTGGACAAATTACCTTTCCCAAGCCTGACCATGGCACCATACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 72 bp | AATAGCAATGAGATGCTTCCAGAGAATGCAGTAGGATaGATCTCAGGTCTGTCCTCTAGCCAAGTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: NSNEMLPENAVG*ISGLSSSQVPT Trigger: GGTGGGCACTTGGCTAGAGGACAGACCTGAGATCAATCCTACTGCATTCTCTGGAAGCATCTCATTGCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 72 bp | CCCATGTTCCAACCACGTAAGCACTGTAGCTGGGCCTaGCTATATTGTGAGTTCTTTTCCCACCCTTTACAC | + |
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Preference number: 4 (lower is better) Translates to: PMFQPRKHCSWA*LYCEFFSHPLH Trigger: GTGTAAAGGGTGGGAAAAGAACTCACAATATAGCAAGGCCCAGCTACAGTGCTTACGTGGTTGGAACATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR TCA 90 bp | TCTCCAACACCATTCCACCCATCACCACCTCCTGCAGGATGTAGTGCACCTTATGTTTTCCATGGTTGTTaGAAACCAGAATCGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SPTPFHPSPPPAGCSAPYVFHGC*KPESPE Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGAAAAC...ATAAGGTGCACTACATCCTGCAGGAGGTGGTGATGGGTGGAATGGTGTTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| 3UTR CAA 72 bp | CACCTCCATGTAAAAATACTGACCTATAGCCAGATGTaGGTGTTGCATGCCTTTAATCCCAGAGGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLHVKILTYSQM*VLHAFNPRGRQ Trigger: CTGCCTGCCTCTGGGATTAAAGGCATGCAACACCAACATCTGGCTATAGGTCAGTATTTTTACATGGAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 72 bp | GCTTGCTTTTGCAGTCTACAGTACCAGGACACAGTTTaGGGGAACCAAGTAGTTTCTAGCAAGCAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: ACFCSLQYQDTV*GNQVVSSKQTP Trigger: AGGTGTTTGCTTGCTAGAAACTACTTGGTTCCCCAAAACTGTGTCCTGGTACTGTAGACTGCAAAAGCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR TCA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAGTTTTCCATGGTTGTTaGAAACCAGAATCGCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VYPQASEHAHHLILFSVQVFHGC*KPESPE Trigger: TTCAGGCGATTCTGGTTTTCAACAACCATGGAAAAC...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 72 bp | CATGTAAAAATACTGACCTATAGCCAGATGTTGGTGTaGCATGCCTTTAATCCCAGAGGCAGGCAGATCTAT | + |
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Preference number: 4 (lower is better) Translates to: HVKILTYSQMLV*HAFNPRGRQIY Trigger: ATAGATCTGCCTGCCTCTGGGATTAAAGGCATGCAACACCAACATCTGGCTATAGGTCAGTATTTTTACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCACCAATCAAACTTCCACCTTCTAAGAAGTTACAGATGTTGTCATCTGTTCAGCCAGGGATATaGAGTAAGAACAAAACGCTG | + |
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Preference number: 4 (lower is better) Translates to: SEPPIKLPPSKKLQMLSSVQPGI*SKNKTL Trigger: CAGCGTTTTGTTCTTACTCCATATCCCTGGCTGAAC...AGATGACAACATCTGTAACTTCTTAGAAGGTGGAAGTTTGATTGGTGGCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| 3UTR CAA 72 bp | ACTGAGCTGAGGGCAACTGAAGCTATGACCTTAGTTTaGAAAGTGAAGATAAAGGACGCTTGTTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: TELRATEAMTLV*KVKIKDACFFF Trigger: GAAGAAGAAACAAGCGTCCTTTATCTTCACTTTCAAAACTAAGGTCATAGCTTCAGTTGCCCTCAGCTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CCA 90 bp | CTGAATCTAATTCCTTCTTGTTTCTTTTCGCTTATAGCTGGTCTTTGCTACTTTGTCTCCACAAAAACCTaGATGAGGTCCAAGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: LNLIPSCFFSLIAGLCYFVSTKT*MRSKIP Trigger: TGGGATCTTGGACCTCATCCAGGTTTTTGTGGAGAC...AAAGTAGCAAAGACCAGCTATAAGCGAAAAGAAACAAGAAGGAATTAGATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| 3UTR CAA 72 bp | TATGACCTTAGTTTTGAAAGTGAAGATAAAGGACGCTaGTTTCTTCTTCAAACTGCAAACACTTGCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YDLSFESEDKGR*FLLQTANTCCQ Trigger: CTGGCAGCAAGTGTTTGCAGTTTGAAGAAGAAACAAGCGTCCTTTATCTTCACTTTCAAAACTAAGGTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS GCA 90 bp | AGGGAGGTTGATGTTCTTCACAGCGGACACGGCCCTTGCTGGAGCTaGAGAGAGGCCGCCCTCCGACTTCTCCAGTCGGTTTTGAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: REVDVLHSGHGPCWS*REAALRLLQSVLSF Trigger: GAAGCTCAAAACCGACTGGAGAAGTCGGAGGGCGGCCTCTCTGCAGCTCCAGCAAGGGCCGTGTCCGCTGTGAAGAACATCAACCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS CCA 90 bp | GATCTCAGGGAGGTTGATGTTCTTCACAGCGGACACGGCCCTTGCTaGAGCTGCAGAGAGGCCGCCCTCCGACTTCTCCAGTCGGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: DLREVDVLHSGHGPC*SCREAALRLLQSVL Trigger: CAAAACCGACTGGAGAAGTCGGAGGGCGGCCTCTCTGCAGCTCCAGCAAGGGCCGTGTCCGCTGTGAAGAACATCAACCTCCCTGAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | CCAGAGAATGCAGTAGGATTGATCTCAGGTCTGTCCTCTAGCCAAGTGCCCACCCAGCGGACACGGCCCTaGCTGGAGCTGCAGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: PENAVGLISGLSSSQVPTQRTRP*LELQRG Trigger: GCCTCTCTGCAGCTCCAGCAAGGGCCGTGTCCGCTG...GGTGGGCACTTGGCTAGAGGACAGACCTGAGATCAATCCTACTGCATTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCCGCGGTTTTCCATGGTaGTTGAAAACCAGAATCGCC | + |
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Preference number: 5 (lower is better) Translates to: QPWPLVASLMSQEQKEHPRGFPW*LKTRIA Trigger: GGCGATTCTGGTTTTCAACAACCATGGAAAACCGCG...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGCCTCTGGTTGCGTCACTGATGTCTCAAGAGCAAAAGGAACACCCCACAAACTGGGACAGGTaGGGGACTTTGATGTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QPWPLVASLMSQEQKEHPTNWDR*GTLMLR Trigger: CCTCAACATCAAAGTCCCCAACCTGTCCCAGTTTGT...GGGGTGTTCCTTTTGCTCTTGAGACATCAGTGACGCAACCAGAGGCCAGGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | TTCCTGTCTGACCAGTGTGTTTCCTGTTCTGCTCTCCCCGGACGTCAGGTTGCTAAGAAGTTACAGATGTaGTCATCTCGCTTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: FLSDQCVSCSALPGRQVAKKLQM*SSRLRT Trigger: GGTCCTCAAGCGAGATGACAACATCTGTAACTTCTT...AGCAACCTGACGTCCGGGGAGAGCAGAACAGGAAACACACTGGTCAGACAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAAGACAGGTTGGGGACTTaGATGTTGAGGTCACCGATG | + |
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Preference number: 5 (lower is better) Translates to: VYPQASEHAHHLILFSVQDRLGT*MLRSPM Trigger: CATCGGTGACCTCAACATCAAAGTCCCCAACCTGTC...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | GTTTATCCCCAAGCAAGCGAACATGCCCATCATCTCATCCTTTTCTCGGTACAATTGGGGACTTTGATGTaGAGGTCACCGATGTTGATG | + |
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Preference number: 5 (lower is better) Translates to: VYPQASEHAHHLILFSVQLGTLM*RSPMLM Trigger: CATCAACATCGGTGACCTCAACATCAAAGTCCCCAA...TTGTACCGAGAAAAGGATGAGATGATGGGCATGTTCGCTTGCTTGGGGATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | GCAGGATGTAGTGCACCTTATCCATATGGAAGATCAAGTCCAACTCACATACATCGCGGTTTTCCATGGTaGTTGAAAACCAGAATCGCC | + |
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Preference number: 5 (lower is better) Translates to: AGCSAPYPYGRSSPTHIHRGFPW*LKTRIA Trigger: GGCGATTCTGGTTTTCAACAACCATGGAAAACCGCG...ATGTATGTGAGTTGGACTTGATCTTCCATATGGATAAGGTGCACTACATCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206725.2 |
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| CDS-3UTR CAA 90 bp | TCACTGATGTCTCAAGAGCAAAAGGAACACCCCTCTCCAGAAGGACCAAGGACTTCGAACAATCTGCTGTaGAATTTCTTCTGGAAAACG | + |
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Preference number: 5 (lower is better) Translates to: SLMSQEQKEHPSPEGPRTSNNLL*NFFWKT Trigger: CGTTTTCCAGAAGAAATTCAACAGCAGATTGTTCGA...AGTCCTTGGTCCTTCTGGAGAGGGGTGTTCCTTTTGCTCTTGAGACATCAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS-3UTR CAA 90 bp | AAATGCTTGATTCCAGCCACTGTAAAAGGAGATGAATGTACACAAATGGCAATAGGGATCTCAGGGAGGTaGATGTTCTTCACAGCGGAC | + |
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Preference number: 5 (lower is better) Translates to: KCLIPATVKGDECTQMAIGISGR*MFFTAD Trigger: GTCCGCTGTGAAGAACATCAACCTCCCTGAGATCCC...TATTGCCATTTGTGTACATTCATCTCCTTTTACAGTGGCTGGAATCAAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS GCA 72 bp | AGGGAGGTTGATGTTCTTCACAGCGGACACGGCCCTTaGTGGAGCTGCAGAGAGGCCGCCCTCCGACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: REVDVLHSGHGP*WSCREAALRLL Trigger: GAGAAGTCGGAGGGCGGCCTCTCTGCAGCTCCAGCAAGGGCCGTGTCCGCTGTGAAGAACATCAACCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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| CDS CAA 72 bp | GAGGACCAGATGGAAAGTCTCTCGAACAATCTGCTGTaGAATTTCTTCTGGAAAACGCTGGTAGAAGCGGAC | + |
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Preference number: 6 (lower is better) Translates to: EDQMESLSNNLL*NFFWKTLVEAD Trigger: GTCCGCTTCTACCAGCGTTTTCCAGAAGAAATTCAACAGCAGATTGTTCGAGAGACTTTCCATCTGGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075657.8 |
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