Pregenerated sensors for AP3S1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024480

Ensembl transcript IDs: ENSMUST00000025357.9, ENSMUST00000225520.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR GCA 90 bp	AAACTACAAGGAGAAACTAGAATGGAAAATAGGCTACAGGGACTATATGGGTTTGGCCTAAAAAGTAATTaGCTTCGACATCATTTTGCT	+
Preference number: 2 (lower is better) Translates to: KLQGETRMENRLQGLYGFGLKSN*LRHHFA Trigger: AGCAAAATGATGTCGAAGGCAATTACTTTTTAGGCC...AAACCCATATAGTCCCTGTAGCCTATTTTCCATTCTAGTTTCTCCTTGTAGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225520.2
3UTR CCA 72 bp	ATACAACACTCGGTCTTTGACAGAGCAGTTTCTGACTaGTTCAGTGAGCCACTGAGAAATAAAAACGTGAGT	+
Preference number: 3 (lower is better) Translates to: IQHSVFDRAVSD*FSEPLRNKNVS Trigger: ACTCACGTTTTTATTTCTCAGTGGCTCACTGAACCAGTCAGAAACTGCTCTGTCAAAGACCGAGTGTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025357.9

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