Pregenerated sensors for AP3M2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031539Ensembl transcript IDs: ENSMUST00000163739.3, ENSMUST00000210656.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGAAAAGCAAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTaGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QEKQGPGPVRLHKHQ*RSGSMDMIHWVASP Trigger: GGGACTCGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTTGCTTTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 90 bp | AGGTACAGACAATGGAAAGCAGCTTCGTACACTGAATGTCCTCAGTaGGCTCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGG | + |
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Preference number: 1 (lower is better) Translates to: RYRQWKAASYTECPQ*AHTHLGILMGPSDR Trigger: CCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTACGAAGCTGCTTTCCATTGTCTGTACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATaGAAAGCAGCTTCGTACACTGAATGTCCTCAGTGGGCTCACACT | + |
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Preference number: 1 (lower is better) Translates to: CLSVCLGAVADRYRQ*KAASYTECPQWAHT Trigger: AGTGTGAGCCCACTGAGGACATTCAGTGTACGAAGCTGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 90 bp | GGAAGCCGGTCTCCTTCTCCCTCCAAGCACAACACAGAGGCAAGTTaGGCCCTAAGCTGTAAATTAAAAACAACACACCCGCCTTTTATG | + |
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Preference number: 1 (lower is better) Translates to: GSRSPSPSKHNTEAS*ALSCKLKTTHPPFM Trigger: CATAAAAGGCGGGTGTGTTGTTTTTAATTTACAGCTTAGGGCGCAACTTGCCTCTGTGTTGTGCTTGGAGGGAGAAGGAGACCGGCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGCATCACTTATGTGGCTaGAGACGGAGGACAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QAAALQATPPELSQCCAGHHLCG*RRRTKG Trigger: CCCTTTTGTCCTCCGTCTTCAGCCACATAAGTGATG...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGCATCACTTATGTGGCTaGAGACGGAGGACAAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: KAQGQSGFTNISGGQGAWHHLCG*RRRTKG Trigger: CCCTTTTGTCCTCCGTCTTCAGCCACATAAGTGATG...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CAA 90 bp | CCTGCACAACCTTTGCTGACAATCACTGGGTGGGGTTGGCGAGGCTaGGCAGTACCCATGATGCCTAGGTCTGCTGATCCTATACTCCCA | + |
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Preference number: 2 (lower is better) Translates to: PAQPLLTITGWGWRG*AVPMMPRSADPILP Trigger: TGGGAGTATAGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGGTTGTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CAA 90 bp | GACCACACACAGAGCGAGCAGCTATTAAGTTTCCCTGCACAACCTTaGCTGACAATCACTGGGTGGGGTTGGCGAGGCTTGGCAGTACCC | + |
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Preference number: 2 (lower is better) Translates to: DHTQSEQLLSFPAQP*LTITGWGWRGLAVP Trigger: GGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGGTTGTGCAGGGAAACTTAATAGCTGCTCGCTCTGTGTGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGAAGCCTTTCTACACGTaGGAGGGGTCTGAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: KAQGQSGFTNISGGQGAWKPFYT*EGSERN Trigger: GTTTCTTTCAGACCCCTCTCACGTGTAGAAAGGCTT...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCACCAGAACTCAGTCAGTaGTGCGCTGGGGTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: CLSVCLGAVADRYRQWKAPELSQ*CAGVGL Trigger: GAGGCCAACCCCAGCGCAGCACTGACTGAGTTCTGG...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCAGAACTCAGTCAGTGCTaGGCTGGGGTTGGCCTCGTT | + |
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Preference number: 2 (lower is better) Translates to: CLSVCLGAVADRYRQWKAELSQC*AGVGLV Trigger: AACGAGGCCAACCCCAGCGCAGCACTGACTGAGTTC...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | TACACTGAATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTGATGGGACCTACAAAAGGGAGTAGATaGAGCCCGGAGGGAACGGAC | + |
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Preference number: 2 (lower is better) Translates to: YTECPQWAHTHLGILMGPTKGSR*SPEGTD Trigger: GTCCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGT...AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACAACAAAAGGGAGTAGATaGAGCCCGGAGGGAACGGAC | + |
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Preference number: 2 (lower is better) Translates to: GRSFPTATVLKVMKCSVTTKGSR*SPEGTD Trigger: GTCCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGT...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTTGGCGAGGCTTGGCAGTACCCATGATGCCTAGGTCTGCTGATCCTATATGTCTTCATTGTGGGTaGTACCAGGATGAACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: WGWRGLAVPMMPRSADPICLHCG*YQDEPG Trigger: TCCTGGTTCATCCTGGTACCACCCACAATGAAGACA...TATAGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTTGGCGAGGCTTGGCAGTACCCATGATGCCTAGGTCTGCTGATCCTATAGTTTTAAGTGCGGACTaGGAGCTATTTGGGAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: WGWRGLAVPMMPRSADPIVLSAD*ELFGSC Trigger: ACAGCTCCCAAATAGCTCCCAGTCCGCACTTAAAAC...TATAGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGGAACTTTCAAAGTCCTaGACATACAAAGCCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: KAQGQSGFTNISGGQGAWELSKS*TYKAFL Trigger: TAGAAAGGCTTTGTATGTCCAGGACTTTGAAAGTTC...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | TACACTGAATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTGATGGGACCTCTCATAAAACCTGCCTaGACCGAGCACTGCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: YTECPQWAHTHLGILMGPLIKPA*TEHCCF Trigger: AAAACAGCAGTGCTCGGTGCAGGCAGGTTTTATGAG...AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCATTAAAAGTGATGAAATaGAGTGTCACAGGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPLKVMK*SVTGRC Trigger: GCAGCGGCCTGTGACACTGCATTTCATCACTTTTAA...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTCCAGAACTCAGTCAGTaGTGCGCTGGGGTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFPELSQ*CAGVGL Trigger: GAGGCCAACCCCAGCGCAGCACTGACTGAGTTCTGG...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR CCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCAGAACTTTCAAAGTCCTaGACATACAAAGCCTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPELSKS*TYKAFL Trigger: TAGAAAGGCTTTGTATGTCCAGGACTTTGAAAGTTC...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR-3UTR GCA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTTTAAAAGTGATGAAATaGAGTGTCACAGGCCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFLKVMK*SVTGRC Trigger: GCAGCGGCCTGTGACACTGCATTTCATCACTTTTAA...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | CAAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTaGAGGTCAGGGAGCATGGACATGATCCACTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: QGPGPVRLHKHQ*RSGSMDMIHWV Trigger: CACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | TCACTGGGTGGGGTTGGCGAGGCTTGGCAGTACCCATaGTGCCTAGGTCTGCTGATCCTATACTCCCAACAC | + |
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Preference number: 3 (lower is better) Translates to: SLGGVGEAWQYP*CLGLLILYSQH Trigger: GTGTTGGGAGTATAGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | CATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTaGGTGGCGAGTCCCCCACATCAACTCCACCACTAT | + |
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Preference number: 3 (lower is better) Translates to: HQWRSGSMDMIH*VASPPHQLHHY Trigger: ATAGTGGTGGAGTTGATGTGGGGGACTCGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | CCTGCACAACCTTTGCTGACAATCACTGGGTGGGGTTaGCGAGGCTTGGCAGTACCCATGATGCCTAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: PAQPLLTITGWG*RGLAVPMMPRS Trigger: AGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGGTTGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | TTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATaGTCCACTGGGTGGCGAGTCCCCCACATCAACTCC | + |
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Preference number: 3 (lower is better) Translates to: FTNISGGQGAWT*STGWRVPHINS Trigger: GGAGTTGATGTGGGGGACTCGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 72 bp | TCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATaGAGTGTCACAGGCCGCTGCTCTCCAGGCCACGCC | + |
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Preference number: 3 (lower is better) Translates to: SFPTATVLKVMK*SVTGRCSPGHA Trigger: GGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | AATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTaGTGGGACCTTCAGACAGGAAAAGCAAGGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NVLSGLTLTWGF*WDLQTGKARPR Trigger: CCTGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 72 bp | GTGTTAAAAGTGATGAAATGCAGTGTCACAGGCCGCTaGTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VLKVMKCSVTGR*SPGHASRTQSV Trigger: CACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCATCACTTTTAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 72 bp | TCACTATGGTATCTCTTCACACCAGCCTCTCAGTCCTaGCCCCCATCGAGCAGATCTGTCTTCATTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SLWYLFTPASQS*PPSSRSVFIVG Trigger: ACCCACAATGAAGACAGATCTGCTCGATGGGGGGCAGGACTGAGAGGCTGGTGTGAAGAGATACCATAGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | CGAATGAACTTTCTCTCCCTCCATCACTTATGTGGCTaGAGACGGAGGACAAAAGGGAGTAGATGGAGCCCG | + |
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Preference number: 3 (lower is better) Translates to: RMNFLSLHHLCG*RRRTKGSRWSP Trigger: CGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATAAGTGATGGAGGGAGAGAAAGTTCATTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | CTTAGAAATAGGACTTCAGAGGAGAGCCATGCAGACTaGAGGAAGCCGGTCTCCTTCTCCCTCCAAGCACAA | + |
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Preference number: 3 (lower is better) Translates to: LRNRTSEESHAD*RKPVSFSLQAQ Trigger: TTGTGCTTGGAGGGAGAAGGAGACCGGCTTCCTTCAGTCTGCATGGCTCTCCTCTGAAGTCCTATTTCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | GAGATTCCAATCGCTTTTCTCGACAACCCTTCACTATaGTATCTCTTCACACCAGCCTCTCAGTCCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: EIPIAFLDNPSL*YLFTPASQSCP Trigger: GGGGCAGGACTGAGAGGCTGGTGTGAAGAGATACCATAGTGAAGGGTTGTCGAGAAAAGCGATTGGAATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | CAATGGAAAGCAGCTTCGTACACTGAATGTCCTCAGTaGGCTCACACTCACTTGGGGATTCTGATGGGACCT | + |
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Preference number: 3 (lower is better) Translates to: QWKAASYTECPQ*AHTHLGILMGP Trigger: AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTACGAAGCTGCTTTCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | GTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATaGAAAGCAGCTTCGTACACTGAATGTCCTCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: VCLGAVADRYRQ*KAASYTECPQW Trigger: CCACTGAGGACATTCAGTGTACGAAGCTGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | ATTAAGTTTCCCTGCACAACCTTTGCTGACAATCACTaGGTGGGGTTGGCGAGGCTTGGCAGTACCCATGAT | + |
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Preference number: 3 (lower is better) Translates to: IKFPCTTFADNH*VGLARLGSTHD Trigger: ATCATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGGTTGTGCAGGGAAACTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 72 bp | TCTCCTTCTCCCTCCAAGCACAACACAGAGGCAAGTTaGGCCCTAAGCTGTAAATTAAAAACAACACACCCG | + |
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Preference number: 3 (lower is better) Translates to: SPSPSKHNTEAS*ALSCKLKTTHP Trigger: CGGGTGTGTTGTTTTTAATTTACAGCTTAGGGCGCAACTTGCCTCTGTGTTGTGCTTGGAGGGAGAAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | GCTAATCCCAGTGCGGTTTCACGTCAAGCGTGGACTTaGACTTTCAAAGTCCTGGACATACAAAGCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ANPSAVSRQAWT*TFKVLDIQSLS Trigger: AGAAAGGCTTTGTATGTCCAGGACTTTGAAAGTTCAAGTCCACGCTTGACGTGAAACCGCACTGGGATTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR CCA 72 bp | TTTCACGTCAAGCGTGGACTTGAACTTTCAAAGTCCTaGACATACAAAGCCTTTCTACACGTGAGAGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: FHVKRGLELSKS*TYKAFLHVRGV Trigger: GACCCCTCTCACGTGTAGAAAGGCTTTGTATGTCCAGGACTTTGAAAGTTCAAGTCCACGCTTGACGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | CACAGAGAAACTCTACTCGGCAGCAAAAACAAGTCCTaGCCGCAGCAAGAGAACACTAGCCAAAAGATAGAA | + |
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Preference number: 3 (lower is better) Translates to: HRETLLGSKNKS*PQQENTSQKIE Trigger: TTCTATCTTTTGGCTAGTGTTCTCTTGCTGCGGTCAGGACTTGTTTTTGCTGCCGAGTAGAGTTTCTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR TCA 72 bp | AAGAAATCAATAGAGACATCTTCCATTGGGTTTAGGTaGCTGAAACCAAACATCACAGGCCGGTCTTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KKSIETSSIGFR*LKPNITGRSFP Trigger: GGGGAAAGACCGGCCTGTGATGTTTGGTTTCAGTCACCTAAACCCAATGGAAGATGTCTCTATTGATTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| 3UTR GCA 72 bp | CTAGTGGACACATTGAAACGAATTAAGAATACTCTGTaGTCCTTCAGCGGCTATGGTTTAAACTGTGGACTA | + |
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Preference number: 3 (lower is better) Translates to: LVDTLKRIKNTL*SFSGYGLNCGL Trigger: TAGTCCACAGTTTAAACCATAGCCGCTGAAGGAGCACAGAGTATTCTTAATTCGTTTCAATGTGTCCACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGCGACAGCTGCCCAGTTaGAAGCTGGTCCCCCACATT | + |
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Preference number: 4 (lower is better) Translates to: QAAALQATPPELSQCCAGRQLPS*KLVPHI Trigger: AATGTGGGGGACCAGCTTCCAACTGGGCAGCTGTCG...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGCTTGGATCTCAGCGGTaGCTGTGGAACCTGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: QAAALQATPPELSQCCAGLGSQR*LWNLTC Trigger: ACAAGTCAGGTTCCACAGTCACCGCTGAGATCCAAG...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGTTCAAAGCGTCCAAGTaGACTGCTGTCCCGGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: QAAALQATPPELSQCCAGFKASK*TAVPEA Trigger: AGCTTCCGGGACAGCAGTTCACTTGGACGCTTTGAA...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR TCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGAACGTGTGTGTCCCCTaGGATGGAGTGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QAAALQATPPELSQCCAGNVCVP*DGVRLI Trigger: TATGAGCCTCACTCCATCTCAGGGGACACACACGTT...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGCGGAGGCACATTTTCTaGCTCGGTAGCTCTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAAALQATPPELSQCCAGRRHIF*LGSSLL Trigger: CAAGAGAGAGCTACCGAGGCAGAAAATGTGCCTCCG...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGTGCCGTCAGGAGGGATaGAGGAGAGGATGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAQGQSGFTNISGGQGAWCRQEG*RRGCAQ Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGACGGCA...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR GCA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGGGCACCACCGACAGCTaGCCAGTTGGAAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: YVAEDGGQKGVDGARRERGTTDS*PVGSWS Trigger: GGACCAGCTTCCAACTGGGCAGCTGTCGGTGGTGCC...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGGGCACCACCGACAGCTaGCCAGTTGGAAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LHKHQWRSGSMDMIHWVAGTTDS*PVGSWS Trigger: GGACCAGCTTCCAACTGGGCAGCTGTCGGTGGTGCC...CGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAATGCAGTGTCACAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGCGACAGCTGCCCAGTTaGAAGCTGGTCCCCCACATT | + |
|
Preference number: 4 (lower is better) Translates to: MKCSVTGRCSPGHASRTQRQLPS*KLVPHI Trigger: AATGTGGGGGACCAGCTTCCAACTGGGCAGCTGTCG...CTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGTGCCGTCAGGAGGGATaGAGGAGAGGATGCGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHKHQWRSGSMDMIHWVACRQEG*RRGCAQ Trigger: CTGAGCGCATCCTCTCCTTCATCCCTCCTGACGGCA...CGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAATGCAGTGTCACAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGCACACACAGAGCGGCTaGCCACACTTTTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MKCSVTGRCSPGHASRTQHTQSG*PHFSSV Trigger: AACACTGGAAAAGTGTGGTCAGCCGCTCTGTGTGTG...CTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | ATGAAATGCAGTGTCACAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTTCAAAGCGTCCAAGTaGACTGCTGTCCCGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKCSVTGRCSPGHASRTQFKASK*TAVPEA Trigger: AGCTTCCGGGACAGCAGTTCACTTGGACGCTTTGAA...CTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGGCATCGATCACCCCTTaGATCTCAGCGGTGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YVAEDGGQKGVDGARRERASITP*ISAVTV Trigger: CACAGTCACCGCTGAGATCCAAGGGGTGATCGATGC...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| 3UTR CAA 72 bp | CCTTTGCTGACAATCACTGGGTGGGGTTGGCGAGGCTaGGCAGTACCCATGATGCCTAGGTCTGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLTITGWGWRG*AVPMMPRSADP Trigger: AGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGAAACGGACACAGGGGTaGAAGCTAACATCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YVAEDGGQKGVDGARRERKRTQG*KLTSSS Trigger: GCTGGACGATGTTAGCTTCCACCCCTGTGTCCGTTT...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGCGTCCCCTTCAAACTTaGCAGCTTCTGTGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KAQGQSGFTNISGGQGAWRPLQT*QLLWVY Trigger: ATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACG...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGCCAGACGGTTCACTTTaGGTCCAGAAATGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHKHQWRSGSMDMIHWVAPDGSL*VQKWPA Trigger: AGCTGGCCATTTCTGGACTCAAAGTGAACCGTCTGG...CGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| 3UTR CAA 72 bp | CAGAGCGAGCAGCTATTAAGTTTCCCTGCACAACCTTaGCTGACAATCACTGGGTGGGGTTGGCGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSEQLLSFPAQP*LTITGWGWRGL Trigger: CAAGCCTCGCCAACCCCACCCAGTGATTGTCAGCAAAGGTTGTGCAGGGAAACTTAATAGCTGCTCGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | TACACTGAATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTGATGGGACCTCACACACAGAGCGGCTaGCCACACTTTTCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTECPQWAHTHLGILMGPHTQSG*PHFSSV Trigger: AACACTGGAAAAGTGTGGTCAGCCGCTCTGTGTGTG...AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGATTGTCTTTGATCACTaGCTCGGAACAGACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YVAEDGGQKGVDGARRERIVFDH*LGTDPK Trigger: TTTGGGGTCTGTTCCGAGCCAGTGATCAAAGACAAT...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCAAAACGGACACAGGGGTaGAAGCTAACATCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPKRTQG*KLTSSS Trigger: GCTGGACGATGTTAGCTTCCACCCCTGTGTCCGTTT...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCAGGTGAAGGAATTCAATaGCAAACAGAGGCGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPGEGIQ*QTEAGP Trigger: AGGTCCCGCCTCTGTTTGTCATTGAATTCCTTCACC...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCACCACCACATTGTCTTTaGTCACTGGCTCGGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPPPHCL*SLARNR Trigger: TCTGTTCCGAGCCAGTGATCAAAGACAATGTGGTGG...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACAAACGTGTGTGTCCCCTaGGATGGAGTGAGGCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: GRSFPTATVLKVMKCSVTNVCVP*DGVRLI Trigger: TATGAGCCTCACTCCATCTCAGGGGACACACACGTT...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCACCAGACGGTTCACTTTaGGTCCAGAAATGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVCLGAVADRYRQWKAPDGSL*VQKWPA Trigger: AGCTGGCCATTTCTGGACTCAAAGTGAACCGTCTGG...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCACGGAGGCACATTTTCTaGCTCGGTAGCTCTCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSVCLGAVADRYRQWKARRHIF*LGSSLL Trigger: CAAGAGAGAGCTACCGAGGCAGAAAATGTGCCTCCG...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGTTGGCGAGGCTTGGCAGTACCCATGATGCCTAGGTCTGCTGATCCTATAATTGTCTTTGATCACTaGCTCGGAACAGACCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WGWRGLAVPMMPRSADPIIVFDH*LGTDPK Trigger: TTTGGGGTCTGTTCCGAGCCAGTGATCAAAGACAAT...TATAGGATCAGCAGACCTAGGCATCATGGGTACTGCCAAGCCTCGCCAACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCAACTCCTTTGGGCATCTaGCTGGTGACAATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVCLGAVADRYRQWKATPLGI*LVTITP Trigger: GGGTGTGATTGTCACCAGCCAGATGCCCAAAGGAGT...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR TCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCATTCTTTGAGGATGTTTaGCTCCGTAGCCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPFFEDV*LRSQGE Trigger: TTCCCCTTGGCTACGGAGTCAAACATCCTCAAAGAA...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CCA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCACGTCCCCTTCAAACTTaGCAGCTTCTGTGGGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPRPLQT*QLLWVY Trigger: ATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACG...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCATTCTTTGAGGATGTTTaGCTCCGTAGCCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLSVCLGAVADRYRQWKAFFEDV*LRSQGE Trigger: TTCCCCTTGGCTACGGAGTCAAACATCCTCAAAGAA...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CCA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTACTCCTTTGGGCATCTaGCTGGTGACAATCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFTPLGI*LVTITP Trigger: GGGTGTGATTGTCACCAGCCAGATGCCCAAAGGAGT...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR TCA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTGGTGAAGGAATTCAATaGCAAACAGAGGCGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFGEGIQ*QTEAGP Trigger: AGGTCCCGCCTCTGTTTGTCATTGAATTCCTTCACC...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR GCA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTTGCTGGATCTTAAACTaGAGGTTAATCGTAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFCWILN*RLIVGF Trigger: GAACCCTACGATTAACCTGCAGTTTAAGATCCAGCA...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGCCGACAGCTGCCCAGTaGGAAGCTGGTCCCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QAAALQATPPELSQCCAGPTAAQ*EAGPPH Trigger: ATGTGGGGGACCAGCTTCCAACTGGGCAGCTGTCGG...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGTTCCCCATGGTCTGCTaGGGTCCCACCGTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QAAALQATPPELSQCCAGFPMVC*GPTVIS Trigger: TGAAATCACGGTGGGACCCAAGCAGACCATGGGGAA...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGTCAGTGCTGCGCTGGGGGCTTTATCAGTTCTTaGAGGATGTTTGACTCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: QAAALQATPPELSQCCAGGFISS*RMFDSV Trigger: TACGGAGTCAAACATCCTCAAAGAACTGATAAAGCC...CCCAGCGCAGCACTGACTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGAGCTGGTCCCCCACATaGGTGCTTCCTGTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YVAEDGGQKGVDGARRERSWSPT*VLPVMV Trigger: CACCATCACAGGAAGCACCAATGTGGGGGACCAGCT...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | ATGAAATGCAGTGTCACAGGCCGCTGCTCTCCAGGCCACGCCTCCAGAACTCAGCTCGGTAGCTCTCTCTaGGGCCTCGAAGAAGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: MKCSVTGRCSPGHASRTQLGSSL*GLEEVI Trigger: GATTACTTCTTCGAGGCCCAAGAGAGAGCTACCGAG...CTGAGTTCTGGAGGCGTGGCCTGGAGAGCAGCGGCCTGTGACACTGCATTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGGCCAAGGGGAACCCGTaGTCCAGCATCTCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHKHQWRSGSMDMIHWVAAKGNP*SSISSN Trigger: GTTGGAAGAGATGCTGGACAACGGGTTCCCCTTGGC...CGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | TATGTGGCTGAAGACGGAGGACAAAAGGGAGTAGATGGAGCCCGGAGGGAACGGTTCCCCATGGTCTGCTaGGGTCCCACCGTGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YVAEDGGQKGVDGARRERFPMVC*GPTVIS Trigger: TGAAATCACGGTGGGACCCAAGCAGACCATGGGGAA...CCGTTCCCTCCGGGCTCCATCTACTCCCTTTTGTCCTCCGTCTTCAGCCACATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCAGGGCCAGTCCGGCTTCACAAACATCAGTGGAGGTCAGGGAGCATGGTCGTCCCCTTCAAACTaGGCAGCTTCTGTGGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KAQGQSGFTNISGGQGAWSSPSN*AASVGL Trigger: TAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGA...CCATGCTCCCTGACCTCCACTGATGTTTGTGAAGCCGGACTGGCCCTGGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCAGCCAAGGGGAACCCGTaGTCCAGCATCTCTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPAKGNP*SSISSN Trigger: GTTGGAAGAGATGCTGGACAACGGGTTCCCCTTGGC...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAACATCAGTGGAGGTCAGGGAGCATGGACATGATCCACTGGGTGGCGACCACCACATTGTCTTaGATCACTGGCTCGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LHKHQWRSGSMDMIHWVATTTLS*ITGSEQ Trigger: CTGTTCCGAGCCAGTGATCAAAGACAATGTGGTGGT...CGCCACCCAGTGGATCATGTCCATGCTCCCTGACCTCCACTGATGTTTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACAAGCTGGTCCCCCACATaGGTGCTTCCTGTGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRSFPTATVLKVMKCSVTSWSPT*VLPVMV Trigger: CACCATCACAGGAAGCACCAATGTGGGGGACCAGCT...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS-3UTR CAA 90 bp | TACACTGAATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTGATGGGACCTTCCAGACGGTTCACTTaGAGTCCAGAAATGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YTECPQWAHTHLGILMGPSRRFT*SPEMAS Trigger: GCTGGCCATTTCTGGACTCAAAGTGAACCGTCTGGA...AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
||
| CDS CCA 90 bp | TCCGACCTGGAGACCCATCGTCCCCTTCAAACTTGGCAGCTTCTGTaGGTTTATTTTTCCTACATCCCAAGACAGCATCTTTGTCACGGG | + |
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Preference number: 5 (lower is better) Translates to: SDLETHRPLQTWQLL*VYFSYIPRQHLCHG Trigger: CCCGTGACAAAGATGCTGTCTTGGGATGTAGGAAAAATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 90 bp | TGCAGGTTAATCGTAGGGTTCTCATCTGGTTTAGAAGCTCCGACCTaGAGACCCATCGTCCCCTTCAAACTTGGCAGCTTCTGTGGGTTT | + |
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Preference number: 5 (lower is better) Translates to: CRLIVGFSSGLEAPT*RPIVPFKLGSFCGF Trigger: AAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGAGCTTCTAAACCAGATGAGAACCCTACGATTAACCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACACTCGGTAGCTCTCTCTaGGGCCTCGAAGAAGTAATC | + |
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Preference number: 5 (lower is better) Translates to: GRSFPTATVLKVMKCSVTLGSSL*GLEEVI Trigger: GATTACTTCTTCGAGGCCCAAGAGAGAGCTACCGAG...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACATCCAGACGGTTCACTTaGAGTCCAGAAATGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GRSFPTATVLKVMKCSVTSRRFT*SPEMAS Trigger: GCTGGCCATTTCTGGACTCAAAGTGAACCGTCTGGA...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS TCA 90 bp | ACAGGCATCGATCACCCCTTGGATCTCAGCGGTGACTGTGGAACCTaGCTTGTCAATGATGGCGTCTATCTCTTCCACCACATCGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TGIDHPLDLSGDCGT*LVNDGVYLFHHIEI Trigger: TATTTCGATGTGGTGGAAGAGATAGACGCCATCATTGACAAGTCAGGTTCCACAGTCACCGCTGAGATCCAAGGGGTGATCGATGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGTCTGTCTGTCTGGGAGCTGTAGCCGATAGGTACAGACAATGGAAAGCATACACCACCACCACATaGTCTTTGATCACTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: CLSVCLGAVADRYRQWKAYTTTT*SLITGS Trigger: CGAGCCAGTGATCAAAGACAATGTGGTGGTGGTGTA...TGCTTTCCATTGTCTGTACCTATCGGCTACAGCTCCCAGACAGACAGACAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | GGCCGGTCTTTCCCCACGGCAACTGTGTTAAAAGTGATGAAATGCAGTGTCACACTTCCTGTGATGGTGTaGACCACTGTCCGGAGAATA | + |
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Preference number: 5 (lower is better) Translates to: GRSFPTATVLKVMKCSVTLPVMV*TTVRRI Trigger: TATTCTCCGGACAGTGGTCAACACCATCACAGGAAG...TGTGACACTGCATTTCATCACTTTTAACACAGTTGCCGTGGGGAAAGACCGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 90 bp | TGGTTTAGAAGCTCCGACCTGGAGACCCATCGTCCCCTTCAAACTTaGCAGCTTCTGTGGGTTTATTTTTCCTACATCCCAAGACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: WFRSSDLETHRPLQT*QLLWVYFSYIPRQH Trigger: ATGCTGTCTTGGGATGTAGGAAAAATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGAGCTTCTAAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | TACACTGAATGTCCTCAGTGGGCTCACACTCACTTGGGGATTCTGATGGGACCTATGCCTTTAAAGGGCTaGTACTTCTCCCCGTACATA | + |
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Preference number: 5 (lower is better) Translates to: YTECPQWAHTHLGILMGPMPLKG*YFSPYI Trigger: TATGTACGGGGAGAAGTACAAGCCCTTTAAAGGCAT...AGGTCCCATCAGAATCCCCAAGTGAGTGTGAGCCCACTGAGGACATTCAGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | TCACACTCACTTGGGGATTCTGATGGGACCTTCAGACAGGAAAAGCAAGGCCCAATGCCTTTAAAGGGCTaGTACTTCTCCCCGTACATA | + |
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Preference number: 5 (lower is better) Translates to: SHSLGDSDGTFRQEKQGPMPLKG*YFSPYI Trigger: TATGTACGGGGAGAAGTACAAGCCCTTTAAAGGCAT...TGGGCCTTGCTTTTCCTGTCTGAAGGTCCCATCAGAATCCCCAAGTGAGTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTCCGACAGCTGCCCAGTaGGAAGCTGGTCCCCCACAT | + |
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Preference number: 5 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFPTAAQ*EAGPPH Trigger: ATGTGGGGGACCAGCTTCCAACTGGGCAGCTGTCGG...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTTACACCACCACCACATaGTCTTTGATCACTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFYTTTT*SLITGS Trigger: CGAGCCAGTGATCAAAGACAATGTGGTGGTGGTGTA...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS-3UTR CAA 90 bp | AAATCTCAACTGCTCTTTCTTGGACTAACACCCATTTTTCTTCCGATCTTCTTTCTTCCTGTGATGGTGTaGACCACTGTCCGGAGAATA | + |
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Preference number: 5 (lower is better) Translates to: KSQLLFLGLTPIFLPIFFLPVMV*TTVRRI Trigger: TATTCTCCGGACAGTGGTCAACACCATCACAGGAAG...AAAGAAGATCGGAAGAAAAATGGGTGTTAGTCCAAGAAAGAGCAGTTGAGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CAA 90 bp | GGTGGGGATGACCGGAGGCACATTTTCTGCCTCGGTAGCTCTCTCTaGGGCCTCGAAGAAGTAATCACACACAGAGCGGCTGACCACACT | + |
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Preference number: 6 (lower is better) Translates to: GGDDRRHIFCLGSSL*GLEEVITHRAADHT Trigger: AGTGTGGTCAGCCGCTCTGTGTGTGATTACTTCTTCGAGGCCCAAGAGAGAGCTACCGAGGCAGAAAATGTGCCTCCGGTCATCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CAA 72 bp | GACCGGAGGCACATTTTCTGCCTCGGTAGCTCTCTCTaGGGCCTCGAAGAAGTAATCACACACAGAGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DRRHIFCLGSSL*GLEEVITHRAA Trigger: AGCCGCTCTGTGTGTGATTACTTCTTCGAGGCCCAAGAGAGAGCTACCGAGGCAGAAAATGTGCCTCCGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS TCA 72 bp | GATCACCCCTTGGATCTCAGCGGTGACTGTGGAACCTaGCTTGTCAATGATGGCGTCTATCTCTTCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: DHPLDLSGDCGT*LVNDGVYLFHH Trigger: GTGGTGGAAGAGATAGACGCCATCATTGACAAGTCAGGTTCCACAGTCACCGCTGAGATCCAAGGGGTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 72 bp | ATCGTAGGGTTCTCATCTGGTTTAGAAGCTCCGACCTaGAGACCCATCGTCCCCTTCAAACTTGGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: IVGFSSGLEAPT*RPIVPFKLGSF Trigger: GAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGAGCTTCTAAACCAGATGAGAACCCTACGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CAA 72 bp | ACCCCTTGGATCTCAGCGGTGACTGTGGAACCTGACTaGTCAATGATGGCGTCTATCTCTTCCACCACATCG | + |
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Preference number: 6 (lower is better) Translates to: TPWISAVTVEPD*SMMASISSTTS Trigger: CGATGTGGTGGAAGAGATAGACGCCATCATTGACAAGTCAGGTTCCACAGTCACCGCTGAGATCCAAGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS TCA 72 bp | AGCATCTTTGTCACGGGGTCAAACGTGTGTGTCCCCTaGGATGGAGTGAGGCTCATATTCAGGACTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SIFVTGSNVCVP*DGVRLIFRTPL Trigger: CAAAGGAGTCCTGAATATGAGCCTCACTCCATCTCAGGGGACACACACGTTTGACCCCGTGACAAAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 72 bp | GCTGTCCCGGAAGCTGATGCTATGTTTGACATAGACTaGAATGGCAACGAGGTTCTGTGCACTGACGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: AVPEADAMFDID*NGNEVLCTDVV Trigger: TACCACGTCAGTGCACAGAACCTCGTTGCCATTCCAGTCTATGTCAAACATAGCATCAGCTTCCGGGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 72 bp | AGCTCCGACCTGGAGACCCATCGTCCCCTTCAAACTTaGCAGCTTCTGTGGGTTTATTTTTCCTACATCCCA | + |
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Preference number: 6 (lower is better) Translates to: SSDLETHRPLQT*QLLWVYFSYIP Trigger: TGGGATGTAGGAAAAATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CAA 72 bp | AAGCTCCGACCTGGAGACCCATCGTCCCCTTCAAACTaGGCAGCTTCTGTGGGTTTATTTTTCCTACATCCC | + |
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Preference number: 6 (lower is better) Translates to: KLRPGDPSSPSN*AASVGLFFLHP Trigger: GGGATGTAGGAAAAATAAACCCACAGAAGCTGCCAAGTTTGAAGGGGACGATGGGTCTCCAGGTCGGAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS TCA 72 bp | CTTCCAACACCTCGTACACCACCACCACATTGTCTTTaGTCACTGGCTCGGAACAGACCCCAAAATAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPTPRTPPPHCL*SLARNRPQNSP Trigger: AGGACTATTTTGGGGTCTGTTCCGAGCCAGTGATCAAAGACAATGTGGTGGTGGTGTACGAGGTGTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS CCA 72 bp | GATCTTAAACTGCAGGTTAATCGTAGGGTTCTCATCTaGTTTAGAAGCTCCGACCTGGAGACCCATCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: DLKLQVNRRVLI*FRSSDLETHRP Trigger: GGGACGATGGGTCTCCAGGTCGGAGCTTCTAAACCAGATGAGAACCCTACGATTAACCTGCAGTTTAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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| CDS TCA 72 bp | CCTGAAATGTATCCACTACTCGGTGAAGGAATTCAATaGCAAACAGAGGCGGGACCTCTGTCTGGATTACAG | + |
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Preference number: 6 (lower is better) Translates to: PEMYPLLGEGIQ*QTEAGPLSGLQ Trigger: CTGTAATCCAGACAGAGGTCCCGCCTCTGTTTGTCATTGAATTCCTTCACCGAGTAGTGGATACATTTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163739.3 ENSMUST00000210656.2 |
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