RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP2A2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002957

Ensembl transcript IDs: ENSMUST00000003038.12

Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGCTGGGACATTACTaGTACAGACACCATCACTGGGCAGCACGTGGTACACAAGCCACA +
Preference number: 1 (lower is better)
Translates to: RVGLCPSSSRGLGHY*YRHHHWAARGTQAT
Trigger: TGTGGCTTGTGTACCACGTGCTGCCCAGTGATGGTGTCTGTATCAGTAATGTCCCAGCCCACGGGAGCTGCTGGGGCACAGGCCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 90 bp CGGAAACTACCTGCCTGGGCTATACAGAGTGGGGCTGCGGGAGCTTaGGTAGTTAGAGCCCTGCTGCAGTCCTCAAACCCACATGGCAGG +
Preference number: 1 (lower is better)
Translates to: RKLPAWAIQSGAAGA*VVRALLQSSNPHGR
Trigger: CCTGCCATGTGGGTTTGAGGACTGCAGCAGGGCTCTAACTACTCAAGCTCCCGCAGCCCCACTCTGTATAGCCCAGGCAGGTAGTTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 90 bp CCATCACTGGGCAGCACGTGGTACACAAGCCACAGCCACACAGGTTaGGCTACCCACGTGGTCCATGCAATACTGCGTGGACTGCACACA +
Preference number: 1 (lower is better)
Translates to: PSLGSTWYTSHSHTG*ATHVVHAILRGLHT
Trigger: TGTGTGCAGTCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCTGTGTGGCTGTGGCTTGTGTACCACGTGCTGCCCAGTGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 90 bp CAGCCACACAGGTTGAGCTACCCACGTGGTCCATGCAATACTGCGTaGACTGCACACAATGGACAGCTACGGAGCAAGGGGATTCGGAGG +
Preference number: 1 (lower is better)
Translates to: QPHRLSYPRGPCNTA*TAHNGQLRSKGIRR
Trigger: CCTCCGAATCCCCTTGCTCCGTAGCTGTCCATTGTGTGCAGTCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCTGTGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 90 bp GCAATCCTGGGCATTACTGCAAGACATAGTGCAAGGCCCCAAGCCTaGGCTCCTGACGCTGCCTATGTTCTTCCCCTGATGGGCCGTACA +
Preference number: 1 (lower is better)
Translates to: AILGITARHSARPQA*APDAAYVLPLMGRT
Trigger: TGTACGGCCCATCAGGGGAAGAACATAGGCAGCGTCAGGAGCTCAGGCTTGGGGCCTTGCACTATGTCTTGCAGTAATGCCCAGGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 90 bp CAAGGCCCCAAGCCTGAGCTCCTGACGCTGCCTATGTTCTTCCCCTaGTGGGCCGTACATACAGTCCAATGCCCACAAAGGGTTAAATGG +
Preference number: 1 (lower is better)
Translates to: QGPKPELLTLPMFFP*WAVHTVQCPQRVKW
Trigger: CCATTTAACCCTTTGTGGGCATTGGACTGTATGTACGGCCCATCAGGGGAAGAACATAGGCAGCGTCAGGAGCTCAGGCTTGGGGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 90 bp GTACACAAGCCACAGCCACACAGGTTGAGCTACCCACGTGGTCCATaGAATACTGCGTGGACTGCACACAATGGACAGCTACGGAGCAAG +
Preference number: 1 (lower is better)
Translates to: VHKPQPHRLSYPRGP*NTAWTAHNGQLRSK
Trigger: CTTGCTCCGTAGCTGTCCATTGTGTGCAGTCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCTGTGTGGCTGTGGCTTGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 90 bp GCCATGCGTGGGGCATGGAGTTTCAAACAGTTATACACCAGGCAGTaGTCCAGCAAACTCCATGGACACTGCCTAGCCCATGAGGTCACA +
Preference number: 1 (lower is better)
Translates to: AMRGAWSFKQLYTRQ*SSKLHGHCLAHEVT
Trigger: TGTGACCTCATGGGCTAGGCAGTGTCCATGGAGTTTGCTGGAGCACTGCCTGGTGTATAACTGTTTGAAACTCCATGCCCCACGCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 90 bp CCATCCAGCAGAGCCACGCAGCCCTGGGTTAACCCTAAAAGCACATaGCGCTGTTTCTGGATTCTGAGATTGAGCCAGTGGCATTTTAAT +
Preference number: 1 (lower is better)
Translates to: PSSRATQPWVNPKST*RCFWILRLSQWHFN
Trigger: ATTAAAATGCCACTGGCTCAATCTCAGAATCCAGAAACAGCGCCATGTGCTTTTAGGGTTAACCCAGGGCTGCGTGGCTCTGCTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR GCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGTTGACGGGGCAGGCCTaGTGCAGCCCTTCTCAAACT +
Preference number: 2 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWLTGQA*CSPSQT
Trigger: AGTTTGAGAAGGGCTGCAGCAGGCCTGCCCCGTCAA...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR GCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGTCTCAAACTGAGTCCTaGATTCCCTCCACACCCAGG +
Preference number: 2 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWSQTES*IPSTPR
Trigger: CCTGGGTGTGGAGGGAATGCAGGACTCAGTTTGAGA...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGACATGGCGCTGTTTCTaGATTCTGAGATTGAGCCAG +
Preference number: 2 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWTWRCF*ILRLSQ
Trigger: CTGGCTCAATCTCAGAATCCAGAAACAGCGCCATGT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR GCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGTACATACAGTCCAATaGCCACAAAGGGTTAAATGG +
Preference number: 2 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWVHTVQ*PQRVKW
Trigger: CCATTTAACCCTTTGTGGGCATTGGACTGTATGTAC...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCTGGAGGTGCCGTGAATaGCAGTTTTCAGACAAGGGG +
Preference number: 2 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVWRCRE*QFSDKG
Trigger: CCCCTTGTCTGAAAACTGCCATTCACGGCACCTCCA...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR GCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGAATTGCCCACCATGCTaGAAACCTAAGATCTCAAAA +
Preference number: 2 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWNCPPC*KPKISK
Trigger: TTTTGAGATCTTAGGTTTGCAGCATGGTGGGCAATT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CAA 90 bp CTGCACACAATGGACAGCTACGGAGCAAGGGGATTCGGAGGCTCATaGTGGCCACAGCTAGATCATCTGGAACCTAAGCCTGTGCCATGG +
Preference number: 2 (lower is better)
Translates to: LHTMDSYGARGFGGS*WPQLDHLEPKPVPW
Trigger: CCATGGCACAGGCTTAGGTTCCAGATGATCTAGCTGTGGCCACAATGAGCCTCCGAATCCCCTTGCTCCGTAGCTGTCCATTGTGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR GCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCACGGGACCCTGCCATaGGTGGGGCATGGAGTTTCA +
Preference number: 2 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDHGTLP*VGHGVS
Trigger: TGAAACTCCATGCCCCACGCATGGCAGGGTCCCGTG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCAACCCTAAAAGCACATaGCGCTGTTTCTGGATTCTG +
Preference number: 2 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVNPKST*RCFWIL
Trigger: CAGAATCCAGAAACAGCGCCATGTGCTTTTAGGGTT...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTGTTTATCTGCAGTGTaGTACAAAGACAAACGAGAG +
Preference number: 2 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLCLSAV*YKDKRE
Trigger: CTCTCGTTTGTCTTTGTACCACACTGCAGATAAACA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR TCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAAAAAACAAAGATGGGTaGTATCCATGTCTTCCAAAG +
Preference number: 2 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTKNKDG*YPCLPK
Trigger: CTTTGGAAGACATGGATATCACCCATCTTTGTTTTT...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 72 bp GGGCAGGCCTGCTGCAGCCCTTCTCAAACTGAGTCCTaGATTCCCTCCACACCCAGGGGCTGGCTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GQACCSPSQTES*IPSTPRGWLWA
Trigger: TGCCCACAGCCAGCCCCTGGGTGTGGAGGGAATGCAGGACTCAGTTTGAGAAGGGCTGCAGCAGGCCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CAA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGCTCAGGCACCCTTCTTaGACGGGGCAGGCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLLRHPS*TGQACC
Trigger: GCAGCAGGCCTGCCCCGTCAAAGAAGGGTGCCTGAG...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp TTTGACGGGGCAGGCCTGCTGCAGCCCTTCTCAAACTaGGTCCTGCATTCCCTCCACACCCAGGGGCTGGCT +
Preference number: 3 (lower is better)
Translates to: FDGAGLLQPFSN*VLHSLHTQGLA
Trigger: AGCCAGCCCCTGGGTGTGGAGGGAATGCAGGACTCAGTTTGAGAAGGGCTGCAGCAGGCCTGCCCCGTCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 72 bp CCCAGGCTCAGGCACCCTTCTTTGACGGGGCAGGCCTaGTGCAGCCCTTCTCAAACTGAGTCCTGCATTCCC +
Preference number: 3 (lower is better)
Translates to: PRLRHPSLTGQA*CSPSQTESCIP
Trigger: GGGAATGCAGGACTCAGTTTGAGAAGGGCTGCAGCAGGCCTGCCCCGTCAAAGAAGGGTGCCTGAGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 72 bp GGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGCTaGGACATTACTGATACAGACACCATCACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GEWACAPAAPVG*DITDTDTITGQ
Trigger: CTGCCCAGTGATGGTGTCTGTATCAGTAATGTCCCAGCCCACGGGAGCTGCTGGGGCACAGGCCCACTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp GACTGCCCTGATTTCCCAGGCTCAGGCACCCTTCTTTaGCGGGGCAGGCCTGCTGCAGCCCTTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: DCPDFPGSGTLL*RGRPAAALLKL
Trigger: CAGTTTGAGAAGGGCTGCAGCAGGCCTGCCCCGTCAAAGAAGGGTGCCTGAGCCTGGGAAATCAGGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 72 bp GTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTaGGCTGGGACATTACTGATACAGACACCATCACTG +
Preference number: 3 (lower is better)
Translates to: VTESGPVPQQLP*AGTLLIQTPSL
Trigger: CAGTGATGGTGTCTGTATCAGTAATGTCCCAGCCCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp CTGTGCCCCAGCAGCTCCCGTGGGCTGGGACATTACTaGTACAGACACCATCACTGGGCAGCACGTGGTACA +
Preference number: 3 (lower is better)
Translates to: LCPSSSRGLGHY*YRHHHWAARGT
Trigger: TGTACCACGTGCTGCCCAGTGATGGTGTCTGTATCAGTAATGTCCCAGCCCACGGGAGCTGCTGGGGCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp GGCAGCACGTGGTACACAAGCCACAGCCACACAGGTTaGGCTACCCACGTGGTCCATGCAATACTGCGTGGA +
Preference number: 3 (lower is better)
Translates to: GSTWYTSHSHTG*ATHVVHAILRG
Trigger: TCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCTGTGTGGCTGTGGCTTGTGTACCACGTGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 72 bp GTGGGTCACAACACGATAGGCAGACCAAGGGCTTCGTaGAACGCAAGGATCAGCACACAGGTGGTGGTGTTC +
Preference number: 3 (lower is better)
Translates to: VGHNTIGRPRAS*NARISTQVVVF
Trigger: GAACACCACCACCTGTGTGCTGATCCTTGCGTTCCACGAAGCCCTTGGTCTGCCTATCGTGTTGTGACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 72 bp AGGTTGAGCTACCCACGTGGTCCATGCAATACTGCGTaGACTGCACACAATGGACAGCTACGGAGCAAGGGG +
Preference number: 3 (lower is better)
Translates to: RLSYPRGPCNTA*TAHNGQLRSKG
Trigger: CCCCTTGCTCCGTAGCTGTCCATTGTGTGCAGTCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp GTGCTCCAGCAAACTCCATGGACACTGCCTAGCCCATaGGGTCACATACCTCTAAGCCACCGCTGTCACCAT +
Preference number: 3 (lower is better)
Translates to: VLQQTPWTLPSP*GHIPLSHRCHH
Trigger: ATGGTGACAGCGGTGGCTTAGAGGTATGTGACCTCATGGGCTAGGCAGTGTCCATGGAGTTTGCTGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp AAGCCTGAGCTCCTGACGCTGCCTATGTTCTTCCCCTaGTGGGCCGTACATACAGTCCAATGCCCACAAAGG +
Preference number: 3 (lower is better)
Translates to: KPELLTLPMFFP*WAVHTVQCPQR
Trigger: CCTTTGTGGGCATTGGACTGTATGTACGGCCCATCAGGGGAAGAACATAGGCAGCGTCAGGAGCTCAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR TCA 72 bp GGCATTACTGCAAGACATAGTGCAAGGCCCCAAGCCTaGGCTCCTGACGCTGCCTATGTTCTTCCCCTGATG +
Preference number: 3 (lower is better)
Translates to: GITARHSARPQA*APDAAYVLPLM
Trigger: CATCAGGGGAAGAACATAGGCAGCGTCAGGAGCTCAGGCTTGGGGCCTTGCACTATGTCTTGCAGTAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 72 bp CCACAGCCACACAGGTTGAGCTACCCACGTGGTCCATaGAATACTGCGTGGACTGCACACAATGGACAGCTA +
Preference number: 3 (lower is better)
Translates to: PQPHRLSYPRGP*NTAWTAHNGQL
Trigger: TAGCTGTCCATTGTGTGCAGTCCACGCAGTATTGCATGGACCACGTGGGTAGCTCAACCTGTGTGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CCA 72 bp ACACTGGGCTTGTTAGGCACGGGACCCTGCCATGCGTaGGGCATGGAGTTTCAAACAGTTATACACCAGGCA +
Preference number: 3 (lower is better)
Translates to: TLGLLGTGPCHA*GMEFQTVIHQA
Trigger: TGCCTGGTGTATAACTGTTTGAAACTCCATGCCCCACGCATGGCAGGGTCCCGTGCCTAACAAGCCCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR GCA 72 bp AAGAACACTGGGCTTGTTAGGCACGGGACCCTGCCATaGGTGGGGCATGGAGTTTCAAACAGTTATACACCA +
Preference number: 3 (lower is better)
Translates to: KNTGLVRHGTLP*VGHGVSNSYTP
Trigger: TGGTGTATAACTGTTTGAAACTCCATGCCCCACGCATGGCAGGGTCCCGTGCCTAACAAGCCCAGTGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR-3UTR CAA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTTCTGGATTCTGAGATaGAGCCAGTGGCATTTTAAT +
Preference number: 3 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLFWILR*SQWHFN
Trigger: ATTAAAATGCCACTGGCTCAATCTCAGAATCCAGAA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGACGCACCGCAGGGTCTaGGGGTGGGTAGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWTHRRV*GWVALQ
Trigger: CTGCAGTGCTACCCACCCCCAGACCCTGCGGTGCGT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGAGGAACTGGCCCAGCTaGTTGCAGGCGCGGACGAGC +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWRNWPS*LQARTS
Trigger: GCTCGTCCGCGCCTGCAACCAGCTGGGCCAGTTCCT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGTGCGGATGTCGGAGATaGAGACCGCTAGGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWCGCRR*RPLGLA
Trigger: TGCGAGGCCTAGCGGTCTTCATCTCCGACATCCGCA...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGTCGGCATTCTTCAGCTaGCTGTCACTGCGCAGCACG +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWSAFFS*LSLRST
Trigger: CGTGCTGCGCAGTGACAGCCAGCTGAAGAATGCCGA...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGGCTCACTGTCATGGTaGATGATCAGGCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWGSLSW*MIRLMA
Trigger: GGCCATCAGCCTGATCATCCACCATGACAGTGAGCC...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGCAGAGGGCTGGATCGTaGGTCCCCAGCTATCAAGTT +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWQRAGS*VPSYQV
Trigger: AACTTGATAGCTGGGGACCCACGATCCAGCCCTCTG...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGGGCCTTGTTCAGGATaGTCTCCAAGCACTCAGTCA +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWGPCSG*SPSTQS
Trigger: TGACTGAGTGCTTGGAGACCATCCTGAACAAGGCCC...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CAA 72 bp GAGTCCAGTGCATCCTTAGCGCAGCACCTGCCTGGGTaGCCATTCTCGCCCCAGACTGTCACTCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: ESSASLAQHLPG*PFSPQTVTPLP
Trigger: TGGCAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTCTCAGAAGCTTGACTaGCAGCCAAGGAGCCGGGAC +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLSQKLD*QPRSRD
Trigger: GTCCCGGCTCCTTGGCTGTCAGTCAAGCTTCTGAGA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGCCCGAGTGGGGACGCTaGACAAGTGGAACTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLPEWGR*TSGTWS
Trigger: ACTCCAAGTTCCACTTGTGCAGCGTCCCCACTCGGG...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCTCAGCTGGCTGTCACTaGGCAGCACGTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVSAGCH*AARPEW
Trigger: CCATTCAGGACGTGCTGCGCAGTGACAGCCAGCTGA...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGTTTGGCTCACTGTCATaGTGGATGATCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWFGSLS*WMIRLM
Trigger: CATCAGCCTGATCATCCACCATGACAGTGAGCCAAA...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCTTCCTCCAGGACAGTTaGCAGGATGTCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVFLQDS*QDVSAG
Trigger: GCCAGCACTGACATCCTGGCAACTGTCCTGGAGGAA...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCATGTTGACCACTTGTTaGACCTGTGCGCCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVMLTTC*TCAPPS
Trigger: GGATGGGGGCGCACAGGTGCAACAAGTGGTCAACAT...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCCTGCGCAGCACGTCCTaGATGGTAGCTTTTACCTCT +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVLRSTS*MVAFTS
Trigger: AGAGGTAAAAGCTACCATTCAGGACGTGCTGCGCAG...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGTCCATCGGATGCTTTaGTTTGAAGATATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWVHRML*FEDILH
Trigger: GTGCAGAATATCTTCAAAGCAAAGCATCCGATGGAC...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGATGTCCAGTCGCCCATaGGAACTAGGTCAGGTGATG +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLMSSRP*ELGQVM
Trigger: CATCACCTGACCTAGTTCCCATGGGCGACTGGACAT...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGGGTAGCTTTTACCTCTaGAAAGAGGTTCACGAACTT +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWGSFYL*KEVHEL
Trigger: AAGTTCGTGAACCTCTTTCCAGAGGTAAAAGCTACC...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCATCCATGGTATCTCCTaGCACGAGGATCTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVIHGIS*HEDLGD
Trigger: ATCCCCAAGATCCTCGTGGCAGGAGATACCATGGAT...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGAGTTTAGGAACTGCGTaGAGGTCTTGTTACCATAAA +
Preference number: 4 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWSLGTA*RSCYHK
Trigger: TTTATGGTAACAAGACCTCCACGCAGTTCCTAAACT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGAGCGTTCTTGGCATTTaGATGCTGGACCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLSVLGI*MLDLLG
Trigger: TCCAAGAAGGTCCAGCATTCAAATGCCAAGAACGCT...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCAGCACCCACGAAATTTaGAGGATTCGGGTCAACTTC +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVSTHEI*RIRVNF
Trigger: GAAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCT...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCTCCTCAGGGTTCTTCTaGGCCAGGGTGGTGATGAGG +
Preference number: 4 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTSSGFF*ARVVMR
Trigger: CCTCATCACCACCCTGGCCCAGAAGAACCCTGAGGA...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCGACTTGGGTGGCTCCTaGGCCTTGTTCAGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTDLGGS*ALFRMV
Trigger: GACCATCCTGAACAAGGCCCAGGAGCCACCCAAGTC...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGACCCAGCAGGTCTGCTaGCGGAGAAGGTGTGGACGC +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETTQQVC*RRRCGR
Trigger: GCGTCCACACCTTCTCCGTCAGCAGACCTGCTGGGT...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGAGATTAGTGTTGGAGTaGAGTTTAGGAACTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLRLVLE*SLGTAW
Trigger: CCACGCAGTTCCTAAACTTCACTCCAACACTAATCT...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGTTCGTCTCCCGGTGCTaGAGGAACTGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETFVSRC*RNWPSW
Trigger: CCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACGAA...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGGGTGGACAGCAGGAGTaGCCGAGTGGGGACGCTGCA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEGGQQE*PSGDAA
Trigger: TGCAGCGTCCCCACTCGGGCACTCCTGCTGTCCACC...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCTGCCACGAGGATCTTaGGGATCTCTCCGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDLPRGS*GSLRRR
Trigger: CCTTCGCCGGAGAGATCCCCAAGATCCTCGTGGCAG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTTGGCATTTGAATGCTaGACCTTCTTGGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLLAFEC*TFLDLG
Trigger: ACCCAAGTCCAAGAAGGTCCAGCATTCAAATGCCAA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGCAATTTCCTCTCGGATaGAGTAGTCAGCCGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLQFPLG*SSQPFL
Trigger: TAGAAACGGCTGACTACTCCATCCGAGAGGAAATTG...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCACGCTCAGGGAAGGGTaGCATTTCCTCCAGGACAGT +
Preference number: 4 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTTLREG*HFLQDS
Trigger: ACTGTCCTGGAGGAAATGCCACCCTTCCCTGAGCGT...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGCCCCCATCCACAGTTaGGTCCACGGGCTTAGTCTG +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDAPIHS*VHGLSL
Trigger: CAGACTAAGCCCGTGGACCCAACTGTGGATGGGGGC...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGCAATCTGGGTGGTTTTaGTGTGTATTATGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLQSGWF*CVLCQH
Trigger: GTGCTGGCATAATACACACCAAAACCACCCAGATTG...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
3UTR CAA 72 bp ATGGACAGCTACGGAGCAAGGGGATTCGGAGGCTCATaGTGGCCACAGCTAGATCATCTGGAACCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: MDSYGARGFGGS*WPQLDHLEPKP
Trigger: AGGCTTAGGTTCCAGATGATCTAGCTGTGGCCACAATGAGCCTCCGAATCCCCTTGCTCCGTAGCTGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTCACCAATACAGAGATaGAAAGGTAGCCAATCTGCT +
Preference number: 4 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLSPIQR*KGSQSA
Trigger: AGCAGATTGGCTACCTTTTCATCTCTGTATTGGTGA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCCACAGGGCTGCGCTCTaGTTCACACTATCCATGGTA +
Preference number: 4 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTHRAAL*FTLSMV
Trigger: TACCATGGATAGTGTGAAGCAGAGCGCAGCCCTGTG...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGAGGTTCGTCTCCCGGTaGTGCAGGAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKERFVSR*CRNWPS
Trigger: GCTGGGCCAGTTCCTGCAGCACCGGGAGACGAACCT...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCAATCTGCTGGGCGTTaGTCCGGTCACACATGGCGT +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDQSAGR*SGHTWR
Trigger: ACGCCATGTGTGACCGGAGCAACGCCCAGCAGATTG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCCCAGGTCAGTCACTGTaGTTGGGCCCTTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTPGQSL*LGPSSS
Trigger: AGAAGAAGAAGGGCCCAAGCACAGTGACTGACCTGG...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCATATTCTGCACTTCTTaGTGTGGATTGCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVIFCTS*CGLLNC
Trigger: GCAGTTGAGCAATCCACAGCAAGAAGTGCAGAATAT...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGGCAGGAGTGCCCGAGTaGGGACGCTGCACAAGTGGA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEAGVPE*GRCTSG
Trigger: TCCACTTGTGCAGCGTCCCCACTCGGGCACTCCTGC...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACACTTCTTGGACTTGGGTaGCTCCTGGGCCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTLLGLG*LLGLVQ
Trigger: CTGAACAAGGCCCAGGAGCCACCCAAGTCCAAGAAG...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGGGACCTTCTTGGACTTaGGTGGCTCCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETGPSWT*VAPGPC
Trigger: ACAAGGCCCAGGAGCCACCCAAGTCCAAGAAGGTCC...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATTCAGCTTGGCCAAGATaGAGGACTCACGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDSAWPR*RTHAQG
Trigger: TCCCTGAGCGTGAGTCCTCCATCTTGGCCAAGCTGA...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTGGAGTGGAGCAGGTTaGACTGGATCAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSWSGAG*TGSEGW
Trigger: CCAGCCCTCTGATCCAGTTCAACCTGCTCCACTCCA...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGAGGTCCACTGCCCGCTaGCTCACACTCACGTCTCTT +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKERSTAR*LTLTSL
Trigger: AAGAGACGTGAGTGTGAGGCAGCGGGCAGTGGACCT...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCAGTGCTGGCGACAGTaGTCAGTCGCAGGTACTCCA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEQCWRQ*SVAGTP
Trigger: TGGAGTACCTGCGACTGAGCACTGTCGCCAGCACTG...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGGTCTTCAGAGCCGGGTaGAAGAGGTGCGACTGCAGA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEVFRAG*KRCDCR
Trigger: TCTGCAGTCGCACCTCTTGCACCCGGCTCTGAAGAC...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCCACTTGTTGCACCTGTaGGCCCCCATCCACAGTTGG +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSHLLHL*APIHSW
Trigger: CCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTG...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAACTACCCCCAAGTGCTaGTCATTGAGGAGGTGTACC +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTTTPKC*SLRRCT
Trigger: GGTACACCTCCTCAATGACCAGCACTTGGGGGTAGT...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGAATGCTGGACCTTCTTaGACTTGGGTGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETNAGPS*TWVAPG
Trigger: CCCAGGAGCCACCCAAGTCCAAGAAGGTCCAGCATT...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGTGCTCCGGTCACACATaGCGTAGAGCAGGTCCACTG +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKECSGHT*RRAGPL
Trigger: CAGTGGACCTGCTCTACGCCATGTGTGACCGGAGCA...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTCAGCCACAATCTGCTaGGCGTTGCTCCGGTCACAC +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSSATIC*ALLRSH
Trigger: GTGTGACCGGAGCAACGCCCAGCAGATTGTGGCTGA...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCCACCATACCTGAACTaGATGTTGAGGACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDPPYLN*MLRTGA
Trigger: GGCACCTGTCCTCAACATCCAGTTCAGGTATGGTGG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCTGAGCTTGCAGGTTTaGCTCCAGGCGCAACAAGCA +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETLSLQV*LQAQQA
Trigger: TGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAG...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACATTGACCAAGTTCTCATaGCATGCTGGCGCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTLTKFS*HAGACN
Trigger: ATTGCAGGCGCCAGCATGTCATGAGAACTTGGTCAA...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACATGTAGCCGCCCACTTTaGCCAAGTTCTCATGACATG +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTCSRPL*PSSHDM
Trigger: CATGTCATGAGAACTTGGTCAAAGTGGGCGGCTACA...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGTACCCACATTGGCAATaGAGTGCAGGGCGAGACCCA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEYPHWQ*SAGRDP
Trigger: TGGGTCTCGCCCTGCACTGCATTGCCAATGTGGGTA...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCGATTGATGACAATCTaGATGACGCGGTACCACACC +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDRLMTI*MTRYHT
Trigger: GGTGTGGTACCGCGTCATCCAGATTGTCATCAATCG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGGTCACTACCCCCAAGTaGTGGTCATTGAGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKEVTTPK*WSLRRC
Trigger: ACACCTCCTCAATGACCAGCACTTGGGGGTAGTGAC...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGGCTTCACACTATCCATaGTATCTCCTGCCACGAGGA +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETASHYP*YLLPRG
Trigger: TCCTCGTGGCAGGAGATACCATGGATAGTGTGAAGC...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATATCCTGAAGATCTGTTaGTGCAGACGTCACAATCCT +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDILKIC*CRRHNP
Trigger: AGGATTGTGACGTCTGCATCAACAGATCTTCAGGAT...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGGACAGGTGCCTCTGTaGAATCAGATATACACTCAA +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDGQVPL*NQIYTQ
Trigger: TTGAGTGTATATCTGATTTCACAGAGGCACCTGTCC...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAGTGAAGTTTAGGAACTaGGTGGAGGTCTTGTTACCA +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTVKFRN*VEVLLP
Trigger: TGGTAACAAGACCTCCACGCAGTTCCTAAACTTCAC...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATCTTCTTGCTGTGGATTaGTCAACTGCTTCCAACGTT +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDLLAVD*STASNV
Trigger: AACGTTGGAAGCAGTTGAGCAATCCACAGCAAGAAG...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGTCTTCTTCTTCAGCTTaGCCAAGATGGAGGACTCAC +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETSSSSA*PRWRTH
Trigger: GTGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGA...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCGTCAGTCACTGTGCTTaGGCCCTTCTTCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSVSHCA*ALLLLQ
Trigger: CTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGAC...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACATTAACAGACACATTCTaGAAGGTCCCACCATACCTG +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTLTDTF*KVPPYL
Trigger: CAGGTATGGTGGGACCTTCCAGAATGTGTCTGTTAA...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCCCAAGTGTAGTCCACTaGATACTTCTCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSPSVVH*ILLSQD
Trigger: ATCCTGGCTGAGAAGTATGCAGTGGACTACACTTGG...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAGATGTTGAGGACAGGTaGCTCTGTGAAATCAGATAT +
Preference number: 4 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTDVEDR*LCEIRY
Trigger: ATATCTGATTTCACAGAGGCACCTGTCCTCAACATC...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTGCACTTCTTGCTGTaGATTGCTCAACTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKELHFLL*IAQLLP
Trigger: TGGAAGCAGTTGAGCAATCCACAGCAAGAAGTGCAG...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR TCA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTTCCGTGTATCTGTTTaGGCTCAGAAGATTCACAGC +
Preference number: 4 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSFRVSV*AQKIHS
Trigger: GCTGTGAATCTTCTGAGCTCAAACAGATACACGGAA...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGTTCTTGGCATTTGAATaGTGGACCTTCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETFLAFE*WTFLDL
Trigger: CAAGTCCAAGAAGGTCCAGCATTCAAATGCCAAGAA...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGAGCAGCCAATCTGGGTaGTTTTGGTGTGTATTATGC +
Preference number: 4 (lower is better)
Translates to: AVWYKDKRERQERRTNKESSQSG*FWCVLC
Trigger: GCATAATACACACCAAAACCACCCAGATTGGCTGCT...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR GCA 90 bp ACACTTAGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATAAATCCAATAATCTTTaGCTTAGTGATCTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: TLRSLFSTQPQGLHRSEDKSNNL*LSDLCV
Trigger: GACACAGAGATCACTAAGGCAAAGATTATTGGATTT...ATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CCA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGTTTTACAAACAAACCTaGCAAAGTTGTCTTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GVFICSVVQRQTRETRETFYKQT*QSCLQS
Trigger: GCTCTGAAGACAACTTTGCCAGGTTTGTTTGTAAAA...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp CCAGACCCAGCAGGTCTGCTGACGGAGAAGGTGTGGACGCAGCACTaGTGCTGGCTGGAACGGGTTCAGGGCCCCCATTCACATCGATGC +
Preference number: 5 (lower is better)
Translates to: PDPAGLLTEKVWTQH*CWLERVQGPHSHRC
Trigger: GCATCGATGTGAATGGGGGCCCTGAACCCGTTCCAGCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGCTGGGTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp GACCCAGCAGGTCTGCTGACGGAGAAGGTGTGGACGCAGCACTGGTaGTGGCTGGAACGGGTTCAGGGCCCCCATTCACATCGATGCTTC +
Preference number: 5 (lower is better)
Translates to: DPAGLLTEKVWTQHW*WLERVQGPHSHRCF
Trigger: GAAGCATCGATGTGAATGGGGGCCCTGAACCCGTTCCAGCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGCTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp CCAGCAGGTCTGCTGACGGAGAAGGTGTGGACGCAGCACTGGTGCTaGCTGGAACGGGTTCAGGGCCCCCATTCACATCGATGCTTCGCT +
Preference number: 5 (lower is better)
Translates to: PAGLLTEKVWTQHWC*LERVQGPHSHRCFA
Trigger: AGCGAAGCATCGATGTGAATGGGGGCCCTGAACCCGTTCCAGCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp CACTGGTGCTGGCTGGAACGGGTTCAGGGCCCCCATTCACATCGATaGTTCGCTCCCGCTTGGTCTCCTCCAGGTCAGTCACTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: HWCWLERVQGPHSHR*FAPAWSPPGQSLCL
Trigger: CAAGCACAGTGACTGACCTGGAGGAGACCAAGCGGGAGCGAAGCATCGATGTGAATGGGGGCCCTGAACCCGTTCCAGCCAGCACCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp TCAGCATCTCAGCCACAATCTGCTGGGCGTTGCTCCGGTCACACATaGCGTAGAGCAGGTCCACTGCCCGCTGCCTCACACTCACGTCTC +
Preference number: 5 (lower is better)
Translates to: SASQPQSAGRCSGHT*RRAGPLPAASHSRL
Trigger: GAGACGTGAGTGTGAGGCAGCGGGCAGTGGACCTGCTCTACGCCATGTGTGACCGGAGCAACGCCCAGCAGATTGTGGCTGAGATGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp GGAGGACTCACGCTCAGGGAAGGGTGGCATTTCCTCCAGGACAGTTaGCAGGATGTCAGTGCTGGCGACAGTGCTCAGTCGCAGGTACTC +
Preference number: 5 (lower is better)
Translates to: GGLTLREGWHFLQDS*QDVSAGDSAQSQVL
Trigger: GAGTACCTGCGACTGAGCACTGTCGCCAGCACTGACATCCTGGCAACTGTCCTGGAGGAAATGCCACCCTTCCCTGAGCGTGAGTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp CGCTCTGCTTCACACTATCCATGGTATCTCCTGCCACGAGGATCTTaGGGATCTCTCCGGCGAAGGCCTCCGCCATCTCACGGCTACCCA +
Preference number: 5 (lower is better)
Translates to: RSASHYPWYLLPRGS*GSLRRRPPPSHGYP
Trigger: TGGGTAGCCGTGAGATGGCGGAGGCCTTCGCCGGAGAGATCCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGAAGCAGAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp TTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCACTCCACTGTCTGAGCTTGCAGGTTaGGCTCCAGGCGCAACAAGC +
Preference number: 5 (lower is better)
Translates to: LAQHLPGLPFSPQTVTPLSELAG*APGATS
Trigger: GCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGA...CAGTGGAGTGACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp GAGACAGCTAGCGAGACAGAGGTCTTGAACTCCTCAGGGTTCTTCTaGGCCAGGGTGGTGATGAGGCTAGTCGCTGCAGTCACTACCCCC +
Preference number: 5 (lower is better)
Translates to: ETASETEVLNSSGFF*ARVVMRLVAAVTTP
Trigger: GGGGGTAGTGACTGCAGCGACTAGCCTCATCACCACCCTGGCCCAGAAGAACCCTGAGGAGTTCAAGACCTCTGTCTCGCTAGCTGTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp GAACGGGTTCAGGGCCCCCATTCACATCGATGCTTCGCTCCCGCTTaGTCTCCTCCAGGTCAGTCACTGTGCTTGGGCCCTTCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: ERVQGPHSHRCFAPA*SPPGQSLCLGPSSS
Trigger: AGAAGAAGAAGGGCCCAAGCACAGTGACTGACCTGGAGGAGACCAAGCGGGAGCGAAGCATCGATGTGAATGGGGGCCCTGAACCCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp ACAGGCGTAACAAGCACAGGGCTGCGCTCTGCTTCACACTATCCATaGTATCTCCTGCCACGAGGATCTTGGGGATCTCTCCGGCGAAGG +
Preference number: 5 (lower is better)
Translates to: TGVTSTGLRSASHYP*YLLPRGSWGSLRRR
Trigger: CCTTCGCCGGAGAGATCCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGAAGCAGAGCGCAGCCCTGTGCTTGTTACGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCTACCTGAACTGGATGTaGAGGACAGGTGCCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVYLNWM*RTGASV
Trigger: CACAGAGGCACCTGTCCTCAACATCCAGTTCAGGTA...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp CCTCCAGGTCAGTCACTGTGCTTGGGCCCTTCTTCTTCTTCAGCTTaGCCAAGATGGAGGACTCACGCTCAGGGAAGGGTGGCATTTCCT +
Preference number: 5 (lower is better)
Translates to: PPGQSLCLGPSSSSA*PRWRTHAQGRVAFP
Trigger: AGGAAATGCCACCCTTCCCTGAGCGTGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGACCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCACAATCTGCTGGGCGTaGCTCCGGTCACACATGGCG +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTTICWA*LRSHMA
Trigger: CGCCATGTGTGACCGGAGCAACGCCCAGCAGATTGT...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AATGGAGGCCCGGTAGTCACGGAGAGTGGGCCTGTGCCCCAGCAGCTCCCGTGGATCGGATGCTTTGCTTaGAAGATATTCTGCACTTCT +
Preference number: 5 (lower is better)
Translates to: NGGPVVTESGPVPQQLPWIGCFA*KIFCTS
Trigger: AGAAGTGCAGAATATCTTCAAAGCAAAGCATCCGAT...CCACGGGAGCTGCTGGGGCACAGGCCCACTCTCCGTGACTACCGGGCCTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCCAGCACCCACGAAATTaGCAGGATTCGGGTCAACTT +
Preference number: 5 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVQHPRN*QDSGQL
Trigger: AAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCTG...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp TCAGGTGATGTCCTGTACAGGCGTAACAAGCACAGGGCTGCGCTCTaGTTCACACTATCCATGGTATCTCCTGCCACGAGGATCTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGDVLYRRNKHRAAL*FTLSMVSPATRILG
Trigger: CCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGAAGCAGAGCGCAGCCCTGTGCTTGTTACGCCTGTACAGGACATCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGAACTGGCCCAGCTGGTaGCAGGCGCGGACGAGCAAG +
Preference number: 5 (lower is better)
Translates to: GVFICSVVQRQTRETRETNWPSW*QARTSK
Trigger: CTTGCTCGTCCGCGCCTGCAACCAGCTGGGCCAGTT...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCAGCAGTCTCAGAAGCTaGACTGACAGCCAAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTSSLRS*TDSQGA
Trigger: GGCTCCTTGGCTGTCAGTCAAGCTTCTGAGACTGCT...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCGCGATGCGGATGAGGTaGAGGATGGTGTCCACATAC +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTAMRMR*RMVSTY
Trigger: GTATGTGGACACCATCCTCAACCTCATCCGCATCGC...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCTTTCCTCCAGGACAGTaGCCAGGATGTCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTFPPGQ*PGCQCW
Trigger: CCAGCACTGACATCCTGGCAACTGTCCTGGAGGAAA...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAATGCTTCGCTCCCGCTaGGTCTCCTCCAGGTCAGTC +
Preference number: 5 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTMLRSR*VSSRSV
Trigger: GACTGACCTGGAGGAGACCAAGCGGGAGCGAAGCAT...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGTGCATCCTTAGCGCAGCACCTGCCTGGGTTGCCATTCTCGCCCCAGACTGTCCAACTGCTTCCAACGTaGAAAGAAATCCTGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SASLAQHLPGLPFSPQTVQLLPT*KEILRS
Trigger: GCTTCTCAGGATTTCTTTCAACGTTGGAAGCAGTTG...GACAGTCTGGGGCGAGAATGGCAACCCAGGCAGGTGCTGCGCTAAGGATGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp GGTGCCTCTGTGAAATCAGATATACACTCAATGTTGACCACTTGTTaGACCTGTGCGCCCCCATCCACAGTTGGGTCCACGGGCTTAGTC +
Preference number: 5 (lower is better)
Translates to: GASVKSDIHSMLTTC*TCAPPSTVGSTGLV
Trigger: GACTAAGCCCGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACAGAGGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp GCAGGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGTTTTaGTGTGTATTATGCCAGCACCCACGAAATTTGCAGGATTCGGGT +
Preference number: 5 (lower is better)
Translates to: AGLAPGATSSQSGWF*CVLCQHPRNLQDSG
Trigger: ACCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAGAATGCTGGACCTTCTaGGACTTGGGTGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTECWTF*DLGGSW
Trigger: CCAGGAGCCACCCAAGTCCAAGAAGGTCCAGCATTC...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACACTCAATGTTGACCACTaGTTGCACCTGTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTLNVDH*LHLCAP
Trigger: GGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAG...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 90 bp TCCACGTCGGCATTCTTCAGCTGGCTGTCACTGCGCAGCACGTCCTaGATGGTAGCTTTTACCTCTGGAAAGAGGTTCACGAACTTGATG +
Preference number: 5 (lower is better)
Translates to: STSAFFSWLSLRSTS*MVAFTSGKRFTNLM
Trigger: CATCAAGTTCGTGAACCTCTTTCCAGAGGTAAAAGCTACCATTCAGGACGTGCTGCGCAGTGACAGCCAGCTGAAGAATGCCGACGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp GAGCTTGCAGGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTGGGTaGTTTTGGTGTGTATTATGCCAGCACCCACGAAATTTGCAGGAT +
Preference number: 5 (lower is better)
Translates to: ELAGLAPGATSSQSG*FWCVLCQHPRNLQD
Trigger: ATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 90 bp TTTGCTGGTACGCAAGGTGAGTCTATACATCTGAGCTTGCAGGTTTaGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGTTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: FAGTQGESIHLSLQV*LQAQQAANLGGFGV
Trigger: CACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGATGTATAGACTCACCTTGCGTACCAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCTCCGTCTTCAAGGCATaGATGACCGTCTCAATGTGG +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTSVFKA*MTVSMW
Trigger: CCACATTGAGACGGTCATCAATGCCTTGAAGACGGA...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp TGTGAAATCAGATATACACTCAATGTTGACCACTTGTTGCACCTGTaGGCCCCCATCCACAGTTGGGTCCACGGGCTTAGTCTGCAGGTT +
Preference number: 5 (lower is better)
Translates to: CEIRYTLNVDHLLHL*APIHSWVHGLSLQV
Trigger: AACCTGCAGACTAAGCCCGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp AGGTCTCTCTTTTCCACCCAGCCACAAGGGCTTCACAGAAGTGAGGATGTAACAACAAACCTGGCAAAGTaGTCTTCAGAGCCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: RSLFSTQPQGLHRSEDVTTNLAK*SSEPGA
Trigger: TGCACCCGGCTCTGAAGACAACTTTGCCAGGTTTGT...TGTTACATCCTCACTTCTGTGAAGCCCTTGTGGCTGGGTGGAAAAGAGAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 90 bp ATTCACATAGTCTCTGAGAGACGGTGTCTTTGCTGGTACGCAAGGTaGGTCTATACATCTGAGCTTGCAGGTTTGGCTCCAGGCGCAACA +
Preference number: 5 (lower is better)
Translates to: IHIVSERRCLCWYAR*VYTSELAGLAPGAT
Trigger: TGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGATGTATAGACTCACCTTGCGTACCAGCAAAGACACCGTCTCTCAGAGACTATGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCAATCCTGAAGATCTGTaGATGCAGACGTCACAATCC +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTNPEDL*MQTSQS
Trigger: GGATTGTGACGTCTGCATCAACAGATCTTCAGGATT...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp AATCTGGGTGGTTTTGGTGTGTATTATGCCAGCACCCACGAAATTTaGAGGATTCGGGTCAACTTCTTCCAGGAGCGCAGAACCAAATCC +
Preference number: 5 (lower is better)
Translates to: NLGGFGVYYASTHEI*RIRVNFFQERRTKS
Trigger: GGATTTGGTTCTGCGCTCCTGGAAGAAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTGCACAAGTGGAACTaGGAGTGGAGCAGGTTGAAC +
Preference number: 5 (lower is better)
Translates to: AVWYKDKRERQERRTNKELHKWN*EWSRLN
Trigger: GTTCAACCTGCTCCACTCCAAGTTCCACTTGTGCAG...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGGGTCAGTCACTGTGCTaGGGCCCTTCTTCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: AVWYKDKRERQERRTNKEGQSLC*GPSSSS
Trigger: TGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGACC...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp ATTCTCGCCCCAGACTGTCACTCCACTGCCACACTTAGGTCTCTCTTTTCCACCGATATACACTCAATGTaGACCACTTGTTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: ILAPDCHSTATLRSLFSTDIHSM*TTCCTC
Trigger: ACAGGTGCAACAAGTGGTCAACATTGAGTGTATATC...GGTGGAAAAGAGAGACCTAAGTGTGGCAGTGGAGTGACAGTCTGGGGCGAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGACTTCTTGCTGTGGATaGCTCAACTGCTTCCAACGT +
Preference number: 5 (lower is better)
Translates to: GVFICSVVQRQTRETRETTSCCG*LNCFQR
Trigger: ACGTTGGAAGCAGTTGAGCAATCCACAGCAAGAAGT...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GGGGTGTTTATCTGCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCCAATCTGGGTGGTTTaGGTGTGTATTATGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GVFICSVVQRQTRETRETPIWVV*VCIMPA
Trigger: TGCTGGCATAATACACACCAAAACCACCCAGATTGG...CGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGCAGATAAACACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCTTCTTCTTCTTCAGCTaGGCCAAGATGGAGGACTCA +
Preference number: 5 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSFFFFS*AKMEDS
Trigger: TGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGAA...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCGTGGGCTGGAAAAATTaGTTGAGAGTGATGGGAAGC +
Preference number: 5 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSVGWKN*LRVMGS
Trigger: GCTTCCCATCACTCTCAACAAATTTTTCCAGCCCAC...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp ATTCTGGAAGGTCCCACCATACCTGAACTGGATGTTGAGGACAGGTaGCTCTGTGAAATCAGATATACACTCAATGTTGACCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: ILEGPTIPELDVEDR*LCEIRYTLNVDHLL
Trigger: CAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACAGAGGCACCTGTCCTCAACATCCAGTTCAGGTATGGTGGGACCTTCCAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp CAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGCGATATTCTGCACTTCTaGCTGTGGATTGCTCAACTG +
Preference number: 5 (lower is better)
Translates to: QCGTKTNERDKRDAQTKSDILHF*LWIAQL
Trigger: CAGTTGAGCAATCCACAGCAAGAAGTGCAGAATATC...GCTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGTCTTTACTTTTACAGTaGCGGATGTCGGAGATGAAG +
Preference number: 5 (lower is better)
Translates to: AVWYKDKRERQERRTNKESLLLQ*RMSEMK
Trigger: CTTCATCTCCGACATCCGCAACTGTAAAAGTAAAGA...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS-3UTR CAA 90 bp GCAGTGTGGTACAAAGACAAACGAGAGAGACAAGAGAGACGCACAAACAAAGAGTTTCCGTGTATCTGTTaGAGCTCAGAAGATTCACAG +
Preference number: 5 (lower is better)
Translates to: AVWYKDKRERQERRTNKEFPCIC*SSEDSQ
Trigger: CTGTGAATCTTCTGAGCTCAAACAGATACACGGAAA...CTCTTTGTTTGTGCGTCTCTCTTGTCTCTCTCGTTTGTCTTTGTACCACACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 90 bp TCCAATAATCTTTGCCTTAGTGATCTCTGTGTCCATCGGATGCTTTaGTTTGAAGATATTCTGCACTTCTTGCTGTGGATTGCTCAACTG +
Preference number: 5 (lower is better)
Translates to: SNNLCLSDLCVHRML*FEDILHFLLWIAQL
Trigger: CAGTTGAGCAATCCACAGCAAGAAGTGCAGAATATCTTCAAAGCAAAGCATCCGATGGACACAGAGATCACTAAGGCAAAGATTATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 72 bp AGCAGGGGGCACGGCCCCCAGACCCAGCAGGTCTGCTaGCGGAGAAGGTGTGGACGCAGCACTGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SRGHGPQTQQVC*RRRCGRSTGAG
Trigger: GCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGCTGGGTCTGGGGGCCGTGCCCCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CCCCCAGACCCAGCAGGTCTGCTGACGGAGAAGGTGTaGACGCAGCACTGGTGCTGGCTGGAACGGGTTCAG +
Preference number: 6 (lower is better)
Translates to: PPDPAGLLTEKV*TQHWCWLERVQ
Trigger: CTGAACCCGTTCCAGCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGCTGGGTCTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CAGCCACAATCTGCTGGGCGTTGCTCCGGTCACACATaGCGTAGAGCAGGTCCACTGCCCGCTGCCTCACAC +
Preference number: 6 (lower is better)
Translates to: QPQSAGRCSGHT*RRAGPLPAASH
Trigger: GTGTGAGGCAGCGGGCAGTGGACCTGCTCTACGCCATGTGTGACCGGAGCAACGCCCAGCAGATTGTGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp GCAGGTCTGCTGACGGAGAAGGTGTGGACGCAGCACTaGTGCTGGCTGGAACGGGTTCAGGGCCCCCATTCA +
Preference number: 6 (lower is better)
Translates to: AGLLTEKVWTQH*CWLERVQGPHS
Trigger: TGAATGGGGGCCCTGAACCCGTTCCAGCCAGCACCAGTGCTGCGTCCACACCTTCTCCGTCAGCAGACCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp TGGCTGGAACGGGTTCAGGGCCCCCATTCACATCGATaGTTCGCTCCCGCTTGGTCTCCTCCAGGTCAGTCA +
Preference number: 6 (lower is better)
Translates to: WLERVQGPHSHR*FAPAWSPPGQS
Trigger: TGACTGACCTGGAGGAGACCAAGCGGGAGCGAAGCATCGATGTGAATGGGGGCCCTGAACCCGTTCCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp ACGCTCAGGGAAGGGTGGCATTTCCTCCAGGACAGTTaGCAGGATGTCAGTGCTGGCGACAGTGCTCAGTCG +
Preference number: 6 (lower is better)
Translates to: TLREGWHFLQDS*QDVSAGDSAQS
Trigger: CGACTGAGCACTGTCGCCAGCACTGACATCCTGGCAACTGTCCTGGAGGAAATGCCACCCTTCCCTGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp GTGGCATTTCCTCCAGGACAGTTGCCAGGATGTCAGTaGTGGCGACAGTGCTCAGTCGCAGGTACTCCACAG +
Preference number: 6 (lower is better)
Translates to: VAFPPGQLPGCQ*WRQCSVAGTPQ
Trigger: CTGTGGAGTACCTGCGACTGAGCACTGTCGCCAGCACTGACATCCTGGCAACTGTCCTGGAGGAAATGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp TCACACTATCCATGGTATCTCCTGCCACGAGGATCTTaGGGATCTCTCCGGCGAAGGCCTCCGCCATCTCAC +
Preference number: 6 (lower is better)
Translates to: SHYPWYLLPRGS*GSLRRRPPPSH
Trigger: GTGAGATGGCGGAGGCCTTCGCCGGAGAGATCCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp AGCGAGACAGAGGTCTTGAACTCCTCAGGGTTCTTCTaGGCCAGGGTGGTGATGAGGCTAGTCGCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: SETEVLNSSGFF*ARVVMRLVAAV
Trigger: GACTGCAGCGACTAGCCTCATCACCACCCTGGCCCAGAAGAACCCTGAGGAGTTCAAGACCTCTGTCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp TCCTCCAGGTCAGTCACTGTGCTTGGGCCCTTCTTCTTCTTCAGCTaGGCCAAGATGGAGGACTCACGCTCAGGGAAGGGTGGCATTTCC +
Preference number: 6 (lower is better)
Translates to: SSRSVTVLGPFFFFS*AKMEDSRSGKGGIS
Trigger: GGAAATGCCACCCTTCCCTGAGCGTGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGACCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CTTGGCCAAGATGGAGGACTCACGCTCAGGGAAGGGTaGCATTTCCTCCAGGACAGTTGCCAGGATGTCAGT +
Preference number: 6 (lower is better)
Translates to: LGQDGGLTLREG*HFLQDSCQDVS
Trigger: ACTGACATCCTGGCAACTGTCCTGGAGGAAATGCCACCCTTCCCTGAGCGTGAGTCCTCCATCTTGGCCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CAGTCACTGTGCTTGGGCCCTTCTTCTTCTTCAGCTTaGCCAAGATGGAGGACTCACGCTCAGGGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: QSLCLGPSSSSA*PRWRTHAQGRV
Trigger: CACCCTTCCCTGAGCGTGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CTCCCGCTTGGTCTCCTCCAGGTCAGTCACTGTGCTTaGGCCCTTCTTCTTCTTCAGCTTGGCCAAGATGGA +
Preference number: 6 (lower is better)
Translates to: LPLGLLQVSHCA*ALLLLQLGQDG
Trigger: TCCATCTTGGCCAAGCTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGACCTGGAGGAGACCAAGCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp TTCACACTATCCATGGTATCTCCTGCCACGAGGATCTaGGGGATCTCTCCGGCGAAGGCCTCCGCCATCTCA +
Preference number: 6 (lower is better)
Translates to: FTLSMVSPATRI*GISPAKASAIS
Trigger: TGAGATGGCGGAGGCCTTCGCCGGAGAGATCCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp ACAAGCACAGGGCTGCGCTCTGCTTCACACTATCCATaGTATCTCCTGCCACGAGGATCTTGGGGATCTCTC +
Preference number: 6 (lower is better)
Translates to: TSTGLRSASHYP*YLLPRGSWGSL
Trigger: GAGAGATCCCCAAGATCCTCGTGGCAGGAGATACCATGGATAGTGTGAAGCAGAGCGCAGCCCTGTGCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp GCCTCAAACAGCACAGCGTTCTTGGCATTTGAATGCTaGACCTTCTTGGACTTGGGTGGCTCCTGGGCCTTG +
Preference number: 6 (lower is better)
Translates to: ASNSTAFLAFEC*TFLDLGGSWAL
Trigger: CAAGGCCCAGGAGCCACCCAAGTCCAAGAAGGTCCAGCATTCAAATGCCAAGAACGCTGTGCTGTTTGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp GTAGCCGCCCACTTTGACCAAGTTCTCATGACATGCTaGCGCCTGCAATGCCTCAAATACCGTCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: VAAHFDQVLMTC*RLQCLKYRLGS
Trigger: GCTGCCAAGACGGTATTTGAGGCATTGCAGGCGCCAGCATGTCATGAGAACTTGGTCAAAGTGGGCGGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp TGCAGGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTaGGTGGTTTTGGTGTGTATTATGCCAGCACCCACG +
Preference number: 6 (lower is better)
Translates to: CRFGSRRNKQPI*VVLVCIMPAPT
Trigger: CGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp TCAGTCACTGTGCTTGGGCCCTTCTTCTTCTTCAGCTaGGCCAAGATGGAGGACTCACGCTCAGGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: SVTVLGPFFFFS*AKMEDSRSGKG
Trigger: ACCCTTCCCTGAGCGTGAGTCCTCCATCTTGGCCAAGCTGAAGAAGAAGAAGGGCCCAAGCACAGTGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp GACGGTGTCTTTGCTGGTACGCAAGGTGAGTCTATACATCTGAGCTaGCAGGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: DGVFAGTQGESIHLS*QVWLQAQQAANLGG
Trigger: ACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGATGTATAGACTCACCTTGCGTACCAGCAAAGACACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp ACGCAAGGTGAGTCTATACATCTGAGCTTGCAGGTTTaGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGT +
Preference number: 6 (lower is better)
Translates to: TQGESIHLSLQV*LQAQQAANLGG
Trigger: ACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGATGTATAGACTCACCTTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp GACAGGTGCCTCTGTGAAATCAGATATACACTCAATGTTGACCACTaGTTGCACCTGTGCGCCCCCATCCACAGTTGGGTCCACGGGCTT +
Preference number: 6 (lower is better)
Translates to: DRCLCEIRYTLNVDH*LHLCAPIHSWVHGL
Trigger: AAGCCCGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACAGAGGCACCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp TGCAGGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGTTTaGGTGTGTATTATGCCAGCACCCACGAAATTTGCAGGATTCGGG +
Preference number: 6 (lower is better)
Translates to: CRFGSRRNKQPIWVV*VCIMPAPTKFAGFG
Trigger: CCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 72 bp GCATTCTTCAGCTGGCTGTCACTGCGCAGCACGTCCTaGATGGTAGCTTTTACCTCTGGAAAGAGGTTCACG +
Preference number: 6 (lower is better)
Translates to: AFFSWLSLRSTS*MVAFTSGKRFT
Trigger: CGTGAACCTCTTTCCAGAGGTAAAAGCTACCATTCAGGACGTGCTGCGCAGTGACAGCCAGCTGAAGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 72 bp GTGTCTTTGCTGGTACGCAAGGTGAGTCTATACATCTaGGCTTGCAGGTTTGGCTCCAGGCGCAACAAGCAG +
Preference number: 6 (lower is better)
Translates to: VSLLVRKVSLYI*ACRFGSRRNKQ
Trigger: CTGCTTGTTGCGCCTGGAGCCAAACCTGCAAGCTCAGATGTATAGACTCACCTTGCGTACCAGCAAAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp AGATATACACTCAATGTTGACCACTTGTTGCACCTGTaGGCCCCCATCCACAGTTGGGTCCACGGGCTTAGT +
Preference number: 6 (lower is better)
Translates to: RYTLNVDHLLHL*APIHSWVHGLS
Trigger: ACTAAGCCCGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp CCAGGATGGCCACCTTCAGCACAATTTCCTCTCGGATaGAGTAGTCAGCCGTTTCTAGGTAGCTCAGCATCT +
Preference number: 6 (lower is better)
Translates to: PGWPPSAQFPLG*SSQPFLGSSAS
Trigger: AGATGCTGAGCTACCTAGAAACGGCTGACTACTCCATCCGAGAGGAAATTGTGCTGAAGGTGGCCATCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp GCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGTTTTaGTGTGTATTATGCCAGCACCCACGAAATTTGCAG +
Preference number: 6 (lower is better)
Translates to: APGATSSQSGWF*CVLCQHPRNLQ
Trigger: CTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CCA 72 bp GGTTTGGCTCCAGGCGCAACAAGCAGCCAATCTGGGTaGTTTTGGTGTGTATTATGCCAGCACCCACGAAAT +
Preference number: 6 (lower is better)
Translates to: GLAPGATSSQSG*FWCVLCQHPRN
Trigger: ATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp GGCTCCAGGCGCAACAAGCAGCCAATCTGGGTGGTTTaGGTGTGTATTATGCCAGCACCCACGAAATTTGCA +
Preference number: 6 (lower is better)
Translates to: GSRRNKQPIWVV*VCIMPAPTKFA
Trigger: TGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTGGCTGCTTGTTGCGCCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp AGGTGCCTCTGTGAAATCAGATATACACTCAATGTTGACCACTTGTaGCACCTGTGCGCCCCCATCCACAGTTGGGTCCACGGGCTTAGT +
Preference number: 6 (lower is better)
Translates to: RCLCEIRYTLNVDHL*HLCAPIHSWVHGLS
Trigger: ACTAAGCCCGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACAGAGGCACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp GCCAAGGAGCCGGGACAAAGTAGTAAGTATAATCCTGAAGATCTGTaGATGCAGACGTCACAATCCTGCTCAGTCGCGAGACAGCTAGCG +
Preference number: 6 (lower is better)
Translates to: AKEPGQSSKYNPEDL*MQTSQSCSVARQLA
Trigger: CGCTAGCTGTCTCGCGACTGAGCAGGATTGTGACGTCTGCATCAACAGATCTTCAGGATTATACTTACTACTTTGTCCCGGCTCCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp AATCCTGAAGATCTGTTGATGCAGACGTCACAATCCTaGTCAGTCGCGAGACAGCTAGCGAGACAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: NPEDLLMQTSQS*SVARQLARQRS
Trigger: AGACCTCTGTCTCGCTAGCTGTCTCGCGACTGAGCAGGATTGTGACGTCTGCATCAACAGATCTTCAGGATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp GTGAAATCAGATATACACTCAATGTTGACCACTTGTTaGACCTGTGCGCCCCCATCCACAGTTGGGTCCACG +
Preference number: 6 (lower is better)
Translates to: VKSDIHSMLTTC*TCAPPSTVGST
Trigger: CGTGGACCCAACTGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp GGTTTTGGTGTGTATTATGCCAGCACCCACGAAATTTaGAGGATTCGGGTCAACTTCTTCCAGGAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: GFGVYYASTHEI*RIRVNFFQERR
Trigger: TCTGCGCTCCTGGAAGAAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp ACAGGTGCCTCTGTGAAATCAGATATACACTCAATGTaGACCACTTGTTGCACCTGTGCGCCCCCATCCACA +
Preference number: 6 (lower is better)
Translates to: TGASVKSDIHSM*TTCCTCAPPST
Trigger: TGTGGATGGGGGCGCACAGGTGCAACAAGTGGTCAACATTGAGTGTATATCTGATTTCACAGAGGCACCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp TGGTTTTGGTGTGTATTATGCCAGCACCCACGAAATTaGCAGGATTCGGGTCAACTTCTTCCAGGAGCGCAG +
Preference number: 6 (lower is better)
Translates to: WFWCVLCQHPRN*QDSGQLLPGAQ
Trigger: CTGCGCTCCTGGAAGAAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 90 bp CAATCTGGGTGGTTTTGGTGTGTATTATGCCAGCACCCACGAAATTaGCAGGATTCGGGTCAACTTCTTCCAGGAGCGCAGAACCAAATC +
Preference number: 6 (lower is better)
Translates to: QSGWFWCVLCQHPRN*QDSGQLLPGAQNQI
Trigger: GATTTGGTTCTGCGCTCCTGGAAGAAGTTGACCCGAATCCTGCAAATTTCGTGGGTGCTGGCATAATACACACCAAAACCACCCAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS TCA 72 bp CGGGACAAAGTAGTAAGTATAATCCTGAAGATCTGTTaGTGCAGACGTCACAATCCTGCTCAGTCGCGAGAC +
Preference number: 6 (lower is better)
Translates to: RDKVVSIILKIC*CRRHNPAQSRD
Trigger: GTCTCGCGACTGAGCAGGATTGTGACGTCTGCATCAACAGATCTTCAGGATTATACTTACTACTTTGTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp ACATTCTGGAAGGTCCCACCATACCTGAACTGGATGTaGAGGACAGGTGCCTCTGTGAAATCAGATATACAC +
Preference number: 6 (lower is better)
Translates to: TFWKVPPYLNWM*RTGASVKSDIH
Trigger: GTGTATATCTGATTTCACAGAGGCACCTGTCCTCAACATCCAGTTCAGGTATGGTGGGACCTTCCAGAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp TTCTTCCAGGAGCGCAGAACCAAATCCAATAATCTTTaGCTTAGTGATCTCTGTGTCCATCGGATGCTTTGC +
Preference number: 6 (lower is better)
Translates to: FFQERRTKSNNL*LSDLCVHRMLC
Trigger: GCAAAGCATCCGATGGACACAGAGATCACTAAGGCAAAGATTATTGGATTTGGTTCTGCGCTCCTGGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS CAA 72 bp GCCTTAGTGATCTCTGTGTCCATCGGATGCTTTGCTTaGAAGATATTCTGCACTTCTTGCTGTGGATTGCTC +
Preference number: 6 (lower is better)
Translates to: ALVISVSIGCFA*KIFCTSCCGLL
Trigger: GAGCAATCCACAGCAAGAAGTGCAGAATATCTTCAAAGCAAAGCATCCGATGGACACAGAGATCACTAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12
CDS GCA 72 bp CTTTGCCTTAGTGATCTCTGTGTCCATCGGATGCTTTaGTTTGAAGATATTCTGCACTTCTTGCTGTGGATT +
Preference number: 6 (lower is better)
Translates to: LCLSDLCVHRML*FEDILHFLLWI
Trigger: AATCCACAGCAAGAAGTGCAGAATATCTTCAAAGCAAAGCATCCGATGGACACAGAGATCACTAAGGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000003038.12