Pregenerated sensors for AP2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035152Ensembl transcript IDs: ENSMUST00000018875.13, ENSMUST00000065692.14, ENSMUST00000176430.8, ENSMUST00000176523.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTaGCACCTCTCAGCACTGAGCCCATATGTCCAGTGTCCCTGCACT | + |
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Preference number: 1 (lower is better) Translates to: LPRIPGLALWAGAQL*HLSALSPYVQCPCT Trigger: AGTGCAGGGACACTGGACATATGGGCTCAGTGCTGAGAGGTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 90 bp | GGCGCCCTGTTCTTACTCATGTCTACTCAGCCTCCCCAGGATTCCTaGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACCTCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: GALFLLMSTQPPQDS*ASTVGRSAALPPLS Trigger: GCTGAGAGGTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCTGAGTAGACATGAGTAAGAACAGGGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 90 bp | CCACATAGGGAAGCTGACGGAGCATCAGGGAACCAGTCTCAGCTCTaGTACTCAAGAGCCAAGAGGCCTCGGCAACACACTTTTTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PHREADGASGNQSQL*YSRAKRPRQHTFCL Trigger: CAGGCAAAAAGTGTGTTGCCGAGGCCTCTTGGCTCTTGAGTAGCAGAGCTGAGACTGGTTCCCTGATGCTCCGTCAGCTTCCCTATGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 90 bp | CTTGGCTGGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTaGTGTGTTTGCTTCCCTGCCCTCTGCACTTCAGCTTTCGACAGA | + |
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Preference number: 1 (lower is better) Translates to: LGWGQTPGESDQKEL*CVCFPALCTSAFDR Trigger: TCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 90 bp | ATTGGCTCCAGCATCCCAAGCTTCACAATACGGACCAGGCTTGGCTaGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: IGSSIPSFTIRTRLG*GQTPGESDQKELWC Trigger: ACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGCCAAGCCTGGTCCGTATTGTGAAGCTTGGGATGCTGGAGCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 90 bp | CACACCAATGTGTTCACATCCCCAGTCTTTGTGAGATGGGCCTGCTaGGAGAATCTCCCTCCGCTCTGGAGCTCAAGGACCATGGATGAA | + |
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Preference number: 1 (lower is better) Translates to: HTNVFTSPVFVRWAC*ENLPPLWSSRTMDE Trigger: TTCATCCATGGTCCTTGAGCTCCAGAGCGGAGGGAGATTCTCTCAGCAGGCCCATCTCACAAAGACTGGGGATGTGAACACATTGGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 90 bp | CCTGACCCCAGTGAATGGGTGGAGCACCAAACTCAGTACAGAGTGTaGAAAGAGTCACAGGCAGGCACAGGAAAGACAGAAGGCTTTGAG | + |
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Preference number: 1 (lower is better) Translates to: PDPSEWVEHQTQYRV*KESQAGTGKTEGFE Trigger: CTCAAAGCCTTCTGTCTTTCCTGTGCCTGCCTGTGACTCTTTGCACACTCTGTACTGAGTTTGGTGCTCCACCCATTCACTGGGGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 90 bp | CCAGATAGCATGGGTATAAGGGAGCTCGAAGGCTTAGCCAAGGAATaGCCTGGACAGAGGGGAGGAATGACAATGCAAAAGGCAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: PDSMGIRELEGLAKE*PGQRGGMTMQKARS Trigger: GCTCCTTGCCTTTTGCATTGTCATTCCTCCCCTCTGTCCAGGTCATTCCTTGGCTAAGCCTTCGAGCTCCCTTATACCCATGCTATCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 90 bp | GAATCTGACCAGAAAGAGCTCTGGTGTGTTTGCTTCCCTGCCCTCTaGACTTCAGCTTTCGACAGACGCACACTTTGGCTAAGGAGAGTG | + |
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Preference number: 1 (lower is better) Translates to: ESDQKELWCVCFPAL*TSAFDRRTLWLRRV Trigger: CACTCTCCTTAGCCAAAGTGTGCGTCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAACACACCAGAGCTCTTTCTGGTCAGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 90 bp | CAGACAGTGAGAACTGGCGACATCTTTACACACGTCTACACTCACTaGCCTGCTCCAGGAAAGCCTGGCAAATGTCAGCTCTGCTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: QTVRTGDIFTHVYTH*PAPGKPGKCQLCFH Trigger: GTGAAAGCAGAGCTGACATTTGCCAGGCTTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCTCACTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 90 bp | AACTGTCAGAGGCAGGTGGTCTACCCTGGTCTGTCCCCAGTACCATaGCTTGTAAGTCAGAAGACCACAGTGAGGAGAGAAGACATTTCA | + |
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Preference number: 1 (lower is better) Translates to: NCQRQVVYPGLSPVP*LVSQKTTVRREDIS Trigger: TGAAATGTCTTCTCTCCTCACTGTGGTCTTCTGACTTACAAGGCATGGTACTGGGGACAGACCAGGGTAGACCACCTGCCTCTGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| 3UTR CCA 90 bp | CTCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTaGGACAGCATTGGCTCCAGCATCCCAAGCTTCACAATACGGACC | + |
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Preference number: 1 (lower is better) Translates to: LPNNRSQQEQQSKPS*DSIGSSIPSFTIRT Trigger: GGTCCGTATTGTGAAGCTTGGGATGCTGGAGCCAATGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 90 bp | CTGGGATGGCCACATTCTGGCCTAAACTTCCCTTTCTGCTTGCCCTaGCACATCTTCTTTTGGGAACTACAGTTTTGCTTTGAGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: LGWPHSGLNFPFCLP*HIFFWELQFCFEMG Trigger: TCCCATCTCAAAGCAAAACTGTAGTTCCCAAAAGAAGATGTGTCAGGGCAAGCAGAAAGGGAAGTTTAGGCCAGAATGTGGCCATCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 90 bp | CTGCTTGCCCTGACACATCTTCTTTTGGGAACTACAGTTTTGCTTTaGGATGGGAACACTGCATTTGTAGTGGGAATCCCTTATACTACT | + |
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Preference number: 1 (lower is better) Translates to: LLALTHLLLGTTVLL*DGNTAFVVGIPYTT Trigger: AGTAGTATAAGGGATTCCCACTACAAATGCAGTGTTCCCATCTCAAAGCAAAACTGTAGTTCCCAAAAGAAGATGTGTCAGGGCAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | GTTTGCTTCCCTGCCCTCTGCACTTCAGCTTTCGACAGACGCACACTTTGGCTAGGCAAGGAGCAGGGCTaGCTCCTGCCCCGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: VCFPALCTSAFDRRTLWLGKEQG*LLPRPS Trigger: GCTGGGGCGGGGCAGGAGGCAGCCCTGCTCCTTGCC...TAGCCAAAGTGTGCGTCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | CGCCCCAGCAGGGGCCAGGGCCATCAGTGGATCTCCGCTAAGACTGTGTTTGATAGCAGGTGGCAGAAGTaGGGAATGGTGGAAGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: RPSRGQGHQWISAKTVFDSRWQK*GMVEGD Trigger: ATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCT...ATCAAACACAGTCTTAGCGGAGATCCACTGATGGCCCTGGCCCCTGCTGGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCTTCCCTGCCCTCTGCACTTCAGCTTTCGACAGACGCACACTTTGGCTACCTCCCCAGGATTCCTaGGCTAGCACTGTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VCFPALCTSAFDRRTLWLPPQDS*ASTVGR Trigger: CCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGG...TAGCCAAAGTGTGCGTCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGAGCTCAAGGACCATGGATGAAGGGCAGCTCAGTGAGCTGACAGACAGTGGCTTAGCCAAGGAATaGCCTGGACAGAGGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LWSSRTMDEGQLSELTDSGLAKE*PGQRGG Trigger: TCCTCCCCTCTGTCCAGGTCATTCCTTGGCTAAGCC...ACTGTCTGTCAGCTCACTGAGCTGCCCTTCATCCATGGTCCTTGAGCTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CAA 90 bp | CCAGCAGGGGCCAGGGCCATCAGTGGATCTCCGCTAAGACTGTGTTaGATGAGGGTCAGTCGCCCTTTCTACTCAGTGTTCTACCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: PAGARAISGSPLRLC*MRVSRPFYSVFYLN Trigger: GTTGAGGTAGAACACTGAGTAGAAAGGGCGACTGACCCTCATCAAACACAGTCTTAGCGGAGATCCACTGATGGCCCTGGCCCCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTCAACTTGTCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACGCAGGAGCGCAGCTCTaGCACCTCTCAGCACTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LGQLVFPPNIPPSICLPHAGAQL*HLSALS Trigger: GCTCAGTGCTGAGAGGTGGCAGAGCTGCGCTCCTGC...GTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGACAAGTTGACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CAA 90 bp | ACAGCATTGGCTCCAGCATCCCAAGCTTCACAATACGGACCAGGCTaGGCTGGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: TALAPASQASQYGPG*AGDKHLGNLTRKSS Trigger: AGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGCCAAGCCTGGTCCGTATTGTGAAGCTTGGGATGCTGGAGCCAATGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | GTTTGCTTCCCTGCCCTCTGCACTTCAGCTTTCGACAGACGCACACTTTGGCTAGGAGCTCAAGGACCATaGATGAAGGGCAGCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VCFPALCTSAFDRRTLWLGAQGP*MKGSSV Trigger: CACTGAGCTGCCCTTCATCCATGGTCCTTGAGCTCC...TAGCCAAAGTGTGCGTCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | TCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCATTGGCTCCAGCATCGAGGTCGTTGGAGCCTaGATACCAGGTGCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SQQEQQSKPSWDSIGSSIEVVGA*IPGARL Trigger: CAGCCTGGCACCTGGTATCCAGGCTCCAACGACCTC...GATGCTGGAGCCAATGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTGGTGTGTTTGCTAGCCAAGGAATGACCTaGACAGAGGGGAGGAATGAC | + |
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Preference number: 2 (lower is better) Translates to: AGDKHLGNLTRKSSGVFASQGMT*TEGRND Trigger: GTCATTCCTCCCCTCTGTCCAGGTCATTCCTTGGCT...AGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | GATGGGCCTGCTGAGAGAATCTCCCTCCGCTCTGGAGCTCAAGGACCATGGATGACAGACAGTGAGAACTaGCGACATCTTTACACACGT | + |
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Preference number: 2 (lower is better) Translates to: DGPAERISLRSGAQGPWMTDSEN*RHLYTR Trigger: ACGTGTGTAAAGATGTCGCCAGTTCTCACTGTCTGT...CATCCATGGTCCTTGAGCTCCAGAGCGGAGGGAGATTCTCTCAGCAGGCCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCACGGACCAGGCTTGGCTaGGGACAAACACCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPTTDPNKNSKVSLLGTARTRLG*GQTPGE Trigger: TTCCCCAGGTGTTTGTCCCCAGCCAAGCCTGGTCCG...TGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | GTGCAACGCTGGGCTTCCAGCATGTGTGGTCATGCCTGCTTTTATGTGGGTGCTCTAGTACCAAATGCATaGCAAGGAGGAGCCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: VQRWASSMCGHACFYVGALVPNA*QGGAIS Trigger: AGAGATGGCTCCTCCTTGGCATGCATTTGGTACTAG...AGCACCCACATAAAAGCAGGCATGACCACACATGCTGGAAGCCCAGCGTTGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| 3UTR CAA 90 bp | GAGTGTGCAAAGAGTCACAGGCAGGCACAGGAAAGACAGAAGGCTTaGAGGAAAATAATGAGCCAGCCACATAGGGAAGCTGACGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ECAKSHRQAQERQKA*RKIMSQPHREADGA Trigger: TGCTCCGTCAGCTTCCCTATGTGGCTGGCTCATTATTTTCCTCAAAGCCTTCTGTCTTTCCTGTGCCTGCCTGTGACTCTTTGCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CAA 90 bp | CCAACTGACTCCAGGAATCAGCATCGACAAGGGAACTTGGTCAACTaGTCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACA | + |
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Preference number: 2 (lower is better) Translates to: PTDSRNQHRQGNLVN*SFHPTYHHLSASHT Trigger: TGTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGACAAGTTGACCAAGTTCCCTTGTCGATGCTGATTCCTGGAGTCAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CAA 90 bp | GCCTGCTCCAGGAAAGCCTGGCAAATGTCAGCTCTGCTTTCACTCTaGTTACCTGCATGCATACTTATAACCAAGATGTCAACTGCCACC | + |
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Preference number: 2 (lower is better) Translates to: ACSRKAWQMSALLSL*LPACILITKMSTAT Trigger: GGTGGCAGTTGACATCTTGGTTATAAGTATGCATGCAGGTAACAAGAGTGAAAGCAGAGCTGACATTTGCCAGGCTTTCCTGGAGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCAACTTTGAATGAGCCCTaGAAAACACAGGGAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPTTDPNKNSKVSLLGTATLNEP*KTQGRG Trigger: CCCCCTTCCCTGTGTTTTTCAGGGCTCATTCAAAGT...TGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CCA 90 bp | TCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCAAGAAGTGGGGAATGGTaGAAGGAGATGTCTCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPTTDPNKNSKVSLLGTARSGEW*KEMSRE Trigger: TTCCCGAGACATCTCCTTCCACCATTCCCCACTTCT...TGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTGGTGTGTTTGCTCTCTTGTTACCTGCATaGATACTTATAACCAAGATG | + |
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Preference number: 2 (lower is better) Translates to: AGDKHLGNLTRKSSGVFALLLPA*ILITKM Trigger: CATCTTGGTTATAAGTATGCATGCAGGTAACAAGAG...AGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | TCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCAGGCAAATGTCAGCTCTaGTTTCACTCTTGTTACCTG | + |
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Preference number: 2 (lower is better) Translates to: SPTTDPNKNSKVSLLGTAGKCQL*FHSCYL Trigger: CAGGTAACAAGAGTGAAAGCAGAGCTGACATTTGCC...TGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCCAACAACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTGGGACAGCAGATTTTAACTTTGAATaGGCCCTGAAAAACACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SPTTDPNKNSKVSLLGTADFNFE*ALKNTG Trigger: CCCTGTGTTTTTCAGGGCTCATTCAAAGTTAAAATC...TGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTTGTTGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CAA 90 bp | TCTGCTTGCCCTGACACATCTTCTTTTGGGAACTACAGTTTTGCTTaGAGATGGGAACACTGCATTTGTAGTGGGAATCCCTTATACTAC | + |
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Preference number: 2 (lower is better) Translates to: SACPDTSSFGNYSFA*RWEHCICSGNPLYY Trigger: GTAGTATAAGGGATTCCCACTACAAATGCAGTGTTCCCATCTCAAAGCAAAACTGTAGTTCCCAAAAGAAGATGTGTCAGGGCAAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR GCA 90 bp | CTTCTGTTTGTACAGCAAGCACCCTTACCATCTCTCAGCCCCAGAAACACTTTTAAGACATTTCATGATTaGAACACAGGACTCCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LLFVQQAPLPSLSPRNTFKTFHD*NTGLPY Trigger: GTAAGGGAGTCCTGTGTTGCAATCATGAAATGTCTT...AAAAGTGTTTCTGGGGCTGAGAGATGGTAAGGGTGCTTGCTGTACAAACAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAGGAAACAGGATTACTCCAGACACACTTGTAAATGTTGCTGGTTTCTACTTCACTCTTGTTACCTaGATGCATACTTATAACCAA | + |
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Preference number: 2 (lower is better) Translates to: LGGNRITPDTLVNVAGFYFTLVT*MHTYNQ Trigger: TTGGTTATAAGTATGCATGCAGGTAACAAGAGTGAA...GTAGAAACCAGCAACATTTACAAGTGTGTCTGGAGTAATCCTGTTTCCTCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 72 bp | CTACTCAGCCTCCCCAGGATTCCTGGGCTAGCACTGTaGGCAGGAGCGCAGCTCTGCCACCTCTCAGCACTG | + |
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Preference number: 3 (lower is better) Translates to: LLSLPRIPGLAL*AGAQLCHLSAL Trigger: CAGTGCTGAGAGGTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCTGAGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 72 bp | TGTGGGCAGGAGCGCAGCTCTGCCACCTCTCAGCACTaGGCCCATATGTCCAGTGTCCCTGCACTCGCAACC | + |
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Preference number: 3 (lower is better) Translates to: CGQERSSATSQH*AHMSSVPALAT Trigger: GGTTGCGAGTGCAGGGACACTGGACATATGGGCTCAGTGCTGAGAGGTGGCAGAGCTGCGCTCCTGCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR TCA 72 bp | TCCTCGGGATTCAGTGGGTCAGGTCTGAGTCCTGCATaGGGTCGTTGGAGCCTGGATACCAGGTGCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: SSGFSGSGLSPA*GRWSLDTRCQA Trigger: AGCCTGGCACCTGGTATCCAGGCTCCAACGACCTCATGCAGGACTCAGACCTGACCCACTGAATCCCGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR CCA 72 bp | TTCTTACTCATGTCTACTCAGCCTCCCCAGGATTCCTaGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: FLLMSTQPPQDS*ASTVGRSAALP Trigger: TGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCTGAGTAGACATGAGTAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR-3UTR CAA 90 bp | AGCCTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACCTGCCATATATGGAATaGTCAAACCAGATAGCATGG | + |
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Preference number: 3 (lower is better) Translates to: SLPRIPGLALWAGAQLCHLPYME*SNQIAW Trigger: CCATGCTATCTGGTTTGACAATTCCATATATGGCAG...GTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 72 bp | GAAGCTGACGGAGCATCAGGGAACCAGTCTCAGCTCTaGTACTCAAGAGCCAAGAGGCCTCGGCAACACACT | + |
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Preference number: 3 (lower is better) Translates to: EADGASGNQSQL*YSRAKRPRQHT Trigger: AGTGTGTTGCCGAGGCCTCTTGGCTCTTGAGTAGCAGAGCTGAGACTGGTTCCCTGATGCTCCGTCAGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| 3UTR GCA 72 bp | TCAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTaGAACGCTGGGCTTCCAGCATGTGTGGTCATGCCT | + |
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Preference number: 3 (lower is better) Translates to: SASSSDPLASSE*NAGLPACVVMP Trigger: AGGCATGACCACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| 3UTR CCA 72 bp | GTGTGCCAGCGAAGCAATGTAACTGTCAGAGGCAGGTaGTCTACCCTGGTCTGTCCCCAGTACCATGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VCQRSNVTVRGR*STLVCPQYHAL Trigger: CAAGGCATGGTACTGGGGACAGACCAGGGTAGACCACCTGCCTCTGACAGTTACATTGCTTCGCTGGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| 3UTR CCA 72 bp | CTAATGTCAGCACAAGATGACTGGCCACTACCGGGGTaGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LMSAQDDWPLPG*VPQGLGSGSTQ Trigger: TTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAGTCATCTTGTGCTGACATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| 3UTR GCA 72 bp | CCTGGGGAATCTGACCAGAAAGAGCTCTGGTGTGTTTaGTTCCCTGCCCTCTGCACTTCAGCTTTCGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: PGESDQKELWCV*FPALCTSAFDR Trigger: TCTGTCGAAAGCTGAAGTGCAGAGGGCAGGGAAGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR GCA 72 bp | GTACCAAATGCATGCCAAGGAGGAGCCATCTCTGTGTaGCAGCGAAGCAATGTAACTGTCAGAGGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPNACQGGAISV*QRSNVTVRGRW Trigger: CCACCTGCCTCTGACAGTTACATTGCTTCGCTGGCACACAGAGATGGCTCCTCCTTGGCATGCATTTGGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR CCA 72 bp | GAAGGGCAGCTCAGTGAGCTGACAGACAGTGAGAACTaGCGACATCTTTACACACGTCTACACTCACTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: EGQLSELTDSEN*RHLYTRLHSLA Trigger: GGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCTCACTGTCTGTCAGCTCACTGAGCTGCCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR CCA 72 bp | GGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTaGTGTGTTTGCTTCCCTGCCCTCTGCACTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GQTPGESDQKEL*CVCFPALCTSA Trigger: AGCTGAAGTGCAGAGGGCAGGGAAGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR CCA 72 bp | AGCATCCCAAGCTTCACAATACGGACCAGGCTTGGCTaGGGACAAACACCTGGGGAATCTGACCAGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SIPSFTIRTRLG*GQTPGESDQKE Trigger: CTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGCCAAGCCTGGTCCGTATTGTGAAGCTTGGGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR TCA 72 bp | GCTCAAGGACCATGGATGAAGGGCAGCTCAGTGAGCTaGCAGACAGTGAGAACTGGCGACATCTTTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: AQGPWMKGSSVS*QTVRTGDIFTH Trigger: GTGTGTAAAGATGTCGCCAGTTCTCACTGTCTGTCAGCTCACTGAGCTGCCCTTCATCCATGGTCCTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR GCA 72 bp | TGGCGACATCTTTACACACGTCTACACTCACTGGCCTaGTCCAGGAAAGCCTGGCAAATGTCAGCTCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: WRHLYTRLHSLA*SRKAWQMSALL Trigger: AAGCAGAGCTGACATTTGCCAGGCTTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR CCA 72 bp | AGAACTGGCGACATCTTTACACACGTCTACACTCACTaGCCTGCTCCAGGAAAGCCTGGCAAATGTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTGDIFTHVYTH*PAPGKPGKCQL Trigger: GAGCTGACATTTGCCAGGCTTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCAACGCTGGGCTTCCAGCATGTGTGGTCATGCCTGCTTTTATGTGGGTGCCTGAGTGCTTGTTTTTaGGTATCTTGGCCAGAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SATLGFQHVWSCLLLCGCLSACF*VSWPEV Trigger: TACTTCTGGCCAAGATACCAAAAAACAAGCACTCAG...GCACCCACATAAAAGCAGGCATGACCACACATGCTGGAAGCCCAGCGTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR GCA 72 bp | AGTGAATGGGTGGAGCACCAAACTCAGTACAGAGTGTaGAAAGAGTCACAGGCAGGCACAGGAAAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SEWVEHQTQYRV*KESQAGTGKTE Trigger: TTCTGTCTTTCCTGTGCCTGCCTGTGACTCTTTGCACACTCTGTACTGAGTTTGGTGCTCCACCCATTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR GCA 72 bp | GAAACACTCCTCTTAACAGTTTACTCTAGTACCAAATaGATGCCAAGGAGGAGCCATCTCTGTGTGCCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ETLLLTVYSSTK*MPRRSHLCVPA Trigger: CGCTGGCACACAGAGATGGCTCCTCCTTGGCATGCATTTGGTACTAGAGTAAACTGTTAAGAGGAGTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR CCA 72 bp | AACAGATCCCAACAAGAACAGCAAAGTAAGCCTTCTTaGGACAGCATTGGCTCCAGCATCCCAAGCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: NRSQQEQQSKPS*DSIGSSIPSFT Trigger: TGTGAAGCTTGGGATGCTGGAGCCAATGCTGTCCCAAGAAGGCTTACTTTGCTGTTCTTGTTGGGATCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTCAACTTGTCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACTCGGCAACACACTTTTaGCCTGTTACCTTTCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LGQLVFPPNIPPSICLPHSATHF*PVTFLF Trigger: AAAAAGAAAGGTAACAGGCAAAAAGTGTGTTGCCGA...GTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGACAAGTTGACCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR TCA 72 bp | AGTCAGAAGACCACAGTGAGGAGAGAAGACATTTCATaGTTGCAACACAGGACTCCCTTACTGAGTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQKTTVRREDIS*LQHRTPLLSAC Trigger: ACAAGCACTCAGTAAGGGAGTCCTGTGTTGCAATCATGAAATGTCTTCTCTCCTCACTGTGGTCTTCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR TCA 72 bp | CCACATTCTGGCCTAAACTTCCCTTTCTGCTTGCCCTaGCACATCTTCTTTTGGGAACTACAGTTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PHSGLNFPFCLP*HIFFWELQFCF Trigger: AAAGCAAAACTGTAGTTCCCAAAAGAAGATGTGTCAGGGCAAGCAGAAAGGGAAGTTTAGGCCAGAATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | AGCCTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACTGGCCCTCACAGCTTTaGGAACAAAGTCCACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLPRIPGLALWAGAQLCHWPSQL*EQSPHQ Trigger: TTGATGTGGACTTTGTTCGCAAAGCTGTGAGGGCCA...GTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGAGCTCCGCCAGAACCTaGGCAATGTTGGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QQAPVILLPPLSATLGFQSSART*AMLAWD Trigger: ATCCCAAGCCAACATTGCTCAGGTTCTGGCGGAGCT...CTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | AGCCTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACTGTCACAGGGTCAGTTaGAAGAAGGCGCCAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPRIPGLALWAGAQLCHCHRVS*KKAPIY Trigger: ATATATTGGCGCCTTCTTTCAACTGACCCTGTGACA...GTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCCACCTTGAGAGGGAATaGCCTGAGGCTGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRWQKWGMVEGDVSGSHLERE*PEAAPG Trigger: ACCTGGAGCAGCCTCAGGTCATTCCCTCTCAAGGTG...GCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTCACCTTGAGAGGGAATaGCCTGAGGCTGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGGYRRVWVQALHNSTTSHLERE*PEAAPG Trigger: ACCTGGAGCAGCCTCAGGTCATTCCCTCTCAAGGTG...AGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CAGCGAAGCAATGTAACTGTCAGAGGCAGGTGGTCTACCCTGGTCTGTCCCCAGCACCTTGAGAGGGAATaGCCTGAGGCTGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSNVTVRGRWSTLVCPQHLERE*PEAAPG Trigger: ACCTGGAGCAGCCTCAGGTCATTCCCTCTCAAGGTG...CTGGGGACAGACCAGGGTAGACCACCTGCCTCTGACAGTTACATTGCTTCGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACAACCCCTGCAGGACCGGACTTCCTCCAATaGCCCCGCCAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFHPTYHHLSASHTTPAGPDFLQ*PRQGHC Trigger: GCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGG...TCCTGCAGGGGTTGTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGGTCATGCCTGGAAGGACTGTCCTACTaGCGGACTTCCTCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPPLSATLGFQHVWSCLEGLSY*RTSSNA Trigger: GGCATTGGAGGAAGTCCGGCAGTAGGACAGTCCTTC...CAGGCATGACCACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGACGTACTGTACTTCTaGCTCCCCAGACAGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: LATTGVGTAGFGFRLYTTDVLYF*LPRQQR Trigger: ACGTTGCTGTCTGGGGAGCCAGAAGTACAGTACGTC...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCCCCCAGACAGCAACGTaGCAAGTGGAGGTGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSRWQKWGMVEGDVSGSPQTAT*QVEVLT Trigger: AGTTAGCACCTCCACTTGTCACGTTGCTGTCTGGGG...GCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCTCCCCAGACAGCAACGTaGCAAGTGGAGGTGCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: RAAGGRSGEWWKEMSREAPQTAT*QVEVLT Trigger: AGTTAGCACCTCCACTTGTCACGTTGCTGTCTGGGG...AGCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCATATGCCCTTGGCGGTaGGTAAACGTCCCCGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVICPWR*VNVPEI Trigger: GATTTCGGGGACGTTTACTCACCGCCAAGGGCATAT...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCGCAGTTCACCACATCTaGGAAGAGAGAGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVAVHHI*EERAHV Trigger: GACGTGAGCTCTCTCTTCCCAGATGTGGTGAACTGC...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCGACGTACTGTACTTCTaGCTCCCCAGACAGCAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVDVLYF*LPRQQR Trigger: ACGTTGCTGTCTGGGGAGCCAGAAGTACAGTACGTC...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| 3UTR CAA 72 bp | GCTCCAGCATCCCAAGCTTCACAATACGGACCAGGCTaGGCTGGGGACAAACACCTGGGGAATCTGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: APASQASQYGPG*AGDKHLGNLTR Trigger: TCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGCCAAGCCTGGTCCGTATTGTGAAGCTTGGGATGCTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR CAA 72 bp | GTGAGGCTGTCTGATCAGCAAGCTCCAGTGATCCTCTaGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRLSDQQAPVIL*PPLSATLGFQH Trigger: ATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGATCAGACAGCCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCAGCTCCGCCAGAACCTaGGCAATGTTGGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGYRRVWVQALHNSTTSSSSART*AMLAWD Trigger: ATCCCAAGCCAACATTGCTCAGGTTCTGGCGGAGCT...GGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTACACAGCGTTCTGCTaGTTGCTCCACTTTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVYTAFC*LLHFDG Trigger: GCCATCAAAGTGGAGCAATCAGCAGAACGCTGTGTA...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTATATGCCCTTGGCGGTaGGTAAACGTCCCCGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RGGYRRVWVQALHNSTTSICPWR*VNVPEI Trigger: GATTTCGGGGACGTTTACTCACCGCCAAGGGCATAT...AGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTGAAGGACTGTCCTACTaGCGGACTTCCTCCAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLEGLSY*RTSSNA Trigger: GGCATTGGAGGAAGTCCGGCAGTAGGACAGTCCTTC...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | GCTGGGGACAAACACCTGGGGAATCTGACCAGAAAGAGCTCTGGTGTGTTTGCTAGCTCCGCCAGAACCTaGGCAATGTTGGCTTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGDKHLGNLTRKSSGVFASSART*AMLAWD Trigger: ATCCCAAGCCAACATTGCTCAGGTTCTGGCGGAGCT...AGCAAACACACCAGAGCTCTTTCTGGTCAGATTCCCCAGGTGTTTGTCCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | CTTTGTGAGATGGGCCTGCTGAGAGAATCTCCCTCCGCTCTGGAGCTCAAGGACTACACAGCGTTCTGCTaGTTGCTCCACTTTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCEMGLLRESPSALELKDYTAFC*LLHFDG Trigger: GCCATCAAAGTGGAGCAATCAGCAGAACGCTGTGTA...GTCCTTGAGCTCCAGAGCGGAGGGAGATTCTCTCAGCAGGCCCATCTCACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCTTTACTCGCTCACAGATaGTCTGAGCTTCCCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAAGGRSGEWWKEMSREALLAHR*SELPGH Trigger: ATGACCGGGAAGCTCAGAGCATCTGTGAGCGAGTAA...AGCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | CGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTTACTCGCTCACAGATaGTCTGAGCTTCCCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGYRRVWVQALHNSTTSLLAHR*SELPGH Trigger: ATGACCGGGAAGCTCAGAGCATCTGTGAGCGAGTAA...AGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTGGCCCTCACAGCTTTaGGAACAAAGTCCACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVWPSQL*EQSPHQ Trigger: TTGATGTGGACTTTGTTCGCAAAGCTGTGAGGGCCA...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGCAAAGTCTGTCATATaGTGCAGAGCTTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LATTGVGTAGFGFRLYTTAKSVI*CRALLV Trigger: CACCAACAAAGCTCTGCAGCATATGACAGACTTTGC...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGGTCATGCCTGCTTGCCTTACCGTATAATTaGGGTTTCCTGGCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPLSATLGFQHVWSCLLALPYN*GFLAGS Trigger: GGATCCAGCCAGGAAACCCCAATTATACGGTAAGGC...AAGCAGGCATGACCACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR CAA 72 bp | GCCAGGGCCATCAGTGGATCTCCGCTAAGACTGTGTTaGATGAGGGTCAGTCGCCCTTTCTACTCAGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARAISGSPLRLC*MRVSRPFYSVF Trigger: GAACACTGAGTAGAAAGGGCGACTGACCCTCATCAAACACAGTCTTAGCGGAGATCCACTGATGGCCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGGCTGTCTGATCAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTTACACAGCGTTCTGCTaGTTGCTCCACTTTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRLSDQQAPVILLPPLSYTAFC*LLHFDG Trigger: GCCATCAAAGTGGAGCAATCAGCAGAACGCTGTGTA...ACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGATCAGACAGCCTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCTTGGGTGCTTTCGTCATaGAAACCTTCCAGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAAGGRSGEWWKEMSREAWVLSS*KPSRKL Trigger: GAGTTTCCTGGAAGGTTTTCATGACGAAAGCACCCA...AGCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTGTCACAGGGTCAGTTaGAAGAAGGCGCCAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVCHRVS*KKAPIY Trigger: ATATATTGGCGCCTTCTTTCAACTGACCCTGTGACA...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCATCCTTCAAGCACTTaGGGAGGGGTTCACAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLHPSST*GGVHRD Trigger: ATCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATG...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | GGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCCATCCTTCAAGCACTTaGGGAGGGGTTCACAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGYRRVWVQALHNSTTSSHPSST*GGVHRD Trigger: ATCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATG...GGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCAGCGAAGCAATGTAACTGTCAGAGGCAGGTGGTCTACCCTGGTCTGTTTACTCGCTCACAGATaGTCTGAGCTTCCCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VCQRSNVTVRGRWSTLVCLLAHR*SELPGH Trigger: ATGACCGGGAAGCTCAGAGCATCTGTGAGCGAGTAA...ACAGACCAGGGTAGACCACCTGCCTCTGACAGTTACATTGCTTCGCTGGCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | TCTGATCAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTGGCCCTCACAGCTTTaGGAACAAAGTCCACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: SDQQAPVILLPPLSATLGWPSQL*EQSPHQ Trigger: TTGATGTGGACTTTGTTCGCAAAGCTGTGAGGGCCA...GCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCAGCGTTCTGCTGATTaGTCCACTTTGATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLQRSAD*STLMAH Trigger: GTGTGCCATCAAAGTGGAGCAATCAGCAGAACGCTG...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAAAGTCTGTCATATGCTaGAGAGCTTTGTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LATTGVGTAGFGFRLYTTKSVIC*RALLVK Trigger: CTTCACCAACAAAGCTCTGCAGCATATGACAGACTT...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | GTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCAGCAGTTCACCACATCTaGGAAGAGAGAGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGTAGFGFRLYTTVQRLPAVHHI*EERAHV Trigger: GACGTGAGCTCTCTCTTCCCAGATGTGGTGAACTGC...TGGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGGTCATGCCTCCATCTCACACATTCTaGGAAAGGCCTTACCGTATA | + |
|
Preference number: 4 (lower is better) Translates to: PLASSECNAGLPACVVMPPSHTF*ERPYRI Trigger: TATACGGTAAGGCCTTTCCCAGAATGTGTGAGATGG...AGGCATGACCACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTTCCAGGTTGTCAGTCTaGATGCAGTTCACCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLSRLSV*MQFTTS Trigger: AGATGTGGTGAACTGCATGCAGACTGACAACCTGGA...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | TCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACAACCCCTGCAGGACAGCGTTCTGCTGATTaGTCCACTTTGATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SFHPTYHHLSASHTTPAGQRSAD*STLMAH Trigger: GTGTGCCATCAAAGTGGAGCAATCAGCAGAACGCTG...TCCTGCAGGGGTTGTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCTGCAAAGTCTGTCATATaGTGCAGAGCTTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RAAGGRSGEWWKEMSREAAKSVI*CRALLV Trigger: CACCAACAAAGCTCTGCAGCATATGACAGACTTTGC...AGCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAGCTCAAGGACCATGGATGAAGGGCAGCTCAGTGAGCTGACAGACAGTCCACATCAACTTCAGTaGCATATTCCTTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LWSSRTMDEGQLSELTDSPHQLQ*HIPSAP Trigger: CGGAGCTGAAGGAATATGCCACTGAAGTTGATGTGG...ACTGTCTGTCAGCTCACTGAGCTGCCCTTCATCCATGGTCCTTGAGCTCCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCACATCAACTTCAGTaGCATATTCCTTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLPHQLQ*HIPSAP Trigger: CGGAGCTGAAGGAATATGCCACTGAAGTTGATGTGG...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAAGCTTATTGATATTCTaGGGGTTCAGATCAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LATTGVGTAGFGFRLYTTSLLIF*GFRSSK Trigger: CTTACTTGATCTGAACCCTCAGAATATCAATAAGCT...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | TGCATGCCAAGGAGGAGCCATCTCTGTGTGCCAGCGAAGCAATGTAACTGTCAGTCCAGGTTGTCAGTCTaGATGCAGTTCACCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CMPRRSHLCVPAKQCNCQSRLSV*MQFTTS Trigger: AGATGTGGTGAACTGCATGCAGACTGACAACCTGGA...CTGACAGTTACATTGCTTCGCTGGCACACAGAGATGGCTCCTCCTTGGCATGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTGTAAGTCAGAAGACCACAGTGAGGAGAGAAGACATTTCATGATTGCACCGGACTTCCTCCAATaGCCCCGCCAAGGTCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: MPCKSEDHSEERRHFMIAPDFLQ*PRQGHC Trigger: GCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGG...TGCAATCATGAAATGTCTTCTCTCCTCACTGTGGTCTTCTGACTTACAAGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCAAGTCTGTCATATGCTaGAGAGCTTTGTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KSSRWQKWGMVEGDVSGSKSVIC*RALLVK Trigger: CTTCACCAACAAAGCTCTGCAGCATATGACAGACTT...GCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | TCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGAAGTCTGTCATATGCTaGAGAGCTTTGTTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSDPLASSECNAGLPACVKSVIC*RALLVK Trigger: CTTCACCAACAAAGCTCTGCAGCATATGACAGACTT...CACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | GAGAACTGGCGACATCTTTACACACGTCTACACTCACTGGCCTGCTCCAGGAAATGGGTGCTTTCGTCATaGAAACCTTCCAGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: ENWRHLYTRLHSLACSRKWVLSS*KPSRKL Trigger: GAGTTTCCTGGAAGGTTTTCATGACGAAAGCACCCA...TTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | GAGAACTGGCGACATCTTTACACACGTCTACACTCACTGGCCTGCTCCAGGAAATCCAGGTTGTCAGTCTaGATGCAGTTCACCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: ENWRHLYTRLHSLACSRKSRLSV*MQFTTS Trigger: AGATGTGGTGAACTGCATGCAGACTGACAACCTGGA...TTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTAATGTTGGCTTGGGATaGAAGACGAATCATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLNVGLG*KTNHDV Trigger: GACATCATGATTCGTCTTGCATCCCAAGCCAACATT...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | AGGCTGTCTGATCAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGAATGTTGGCTTGGGATaGAAGACGAATCATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLSDQQAPVILLPPLSATNVGLG*KTNHDV Trigger: GACATCATGATTCGTCTTGCATCCCAAGCCAACATT...CGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGATCAGACAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | CAGCGAAGCAATGTAACTGTCAGAGGCAGGTGGTCTACCCTGGTCTGTCCCCAGATGCAAGACGAATCATaGTGTCTAACTTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRSNVTVRGRWSTLVCPQMQDES*CLTSLV Trigger: AACTAGAGAAGTTAGACATCATGATTCGTCTTGCAT...CTGGGGACAGACCAGGGTAGACCACCTGCCTCTGACAGTTACATTGCTTCGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCATTTCAGGCCTTTTCTaGACAATTAGGTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSSRWQKWGMVEGDVSGSISGLF*TIRLMF Trigger: GAACATCAACCTAATTGTCCAGAAAAGGCCTGAAAT...GCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTATGCAAGACGAATCATaGTGTCTAACTTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLMQDES*CLTSLV Trigger: AACTAGAGAAGTTAGACATCATGATTCGTCTTGCAT...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR GCA 90 bp | GAGAACTGGCGACATCTTTACACACGTCTACACTCACTGGCCTGCTCCAGGAAAAATGTTGGCTTGGGATaGAAGACGAATCATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENWRHLYTRLHSLACSRKNVGLG*KTNHDV Trigger: GACATCATGATTCGTCTTGCATCCCAAGCCAACATT...TTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR GCA 90 bp | CACCTTTCTTTTCCTAGGACTGCAGGTGTGATCATGATGCCAGCTAGAAACACTCAGCGTTCTGCTGATTaGTCCACTTTGATGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSFPRTAGVIMMPARNTQRSAD*STLMAH Trigger: GTGTGCCATCAAAGTGGAGCAATCAGCAGAACGCTG...AGTGTTTCTAGCTGGCATCATGATCACACCTGCAGTCCTAGGAAAAGAAAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACTATGAAGTTCTGGCTAGCCTCCAATCCACAGCTATCCACCTTTCTTTTGCAGTTCACCACATCTaGGAAGAGAGAGCTCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: LNYEVLASLQSTAIHLSFAVHHI*EERAHV Trigger: GACGTGAGCTCTCTCTTCCCAGATGTGGTGAACTGC...AAAAGAAAGGTGGATAGCTGTGGATTGGAGGCTAGCCAGAACTTCATAGTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTATTTCAGGCCTTTTCTaGACAATTAGGTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLISGLF*TIRLMF Trigger: GAACATCAACCTAATTGTCCAGAAAAGGCCTGAAAT...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR CCA 90 bp | CAGCGAAGCAATGTAACTGTCAGAGGCAGGTGGTCTACCCTGGTCTGTCCCCAGTACTTTCATACTTGTTaGGGTATTTTCGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRSNVTVRGRWSTLVCPQYFHTC*GIFGRC Trigger: ACATCTTCCGAAAATACCCCAACAAGTATGAAAGTA...CTGGGGACAGACCAGGGTAGACCACCTGCCTCTGACAGTTACATTGCTTCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCAATGCAAGACGAATCATaGTGTCTAACTTCTCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGTAGFGFRLYTTVQRLPMQDES*CLTSLV Trigger: AACTAGAGAAGTTAGACATCATGATTCGTCTTGCAT...TGGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTTTGTACAGCAAGCACCCTTACCATCTCTCAGCCCCAGAAACACTTTTTGGGTGCTTTCGTCATaGAAACCTTCCAGGAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: LLFVQQAPLPSLSPRNTFWVLSS*KPSRKL Trigger: GAGTTTCCTGGAAGGTTTTCATGACGAAAGCACCCA...AAAAGTGTTTCTGGGGCTGAGAGATGGTAAGGGTGCTTGCTGTACAAACAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | CTAGAAACACTCCTCTTAACAGTTTACTCTAGTACCAAATGCATGCCAAGGAGGATATGCCCTTGGCGGTaGGTAAACGTCCCCGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LETLLLTVYSSTKCMPRRICPWR*VNVPEI Trigger: GATTTCGGGGACGTTTACTCACCGCCAAGGGCATAT...CCTCCTTGGCATGCATTTGGTACTAGAGTAAACTGTTAAGAGGAGTGTTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTTACTTTCATACTTGTTaGGGTATTTTCGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLYFHTC*GIFGRC Trigger: ACATCTTCCGAAAATACCCCAACAAGTATGAAAGTA...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
||
| CDS-3UTR TCA 90 bp | CTTCTGTTTGTACAGCAAGCACCCTTACCATCTCTCAGCCCCAGAAACACTTTTTGTCACAGGGTCAGTTaGAAGAAGGCGCCAATATAT | + |
|
Preference number: 4 (lower is better) Translates to: LLFVQQAPLPSLSPRNTFCHRVS*KKAPIY Trigger: ATATATTGGCGCCTTCTTTCAACTGACCCTGTGACA...AAAAGTGTTTCTGGGGCTGAGAGATGGTAAGGGTGCTTGCTGTACAAACAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTGTTTGTACAGCAAGCACCCTTACCATCTCTCAGCCCCAGAAACACTTTTGCAAAGTCTGTCATATaGTGCAGAGCTTTGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFVQQAPLPSLSPRNTFAKSVI*CRALLV Trigger: CACCAACAAAGCTCTGCAGCATATGACAGACTTTGC...AAAAGTGTTTCTGGGGCTGAGAGATGGTAAGGGTGCTTGCTGTACAAACAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR CAA 72 bp | TTGCAACACAGGACTCCCTTACTGAGTGCTTGTTTTTaGGTATCTTGGCCAGAAGTACTTCTCCAGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQHRTPLLSACF*VSWPEVLLQVS Trigger: AGAGACCTGGAGAAGTACTTCTGGCCAAGATACCAAAAAACAAGCACTCAGTAAGGGAGTCCTGTGTTGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAAACACTCCTCTTAACAGTTTACTCTAGTACCAAATGCATGCCAAGGAGGCCACATCAACTTCAGTaGCATATTCCTTCAGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LETLLLTVYSSTKCMPRRPHQLQ*HIPSAP Trigger: CGGAGCTGAAGGAATATGCCACTGAAGTTGATGTGG...CCTCCTTGGCATGCATTTGGTACTAGAGTAAACTGTTAAGAGGAGTGTTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| 3UTR CAA 72 bp | CCTGACACATCTTCTTTTGGGAACTACAGTTTTGCTTaGAGATGGGAACACTGCATTTGTAGTGGGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PDTSSFGNYSFA*RWEHCICSGNP Trigger: GGGATTCCCACTACAAATGCAGTGTTCCCATCTCAAAGCAAAACTGTAGTTCCCAAAAGAAGATGTGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR CCA 90 bp | CTTGGTCAACTTGTCTTTCCACCCAACATACCACCATCTATCTGCCTCCCACACTACTTTCATACTTGTTaGGGTATTTTCGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQLVFPPNIPPSICLPHYFHTC*GIFGRC Trigger: ACATCTTCCGAAAATACCCCAACAAGTATGAAAGTA...GTGTGGGAGGCAGATAGATGGTGGTATGTTGGGTGGAAAGACAAGTTGACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| 3UTR CAA 72 bp | AGGAAAGCCTGGCAAATGTCAGCTCTGCTTTCACTCTaGTTACCTGCATGCATACTTATAACCAAGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKAWQMSALLSL*LPACILITKMS Trigger: TGACATCTTGGTTATAAGTATGCATGCAGGTAACAAGAGTGAAAGCAGAGCTGACATTTGCCAGGCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR CCA 90 bp | ATCCACCTTTCTTTTCCTAGGACTGCAGGTGTGATCATGATGCCAGCTAGAAACATTTCAGGCCTTTTCTaGACAATTAGGTTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHLSFPRTAGVIMMPARNISGLF*TIRLMF Trigger: GAACATCAACCTAATTGTCCAGAAAAGGCCTGAAAT...GTTTCTAGCTGGCATCATGATCACACCTGCAGTCCTAGGAAAAGAAAGGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGGAAACAGGATTACTCCAGACACACTTGTAAATGTTGCTGGTTTCTACAGCTTATTGATATTCTaGGGGTTCAGATCAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGGNRITPDTLVNVAGFYSLLIF*GFRSSK Trigger: CTTACTTGATCTGAACCCTCAGAATATCAATAAGCT...GTAGAAACCAGCAACATTTACAAGTGTGTCTGGAGTAATCCTGTTTCCTCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR TCA 90 bp | CTAGAAACACTCCTCTTAACAGTTTACTCTAGTACCAAATGCATGCCAAGGAGGAGCTTATTGATATTCTaGGGGTTCAGATCAAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LETLLLTVYSSTKCMPRRSLLIF*GFRSSK Trigger: CTTACTTGATCTGAACCCTCAGAATATCAATAAGCT...CCTCCTTGGCATGCATTTGGTACTAGAGTAAACTGTTAAGAGGAGTGTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACAGATACTCTGTAATCTaGTCCACCCGGATGCATCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLPRIPGLALWAGAQLCHRYSVI*STRMHP Trigger: GGGATGCATCCGGGTGGACAAGATTACAGAGTATCT...GTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
||
| CDS-3UTR CAA 90 bp | AGCCTCCCCAGGATTCCTGGGCTAGCACTGTGGGCAGGAGCGCAGCTCTGCCACGACAACACCACTTCTTaGGCTGTCACAGGGTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLPRIPGLALWAGAQLCHDNTTS*AVTGSV Trigger: AACTGACCCTGTGACAGCCAAAGAAGTGGTGTTGTC...GTGGCAGAGCTGCGCTCCTGCCCACAGTGCTAGCCCAGGAATCCTGGGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| CDS-3UTR CAA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACACCCCAGAAGGTCACCTaGAGAGGGAATGACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LATTGVGTAGFGFRLYTTPQKVT*RGNDLR Trigger: CCTCAGGTCATTCCCTCTCAAGGTGACCTTCTGGGG...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | CTTTGTGAGATGGGCCTGCTGAGAGAATCTCCCTCCGCTCTGGAGCTCAAGGACCCCCAGAAGGTCACCTaGAGAGGGAATGACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LCEMGLLRESPSALELKDPQKVT*RGNDLR Trigger: CCTCAGGTCATTCCCTCTCAAGGTGACCTTCTGGGG...GTCCTTGAGCTCCAGAGCGGAGGGAGATTCTCTCAGCAGGCCCATCTCACAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| CDS-3UTR CAA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGACAACACCACTTCTTaGGCTGTCACAGGGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LATTGVGTAGFGFRLYTTDNTTS*AVTGSV Trigger: AACTGACCCTGTGACAGCCAAAGAAGTGGTGTTGTC...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | AGGCTGTCTGATCAGCAAGCTCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCCCCAGAAGGTCACCTaGAGAGGGAATGACCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RLSDQQAPVILLPPLSATPQKVT*RGNDLR Trigger: CCTCAGGTCATTCCCTCTCAAGGTGACCTTCTGGGG...CGTTGCACTCAGAGGAGGCAAGAGGATCACTGGAGCTTGCTGATCAGACAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS-3UTR CAA 90 bp | AGAGCAGCAGGTGGCAGAAGTGGGGAATGGTGGAAGGAGATGTCTCGGGAAGCTTCATCCTTCAAGCACTaGCGGAGGGGTTCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: RAAGGRSGEWWKEMSREASSFKH*RRGSQR Trigger: TCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATGA...AGCTTCCCGAGACATCTCCTTCCACCATTCCCCACTTCTGCCACCTGCTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | CTGGCCACTACCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACACTGTCACAGGGTCAGTaGAAAGAAGGCGCCAATATA | + |
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Preference number: 5 (lower is better) Translates to: LATTGVGTAGFGFRLYTTLSQGQ*KEGANI Trigger: TATATTGGCGCCTTCTTTCAACTGACCCTGTGACAG...TGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGGTAGTGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | TCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGGACAACACCACTTCTTaGGCTGTCACAGGGTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: SSDPLASSECNAGLPACVDNTTS*AVTGSV Trigger: AACTGACCCTGTGACAGCCAAAGAAGTGGTGTTGTC...CACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS-3UTR CAA 90 bp | GGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTAGATACTCTGTAATCTaGTCCACCCGGATGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: GVGTAGFGFRLYTTVQRLRYSVI*STRMHP Trigger: GGGATGCATCCGGGTGGACAAGATTACAGAGTATCT...AAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | GTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCATCATCCTTCAAGCACTaGCGGAGGGGTTCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VGTAGFGFRLYTTVQRLPSSFKH*RRGSQR Trigger: TCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATGA...TGGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | TCCAGTGATCCTCTTGCCTCCTCTGAGTGCAACGCTGGGCTTCCAGCATGTGTGCTGTCACAGGGTCAGTaGAAAGAAGGCGCCAATATA | + |
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Preference number: 5 (lower is better) Translates to: SSDPLASSECNAGLPACVLSQGQ*KEGANI Trigger: TATATTGGCGCCTTCTTTCAACTGACCCTGTGACAG...CACACATGCTGGAAGCCCAGCGTTGCACTCAGAGGAGGCAAGAGGATCACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS-3UTR CAA 90 bp | CGCCCCAGCAGGGGCCAGGGCCATCAGTGGATCTCCGCTAAGACTGTGTTTGATATTTCTCCCTTCTTATaGGTTGTGAAGTACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RPSRGQGHQWISAKTVFDISPFL*VVKYLE Trigger: CTCCAAGTACTTCACAACCAATAAGAAGGGAGAAAT...ATCAAACACAGTCTTAGCGGAGATCCACTGATGGCCCTGGCCCCTGCTGGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| CDS-3UTR CAA 90 bp | CCGGGGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCATTTCTCCCTTCTTATaGGTTGTGAAGTACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PGWVPQGLGSGSTQQYNVISPFL*VVKYLE Trigger: CTCCAAGTACTTCACAACCAATAAGAAGGGAGAAAT...GACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | ACTGGCGACATCTTTACACACGTCTACACTCACTGGCCTGCTCCAGGAAAGCCTCTGTCACAGGGTCAGTaGAAAGAAGGCGCCAATATA | + |
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Preference number: 5 (lower is better) Translates to: TGDIFTHVYTHWPAPGKPLSQGQ*KEGANI Trigger: TATATTGGCGCCTTCTTTCAACTGACCCTGTGACAG...AGGCTTTCCTGGAGCAGGCCAGTGAGTGTAGACGTGTGTAAAGATGTCGCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018875.13 |
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| CDS-3UTR CAA 90 bp | GAAGACCACAGTGAGGAGAGAAGACATTTCATGATTGCAACACAGGACTCCCTTTCATCCTTCAAGCACTaGCGGAGGGGTTCACAGAGA | + |
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Preference number: 5 (lower is better) Translates to: EDHSEERRHFMIATQDSLSSFKH*RRGSQR Trigger: TCTCTGTGAACCCCTCCGCAAGTGCTTGAAGGATGA...AAGGGAGTCCTGTGTTGCAATCATGAAATGTCTTCTCTCCTCACTGTGGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS-3UTR CAA 90 bp | GGTGGGTACCGCAGGGTTTGGGTTCAGGCTCTACACAACAGTACAACGTCTTCCATACTTTCATACTTGTaGGGGTATTTTCGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: GGYRRVWVQALHNSTTSSILSYL*GYFRKM Trigger: CATCTTCCGAAAATACCCCAACAAGTATGAAAGTAT...GGAAGACGTTGTACTGTTGTGTAGAGCCTGAACCCAAACCCTGCGGTACCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018875.13 ENSMUST00000065692.14 |
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| CDS-3UTR CAA 90 bp | CAATCCACAGCTATCCACCTTTCTTTTCCTAGGACTGCAGGTGTGATCATGATGATTTCTCCCTTCTTATaGGTTGTGAAGTACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QSTAIHLSFPRTAGVIMMISPFL*VVKYLE Trigger: CTCCAAGTACTTCACAACCAATAAGAAGGGAGAAAT...CATCATGATCACACCTGCAGTCCTAGGAAAAGAAAGGTGGATAGCTGTGGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS-3UTR CAA 90 bp | ACCATGCCTTGTAAGTCAGAAGACCACAGTGAGGAGAGAAGACATTTCATGATTATACTTTCATACTTGTaGGGGTATTTTCGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: TMPCKSEDHSEERRHFMIILSYL*GYFRKM Trigger: CATCTTCCGAAAATACCCCAACAAGTATGAAAGTAT...AATCATGAAATGTCTTCTCTCCTCACTGTGGTCTTCTGACTTACAAGGCATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176430.8 |
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| CDS TCA 72 bp | GTGAAGGAGCGAAGGTCGCAGGCACTGATGACGGGATaGAGGACTGTCCTACTGCCGGACTTCCTCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: VKERRSQALMTG*RTVLLPDFLQC Trigger: GCATTGGAGGAAGTCCGGCAGTAGGACAGTCCTTCATCCCGTCATCAGTGCCTGCGACCTTCGCTCCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000018875.13 ENSMUST00000176430.8 ENSMUST00000176523.2 |
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| CDS TCA 72 bp | GTGAAGGAGCGAAGGTCGCAGGCACTGATGACGGGATaGAGGACTGTCCTACCAGGCTATCCAGTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VKERRSQALMTG*RTVLPGYPVLL Trigger: GAGGAGGACTGGATAGCCTGGTAGGACAGTCCTTCATCCCGTCATCAGTGCCTGCGACCTTCGCTCCTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065692.14 |
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| CDS GCA 72 bp | CTGCCGGACTTCCTCCAATGCCCCCGCCAAGGTCACTaGCAAGCAGGCTATCCAGTCCTCCTCCTAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: LPDFLQCPRQGH*QAGYPVLLLKD Trigger: ATCTTTTAGGAGGAGGACTGGATAGCCTGCTTGGCAGTGACCTTGGCGGGGGCATTGGAGGAAGTCCGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000018875.13 ENSMUST00000176430.8 ENSMUST00000176523.2 |
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