Pregenerated sensors for AP3M1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021824Ensembl transcript IDs: ENSMUST00000022371.10, ENSMUST00000126536.8, ENSMUST00000130291.8, ENSMUST00000130370.3, ENSMUST00000154460.8, ENSMUST00000224016.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTGTAAACACACTGGTGCTCTGTCACTAGAGGAACAGAGTCACTaGGGTGTTATCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: SCKHTGALSLEEQSH*GVILPILPVGPLPD Trigger: ATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGATAACACCCCAGTGACTCTGTTCCTCTAGTGACAGAGCACCAGTGTGTTTACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR GCA 90 bp | GCAGCGAGTGCTGCGTTAGGGGCTATAGTAACAGGGCTCTCCTATTaGAGGCCACAGAGATGCTGGTTCATAATGCCCAGAACCTCATGC | + |
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Preference number: 1 (lower is better) Translates to: AASAALGAIVTGLSY*RPQRCWFIMPRTSC Trigger: GCATGAGGTTCTGGGCATTATGAACCAGCATCTCTGTGGCCTGCAATAGGAGAGCCCTGTTACTATAGCCCCTAACGCAGCACTCGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR GCA 90 bp | CTGAAGCTGCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTaGGCTGGGTCAGAAAGACTCCCTGGTACCAGTAGGCACCTCGTC | + |
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Preference number: 1 (lower is better) Translates to: LKLLQSKSEQMLALL*AGSERLPGTSRHLV Trigger: GACGAGGTGCCTACTGGTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | GCTGCACCTGACACATCACAGACTGAGACAGTTCCTGCTGGTAGATaGGACCAGTTGGCTTGCTTTAGGAGAGAGGATATCACTGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: AAPDTSQTETVPAGR*DQLACFRREDITVA Trigger: GGCTACAGTGATATCCTCTCTCCTAAAGCAAGCCAACTGGTCTCATCTACCAGCAGGAACTGTCTCAGTCTGTGATGTGTCAGGTGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | CTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGTGTGACACTTaGCTGCACCTGACACATCACAGACTGAGACAGTTCCTGCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: LGTDTEMAKIRRCDT*LHLTHHRLRQFLLV Trigger: TACCAGCAGGAACTGTCTCAGTCTGTGATGTGTCAGGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | GCTGCAGGAAAAAGTGGTCTCTGGAGAGTTCTAGCTTGTGCGGCCTaGATTCATTTCCTGCTTTCTCCCAGTGTAACCCTAGTTCCTCAC | + |
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Preference number: 1 (lower is better) Translates to: AAGKSGLWRVLACAA*IHFLLSPSVTLVPH Trigger: GTGAGGAACTAGGGTTACACTGGGAGAAAGCAGGAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | TGCCCAGAACCTCATGCAGTCTGTGAAGGAGACTGTGCGAGAGGCTaGAGCTGCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCT | + |
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Preference number: 1 (lower is better) Translates to: CPEPHAVCEGDCARG*SCFNQNPNRCWLYS Trigger: AGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTCCTTCACAGACTGCATGAGGTTCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | CCACAGAGATGCTGGTTCATAATGCCCAGAACCTCATGCAGTCTGTaGAGGAGACTGTGCGAGAGGCTGAAGCTGCTTCAATCAAAATCC | + |
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Preference number: 1 (lower is better) Translates to: PQRCWFIMPRTSCSL*RRLCERLKLLQSKS Trigger: GGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTCCTTCACAGACTGCATGAGGTTCTGGGCATTATGAACCAGCATCTCTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | ACCTTCTCTGGGCTGTGCATCATTGCTGCAGGAAAAAGTGGTCTCTaGAGAGTTCTAGCTTGTGCGGCCTGGATTCATTTCCTGCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: TFSGLCIIAAGKSGL*RVLACAAWIHFLLS Trigger: AGAAAGCAGGAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCACAGCCCAGAGAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | TCAGAAATCAGGAACCAGACGAATACAGGAGTGAGGCCTTCTTCCTaGATGTTCTTCCCACATCTAGTATGTCCAATCCCAACACTGAAC | + |
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Preference number: 1 (lower is better) Translates to: SEIRNQTNTGVRPSS*MFFPHLVCPIPTLN Trigger: GTTCAGTGTTGGGATTGGACATACTAGATGTGGGAAGAACATCCAGGAAGAAGGCCTCACTCCTGTATTCGTCTGGTTCCTGATTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | CTCTATAAACCCTGTACTTTCAGTTACTATGCGCACTCTCTCCCATaGATTTTACAGCAGCTCAGAATAAGCGTGAACACTAGCCGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LYKPCTFSYYAHSLP*ILQQLRISVNTSRK Trigger: CTTCCGGCTAGTGTTCACGCTTATTCTGAGCTGCTGTAAAATCCATGGGAGAGAGTGCGCATAGTAACTGAAAGTACAGGGTTTATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR GCA 90 bp | ATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGTaGTTTCTAGTGTCAGTGCTTACAGTACAAGGAGGCAAAAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: ILQVPSVLETHVHQM*FLVSVLTVQGGKRK Trigger: TTTCCTTTTGCCTCCTTGTACTGTAAGCACTGACACTAGAAAGCACATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | ATCTGGCTGGTACATACACCTCTGCTAAAGAGAAGAGAACCATCTTaGGTTCCAGAAGCCATTCAGAGTTGTCAGGAATGGAAACATCAA | + |
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Preference number: 1 (lower is better) Translates to: IWLVHTPLLKRREPS*VPEAIQSCQEWKHQ Trigger: TTGATGTTTCCATTCCTGACAACTCTGAATGGCTTCTGGAACTCAAGATGGTTCTCTTCTCTTTAGCAGAGGTGTATGTACCAGCCAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | ATGTATTCTTATACATTAGAAGGAGAAGAAATCACAAGTTACCAGTaGGCAAAGCAGCCAAATGTAGGTCACCTCCTGGCTAGAGACACC | + |
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Preference number: 1 (lower is better) Translates to: MYSYTLEGEEITSYQ*AKQPNVGHLLARDT Trigger: GGTGTCTCTAGCCAGGAGGTGACCTACATTTGGCTGCTTTGCCCACTGGTAACTTGTGATTTCTTCTCCTTCTAATGTATAAGAATACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | CAATGGCCTGGAGATATATGTAGTATGGAAAGGCGCTCCCCCAAATaGAGGGCACACAAGCAAATTCAACTATTTAAACACACAAAGATT | + |
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Preference number: 1 (lower is better) Translates to: QWPGDICSMERRSPK*RAHKQIQLFKHTKI Trigger: AATCTTTGTGTGTTTAAATAGTTGAATTTGCTTGTGTGCCCTTCATTTGGGGGAGCGCCTTTCCATACTACATATATCTCCAGGCCATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CCA 90 bp | GATTCATTTCCTGCTTTCTCCCAGTGTAACCCTAGTTCCTCACAATaGGAAACCAACTTTCACTGTTGTGAGGAAATCATTATTTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: DSFPAFSQCNPSSSQ*ETNFHCCEEIIISV Trigger: AACAGAAATAATGATTTCCTCACAACAGTGAAAGTTGGTTTCCCATTGTGAGGAACTAGGGTTACACTGGGAGAAAGCAGGAAATGAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR TCA 90 bp | AGAACCCTACATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTTaGCACAAATGCTGTATATTATTCCCACCCACTTGGTACCTAATA | + |
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Preference number: 1 (lower is better) Translates to: RTLHQLLSNFVSRVA*HKCCILFPPTWYLI Trigger: TATTAGGTACCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATGTAGGGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGGATCGGGTATAGGGCTTAACTGCAGCCCACTCCTGGCAGCGAGTGCTGCGAGCTGTAGTGCTCCCTaGCAGGGCCATGTGGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGSGIGLNCSPLLAASAASCSAP*QGHVEV Trigger: CACTTCCACATGGCCCTGGCAGGGAGCACTACAGCT...CGCAGCACTCGCTGCCAGGAGTGGGCTGCAGTTAAGCCCTATACCCGATCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCCCTATTAGATGGGGGCCACGGCGGCACTGCTGCTGCATCGTTGGCACGCAGTATAAATGGTTACTaGGGACTCTGTCCTTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: ASLLDGGHGGTAAASLARSINGY*GLCPSV Trigger: CACGGAAGGACAGAGTCCTCAGTAACCATTTATACT...GCGTGCCAACGATGCAGCAGCAGTGCCGCCGTGGCCCCCATCTAATAGGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGAGAAGGTGTGACACTTaGCTGCACCTGACACATCAC | + |
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Preference number: 2 (lower is better) Translates to: AVVLPARAMWKWLLLQCLRRCDT*LHLTHH Trigger: GTGATGTGTCAGGTGCAGCCAAGTGTCACACCTTCT...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGGTAAACTTCTTGGGGTaGGGCAATCTCCTCTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: AVVLPARAMWKWLLLQCLVNFLG*GNLLSW Trigger: CCAAGAGAGGAGATTGCCCCACCCCAAGAAGTTTAC...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGAAAGACTCCCTGGTACCAGTAGGCACCTCGTCAAATCTGGCTGGTACACCTGCCAGGGCCATGTaGAAGTGGCTTTTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: GQKDSLVPVGTSSNLAGTPARAM*KWLLLQ Trigger: CTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGG...TGTACCAGCCAGATTTGACGAGGTGCCTACTGGTACCAGGGAGTCTTTCTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CAA 90 bp | TCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTaGTCACTGCCAGTAGATGTCTGTGCTGAGGCCTTGGCATTCATT | + |
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Preference number: 2 (lower is better) Translates to: SCPSSQWGHSQIFYA*SLPVDVCAEALAFI Trigger: AATGAATGCCAAGGCCTCAGCACAGACATCTACTGGCAGTGACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTACTCTGCGCTGGGTCAGAAAGACTCCCTGGTACCAGTAGGCACCTCGTCCCTGCCTTGTTTGGTTaGCAAGGTAACCATCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ALLCAGSERLPGTSRHLVPALFG*QGNHPV Trigger: TACAGGATGGTTACCTTGGCAACCAAACAAGGCAGG...GACGAGGTGCCTACTGGTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGTGTAGCCTTCTGCTTTaGCTGTTAGAATGTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AVVLPARAMWKWLLLQCLCSLLL*LLECAA Trigger: TGCTGCACATTCTAACAGTCAAAGCAGAAGGCTACA...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTATCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTTGTACAGGAAGGAAGCTGTaGGGTCTAGGTATGGTCGTG | + |
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Preference number: 2 (lower is better) Translates to: CYPAHPPSGATPRFSMLCTGRKL*GLGMVV Trigger: CACGACCATACCTAGACCGCACAGCTTCCTTCCTGT...ACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGATAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGGATCGGGTATAGGGCTTAACTGCAGCCCACTCCTGGCAGCGAGTGCTGCGTTAAGAATTAGGGCTTaGTCCTTAAGAGACTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: GGSGIGLNCSPLLAASAALRIRA*SLRDLN Trigger: ATTCAAGTCTCTTAAGGAGCAAGCCCTAATTCTTAA...CGCAGCACTCGCTGCCAGGAGTGGGCTGCAGTTAAGCCCTATACCCGATCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGGCACAAGTGAAAAGCTaGGTAAGGCAAACACTTGAA | + |
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Preference number: 2 (lower is better) Translates to: AVVLPARAMWKWLLLQCLAQVKS*VRQTLE Trigger: TTCAAGTGTTTGCCTTACTCAGCTTTTCACTTGTGC...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTACTCTGCGCTGGGTCAGAAAGACTCCCTGGTACCAGTAGGCACCTCGTCGTCTACTTGAAGTTTTaGAACAGTTGGCCTCCCTAT | + |
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Preference number: 2 (lower is better) Translates to: ALLCAGSERLPGTSRHLVVYLKF*NSWPPY Trigger: ATAGGGAGGCCAACTGTTGCAAAACTTCAAGTAGAC...GACGAGGTGCCTACTGGTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTACATACACCTCTGCTAAAGAGAAGAGAACCATCTTGAGTTCCAGAAGCTGCCCATCCTCCCAGTaGGGCCACTCCCAGATTTTC | + |
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Preference number: 2 (lower is better) Translates to: AGTYTSAKEKRTILSSRSCPSSQ*GHSQIF Trigger: GAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCA...GCTTCTGGAACTCAAGATGGTTCTCTTCTCTTTAGCAGAGGTGTATGTACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CAA 90 bp | GTGCATCATTGCTGCAGGAAAAAGTGGTCTCTGGAGAGTTCTAGCTaGTGCGGCCTGGATTCATTTCCTGCTTTCTCCCAGTGTAACCCT | + |
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Preference number: 2 (lower is better) Translates to: VHHCCRKKWSLESSS*CGLDSFPAFSQCNP Trigger: AGGGTTACACTGGGAGAAAGCAGGAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTTAATTGTAGCCTTCTGCTTTaGCTGTTAGAATGTGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: VLPARAMWKWLLLQCLLNCSLLL*LLECAA Trigger: TGCTGCACATTCTAACAGTCAAAGCAGAAGGCTACA...ATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GACTCCCAGCGTTTGAATCGGATGCATGGGTGGAAGCTGACGTCATCTAGTAGCGCATCAATGACCCCTTaGATTTCTGCAAAGACTGTA | + |
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Preference number: 2 (lower is better) Translates to: DSQRLNRMHGWKLTSSSSASMTP*ISAKTV Trigger: TACAGTCTTTGCAGAAATTCAAGGGGTCATTGATGC...GCTACTAGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACGCTGGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGGAGGGACAAAGGATGACAAGGCAGCTAGGAAGGGCAAGCACTTTTGTCACAAGGATTTCCAAGTaGAAGATGCAGAATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GKEGQRMTRQLGRASTFVTRISK*KMQNGL Trigger: CAGGCCATTCTGCATCTTTCACTTGGAAATCCTTGT...GACAAAAGTGCTTGCCCTTCCTAGCTGCCTTGTCATCCTTTGTCCCTCCTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGACTCCCTGGTACTGGCTTTTGCTACAGTaGTTGCTTAATGGCACAAGT | + |
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Preference number: 2 (lower is better) Translates to: IRTDAGFTLRWVRKTPWYWLLLQ*LLNGTS Trigger: ACTTGTGCCATTAAGCAAGCACTGTAGCAAAAGCCA...GTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTATCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTTGTACAAACAGCTGTGCCTaGAGTAACTCGCTAACAACA | + |
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Preference number: 2 (lower is better) Translates to: CYPAHPPSGATPRFSMLCTNSCA*SNSLTT Trigger: TGTTGTTAGCGAGTTACTGCAGGCACAGCTGTTTGT...ACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | AAGATGCACAGGAAGGAAGCTGTGCGGTCTAGGTATGGTCGTGAGATAAAGGATAGAAGGTGTGACACTTaGCTGCACCTGACACATCAC | + |
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Preference number: 2 (lower is better) Translates to: KMHRKEAVRSRYGREIKDRRCDT*LHLTHH Trigger: GTGATGTGTCAGGTGCAGCCAAGTGTCACACCTTCT...ATCCTTTATCTCACGACCATACCTAGACCGCACAGCTTCCTTCCTGTGCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGACACTGAGATGGCTAAGATCAGAAGGTGTGACACTTGGCTGCACCTGGTTAGCAGGGTAGCTTaGCACAAATGCTGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: GTDTEMAKIRRCDTWLHLVSRVA*HKCCIL Trigger: TAATATACAGCATTTGTGTCAAGCTACCCTGCTAAC...CAGGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTCTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGGAGGGACAAAGGATGACAAGGCAGCTAGGAAGGGCAAGCACTTTTGTCCTAGTGGCACAAGATTaGTGGAATATTTACTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: GKEGQRMTRQLGRASTFVLVAQD*WNIYCS Trigger: GCTGCAGTAAATATTCCATCAATCTTGTGCCACTAG...GACAAAAGTGCTTGCCCTTCCTAGCTGCCTTGTCATCCTTTGTCCCTCCTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTCTGGAGACACATGTCCACCAGATGTGCTTTCTAGTGTCAGTGCTTACAGTAGACTTGGAAATCCCTaGAGCCTCTATTTGCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: SSGDTCPPDVLSSVSAYSRLGNP*SLYLLF Trigger: GAACAGCAAATAGAGGCTGCAGGGATTTCCAAGTCT...ACTGTAAGCACTGACACTAGAAAGCACATCTGGTGGACATGTGTCTCCAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGAATCATCCTAGGCTTTaGCAGTCTTCTTCTGTATGC | + |
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Preference number: 2 (lower is better) Translates to: ASIKIRTDAGFTLRWVRKNHPRL*QSSSVC Trigger: GCATACAGAAGAAGACTGCCAAAGCCTAGGATGATT...CTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CAA 90 bp | GCTAAAGAGAAGAGAACCATCTTGAGTTCCAGAAGCCATTCAGAGTaGTCAGGAATGGAAACATCAATCCCTGGCTTCACACACCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: AKEKRTILSSRSHSE*SGMETSIPGFTHQK Trigger: TTTCTGGTGTGTGAAGCCAGGGATTGATGTTTCCATTCCTGACAACTCTGAATGGCTTCTGGAACTCAAGATGGTTCTCTTCTCTTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR-3UTR CCA 90 bp | GAGACTGTGCGAGAGGCTGAAGCTGCTTCAATCAAAATCCGAACAGATGCTGGCTTTTTGCATTTATCCTaGCTGTATAAGCATTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ETVREAEAASIKIRTDAGFLHLS*LYKHFP Trigger: TGGGAAATGCTTATACAGCCAGGATAAATGCAAAAA...GCCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CAA 90 bp | AGGCAGCTAGGAAGGGCAAGCACTTTTGTCTTCCTCCATTTTCTTTaGTCATTGAACAAGGATTTCCAAGTGAAAGATGCAGAATGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RQLGRASTFVFLHFL*SLNKDFQVKDAEWP Trigger: AGGCCATTCTGCATCTTTCACTTGGAAATCCTTGTTCAATGACAAAAGAAAATGGAGGAAGACAAAAGTGCTTGCCCTTCCTAGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| 3UTR CAA 90 bp | AATCTGGCTGGTACATACACCTCTGCTAAAGAGAAGAGAACCATCTaGAGTTCCAGAAGCCATTCAGAGTTGTCAGGAATGGAAACATCA | + |
|
Preference number: 2 (lower is better) Translates to: NLAGTYTSAKEKRTI*SSRSHSELSGMETS Trigger: TGATGTTTCCATTCCTGACAACTCTGAATGGCTTCTGGAACTCAAGATGGTTCTCTTCTCTTTAGCAGAGGTGTATGTACCAGCCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGAAAAAGCTGAAGTTGTaGAATGTGAGGGACACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ASIKIRTDAGFTLRWVRKKKLKL*NVRDTF Trigger: AAAAGTGTCCCTCACATTTCACAACTTCAGCTTTTT...CTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CAA 90 bp | AGAATTAGGGCTTGCTCCTTAAGAGACTTGAATGGAAAGGCAATCTaGTCTGGGAGACTAGCATTTGCAGATTATACTTCTGGTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RIRACSLRDLNGKAI*SGRLAFADYTSGAS Trigger: AGAAGCACCAGAAGTATAATCTGCAAATGCTAGTCTCCCAGACAAGATTGCCTTTCCATTCAAGTCTCTTAAGGAGCAAGCCCTAATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGTGCTTTCCAAGAAAAGTCTACTTaGAGTTTTGCAACAGTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: LFSKFLQFWRHMSTRCAFQEKST*SFATVG Trigger: GCCAACTGTTGCAAAACTTCAAGTAGACTTTTCTTG...GAAAGCACATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CCA 90 bp | TTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGTGCTTTCGATACTGGGTTTTCCTaGGTCTATATTGAAGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LFSKFLQFWRHMSTRCAFDTGFS*VYIEVV Trigger: TACCACTTCAATATAGACCCAGGAAAACCCAGTATC...GAAAGCACATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGTTTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGATCACAAGTTACCAGTaGGCAAAGCAGCCAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: IMFILQVPSVLETHVHQMITSYQ*AKQPNV Trigger: TACATTTGGCTGCTTTGCCCACTGGTAACTTGTGAT...CATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAAACATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR TCA 90 bp | TTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGTGCTTTCTCTGTTACCAGAAGATaGATGGTTGTAAATATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LFSKFLQFWRHMSTRCAFSVTRR*MVVNML Trigger: GAGCATATTTACAACCATTCATCTTCTGGTAACAGA...GAAAGCACATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGATATGAGTCGGAAATTTCCATCTGGAGGAATGAATGACAAAACTCTTTCAAATCGGATGCATGGGTaGAAGCTGACGTCATCTAGT | + |
|
Preference number: 2 (lower is better) Translates to: YDMSRKFPSGGMNDKTLSNRMHG*KLTSSS Trigger: ACTAGATGACGTCAGCTTCCACCCATGCATCCGATT...TGAAAGAGTTTTGTCATTCATTCCTCCAGATGGAAATTTCCGACTCATATCGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATGTTTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGCTAATTCTCAAGGTCTaGAAACCAACAGCTTTATTC | + |
|
Preference number: 2 (lower is better) Translates to: IMFILQVPSVLETHVHQMLILKV*KPTALF Trigger: GAATAAAGCTGTTGGTTTCCAGACCTTGAGAATTAG...CATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAAACATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTATTGAAGCTAATTCTCAAGGTCTGGAAACCAACAGCTTTATTCAATCCATAAAGGTGTCATCACAATaGCCTGGAGATATATGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: CIEANSQGLETNSFIQSIKVSSQ*PGDICS Trigger: ACTACATATATCTCCAGGCCATTGTGATGACACCTT...TATGGATTGAATAAAGCTGTTGGTTTCCAGACCTTGAGAATTAGCTTCAATACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | ACTGGTGGAGCAGGGGGATCGGGTATAGGGCTTAACTaGAGCCCACTCCTGGCAGCGAGTGCTGCGTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: TGGAGGSGIGLN*SPLLAASAALG Trigger: CCCTAACGCAGCACTCGCTGCCAGGAGTGGGCTGCAGTTAAGCCCTATACCCGATCCCCCTGCTCCACCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | CACACTGGTGCTCTGTCACTAGAGGAACAGAGTCACTaGGGTGTTATCCTGCCCATCCTCCCAGTGGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HTGALSLEEQSH*GVILPILPVGP Trigger: TGGCCCCACTGGGAGGATGGGCAGGATAACACCCCAGTGACTCTGTTCCTCTAGTGACAGAGCACCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | GAGCACGGAGCTGTAGTGCTCCCTGCCAGGGCCATGTaGAAGTGGCTTTTGCTACAGTGCTTGCTTAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: EHGAVVLPARAM*KWLLLQCLLNG Trigger: GCCATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGCTCCGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | CAGCTCAGAATAAGCGTGAACACTAGCCGGAAGCCCTaGTCTGCCCCGGGGGTCATTTCTGTGTTTACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: QLRISVNTSRKP*SAPGVISVFTV Trigger: AACCGTAAACACAGAAATGACCCCCGGGGCAGAGCAGGGCTTCCGGCTAGTGTTCACGCTTATTCTGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | GCTGACCCTGCCTACCTTCTCTGGGCTGTGCATCATTaGTGCAGGAAAAAGTGGTCTCTGGAGAGTTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ADPAYLLWAVHH*CRKKWSLESSS Trigger: GCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCACAGCCCAGAGAAGGTAGGCAGGGTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | GTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATaGCTAAGATCAGAAGGTGTGACACTTGGCTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VGQSPLLGQTLR*LRSEGVTLGCT Trigger: GGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTATCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTTGTGTCTGTGCTGAGGCCTaGGCATTCATTCTTCGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CYPAHPPSGATPRFSMLCVCAEA*AFILRP Trigger: AGGGCGAAGAATGAATGCCAAGGCCTCAGCACAGAC...ACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGATAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | GACCCTGCCTACCTTCTCTGGGCTGTGCATCATTGCTaGAGGAAAAAGTGGTCTCTGGAGAGTTCTAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DPAYLLWAVHHC*RKKWSLESSSL Trigger: CAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCACAGCCCAGAGAAGGTAGGCAGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | CTTCTCTGGGCTGTGCATCATTGCTGCAGGAAAAAGTaGTCTCTGGAGAGTTCTAGCTTGTGCGGCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LLWAVHHCCRKK*SLESSSLCGLD Trigger: ATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCACAGCCCAGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | CCTCATGCAGTCTGTGAAGGAGACTGTGCGAGAGGCTaGAGCTGCTTCAATCAAAATCCGAACAGATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PHAVCEGDCARG*SCFNQNPNRCW Trigger: CCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTCCTTCACAGACTGCATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | TGCTGGTTCATAATGCCCAGAACCTCATGCAGTCTGTaGAGGAGACTGTGCGAGAGGCTGAAGCTGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: CWFIMPRTSCSL*RRLCERLKLLQ Trigger: TTGAAGCAGCTTCAGCCTCTCGCACAGTCTCCTTCACAGACTGCATGAGGTTCTGGGCATTATGAACCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | CTTTCAGACTCCCAGCGTTTGAATCGGATGCATGGGTaGAAGCTGACGTCATCTAGTAGCCTTGGGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LSDSQRLNRMHG*KLTSSSSLGFM Trigger: CATGAACCCAAGGCTACTAGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACGCTGGGAGTCTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| 3UTR CCA 72 bp | GGGCTGTGCATCATTGCTGCAGGAAAAAGTGGTCTCTaGAGAGTTCTAGCTTGTGCGGCCTGGATTCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GLCIIAAGKSGL*RVLACAAWIHF Trigger: GAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCAATGATGCACAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | CTTACAGAATGGATGGCAGCCTGTGTTCACGGCTGCTaGATAGACTTGGAAATCCCTGCAGCCTCTATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LTEWMAACVHGC*IDLEIPAASIC Trigger: GCAAATAGAGGCTGCAGGGATTTCCAAGTCTATTCAGCAGCCGTGAACACAGGCTGCCATCCATTCTGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | CCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTaGTTGCTTAATGGCACAAGTGAAAAGCTGAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PARAMWKWLLLQ*LLNGTSEKLSK Trigger: CTTACTCAGCTTTTCACTTGTGCCATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | CTGTGTTCACGGCTGCTGAATAGACTTGGAAATCCCTaGAGCCTCTATTTGCTGTTCACCTTGTTCACCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LCSRLLNRLGNP*SLYLLFTLFTG Trigger: TCCGGTGAACAAGGTGAACAGCAAATAGAGGCTGCAGGGATTTCCAAGTCTATTCAGCAGCCGTGAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | CTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTaGGCTGGGTCAGAAAGACTCCCTGGTACCAGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQSKSEQMLALL*AGSERLPGTSR Trigger: CCTACTGGTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | ATAGTAACAGGGCTCTCCTATTGCAGGCCACAGAGATaGTGGTTCATAATGCCCAGAACCTCATGCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IVTGLSYCRPQR*WFIMPRTSCSL Trigger: CAGACTGCATGAGGTTCTGGGCATTATGAACCAGCATCTCTGTGGCCTGCAATAGGAGAGCCCTGTTACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | GACACTGAGATGGCTAAGATCAGAAGGTGTGACACTTaGCTGCACCTGACACATCACAGACTGAGACAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: DTEMAKIRRCDT*LHLTHHRLRQF Trigger: GAACTGTCTCAGTCTGTGATGTGTCAGGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | GACACATCACAGACTGAGACAGTTCCTGCTGGTAGATaGGACCAGTTGGCTTGCTTTAGGAGAGAGGATATC | + |
|
Preference number: 3 (lower is better) Translates to: DTSQTETVPAGR*DQLACFRREDI Trigger: GATATCCTCTCTCCTAAAGCAAGCCAACTGGTCTCATCTACCAGCAGGAACTGTCTCAGTCTGTGATGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | GTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGTaGTTTCTAGTGTCAGTGCTTACAGTACAAGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VPSVLETHVHQM*FLVSVLTVQGG Trigger: GCCTCCTTGTACTGTAAGCACTGACACTAGAAAGCACATCTGGTGGACATGTGTCTCCAGAACTGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR GCA 72 bp | TGGAAACTTCCTGTCTCACATCCTGCCTTGTTTGGTTaGCAAGGTAACCATCCTGTAAACACACTGGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WKLPVSHPALFG*QGNHPVNTLVL Trigger: GAGCACCAGTGTGTTTACAGGATGGTTACCTTGGCAACCAAACAAGGCAGGATGTGAGACAGGAAGTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | AGGAACCAGACGAATACAGGAGTGAGGCCTTCTTCCTaGATGTTCTTCCCACATCTAGTATGTCCAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RNQTNTGVRPSS*MFFPHLVCPIP Trigger: TGGGATTGGACATACTAGATGTGGGAAGAACATCCAGGAAGAAGGCCTCACTCCTGTATTCGTCTGGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | AAAAGTGGTCTCTGGAGAGTTCTAGCTTGTGCGGCCTaGATTCATTTCCTGCTTTCTCCCAGTGTAACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KSGLWRVLACAA*IHFLLSPSVTL Trigger: TAGGGTTACACTGGGAGAAAGCAGGAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGAAAAACAAACTGATCTaGAGCAAGTTTGGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GGAISSLGTDTEMAKIRRKNKLI*SKFGLF Trigger: GAAGAGGCCAAACTTGCTCAAGATCAGTTTGTTTTT...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGTATTTGCTGTTCACCTaGTTCACCGGAACTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASIKIRTDAGFTLRWVRKYLLFT*FTGTVC Trigger: GCACACAGTTCCGGTGAACAAGGTGAACAGCAAATA...CTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCTTTCCCCACTATAGGCTCTCAAGACCTAGAGCTGAGGCAAGTCTAAATGTGCTTCACTCGAATTaGATAGGAGTTTGGAGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPFPHYRLSRPRAEASLNVLHSN*IGVWRR Trigger: CCTTCTCCAAACTCCTATCAAATTCGAGTGAAGCAC...ATTTAGACTTGCCTCAGCTCTAGGTCTTGAGAGCCTATAGTGGGGAAAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | GAACAAGGATTTCCAAGTGAAAGATGCAGAATGGCCTaGGTCACAGACTGGCTTTTCAGGAGTAAAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: EQGFPSERCRMA*VTDWLFRSKDQ Trigger: TTGGTCTTTACTCCTGAAAAGCCAGTCTGTGACTCAGGCCATTCTGCATCTTTCACTTGGAAATCCTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | GTACATACACCTCTGCTAAAGAGAAGAGAACCATCTTaGGTTCCAGAAGCCATTCAGAGTTGTCAGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: VHTPLLKRREPS*VPEAIQSCQEW Trigger: CCATTCCTGACAACTCTGAATGGCTTCTGGAACTCAAGATGGTTCTCTTCTCTTTAGCAGAGGTGTATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | TATACATTAGAAGGAGAAGAAATCACAAGTTACCAGTaGGCAAAGCAGCCAAATGTAGGTCACCTCCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: YTLEGEEITSYQ*AKQPNVGHLLA Trigger: AGCCAGGAGGTGACCTACATTTGGCTGCTTTGCCCACTGGTAACTTGTGATTTCTTCTCCTTCTAATGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTATTGAAGCTAATTCTCAAGGTCTGGAAACCAACAGCTTTATTCAATCCATAGGGCAATCTCCTCTCTaGGGACAGACACTGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: CIEANSQGLETNSFIQSIGQSPL*GQTLRW Trigger: CCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCC...TATGGATTGAATAAAGCTGTTGGTTTCCAGACCTTGAGAATTAGCTTCAATACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCATGTTTATTCTCCAAGTTCCTTCAGTTCTGGAGACACATGTCCACCAGATGGACATAGTCCTCCTCTaGTTTGAGGAAACACTGACT | + |
|
Preference number: 3 (lower is better) Translates to: IMFILQVPSVLETHVHQMDIVLL*FEETLT Trigger: AGTCAGTGTTTCCTCAAACAAGAGGAGGACTATGTC...CATCTGGTGGACATGTGTCTCCAGAACTGAAGGAACTTGGAGAATAAACATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CCA 72 bp | TCATTGAACAAGGATTTCCAAGTGAAAGATGCAGAATaGCCTGAGTCACAGACTGGCTTTTCAGGAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SLNKDFQVKDAE*PESQTGFSGVK Trigger: CTTTACTCCTGAAAAGCCAGTCTGTGACTCAGGCCATTCTGCATCTTTCACTTGGAAATCCTTGTTCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | GGAGATATATGTAGTATGGAAAGGCGCTCCCCCAAATaGAGGGCACACAAGCAAATTCAACTATTTAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GDICSMERRSPK*RAHKQIQLFKH Trigger: GTGTTTAAATAGTTGAATTTGCTTGTGTGCCCTTCATTTGGGGGAGCGCCTTTCCATACTACATATATCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATTCTTATACATTAGAAGGAGAAGAAATCACAAGTTACCAGTGGGCAAAGGAAGTTTTGCAACAGTaGGCCTCCCTATTAGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: MYSYTLEGEEITSYQWAKEVLQQ*ASLLDG Trigger: CCCATCTAATAGGGAGGCCAACTGTTGCAAAACTTC...CTTTGCCCACTGGTAACTTGTGATTTCTTCTCCTTCTAATGTATAAGAATACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | CATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTTaGCACAAATGCTGTATATTATTCCCACCCACTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HQLLSNFVSRVA*HKCCILFPPTW Trigger: CCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR TCA 72 bp | GTCAATCTGAGATTCGTTACTCAAGAAAAGTCTACTTaGAGTTTTGCAACAGTTGGCCTCCCTATTAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VNLRFVTQEKST*SFATVGLPIRW Trigger: CCATCTAATAGGGAGGCCAACTGTTGCAAAACTTCAAGTAGACTTTTCTTGAGTAACGAATCTCAGATTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCCTTAGCTTAAAGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTAAAAACAAACTGATCTaGAGCAAGTTTGGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TFLSLKLRKNPTSITKQLKNKLI*SKFGLF Trigger: GAAGAGGCCAAACTTGCTCAAGATCAGTTTGTTTTT...AAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCTTTAAGCTAAGGAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTATTCTTATACATTAGAAGGAGAAGAAATCACAAGTTACCAGTGGGCAAAGACTAGTGGCACAAGATaGATGGAATATTTACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: MYSYTLEGEEITSYQWAKTSGTR*MEYLLQ Trigger: CTGCAGTAAATATTCCATCAATCTTGTGCCACTAGT...CTTTGCCCACTGGTAACTTGTGATTTCTTCTCCTTCTAATGTATAAGAATACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCCTATTAGATGGGGGCCACGGCGGCACTGCTGCTGCATCGTTGGCACGCTGTGTACTTCACTCCTaGTCGACGCCATGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ASLLDGGHGGTAAASLARCVLHS*STPWDV Trigger: AACATCCCATGGCGTCGAGCAGGAGTGAAGTACACA...GCGTGCCAACGATGCAGCAGCAGTGCCGCCGTGGCCCCCATCTAATAGGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCCCTATTAGATGGGGGCCACGGCGGCACTGCTGCTGCATCGTTGGCACGCCTTAATTGCAGCCTCTaGACACTCACCAAAGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLDGGHGGTAAASLARLNCSL*TLTKVV Trigger: GACTACTTTGGTGAGTGTTCAGAGGCTGCAATTAAG...GCGTGCCAACGATGCAGCAGCAGTGCCGCCGTGGCCCCCATCTAATAGGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCACGGAGCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTGGTTCTCTTCTGGCTTaGGTGCTCCTGACTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GARSCSAPCQGHVEVAFAGSLLA*VLLTVN Trigger: ATTTACAGTCAGGAGCACCCAAGCCAGAAGAGAACC...AGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGCTCCGTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGGTAGCCTTGGGTTCATaGAAGAGAGGGAGAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVLPARAMWKWLLLQCLVALGS*KRGRDQ Trigger: CTGATCTCTCCCTCTCTTTCATGAACCCAAGGCTAC...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GGGACAGACACTGAGATGGCTAAGATCAGAAGGTGTGACACTTGGCTGCACCTGGGGATGTTGGATAGCTaGCCAGTGGGGAGTGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GTDTEMAKIRRCDTWLHLGMLDS*PVGSVS Trigger: GGATACACTCCCCACTGGGCAGCTATCCAACATCCC...CAGGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTCTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | TCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTaGTCACTGCCAGTAGATGTCTGTGCTGAGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSQWGHSQIFYA*SLPVDVCAEAL Trigger: CAAGGCCTCAGCACAGACATCTACTGGCAGTGACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCACGGAGCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTAATTACAAAGAGAGGTaGCACTTCGGTCTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GARSCSAPCQGHVEVAFANYKER*HFGLYH Trigger: GTGATACAGACCGAAGTGCCACCTCTCTTTGTAATT...AGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGCTCCGTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | CTTGGAAATCCCTGCAGCCTCTATTTGCTGTTCACCTaGTTCACCGGAACTGTGTGCCGCAGACTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGNPCSLYLLFT*FTGTVCRRLCS Trigger: ACTGCAGAGTCTGCGGCACACAGTTCCGGTGAACAAGGTGAACAGCAAATAGAGGCTGCAGGGATTTCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGACAACTTTGGGCATGTaGACAGTCACTGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVVLPARAMWKWLLLQCLTTLGM*TVTVIP Trigger: AGGAATCACAGTGACTGTTCACATGCCCAAAGTTGT...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GGGACAGACACTGAGATGGCTAAGATCAGAAGGTGTGACACTTGGCTGCACCTGTGTGTACTTCACTCCTaGTCGACGCCATGGGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTDTEMAKIRRCDTWLHLCVLHS*STPWDV Trigger: AACATCCCATGGCGTCGAGCAGGAGTGAAGTACACA...CAGGTGCAGCCAAGTGTCACACCTTCTGATCTTAGCCATCTCAGTGTCTGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | TGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTCTGTATGTTGAGGTTTaGGTTCTCTTCTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CSAPCQGHVEVAFATVLALYVEV*VLFWLG Trigger: CCCAAGCCAGAAGAGAACCCAAACCTCAACATACAG...AGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | TGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTCGCCAGAGCAGTTTATaGGAAATAGACTGTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: CSAPCQGHVEVAFATVLARQSSL*EIDCGS Trigger: TGATCCACAGTCTATTTCTCATAAACTGCTCTGGCG...AGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GGGACAAAGGATGACAAGGCAGCTAGGAAGGGCAAGCACTTTTGTCTTCCTCCAGTAGCCTTGGGTTCATaGAAGAGAGGGAGAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTKDDKAARKGKHFCLPPVALGS*KRGRDQ Trigger: CTGATCTCTCCCTCTCTTTCATGAACCCAAGGCTAC...TGGAGGAAGACAAAAGTGCTTGCCCTTCCTAGCTGCCTTGTCATCCTTTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCCCCAACATTACTACTaGCAAAGTAGTCCTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVLPARAMWKWLLLQCLPQHYY*QSSPEK Trigger: CTTTTCAGGACTACTTTGGCAGTAGTAATGTTGGGG...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022371.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGGGTTCTCTTCTGGCTTaGGTGCTCCTGACTGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GGAISSLGTDTEMAKIRRGSLLA*VLLTVN Trigger: ATTTACAGTCAGGAGCACCCAAGCCAGAAGAGAACC...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | CTGCTGAATAGACTTGGAAATCCCTGCAGCCTCTATTaGCTGTTCACCTTGTTCACCGGAACTGTGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNRLGNPCSLY*LFTLFTGTVCR Trigger: GCGGCACACAGTTCCGGTGAACAAGGTGAACAGCAAATAGAGGCTGCAGGGATTTCCAAGTCTATTCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | TGCTGCAGGAAAAAGTGGTCTCTGGAGAGTTCTAGCTaGTGCGGCCTGGATTCATTTCCTGCTTTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CCRKKWSLESSS*CGLDSFPAFSQ Trigger: CTGGGAGAAAGCAGGAAATGAATCCAGGCCGCACAAGCTAGAACTCTCCAGAGACCACTTTTTCCTGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGGAAATAGTCACACACTaGCTGGCTTACAACGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GGAISSLGTDTEMAKIRREIVTH*LAYNAL Trigger: AAGAGCGTTGTAAGCCAGTCAGTGTGTGACTATTTC...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGTTCCATCTGGAGGAATaGATGACAAAACTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVVLPARAMWKWLLLQCLFHLEE*MTKLFQ Trigger: CTGAAAGAGTTTTGTCATTCATTCCTCCAGATGGAA...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGAAAGACTCCCTGGTACCAGTAGGCACCTCGTCAAATCTGGCTGGTACAGATCAAATGTATAGCTaGCTTGCGTTGGTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GQKDSLVPVGTSSNLAGTDQMYS*LALVSG Trigger: ACCTGACACCAACGCAAGGCAGCTATACATTTGATC...TGTACCAGCCAGATTTGACGAGGTGCCTACTGGTACCAGGGAGTCTTTCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | TGTTATCCTGCCCATCCTCCCAGTGGGGCCACTCCCAGATTTTCTATGCTTTGTAATCGGATGCATGGGTaGAAGCTGACGTCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CYPAHPPSGATPRFSMLCNRMHG*KLTSSS Trigger: ACTAGATGACGTCAGCTTCCACCCATGCATCCGATT...ACAAAGCATAGAAAATCTGGGAGTGGCCCCACTGGGAGGATGGGCAGGATAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | GCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTaGCTTAATGGCACAAGTGAAAAGCTGAGTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARAMWKWLLLQC*LNGTSEKLSKA Trigger: TGCCTTACTCAGCTTTTCACTTGTGCCATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCAGACTCCCAGCGTTTGAATCGGATGCATGGGTGGAAGCTGACGTCATCTCGCCAGAGCAGTTTATaGGAAATAGACTGTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LSDSQRLNRMHGWKLTSSRQSSL*EIDCGS Trigger: TGATCCACAGTCTATTTCTCATAAACTGCTCTGGCG...AGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACGCTGGGAGTCTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGGCATCAATGACCCCTTaGATTTCTGCAAAGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGAISSLGTDTEMAKIRRASMTP*ISAKTV Trigger: TACAGTCTTTGCAGAAATTCAAGGGGTCATTGATGC...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTTAATCCTGAAATAGCAAGCTaGTGGATCTTGAACTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: VLPARAMWKWLLLQCLLNPEIAS*WILNCM Trigger: CATACAGTTCAAGATCCAGCAGCTTGCTATTTCAGG...ATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | ATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGACTCCCTGGTACCCTGAAATAGCAAGCTaGTGGATCTTGAACTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: IRTDAGFTLRWVRKTPWYPEIAS*WILNCM Trigger: CATACAGTTCAAGATCCAGCAGCTTGCTATTTCAGG...GTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGAATTACAAAGAGAGGTaGCACTTCGGTCTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGAISSLGTDTEMAKIRRNYKER*HFGLYH Trigger: GTGATACAGACCGAAGTGCCACCTCTCTTTGTAATT...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTTAATTATTCAGCACAACTTTaGGCATGTGAACAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPARAMWKWLLLQCLLNYSAQL*ACEQSL Trigger: CAGTGACTGTTCACATGCCCAAAGTTGTGCTGAATA...ATTAAGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | CTGACACATCACAGACTGAGACAGTTCCTGCTGGTAGATGAGACCAGTTGGCTTCGCCAGAGCAGTTTATaGGAAATAGACTGTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTHHRLRQFLLVDETSWLRQSSL*EIDCGS Trigger: TGATCCACAGTCTATTTCTCATAAACTGCTCTGGCG...AAGCCAACTGGTCTCATCTACCAGCAGGAACTGTCTCAGTCTGTGATGTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAGAGATCAGGCATTCCAGACAGCTTAATGCAAGCATCAATGACCCCTGAAATAGTCACACACTaGCTGGCTTACAACGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERERSGIPDSLMQASMTPEIVTH*LAYNAL Trigger: AAGAGCGTTGTAAGCCAGTCAGTGTGTGACTATTTC...AGGGGTCATTGATGCTTGCATTAAGCTGTCTGGAATGCCTGATCTCTCCCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAGACTCCCAGCGTTTGAATCGGATGCATGGGTGGAAGCTGACGTCATCTAATTACAAAGAGAGGTaGCACTTCGGTCTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSDSQRLNRMHGWKLTSSNYKER*HFGLYH Trigger: GTGATACAGACCGAAGTGCCACCTCTCTTTGTAATT...AGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACGCTGGGAGTCTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGCACAGGAAGGAAGCTGTGCGGTCTAGGTATGGTCGTGAGATAAAGGATACAACTTTGGGCATGTaGACAGTCACTGTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMHRKEAVRSRYGREIKDTTLGM*TVTVIP Trigger: AGGAATCACAGTGACTGTTCACATGCCCAAAGTTGT...ATCCTTTATCTCACGACCATACCTAGACCGCACAGCTTCCTTCCTGTGCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGGAGAGATCAGGCATTCCAGACAGCTTAATGCAAGCATCAATGACCCCTAACATTACTACTGCCTaGAAAGTGTCAGCAACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ERERSGIPDSLMQASMTPNITTA*KVSATR Trigger: TCGAGTTGCTGACACTTTTCAGGCAGTAGTAATGTT...AGGGGTCATTGATGCTTGCATTAAGCTGTCTGGAATGCCTGATCTCTCCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGGTGTCAGCAACTCGATaGAGAAATTCAATTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAISSLGTDTEMAKIRRVSATR*RNSITK Trigger: CTTTGTAATTGAATTTCTGCATCGAGTTGCTGACAC...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | CTGACACATCACAGACTGAGACAGTTCCTGCTGGTAGATGAGACCAGTTGGCTTTATTCAGCACAACTTTaGGCATGTGAACAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LTHHRLRQFLLVDETSWLYSAQL*ACEQSL Trigger: CAGTGACTGTTCACATGCCCAAAGTTGTGCTGAATA...AAGCCAACTGGTCTCATCTACCAGCAGGAACTGTCTCAGTCTGTGATGTGTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCAATCAAAATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGCCCATGCTAGTACCTTaGTCACGGGATCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ASIKIRTDAGFTLRWVRKPMLVP*SRDQMY Trigger: ATACATTTGATCCCGTGACCAAGGTACTAGCATGGG...CTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGATTTTGATTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGCACAGGAAGGAAGCTGTGCGGTCTAGGTATGGTCGTGAGATAAAGGATGCATCAATGACCCCTTaGATTTCTGCAAAGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KMHRKEAVRSRYGREIKDASMTP*ISAKTV Trigger: TACAGTCTTTGCAGAAATTCAAGGGGTCATTGATGC...ATCCTTTATCTCACGACCATACCTAGACCGCACAGCTTCCTTCCTGTGCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | CGTTTGAATCGGATGCATGGGTGGAAGCTGACGTCATCTAGTAGCCTTGGGTTCGTGTCAGCAACTCGATaGAGAAATTCAATTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLNRMHGWKLTSSSSLGFVSATR*RNSITK Trigger: CTTTGTAATTGAATTTCTGCATCGAGTTGCTGACAC...GAACCCAAGGCTACTAGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGCAGCATTCAGCTGGTAGCCCCCATGGAAGAAATCATCTAAACCTTTTCCTGTATGTTGAGGTTTaGGTTCTCTTCTGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NVQHSAGSPHGRNHLNLFLYVEV*VLFWLG Trigger: CCCAAGCCAGAAGAGAACCCAAACCTCAACATACAG...GAAAAGGTTTAGATGATTTCTTCCATGGGGGCTACCAGCTGAATGCTGCACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGGCATTCCAGACAGCTTAATGCAAGCATCAATGACCCCTTGAATTTCTGCGGTGAGGTGTTGAAATaGCAGGTGGGACATTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IRHSRQLNASINDPLNFCGEVLK*QVGHFQ Trigger: TTGAAAATGTCCCACCTGTCATTTCAACACCTCACC...GCAGAAATTCAAGGGGTCATTGATGCTTGCATTAAGCTGTCTGGAATGCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGCAGCATTCAGCTGGTAGCCCCCATGGAAGAAATCATCTAAACCTTTTCGGTGAGGTGTTGAAATaGCAGGTGGGACATTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVQHSAGSPHGRNHLNLFGEVLK*QVGHFQ Trigger: TTGAAAATGTCCCACCTGTCATTTCAACACCTCACC...GAAAAGGTTTAGATGATTTCTTCCATGGGGGCTACCAGCTGAATGCTGCACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | AATGTGCAGCATTCAGCTGGTAGCCCCCATGGAAGAAATCATCTAAACCTTTTCCCCATGCTAGTACCTTaGTCACGGGATCAAATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NVQHSAGSPHGRNHLNLFPMLVP*SRDQMY Trigger: ATACATTTGATCCCGTGACCAAGGTACTAGCATGGG...GAAAAGGTTTAGATGATTTCTTCCATGGGGGCTACCAGCTGAATGCTGCACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | AAAGCTGAAGTTGTGAAATGTGAGGGACACTTTTGTTaGTTCCCAACCCCAGTACATAGCTATGGGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAEVVKCEGHFC*FPTPVHSYGCE Trigger: CTCACACCCATAGCTATGTACTGGGGTTGGGAACAAACAAAAGTGTCCCTCACATTTCACAACTTCAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | AGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTGGTGAGGTGTTGAAATaGCAGGTGGGACATTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVRTLHQLLSNFVSRVAGEVLK*QVGHFQ Trigger: TTGAAAATGTCCCACCTGTCATTTCAACACCTCACC...AGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTTGACACAAATGCTGTATATTATTCCCACCCACTTGGTACCTAATAGTAATCGGATGCATGGGTaGAAGCTGACGTCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLTQMLYIIPTHLVPNSNRMHG*KLTSSS Trigger: ACTAGATGACGTCAGCTTCCACCCATGCATCCGATT...ACTATTAGGTACCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | CATTCAGCTGGTAGCCCCCATGGAAGAAATCATCTAAACCTTTTCCTAAGTGAAATAGCTGCCTTGCGTTaGTGTCAGGTTCATATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGSPHGRNHLNLFLSEIAALR*CQVHIQ Trigger: CTGAATATGAACCTGACACCAACGCAAGGCAGCTAT...TTCACTTAGGAAAAGGTTTAGATGATTTCTTCCATGGGGGCTACCAGCTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | TATGTGTTATGGAAACTTCCTGTCTCACATCCTGCCTaGTTTGGTTGCCAAGGTAACCATCCTGTAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: YVLWKLPVSHPA*FGCQGNHPVNT Trigger: TGTGTTTACAGGATGGTTACCTTGGCAACCAAACAAGGCAGGATGTGAGACAGGAAGTTTCCATAACACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTTGACACAAATGCTGTATATTATTCCCACCCACTTGGTACCTAATAGTATAGCTGCCTTGCGTTaGTGTCAGGTTCATATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLTQMLYIIPTHLVPNSIAALR*CQVHIQ Trigger: CTGAATATGAACCTGACACCAACGCAAGGCAGCTAT...ACTATTAGGTACCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | AGACACTTAAGTGCTTCACTCGAATTTGATAGGAGTTaGGAGAAGGTGTCATCACAATGGCCTGGAGATATA | + |
|
Preference number: 4 (lower is better) Translates to: RHLSASLEFDRS*EKVSSQWPGDI Trigger: TATATCTCCAGGCCATTGTGATGACACCTTCTCCAAACTCCTATCAAATTCGAGTGAAGCACTTAAGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTGAAATAGCAAGCTGCTaGATCTTGAACTGTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSVRTLHQLLSNFVSRVAEIASC*ILNCML Trigger: CAACATACAGTTCAAGATCCAGCAGCTTGCTATTTC...AGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | CATTCAGCTGGTAGCCCCCATGGAAGAAATCATCTAAACCTTTTCCTAAGTGAAGTGTCAGCAACTCGATaGAGAAATTCAATTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSAGSPHGRNHLNLFLSEVSATR*RNSITK Trigger: CTTTGTAATTGAATTTCTGCATCGAGTTGCTGACAC...TTCACTTAGGAAAAGGTTTAGATGATTTCTTCCATGGGGGCTACCAGCTGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCCTTAGCTTAAAGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTGATCAAATGTATAGCTaGCTTGCGTTGGTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TFLSLKLRKNPTSITKQLDQMYS*LALVSG Trigger: ACCTGACACCAACGCAAGGCAGCTATACATTTGATC...AAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCTTTAAGCTAAGGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CCA 90 bp | GGTAGCTTGACACAAATGCTGTATATTATTCCCACCCACTTGGTACCTAATAGTGAAATAGCAAGCTGCTaGATCTTGAACTGTATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLTQMLYIIPTHLVPNSEIASC*ILNCML Trigger: CAACATACAGTTCAAGATCCAGCAGCTTGCTATTTC...ACTATTAGGTACCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| 3UTR CAA 72 bp | ATGTCCAATCCCAACACTGAACTTGTAAATCTTAAGTaGACCCTGAATACTCAGGCTCCCCCTATTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MSNPNTELVNLK*TLNTQAPPISF Trigger: AAAAGAAATAGGGGGAGCCTGAGTATTCAGGGTCAACTTAAGATTTACAAGTTCAGTGTTGGGATTGGACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR TCA 90 bp | TGTATTGAAGCTAATTCTCAAGGTCTGGAAACCAACAGCTTTATTCAATCCATATTCCATCTGGAGGAATaGATGACAAAACTCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CIEANSQGLETNSFIQSIFHLEE*MTKLFQ Trigger: CTGAAAGAGTTTTGTCATTCATTCCTCCAGATGGAA...TATGGATTGAATAAAGCTGTTGGTTTCCAGACCTTGAGAATTAGCTTCAATACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAGGCGACGCCATGGGATGTaGGATAGCTGCCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAISSLGTDTEMAKIRRRRHGM*DSCPVG Trigger: CCCCACTGGGCAGCTATCCAACATCCCATGGCGTCG...CCTTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCCAGCGTTTGAATCGGATGCATGGGTGGAAGCTGACGTCATCTAGTAGCCGACGCCATGGGATGTaGGATAGCTGCCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSQRLNRMHGWKLTSSSSRRHGM*DSCPVG Trigger: CCCCACTGGGCAGCTATCCAACATCCCATGGCGTCG...GCTACTAGATGACGTCAGCTTCCACCCATGCATCCGATTCAAACGCTGGGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCTATTAGATGGGGGCCACGGCGGCACTGCTGCTGCATCGTTGGCACGCAAATGTATAGCTGCCTaGCGTTGGTGTCAGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ASLLDGGHGGTAAASLARKCIAA*RWCQVH Trigger: ATGAACCTGACACCAACGCAAGGCAGCTATACATTT...GCGTGCCAACGATGCAGCAGCAGTGCCGCCGTGGCCCCCATCTAATAGGGAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGATCGGGTATAGGGCTTAACTGCAGCCCACTCCTGGCAGCGAGTGCTGCGTTTTGTGGAGTAATTTaGCCCACATCCCATGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGSGIGLNCSPLLAASAAFCGVI*PTSHAS Trigger: ACTAGCATGGGATGTGGGCAAAATTACTCCACAAAA...CGCAGCACTCGCTGCCAGGAGTGGGCTGCAGTTAAGCCCTATACCCGATCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GGAGCACGGAGCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTAAATGTATAGCTGCCTaGCGTTGGTGTCAGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GARSCSAPCQGHVEVAFAKCIAA*RWCQVH Trigger: ATGAACCTGACACCAACGCAAGGCAGCTATACATTT...AGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGCTCCGTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGAGGGACACTTTTGTTTGTTCCCAACCCCAGTACATAGCTATGGGTGTGCGACGCCATGGGATGTaGGATAGCTGCCCAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NVRDTFVCSQPQYIAMGVRRHGM*DSCPVG Trigger: CCCCACTGGGCAGCTATCCAACATCCCATGGCGTCG...CACACCCATAGCTATGTACTGGGGTTGGGAACAAACAAAAGTGTCCCTCACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS CCA 90 bp | ACTTCACTCCTGCTCGACGCCATGGGATGTTGGATAGCTGCCCAGTaGGGAGTGTATCCCCAACATTACTACTGCCAAAGTAGTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLLLDAMGCWIAAQ*GVYPQHYYCQSSPE Trigger: TTCAGGACTACTTTGGCAGTAGTAATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAGGAGTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022371.10 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGTCTGTTTCGGTCCAATaGTTATATCAAACCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVVLPARAMWKWLLLQCLSVSVQ*LYQTGH Trigger: GTGGCCGGTTTGATATAACAATTGGACCGAAACAGA...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGTATAGCTGCCTTGCGTaGGTGTCAGGTTCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVVLPARAMWKWLLLQCLYSCLA*VSGSYS Trigger: TGAATATGAACCTGACACCAACGCAAGGCAGCTATA...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGAAGACTTGGGAGCTTTaGTGGAGTAATTTTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVVLPARAMWKWLLLQCLKTWEL*WSNFAH Trigger: GTGGGCAAAATTACTCCACAAAAGCTCCCAAGTCTT...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GAGACTGTGCGAGAGGCTGAAGCTGCTTCAATCAAAATCCGAACAGATGCTGGCGGGTTCTCTTCTGGCTaGGGTGCTCCTGACTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ETVREAEAASIKIRTDAGGFSSG*GAPDCK Trigger: TTTACAGTCAGGAGCACCCAAGCCAGAAGAGAACCC...GCCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGTCACATACACTGGTATaGCCACTAGATTTTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVVLPARAMWKWLLLQCLSHTLV*PLDFVS Trigger: GCTCACAAAATCTAGTGGCAATACCAGTGTATGTGA...CAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTTCTGTTTCGGTCCAATaGTTATATCAAACCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSAPCQGHVEVAFATVLASVSVQ*LYQTGH Trigger: GTGGCCGGTTTGATATAACAATTGGACCGAAACAGA...AGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| CDS-3UTR CAA 90 bp | CTGACACATCACAGACTGAGACAGTTCCTGCTGGTAGATGAGACCAGTTGGCTTGGGTTCTCTTCTGGCTaGGGTGCTCCTGACTGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LTHHRLRQFLLVDETSWLGFSSG*GAPDCK Trigger: TTTACAGTCAGGAGCACCCAAGCCAGAAGAGAACCC...AAGCCAACTGGTCTCATCTACCAGCAGGAACTGTCTCAGTCTGTGATGTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| CDS GCA 90 bp | TTTGTGTACTTCACTCCTGCTCGACGCCATGGGATGTTGGATAGCTaGCCAGTGGGGAGTGTATCCCCAACATTACTACTGCCTGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: FVYFTPARRHGMLDS*PVGSVSPTLLLPVI Trigger: TATTACAGGCAGTAGTAATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAGGAGTGAAGTACACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
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| CDS-3UTR CAA 90 bp | ATCCGAACAGATGCTGGCTTTACTCTGCGCTGGGTCAGAAAGACTCCCTGGTACGCAAGCTGCTGGATCTaGAACTGTATGTTGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IRTDAGFTLRWVRKTPWYASCWI*NCMLRF Trigger: AAACCTCAACATACAGTTCAAGATCCAGCAGCTTGC...GTACCAGGGAGTCTTTCTGACCCAGCGCAGAGTAAAGCCAGCATCTGTTCGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS GCA 90 bp | CCACATCCCATGCTAGTACCTTGGTCACGGGATCAAATGTATAGCTaGCTTGCGTTGGTGTCAGGTTCATATTCAGCACAACTTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHPMLVPWSRDQMYS*LALVSGSYSAQLWA Trigger: TGCCCAAAGTTGTGCTGAATATGAACCTGACACCAACGCAAGGCAGCTATACATTTGATCCCGTGACCAAGGTACTAGCATGGGATGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS-3UTR CAA 90 bp | TGTAGTGCTCCCTGCCAGGGCCATGTGGAAGTGGCTTTTGCTACAGTGCTTGCTATCTTGAACTGTATGTaGAGGTTTGGGTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSAPCQGHVEVAFATVLAILNCM*RFGFSS Trigger: AGAAGAGAACCCAAACCTCAACATACAGTTCAAGAT...AGCAAGCACTGTAGCAAAAGCCACTTCCACATGGCCCTGGCAGGGAGCACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GAGACTGTGCGAGAGGCTGAAGCTGCTTCAATCAAAATCCGAACAGATGCTGGCGCCAGTGGGAATCCATaGTCTAACATTTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ETVREAEAASIKIRTDAGASGNP*SNISSK Trigger: CTTGGAAGAAATGTTAGACAATGGATTCCCACTGGC...GCCAGCATCTGTTCGGATTTTGATTGAAGCAGCTTCAGCCTCTCGCACAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGGCAATCTCCTCTCTTGGGACAGACACTGAGATGGCTAAGATCAGAAATCTTGAACTGTATGTaGAGGTTTGGGTTCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GVGQSPLLGQTLRWLRSEILNCM*RFGFSS Trigger: AGAAGAGAACCCAAACCTCAACATACAGTTCAAGAT...TTCTGATCTTAGCCATCTCAGTGTCTGTCCCAAGAGAGGAGATTGCCCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
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| CDS-3UTR CAA 90 bp | GGTAAACTTTCCATTGCATTGACTTACAGAATGGATGGCAGCCTGTGTTCACGGTATAGCTGCCTTGCGTaGGTGTCAGGTTCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKLSIALTYRMDGSLCSRYSCLA*VSGSYS Trigger: TGAATATGAACCTGACACCAACGCAAGGCAGCTATA...CCGTGAACACAGGCTGCCATCCATTCTGTAAGTCAATGCAATGGAAAGTTTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | AATGTGAGGGACACTTTTGTTTGTTCCCAACCCCAGTACATAGCTATGGGTGTGAAGACTTGGGAGCTTTaGTGGAGTAATTTTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVRDTFVCSQPQYIAMGVKTWEL*WSNFAH Trigger: GTGGGCAAAATTACTCCACAAAAGCTCCCAAGTCTT...CACACCCATAGCTATGTACTGGGGTTGGGAACAAACAAAAGTGTCCCTCACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGCACAGGAAGGAAGCTGTGCGGTCTAGGTATGGTCGTGAGATAAAGGATCTGCCTGTAATAGAATaGACGACAGAACGTAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: KMHRKEAVRSRYGREIKDLPVIE*TTERRI Trigger: AATTCTACGTTCTGTCGTCAATTCTATTACAGGCAG...ATCCTTTATCTCACGACCATACCTAGACCGCACAGCTTCCTTCCTGTGCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154460.8 |
||
| CDS CCA 90 bp | AAAAGTGTCAGCAACTCGATGCAGAAATTCAATTACAAAGAGAGGTaGCACTTCGGTCTGTATCACAGACACAAAGAAGAGCTTATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: KSVSNSMQKFNYKER*HFGLYHRHKEELIP Trigger: CGGGATAAGCTCTTCTTTGTGTCTGTGATACAGACCGAAGTGCCACCTCTCTTTGTAATTGAATTTCTGCATCGAGTTGCTGACACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022371.10 ENSMUST00000126536.8 ENSMUST00000130291.8 ENSMUST00000130370.3 ENSMUST00000154460.8 |
||
| CDS TCA 90 bp | CCTTGCGTTGGTGTCAGGTTCATATTCAGCACAACTTTGGGCATGTaGACAGTCACTGTGATTCCTTCAATTGTTTTTCCCATATTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCVGVRFIFSTTLGM*TVTVIPSIVFPIFC Trigger: ACAGAATATGGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTGCTGAATATGAACCTGACACCAACGCAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTTCACATACACTGGTATaGCCACTAGATTTTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVRTLHQLLSNFVSRVASHTLV*PLDFVS Trigger: GCTCACAAAATCTAGTGGCAATACCAGTGTATGTGA...AGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | AGCTCCGTAAGAACCCTACATCAATTACTAAGCAACTTTGTTAGCAGGGTAGCTTTTTGTGGAGTAATTTaGCCCACATCCCATGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVRTLHQLLSNFVSRVAFCGVI*PTSHAS Trigger: ACTAGCATGGGATGTGGGCAAAATTACTCCACAAAA...AGCTACCCTGCTAACAAAGTTGCTTAGTAATTGATGTAGGGTTCTTACGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS-3UTR CAA 90 bp | GGTAGCTTGACACAAATGCTGTATATTATTCCCACCCACTTGGTACCTAATAGTGCAAGCTGCTGGATCTaGAACTGTATGTTGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSLTQMLYIIPTHLVPNSASCWI*NCMLRF Trigger: AAACCTCAACATACAGTTCAAGATCCAGCAGCTTGC...ACTATTAGGTACCAAGTGGGTGGGAATAATATACAGCATTTGTGTCAAGCTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS TCA 90 bp | TCAGGTTCATATTCAGCACAACTTTGGGCATGTGAACAGTCACTGTaGTTCCTTCAATTGTTTTTCCCATATTCTGTTTCGGTCCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSYSAQLWACEQSL*FLQLFFPYSVSVQL Trigger: CAATTGGACCGAAACAGAATATGGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTGCTGAATATGAACCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
||
| CDS GCA 72 bp | TTCACTCCTGCTCGACGCCATGGGATGTTGGATAGCTaGCCAGTGGGGAGTGTATCCCCAACATTACTACTG | + |
|
Preference number: 6 (lower is better) Translates to: FTPARRHGMLDS*PVGSVSPTLLL Trigger: CAGTAGTAATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAGGAGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000130291.8 ENSMUST00000154460.8 |
||
| CDS CCA 72 bp | CTGCTCGACGCCATGGGATGTTGGATAGCTGCCCAGTaGGGAGTGTATCCCCAACATTACTACTGCCAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLDAMGCWIAAQ*GVYPQHYYCQS Trigger: ACTTTGGCAGTAGTAATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022371.10 |
||
| CDS CCA 72 bp | TTGTGTACTTCACTCCTGCTCGACGCCATGGGATGTTaGATAGCTGCCCAGTGGGGAGTGTATCCCCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: LCTSLLLDAMGC*IAAQWGVYPQH Trigger: ATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAGGAGTGAAGTACACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 |
||
| CDS CCA 72 bp | CTGCTCGACGCCATGGGATGTTGGATAGCTGCCCAGTaGGGAGTGTATCCCCAACATTACTACTGCCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLDAMGCWIAAQ*GVYPQHYYCLK Trigger: TTTCAGGCAGTAGTAATGTTGGGGATACACTCCCCACTGGGCAGCTATCCAACATCCCATGGCGTCGAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126536.8 |
||
| CDS CAA 72 bp | CCTTGGTCACGGGATCAAATGTATAGCTGCCTTGCGTaGGTGTCAGGTTCATATTCAGCACAACTTTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWSRDQMYSCLA*VSGSYSAQLWA Trigger: TGCCCAAAGTTGTGCTGAATATGAACCTGACACCAACGCAAGGCAGCTATACATTTGATCCCGTGACCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
||
| CDS CAA 90 bp | ATGCTAGTACCTTGGTCACGGGATCAAATGTATAGCTGCCTTGCGTaGGTGTCAGGTTCATATTCAGCACAACTTTGGGCATGTGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: MLVPWSRDQMYSCLA*VSGSYSAQLWACEQ Trigger: CTGTTCACATGCCCAAAGTTGTGCTGAATATGAACCTGACACCAACGCAAGGCAGCTATACATTTGATCCCGTGACCAAGGTACTAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS CCA 72 bp | CTTGGTCACGGGATCAAATGTATAGCTGCCTTGCGTTaGTGTCAGGTTCATATTCAGCACAACTTTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LGHGIKCIAALR*CQVHIQHNFGH Trigger: ATGCCCAAAGTTGTGCTGAATATGAACCTGACACCAACGCAAGGCAGCTATACATTTGATCCCGTGACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS GCA 72 bp | ATGCTAGTACCTTGGTCACGGGATCAAATGTATAGCTaGCTTGCGTTGGTGTCAGGTTCATATTCAGCACAA | + |
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Preference number: 6 (lower is better) Translates to: MLVPWSRDQMYS*LALVSGSYSAQ Trigger: TTGTGCTGAATATGAACCTGACACCAACGCAAGGCAGCTATACATTTGATCCCGTGACCAAGGTACTAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS GCA 72 bp | TCCAAGCGGTTCACTTTTAAGCCTGAAATAGCAAGCTaGTGGATCTTGAACTGTATGTTGAGGTTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKRFTFKPEIAS*WILNCMLRFGF Trigger: GAACCCAAACCTCAACATACAGTTCAAGATCCAGCAGCTTGCTATTTCAGGCTTAAAAGTGAACCGCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS TCA 72 bp | GGTGTCAGGTTCATATTCAGCACAACTTTGGGCATGTaGACAGTCACTGTGATTCCTTCAATTGTTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GVRFIFSTTLGM*TVTVIPSIVFP Trigger: GGGAAAAACAATTGAAGGAATCACAGTGACTGTTCACATGCCCAAAGTTGTGCTGAATATGAACCTGACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS CCA 72 bp | AGCAACTCGATGCAGAAATTCAATTACAAAGAGAGGTaGCACTTCGGTCTGTATCACAGACACAAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SNSMQKFNYKER*HFGLYHRHKEE Trigger: CTCTTCTTTGTGTCTGTGATACAGACCGAAGTGCCACCTCTCTTTGTAATTGAATTTCTGCATCGAGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022371.10 ENSMUST00000126536.8 ENSMUST00000130291.8 ENSMUST00000130370.3 ENSMUST00000154460.8 |
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| CDS CCA 72 bp | AAGCGGTTCACTTTTAAGCCTGAAATAGCAAGCTGCTaGATCTTGAACTGTATGTTGAGGTTTGGGTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: KRFTFKPEIASC*ILNCMLRFGFS Trigger: AGAGAACCCAAACCTCAACATACAGTTCAAGATCCAGCAGCTTGCTATTTCAGGCTTAAAAGTGAACCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS CAA 72 bp | TTGAACTGTATGTTGAGGTTTGGGTTCTCTTCTGGCTaGGGTGCTCCTGACTGTAAATTTACTAGTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: LNCMLRFGFSSG*GAPDCKFTSPL Trigger: TAAAGGACTAGTAAATTTACAGTCAGGAGCACCCAAGCCAGAAGAGAACCCAAACCTCAACATACAGTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS TCA 72 bp | ATATACTATGACCACATTATCCTTAATTGCAGCCTCTaGACACTCACCAAAGTAGTCCTGAAAAGTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IYYDHIILNCSL*TLTKVVLKSVS Trigger: GCTGACACTTTTCAGGACTACTTTGGTGAGTGTTCAGAGGCTGCAATTAAGGATAATGTGGTCATAGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130291.8 ENSMUST00000130370.3 ENSMUST00000154460.8 |
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| CDS CAA 72 bp | CTTCAATTGTTTTTCCCATATTCTGTTTCGGTCCAATaGTTATATCAAACCGGCCACAAGAGCTGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LQLFFPYSVSVQ*LYQTGHKSCFP Trigger: AGGAAAACAGCTCTTGTGGCCGGTTTGATATAACAATTGGACCGAAACAGAATATGGGAAAAACAATTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022371.10 ENSMUST00000154460.8 ENSMUST00000224016.2 |
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| CDS CAA 90 bp | ATCAGTTCTTTCAAAATGTTAGATTCAGTAGCCAGTGGGAATCCATaGTCTAACATTTCTTCCAAGAGCTCATATACTATGACCACATTA | + |
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Preference number: 6 (lower is better) Translates to: ISSFKMLDSVASGNP*SNISSKSSYTMTTL Trigger: TAATGTGGTCATAGTATATGAGCTCTTGGAAGAAATGTTAGACAATGGATTCCCACTGGCTACTGAATCTAACATTTTGAAAGAACTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130291.8 ENSMUST00000130370.3 ENSMUST00000154460.8 |
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