Pregenerated sensors for AP2S1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008036Ensembl transcript IDs: ENSMUST00000086112.8, ENSMUST00000205590.2, ENSMUST00000205607.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGGGCCAGCTaGGGAAGGGAAGGGGCTGCTAGGGTGGGCCTCAGGCCTGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LPCGLDPAGSFLWAS*GREGAARVGLRPGR Trigger: CCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTTCCCTTCCTCAGCTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR CCA 90 bp | ACGGTGGCCTCTGCCATCCACGGAGGGCCCAGAGGCAGTGGGTTCTaGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: TVASAIHGGPRGSGF*PPPLWPRPCRVLPL Trigger: CAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCCACTGCCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR CCA 90 bp | ATCCACGGAGGGCCCAGAGGCAGTGGGTTCTGGCCTCCTCCCCTGTaGCCTAGACCCTGCCGGGTCCTTCCTCTGGGCCAGCTGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: IHGGPRGSGFWPPPL*PRPCRVLPLGQLRK Trigger: CTTCCTCAGCTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCCACTGCCTCTGGGCCCTCCGTGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR GCA 90 bp | ATCACACGACAATGGCACAGTTACTCGGGACATCACGGTGGCCTCTaGCATCCACGGAGGGCCCAGAGGCAGTGGGTTCTGGCCTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ITRQWHSYSGHHGGL*HPRRAQRQWVLASS Trigger: GGAGGAGGCCAGAACCCACTGCCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTGTCGTGTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR CCA 90 bp | TCACAGCATCACACGACAATGGCACAGTTACTCGGGACATCACGGTaGCCTCTGCCATCCACGGAGGGCCCAGAGGCAGTGGGTTCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SQHHTTMAQLLGTSR*PLPSTEGPEAVGSG Trigger: GCCAGAACCCACTGCCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTGTCGTGTGATGCTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR CCA 90 bp | TTATTGGGGGCTACACACACACACACTCACAGCATCACACGACAATaGCACAGTTACTCGGGACATCACGGTGGCCTCTGCCATCCACGG | + |
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Preference number: 1 (lower is better) Translates to: LLGATHTHTHSITRQ*HSYSGHHGGLCHPR Trigger: CCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTGTCGTGTGATGCTGTGAGTGTGTGTGTGTGTAGCCCCCAATAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR TCA 90 bp | CTACGAAGTTGTGGATGGCCTCGAGATAGGCCAGATTGTTGTCGTTaGCATCCACGCAGATGCAGAAGTAGAGGCCAGCGTAGCGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: LRSCGWPRDRPDCCR*HPRRCRSRGQRSVG Trigger: ACCGACGCTACGCTGGCCTCTACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAGGCCATCCACAACTTCGTAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGTTACTCGGGACATCACGGTGGCCTCTGCCATCCACGGAGGGCCCAGAGAAGGGGCTGCTAGGGTaGGCCTCAGGCCTGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: AQLLGTSRWPLPSTEGPEKGLLG*ASGLAG Trigger: GCCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTT...CTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCAGGACCACAGGTTTATTGGGGGCTACACACACACACACTCACAGCATCTGGCCTCCTCCCCTGTaGCCTAGACCCTGCCGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PGRTTGLLGATHTHTHSIWPPPL*PRPCRV Trigger: GACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCA...GATGCTGTGAGTGTGTGTGTGTGTAGCCCCCAATAAACCTGTGGTCCTGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCGAGATAGGCCAGATTGTTGTCGTTGACATCCACGCAGATGCAGAAGTATCCTCCCTGGAGGCTTaGAACATTCGCTGCTCGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLEIGQIVVVDIHADAEVSSLEA*NIRCSG Trigger: TCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGA...TACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| 3UTR-3UTR CAA 90 bp | TCGGGACATCACGGTGGCCTCTGCCATCCACGGAGGGCCCAGAGGCAGTGGGTTGGACGAGCAGGCAGGTaGGTCCAGCAGGCCGGGCTG | + |
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Preference number: 3 (lower is better) Translates to: SGHHGGLCHPRRAQRQWVGRAGR*VQQAGL Trigger: CAGCCCGGCCTGCTGGACCAACCTGCCTGCTCGTCC...AACCCACTGCCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR GCA 72 bp | AGTGGGTTCTGGCCTCCTCCCCTGTGGCCTAGACCCTaGCGGGTCCTTCCTCTGGGCCAGCTGAGGAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: SGFWPPPLWPRP*RVLPLGQLRKG Trigger: TCCCTTCCTCAGCTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR GCA 72 bp | CAATGGCACAGTTACTCGGGACATCACGGTGGCCTCTaGCATCCACGGAGGGCCCAGAGGCAGTGGGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QWHSYSGHHGGL*HPRRAQRQWVL Trigger: CAGAACCCACTGCCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR TCA 72 bp | TGTGGATGGCCTCGAGATAGGCCAGATTGTTGTCGTTaGCATCCACGCAGATGCAGAAGTAGAGGCCAGCGT | + |
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Preference number: 3 (lower is better) Translates to: CGWPRDRPDCCR*HPRRCRSRGQR Trigger: ACGCTGGCCTCTACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAGGCCATCCACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| 3UTR CCA 72 bp | ATCTTGAAGTTCCGGAACTGCTCCTCCCTGGAGGCTTaGAACATTCGCTGCTCGGGAAAACATCTCCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: ILKFRNCSSLEA*NIRCSGKHLLL Trigger: TAGGAGGAGATGTTTTCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAACTTCAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR GCA 90 bp | GAAGGGAAGGGGCTGCTAGGGTGGGCCTCAGGCCTGGCAGGCAGGGGACGAGCACAGGCGCGTCTTGCCTaGCCGGTTCTGGATAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: EGKGLLGWASGLAGRGRAQARLA*PVLDKD Trigger: ATCCTTATCCAGAACCGGGCAGGCAAGACGCGCCTG...TGCTCGTCCCCTGCCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTTCCCTTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGGGCCAGCACTGCATGTACCACTTaGCCAGGCGCGTCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGLLPCGLDPAGSFLWASTACTT*PGASCL Trigger: CAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGT...GCTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTGAGGAAGGGAAGGGGCTGCTAGGGTGGGCCTCAGGCCTGGCAGGCAGGGCACCTTCGTCTGGCTaGTCTCTCGGATCTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PAEEGKGLLGWASGLAGRAPSSG*SLGSLL Trigger: CAGGAGAGATCCGAGAGACCAGCCAGACGAAGGTGC...CCTGCCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTTCCCTTCCTCAGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | GCAGGCAGGGGACGAGCAGGCAGGTTGGTCCAGCAGGCCGGGCTGGGCAGAGCCTCCTCGATCAGCTTCTaGTTCTCGTCGTCATCGAAC | + |
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Preference number: 4 (lower is better) Translates to: AGRGRAGRLVQQAGLGRASSISF*FSSSSN Trigger: GTTCGATGACGACGAGAAGCAGAAGCTGATCGAGGA...GGCTCTGCCCAGCCCGGCCTGCTGGACCAACCTGCCTGCTCGTCCCCTGCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | CACAGTTACTCGGGACATCACGGTGGCCTCTGCCATCCACGGAGGGCCCAGAGGACGGTGACCACGGCGTaGACCTCCTCGATCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HSYSGHHGGLCHPRRAQRTVTTA*TSSISF Trigger: GAAGCTGATCGAGGAGGTGCACGCCGTGGTCACCGT...CCTCTGGGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTGAGGAAGGGAAGGGGCTGCTAGGGTGGGCCTCAGGCCTGGCAGGCAGGTCCACAAAGTTGGTGTaGTTGGCATCCCTGACGGTG | + |
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Preference number: 4 (lower is better) Translates to: PAEEGKGLLGWASGLAGRSTKLV*LASLTV Trigger: CACCGTCAGGGATGCCAAGCACACCAACTTTGTGGA...CCTGCCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTTCCCTTCCTCAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR CCA 90 bp | GAAGGGAAGGGGCTGCTAGGGTGGGCCTCAGGCCTGGCAGGCAGGGGACGAGCATTCAGCACCTTCGTCTaGCTGGTCTCTCGGATCTCT | + |
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Preference number: 4 (lower is better) Translates to: EGKGLLGWASGLAGRGRAFSTFV*LVSRIS Trigger: AGAGATCCGAGAGACCAGCCAGACGAAGGTGCTGAA...TGCTCGTCCCCTGCCTGCCAGGCCTGAGGCCCACCCTAGCAGCCCCTTCCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | AGTGGGTTCTGGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGTGCAGCATCAGCAGCTaGTTCAGCACCTTCGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SGFWPPPLWPRPCRVLPLCSISS*FSTFVW Trigger: CCAGACGAAGGTGCTGAAGCAGCTGCTGATGCTGCA...CAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | GTAGAGGCCAGCGTAGCGTCGGTAGATGATCTTGAAGTTCCGGAACTGCTCCTCACGGTGACCACGGCGTaGACCTCCTCGATCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: VEASVASVDDLEVPELLLTVTTA*TSSISF Trigger: GAAGCTGATCGAGGAGGTGCACGCCGTGGTCACCGT...GAGGAGCAGTTCCGGAACTTCAAGATCATCTACCGACGCTACGCTGGCCTCTAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR GCA 90 bp | TTCCGGAACTGCTCCTCCCTGGAGGCTTGGAACATTCGCTGCTCGGGAAAACATCAGGCGCGTCTTGCCTaGCCGGTTCTGGATAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FRNCSSLEAWNIRCSGKHQARLA*PVLDKD Trigger: ATCCTTATCCAGAACCGGGCAGGCAAGACGCGCCTG...ATGTTTTCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR GCA 90 bp | TTGAAGTTCCGGAACTGCTCCTCCCTGGAGGCTTGGAACATTCGCTGCTCGGGATCCACAAAGTTGGTGTaGTTGGCATCCCTGACGGTG | + |
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Preference number: 4 (lower is better) Translates to: LKFRNCSSLEAWNIRCSGSTKLV*LASLTV Trigger: CACCGTCAGGGATGCCAAGCACACCAACTTTGTGGA...TCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAACTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGGACCACAGGTTTATTGGGGGCTACACACACACACACTCACAGCATCTCGTCGTCATCGAACTaGATGTACCACTTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGRTTGLLGATHTHTHSISSSSN*MYHLAR Trigger: CCTGGCCAAGTGGTACATGCAGTTCGATGACGACGA...GATGCTGTGAGTGTGTGTGTGTGTAGCCCCCAATAAACCTGTGGTCCTGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR GCA 90 bp | TTCCGGAACTGCTCCTCCCTGGAGGCTTGGAACATTCGCTGCTCGGGAAAACATTCGTCGTCATCGAACTaGATGTACCACTTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FRNCSSLEAWNIRCSGKHSSSSN*MYHLAR Trigger: CCTGGCCAAGTGGTACATGCAGTTCGATGACGACGA...ATGTTTTCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CCA 90 bp | TCACACGACAATGGCACAGTTACTCGGGACATCACGGTGGCCTCTGCCATCCACTTGCCTGCCCGGTTCTaGATAAGGATGAATCGGATC | + |
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Preference number: 4 (lower is better) Translates to: SHDNGTVTRDITVASAIHLPARF*IRMNRI Trigger: GATCCGATTCATCCTTATCCAGAACCGGGCAGGCAA...GTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTGTCGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| 3UTR CAA 72 bp | GATCTTGAAGTTCCGGAACTGCTCCTCCCTGGAGGCTaGGAACATTCGCTGCTCGGGAAAACATCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: DLEVPELLLPGG*EHSLLGKTSPP Trigger: AGGAGGAGATGTTTTCCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAACTTCAAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CCA 90 bp | CTCGAGATAGGCCAGATTGTTGTCGTTGACATCCACGCAGATGCAGAAGTAGAGACTGCATGTACCACTTaGCCAGGCGCGTCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LEIGQIVVVDIHADAEVETACTT*PGASCL Trigger: CAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGT...CTCTACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR TCA 90 bp | GAAGTAGAGGCCAGCGTAGCGTCGGTAGATGATCTTGAAGTTCCGGAACTGCTCCCTGCAGATCTTGGTTaGAAGTCACCTCCACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: EVEASVASVDDLEVPELLPADLG*KSPPQS Trigger: ACTTTGTGGAGGTGACTTTCAACCAAGATCTGCAGG...GAGCAGTTCCGGAACTTCAAGATCATCTACCGACGCTACGCTGGCCTCTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CCA 90 bp | GGCCTCGAGATAGGCCAGATTGTTGTCGTTGACATCCACGCAGATGCAGAAGTATTGCCTGCCCGGTTCTaGATAAGGATGAATCGGATC | + |
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Preference number: 4 (lower is better) Translates to: GLEIGQIVVVDIHADAEVLPARF*IRMNRI Trigger: GATCCGATTCATCCTTATCCAGAACCGGGCAGGCAA...TACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CCA 90 bp | GATGGCCTCGAGATAGGCCAGATTGTTGTCGTTGACATCCACGCAGATGCAGAACAGCCCTGCAGATCTTaGTTGAAAGTCACCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: DGLEIGQIVVVDIHADAEQPCRS*LKVTST Trigger: TGTGGAGGTGACTTTCAACCAAGATCTGCAGGGCTG...TTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAGGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CAA 90 bp | AGTGGGTTCTGGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGTTGGCCAGGCGCGTCTaGCCTGCCCGGTTCTGGATA | + |
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Preference number: 5 (lower is better) Translates to: SGFWPPPLWPRPCRVLPLLARRV*PARFWI Trigger: TATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAA...CAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCCACT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGGGCCAGAACTGCATGTACCACTaGGCCAGGCGCGTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: FWPPPLWPRPCRVLPLGQNCMYH*ARRVLP Trigger: AGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTT...CTGGCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS-3UTR CAA 90 bp | GGGTTCTGGCCTCCTCCCCTGTGGCCTAGACCCTGCCGGGTCCTTCCTCTGGGCACAAAGTTGGTGTGCTaGGCATCCCTGACGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: GFWPPPLWPRPCRVLPLGTKLVC*ASLTVT Trigger: GGTCACCGTCAGGGATGCCAAGCACACCAACTTTGT...GCCCAGAGGAAGGACCCGGCAGGGTCTAGGCCACAGGGGAGGAGGCCAGAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS GCA 90 bp | GCATCCCTGACGGTGACCACGGCGTGCACCTCCTCGATCAGCTTCTaGTTCTCGTCGTCATCGAACTGCATGTACCACTTGGCCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: ASLTVTTACTSSISF*FSSSSNCMYHLARR Trigger: GCGCCTGGCCAAGTGGTACATGCAGTTCGATGACGACGAGAAGCAGAAGCTGATCGAGGAGGTGCACGCCGTGGTCACCGTCAGGGATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205590.2 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTTCCGGAACTGCTCCTCCCTGGAGGCTTGGAACATTCGCTGCTCGGGTTGGCCAGGCGCGTCTaGCCTGCCCGGTTCTGGATA | + |
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Preference number: 5 (lower is better) Translates to: LEVPELLLPGGLEHSLLGLARRV*PARFWI Trigger: TATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAA...CCCGAGCAGCGAATGTTCCAAGCCTCCAGGGAGGAGCAGTTCCGGAACTTCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CAA 90 bp | CAATGGCACAGTTACTCGGGACATCACGGTGGCCTCTGCCATCCACGGAGGGCCCGGAACTCCACAAAGTaGGTGTGCTTGGCATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: QWHSYSGHHGGLCHPRRARNSTK*VCLASL Trigger: CAGGGATGCCAAGCACACCAACTTTGTGGAGTTCCG...GGCCCTCCGTGGATGGCAGAGGCCACCGTGATGTCCCGAGTAACTGTGCCATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS GCA 90 bp | CAGCCCTGCAGATCTTGGTTGAAAGTCACCTCCACAAAGTTGGTGTaGTTGGCATCCCTGACGGTGACCACGGCGTGCACCTCCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: QPCRSWLKVTSTKLV*LASLTVTTACTSSI Trigger: GATCGAGGAGGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGGTGACTTTCAACCAAGATCTGCAGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS-3UTR CAA 90 bp | GAAGTAGAGGCCAGCGTAGCGTCGGTAGATGATCTTGAAGTTCCGGAACTGCTCAACTGCATGTACCACTaGGCCAGGCGCGTCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EVEASVASVDDLEVPELLNCMYH*ARRVLP Trigger: AGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTT...GAGCAGTTCCGGAACTTCAAGATCATCTACCGACGCTACGCTGGCCTCTACTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS GCA 90 bp | CAGCTGCTTCAGCACCTTCGTCTGGCTGGTCTCTCGGATCTCTCCTaGCAGGAACATCTCATCTACCACCGTGTAAACCTTGTAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: QLLQHLRLAGLSDLS*QEHLIYHRVNLVEV Trigger: AACTTCTACAAGGTTTACACGGTGGTAGATGAGATGTTCCTGGCAGGAGAGATCCGAGAGACCAGCCAGACGAAGGTGCTGAAGCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205607.2 |
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| CDS-3UTR CAA 90 bp | CTCGAGATAGGCCAGATTGTTGTCGTTGACATCCACGCAGATGCAGAAGTAGAGGTCACCTCCACAAAGTaGGTGTGCTTGGCATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: LEIGQIVVVDIHADAEVEVTSTK*VCLASL Trigger: CAGGGATGCCAAGCACACCAACTTTGTGGAGGTGAC...CTCTACTTCTGCATCTGCGTGGATGTCAACGACAACAATCTGGCCTATCTCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS CAA 90 bp | CCCTGCAGATCTTGGTTGAAAGTCACCTCCACAAAGTTGGTGTGCTaGGCATCCCTGACGGTGACCACGGCGTGCACCTCCTCGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: PCRSWLKVTSTKLVC*ASLTVTTACTSSIS Trigger: GCTGATCGAGGAGGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGGTGACTTTCAACCAAGATCTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS GCA 72 bp | ACGGTGACCACGGCGTGCACCTCCTCGATCAGCTTCTaGTTCTCGTCGTCATCGAACTGCATGTACCACTTG | + |
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Preference number: 6 (lower is better) Translates to: TVTTACTSSISF*FSSSSNCMYHL Trigger: CAAGTGGTACATGCAGTTCGATGACGACGAGAAGCAGAAGCTGATCGAGGAGGTGCACGCCGTGGTCACCGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205590.2 |
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| CDS CAA 72 bp | TTCTGCTTCTCGTCGTCATCGAACTGCATGTACCACTaGGCCAGGCGCGTCTTGCCTGCCCGGTTCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: FCFSSSSNCMYH*ARRVLPARFWI Trigger: TATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTCGATGACGACGAGAAGCAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205590.2 |
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| CDS CAA 72 bp | ATCTTGAAGTTCCGGAACTCCACAAAGTTGGTGTGCTaGGCATCCCTGACGGTGACCACGGCGTGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: ILKFRNSTKLVC*ASLTVTTACTS Trigger: GGAGGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGTTCCGGAACTTCAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086112.8 |
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| CDS CAA 72 bp | TCTTGGTTGAAAGTCACCTCCACAAAGTTGGTGTGCTaGGCATCCCTGACGGTGACCACGGCGTGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SWLKVTSTKLVC*ASLTVTTACTS Trigger: GGAGGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGGTGACTTTCAACCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS CAA 72 bp | CCCTGCAGATCTTGGTTGAAAGTCACCTCCACAAAGTaGGTGTGCTTGGCATCCCTGACGGTGACCACGGCG | + |
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Preference number: 6 (lower is better) Translates to: PCRSWLKVTSTK*VCLASLTVTTA Trigger: CGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGGTGACTTTCAACCAAGATCTGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS GCA 72 bp | AGATCTTGGTTGAAAGTCACCTCCACAAAGTTGGTGTaGTTGGCATCCCTGACGGTGACCACGGCGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: RSWLKVTSTKLV*LASLTVTTACT Trigger: GGTGCACGCCGTGGTCACCGTCAGGGATGCCAAGCACACCAACTTTGTGGAGGTGACTTTCAACCAAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205590.2 |
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| CDS CAA 72 bp | TCATCGAACTGCATGTACCACTTGGCCAGGCGCGTCTaGCCTGCCCGGTTCTGGATAAGGATGAATCGGATC | + |
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Preference number: 6 (lower is better) Translates to: SSNCMYHLARRV*PARFWIRMNRI Trigger: GATCCGATTCATCCTTATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTCGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205590.2 |
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| CDS CAA 90 bp | TCGATCAGCTTCTGCTTCTCGTCGTCATCGAACTGCATGTACCACTaGGCCAGGCGCGTCTTGCCTGCCCGGTTCTGGATAAGGATGAAT | + |
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Preference number: 6 (lower is better) Translates to: SISFCFSSSSNCMYH*ARRVLPARFWIRMN Trigger: ATTCATCCTTATCCAGAACCGGGCAGGCAAGACGCGCCTGGCCAAGTGGTACATGCAGTTCGATGACGACGAGAAGCAGAAGCTGATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205590.2 |
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| CDS GCA 72 bp | CAGCACCTTCGTCTGGCTGGTCTCTCGGATCTCTCCTaGCAGGAACATCTCATCTACCACCGTGTAAACCTT | + |
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Preference number: 6 (lower is better) Translates to: QHLRLAGLSDLS*QEHLIYHRVNL Trigger: AAGGTTTACACGGTGGTAGATGAGATGTTCCTGGCAGGAGAGATCCGAGAGACCAGCCAGACGAAGGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086112.8 ENSMUST00000205607.2 |
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