RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AP2A1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060279

Ensembl transcript IDs: ENSMUST00000085399.13, ENSMUST00000107857.11, ENSMUST00000166972.9, ENSMUST00000167930.8, ENSMUST00000207814.2, ENSMUST00000208405.2, ENSMUST00000208472.2

Found 447 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTaGCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCA +
Preference number: 1 (lower is better)
Translates to: AVATGGPLAVPLHHS*LHPRAAWHWPYTRA
Trigger: TGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR TCA 90 bp TGGAGTGCTGCACCTTCTTGGACTTGGGAGGCTCCTGGGCCTTGTTaGGCACAGTCTCCAGACACTCCACTAACCGCCCTTTCACGGCTG +
Preference number: 1 (lower is better)
Translates to: WSAAPSWTWEAPGPC*AQSPDTPLTALSRL
Trigger: CAGCCGTGAAAGGGCGGTTAGTGGAGTGTCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR GCA 90 bp ATGAGGCTAATGGTCTCAAAGAGGATAGCGTTCTTGGCGTTGGAGTaGTGCACCTTCTTGGACTTGGGAGGCTCCTGGGCCTTGTTGAGC +
Preference number: 1 (lower is better)
Translates to: MRLMVSKRIAFLALE*CTFLDLGGSWALLS
Trigger: GCTCAACAAGGCCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTATCCTCTTTGAGACCATTAGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCCGCTCCACCACAGCTaGCTCCATCCCAGGGCTGCC +
Preference number: 2 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLPLHHS*LHPRAA
Trigger: GGCAGCCCTGGGATGGAGGCAGCTGTGGTGGAGCGG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCCTCCATCCCAGGGCTaGCTGGCACTGGCCATATAC +
Preference number: 2 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLPPSQG*LALAIY
Trigger: GTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACATCCCAGGGCTGCCTaGCACTGGCCATATACCAGG +
Preference number: 2 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPHPRAA*HWPYTR
Trigger: CCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR CCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACCATCCCAGGGCTGCCTaGCACTGGCCATATACCAGG +
Preference number: 2 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHHPRAA*HWPYTR
Trigger: CCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATG...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCAGGGCTaGCTGGCACTGGCCATATAC +
Preference number: 2 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLPPSQG*LALAIY
Trigger: GTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGG...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCATCCCAGGGCTGCCTaGCACTGGCCATATACCAGG +
Preference number: 2 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPHPRAA*HWPYTR
Trigger: CCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATG...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCATCCCAGGGCTGCCTaGCACTGGCCATATACCAGG +
Preference number: 2 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAHPRAA*HWPYTR
Trigger: CCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR GCA 90 bp CTGCTTGGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGTTAGTCTCCCGGTGCTaGAGGAACTGGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: LLGIAPVTHGIQEISRPLLVSRC*RNWPSW
Trigger: CCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACTAA...CAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR CCA 90 bp GGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCCTCACTGCATCCTCTGGTGGTaGGTAACACTGGAGCAGCCG +
Preference number: 2 (lower is better)
Translates to: GIAPVTHGIQEISRPLPHCILWW*VTLEQP
Trigger: CGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCA...GTGAGGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR CCA 90 bp GGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCCTCACCGCGGACCAGGAGGTTaGGCTCACTGTCATAGTGGA +
Preference number: 2 (lower is better)
Translates to: GIAPVTHGIQEISRPLPHRGPGG*AHCHSG
Trigger: TCCACTATGACAGTGAGCCCAACCTCCTGGTCCGCG...GTGAGGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR CCA 90 bp CTGCTTGGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGGACTTGGGAGGCTCCTaGGCCTTGTTGAGCACAGTC +
Preference number: 2 (lower is better)
Translates to: LLGIAPVTHGIQEISRPLDLGGS*ALLSTV
Trigger: GACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTC...CAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR GCA 90 bp GCCCTTTCACGGCTGCATCCTCTGGTGGTGGGTAACACTGGAGCAGCCGCAGTACACAGAGAGCCAGGGTaGAGGAACGAAGTAGTAAGT +
Preference number: 2 (lower is better)
Translates to: ALSRLHPLVVGNTGAAAVHREPG*RNEVVS
Trigger: ACTTACTACTTCGTTCCTGCACCCTGGCTCTCTGTG...TACTGCGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCAGCCGTGAAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR CAA 90 bp TGGATGATGAGGCTAATGGTCTCAAAGAGGATAGCGTTCTTGGCGTaGGAGTGCTGCACCTTCTTGGACTTGGGAGGCTCCTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: WMMRLMVSKRIAFLA*ECCTFLDLGGSWAL
Trigger: CAAGGCCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTATCCTCTTTGAGACCATTAGCCTCATCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR CAA 90 bp GAGACGATCCGGCTTAAGCGAGACACAGCCAGGGAGATACAGGTCTaGAAGTCATCCGGATTCTTCTTGCAGAGACAGGTGATGAGGCTG +
Preference number: 2 (lower is better)
Translates to: ETIRLKRDTAREIQV*KSSGFFLQRQVMRL
Trigger: CAGCCTCATCACCTGTCTCTGCAAGAAGAATCCGGATGACTTCAAGACCTGTATCTCCCTGGCTGTGTCTCGCTTAAGCCGGATCGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR CAA 90 bp ACCAGGACTGAGATGAACAGGTACCCTATCTGCTTCTCCGTGTACTaGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGTCCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: TRTEMNRYPICFSVY*LELSRFTASICPKS
Trigger: TGACTTTGGACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGAGAAGCAGATAGGGTACCTGTTCATCTCAGTCCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR CAA 90 bp AAGGCCTTGTCCCCTTTGAACTTGGAACGGATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCAGCCTCTTTGCTCTTGCCTTTAATC +
Preference number: 2 (lower is better)
Translates to: KALSPLNLERMLASS*LILLISASLLLPLI
Trigger: GATTAAAGGCAAGAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGAACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR GCA 72 bp ACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTaGCTCCATCCCAGGGCTGCCTGGCACTGGCCATAT +
Preference number: 3 (lower is better)
Translates to: TGGPLAVPLHHS*LHPRAAWHWPY
Trigger: ATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR-3UTR CAA 90 bp TGCTTGGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCGAGTGCTGCACCTTCTaGGACTTGGGAGGCTCCTGG +
Preference number: 3 (lower is better)
Translates to: CLALLRSHMAYRRSAARCECCTF*DLGGSW
Trigger: CCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTC...GCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR CCA 72 bp CTGACACAATCTGCTTGGCATTGCTCCGGTCACACATaGCATACAGGAGATCAGCCGCCCGCTGCCTCACAC +
Preference number: 3 (lower is better)
Translates to: LTQSAWHCSGHT*HTGDQPPAASH
Trigger: GTGTGAGGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
3UTR-3UTR CAA 90 bp TGCTTCTCCGTGTACTTGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGTCCATTGGCCAGTTCCTTGTaGATCCTCTTGATCTCAGCC +
Preference number: 3 (lower is better)
Translates to: CFSVYLLELSRFTASICPLASSL*ILLISA
Trigger: GGCTGAGATCAAGAGGATCAACAAGGAACTGGCCAA...TGGACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGAGAAGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR-3UTR CAA 90 bp TCCGTGTACTTGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGTCCAAAGTCAAAGGCCTTGTCCCCTTaGAACTTGGAACGGATGTTG +
Preference number: 3 (lower is better)
Translates to: SVYLLELSRFTASICPKSKALSP*NLERML
Trigger: CAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT...TGACTTTGGACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR-3UTR CAA 90 bp TGCTTCTCCGTGTACTTGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGTCCAATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCA +
Preference number: 3 (lower is better)
Translates to: CFSVYLLELSRFTASICPMLASS*LILLIS
Trigger: TGAGATCAAGAGGATCAACAAGGAACTGGCCAACAT...TGGACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGAGAAGCA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR-3UTR CAA 90 bp GAAGAGCAGCTTACACACATACTTCTTTTTACTGTAGCCATCCAAGGCCTTGTCTCCTTGTTGATCCTCTaGATCTCAGCCTCTTTGCTC +
Preference number: 3 (lower is better)
Translates to: EEQLTHILLFTVAIQGLVSLLIL*ISASLL
Trigger: GAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGA...GACAAGGCCTTGGATGGCTACAGTAAAAAGAAGTATGTGTGTAAGCTGCTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
3UTR-3UTR CAA 90 bp GTCATGGCCAAGCAGGAATATGAAGAGCAGCTTACACACATACTTCTTTTTACTTTGTCCCCTTTGAACTaGGAACGGATGTTGGCCAGT +
Preference number: 3 (lower is better)
Translates to: VMAKQEYEEQLTHILLFTLSPLN*ERMLAS
Trigger: ACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAA...AGTAAAAAGAAGTATGTGTGTAAGCTGCTCTTCATATTCCTGCTTGGCCATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGAGTGGGCCCCAGGCTaGGCTGTGCAGTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAEWAPG*AVQWGR
Trigger: ACGGCCCCACTGCACAGCCCAGCCTGGGGCCCACTC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCGTCCACTCGCCCATaGGCACCAAGTCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAPSTRP*APSRAR
Trigger: CCTCGCCCGACTTGGTGCCCATGGGCGAGTGGACGG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGGGTCGACACAGTGCTaGGGGTGGGCTCCACACCCC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAGSTQC*GWAPHP
Trigger: GGGGTGTGGAGCCCACCCCCAGCACTGTGTCGACCC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGGGCTCCAGCTCGCTaGGGAAGGCCTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLGAPAR*GRPPQE
Trigger: CTCCTGAGGAGGCCTTCCTCAGCGAGCTGGAGCCCC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR TCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCTGGGAGCTTCAGAGTaGGGGACTGGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRALGASE*GTGRCH
Trigger: GTGGCACCGCCCAGTCCCTCACTCTGAAGCTCCCAG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGAGTGGGCCCCAGGCTaGGCTGTGCAGTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPEWAPG*AVQWGR
Trigger: ACGGCCCCACTGCACAGCCCAGCCTGGGGCCCACTC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCTGGGAGCTTCAGAGTaGGGGACTGGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLLGASE*GTGRCH
Trigger: GTGGCACCGCCCAGTCCCTCACTCTGAAGCTCCCAG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGATCAGCCGCCCGCTaGCTCACACTGACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLRSAAR*LTLTSR
Trigger: GCGGGACGTCAGTGTGAGGCAGCGGGCGGCTGATCT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGTCGACACAGTGCTaGGGGTGGGCTCCACACCCC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATGSTQC*GWAPHP
Trigger: GGGGTGTGGAGCCCACCCCCAGCACTGTGTCGACCC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACCTGGGAGCTTCAGAGTaGGGGACTGGGCGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHLGASE*GTGRCH
Trigger: GTGGCACCGCCCAGTCCCTCACTCTGAAGCTCCCAG...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCCTCAGGACCTGGGCTaGGGAAGGCCTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATPQDLG*GRPPQE
Trigger: CTCCTGAGGAGGCCTTCCTCAGCCCAGGTCCTGAGG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAACTGGCCCAGCTGGTTaGAGGCGCGGACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPTGPAG*RRGPGG
Trigger: ACCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGT...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCTTAGTCTCCCGGTGCTaGAGGAACTGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRALVSRC*RNWPSW
Trigger: CCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACTAA...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAAGATCAGCCGCCCGCTaGCTCACACTGACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPRSAAR*LTLTSR
Trigger: GCGGGACGTCAGTGTGAGGCAGCGGGCGGCTGATCT...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGTCTTGACGGCCTCGTaGGAGAACTCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLVLTAS*ENSELA
Trigger: GGCCAGCTCCGAGTTCTCCCACGAGGCCGTCAAGAC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCAAGTGCACTACACGTaGCGTCCACTCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLQVHYT*RPLAHG
Trigger: CCCATGGGCGAGTGGACGGCACGTGTAGTGCACTTG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCACTGGCCCAGCTGGTTaGAGGCGCGGACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASTGPAG*RRGPGG
Trigger: ACCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCCCCAGGGCCCTTCTTaGGCTTCAGCTTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLPQGPS*ASAWPR
Trigger: TCTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGCAGACACCCCACCTaGAGGGCCTTCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLSRHPT*RAFVWM
Trigger: CATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAGRQAL*WCAGLD
Trigger: GTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCGTCCACTCGCCCATaGGCACCAAGTCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLPSTRP*APSRAR
Trigger: CCTCGCCCGACTTGGTGCCCATGGGCGAGTGGACGG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCAGTGCTGCACCTTCTTaGACTTGGGAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRASAAPS*TWEAPG
Trigger: CCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACT...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGTCTTGACGGCCTCGTaGGAGAACTCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPVLTAS*ENSELA
Trigger: GGCCAGCTCCGAGTTCTCCCACGAGGCCGTCAAGAC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGGGTCGACACAGTGCTaGGGGTGGGCTCCACACCCC +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLGSTQC*GWAPHP
Trigger: GGGGTGTGGAGCCCACCCCCAGCACTGTGTCGACCC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGCTGGGCTGTGCAGTaGGGCCGTCAGAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLGWAVQ*GRQRRH
Trigger: ATGTCTTCTCTGACGGCCCCACTGCACAGCCCAGCC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPAHRQQ*RRQEVS
Trigger: CGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCGCTGGAAAAAGTCTTaGGCCGCCATCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRARWKKS*AAISVG
Trigger: GCCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCTATGTCCTCAGGACCTaGGCTGAGGAAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAYVLRT*AEEGLL
Trigger: GAGGAGGCCTTCCTCAGCCCAGGTCCTGAGGACATA...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCCGTCATCACGGTTGGTaGCGATCTGCAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPRHHGW*RSAARG
Trigger: ACCGCGTGCTGCAGATCGTCACCAACCGTGATGACG...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTTCACCATGTTCTCATaGCAGGCTGGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLFTMFS*QAGAWR
Trigger: CCTCCAGGCCCCAGCCTGTCATGAGAACATGGTGAA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCCTCAGGACCTGGGCTaGGGAAGGCCTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAPQDLG*GRPPQE
Trigger: CTCCTGAGGAGGCCTTCCTCAGCCCAGGTCCTGAGG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACCAAGTGCACTACACGTaGCGTCCACTCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHQVHYT*RPLAHG
Trigger: CCCATGGGCGAGTGGACGGCACGTGTAGTGCACTTG...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGACTGGCCCAGCTGGTTaGAGGCGCGGACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLTGPAG*RRGPGG
Trigger: ACCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCACTGGCCCAGCTGGTTaGAGGCGCGGACCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLTGPAG*RRGPGG
Trigger: ACCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGT...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGGTTAGTCTCCCGGTaGTGCAGGAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHRLVSR*CRNWPS
Trigger: GCTGGGCCAGTTCCTGCAGCACCGGGAGACTAACCT...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCCCAGGGCCCTTCTTaGGCTTCAGCTTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPPQGPS*ASAWPR
Trigger: TCTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACTGCTGCTGGTGTCCCTaGGGCTGTCATCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHCCWCP*GCHLGH
Trigger: GTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCA...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCTGCTGCTGGTGTCCCTaGGGCTGTCATCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPCCWCP*GCHLGH
Trigger: GTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCA...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCCCCAGGCTGGGCTGTaGAGTGGGGCCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAPQAGL*SGAVRE
Trigger: TTCTCTGACGGCCCCACTGCACAGCCCAGCCTGGGG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCCCCAGGCTGGGCTGTaGAGTGGGGCCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCPQAGL*SGAVRE
Trigger: TTCTCTGACGGCCCCACTGCACAGCCCAGCCTGGGG...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCCACCGTCCACTTGTaGCGCCACACGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASATVHL*RHTLGL
Trigger: CAGACCAAGCGTGTGGCGGCACAAGTGGACGGTGGC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGGGGGAGGCTCAGCTaGTTCCAGCGCTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLRGRLS*FQRWKK
Trigger: CTTTTTCCAGCGCTGGAAGCAGCTGAGCCTCCCCCT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAGGAACTGGCCCAGCTaGTTGCAGGCGCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCRNWPS*LQARTR
Trigger: CCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTTCCT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCAGGAACTGGCCCAGCTaGTTGCAGGCGCGGACCAGG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLRNWPS*LQARTR
Trigger: CCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTTCCT...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGAACCCCTTGGATGGTaGCCTTGGTCTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAEPLGW*PWSQGR
Trigger: TCTTCCCTGAGACCAAGGCCACCATCCAAGGGGTTC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGCAGAACCCCTTGGATaGTGGCCTTGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLAEPLG*WPWSQG
Trigger: TCCCTGAGACCAAGGCCACCATCCAAGGGGTTCTGC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCTGTCATCTAGGGCACTaGCTGCCCCAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPCHLGH*LPQGPS
Trigger: AGAAGGGCCCTGGGGCAGCCAGTGCCCTAGATGACA...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGAGTGGGCCCCAGGCTaGGCTGTGCAGTGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGEWAPG*AVQWGR
Trigger: ACGGCCCCACTGCACAGCCCAGCCTGGGGCCCACTC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASAHRQQ*RRQEVS
Trigger: CGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGCTGCTTCCAGCGCTaGAAAAAGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLSCFQR*KKSWAA
Trigger: GGCGGCCCAAGACTTTTTCCAGCGCTGGAAGCAGCT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTTTGGGCCTGGGCATTaGGCTCCAGCCGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATFGPGH*APAEAD
Trigger: GTCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACGGTACATTTGGGCCTaGGCATTGGGCTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPRYIWA*ALGSSR
Trigger: TCGGCTGGAGCCCAATGCCCAGGCCCAAATGTACCG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCGGTACATTTGGGCCTaGGCATTGGGCTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATRYIWA*ALGSSR
Trigger: TCGGCTGGAGCCCAATGCCCAGGCCCAAATGTACCG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLSGCRR*TRRAHA
Trigger: TGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCSGCRR*TRRAHA
Trigger: TGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCGTCATCACGGTTGGTaGCGATCTGCAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASRHHGW*RSAARG
Trigger: ACCGCGTGCTGCAGATCGTCACCAACCGTGATGACG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTTCACCATGTTCTCATaGCAGGCTGGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATFTMFS*QAGAWR
Trigger: CCTCCAGGCCCCAGCCTGTCATGAGAACATGGTGAA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGGGGCTCCAGCTCGCTaGGGAAGGCCTCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGGAPAR*GRPPQE
Trigger: CTCCTGAGGAGGCCTTCCTCAGCGAGCTGGAGCCCC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR TCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGCAGCTCACACAAGTaGCGGGAGACAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLSSSHK*RETGSL
Trigger: CAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGCTTCACACTGTCCATaGTGTCCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPASHCP*CPQPPG
Trigger: TCCTGGTGGCTGGGGACAGCATGGACAGTGTGAAGC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTTAGTCTCCCGGTGCTaGAGGAACTGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASLVSRC*RNWPSW
Trigger: CCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACTAA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGGTTAGTCTCCCGGTaGTGCAGGAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASRLVSR*CRNWPS
Trigger: GCTGGGCCAGTTCCTGCAGCACCGGGAGACTAACCT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTGCTGCTGGTGTCCCTaGGGCTGTCATCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASCCWCP*GCHLGH
Trigger: GTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGCCACCGTCCACTTGTaGCGCCACACGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLATVHL*RHTLGL
Trigger: CAGACCAAGCGTGTGGCGGCACAAGTGGACGGTGGC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGCCACCGTCCACTTGTaGCGCCACACGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCATVHL*RHTLGL
Trigger: CAGACCAAGCGTGTGGCGGCACAAGTGGACGGTGGC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCAGGGGGAGGCTCAGCTaGTTCCAGCGCTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPRGRLS*FQRWKK
Trigger: CTTTTTCCAGCGCTGGAAGCAGCTGAGCCTCCCCCT...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTAGGGGGAGGCTCAGCTaGTTCCAGCGCTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATRGRLS*FQRWKK
Trigger: CTTTTTCCAGCGCTGGAAGCAGCTGAGCCTCCCCCT...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGCAGACACCCCACCTaGAGGGCCTTCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASSRHPT*RAFVWM
Trigger: CATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATGRQAL*WCAGLD
Trigger: GTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPGRQAL*WCAGLD
Trigger: GTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGACTTGGGAGGCTCCTaGGCCTTGTTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPDLGGS*ALLSTV
Trigger: GACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGACTTGGGAGGCTCCTaGGCCTTGTTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHDLGGS*ALLSTV
Trigger: GACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGTGCTGCACCTTCTTaGACTTGGGAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHSAAPS*TWEAPG
Trigger: CCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACT...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCGCGGACCAGGAGGTTaGGCTCACTGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATRGPGG*AHCHSG
Trigger: TCCACTATGACAGTGAGCCCAACCTCCTGGTCCGCG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGTCTTGACGGCCTCGTaGGAGAACTCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLVLTAS*ENSELA
Trigger: GGCCAGCTCCGAGTTCTCCCACGAGGCCGTCAAGAC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTGCTCCGGTCACACATaGCATACAGGAGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLCSGHT*HTGDQP
Trigger: CGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTTCTCATGACAGGCTaGGGCCTGGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATVLMTG*GLEGLK
Trigger: TTTGAGGCCCTCCAGGCCCCAGCCTGTCATGAGAAC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCAGAACCCCTTGGATaGTGGCCTTGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATAEPLG*WPWSQG
Trigger: TCCCTGAGACCAAGGCCACCATCCAAGGGGTTCTGC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGCAGAACCCCTTGGATaGTGGCCTTGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPAEPLG*WPWSQG
Trigger: TCCCTGAGACCAAGGCCACCATCCAAGGGGTTCTGC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGCACGCAGAACCCCTTaGATGGTGGCCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPARRTP*MVALVS
Trigger: TGAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCACGCAGAACCCCTTaGATGGTGGCCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATARRTP*MVALVS
Trigger: TGAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGGCTGGGCTGTGCAGTaGGGCCGTCAGAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASGWAVQ*GRQRRH
Trigger: ATGTCTTCTCTGACGGCCCCACTGCACAGCCCAGCC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCAGCCAACAAAGCCATaGGGCTCTCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAQPTKP*GSQGQG
Trigger: CCCCTGCCCCTGAGAGCCCCATGGCTTTGTTGGCTG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLAHRQQ*RRQEVS
Trigger: CGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTTCAGAGTGAGGGACTaGGCGGTGCCACCGTACCGG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAFRVRD*AVPPYR
Trigger: CCGGTACGGTGGCACCGCCCAGTCCCTCACTCTGAA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTTCAGAGTGAGGGACTaGGCGGTGCCACCGTACCGG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCFRVRD*AVPPYR
Trigger: CCGGTACGGTGGCACCGCCCAGTCCCTCACTCTGAA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCGCTGGAAAAAGTCTTaGGCCGCCATCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATRWKKS*AAISVG
Trigger: GCCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAAGCTGCTTCCAGCGCTaGAAAAAGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPSCFQR*KKSWAA
Trigger: GGCGGCCCAAGACTTTTTCCAGCGCTGGAAGCAGCT...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGAGCCGGATCAGTTCTaGGTTCGAGTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPEPDQF*VRVHQD
Trigger: GTCCTGGTGAACTCGAACTCAGAACTGATCCGGCTC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCATGTGCTGATCATTaGGCAAGTGCACTACACGTG +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAPCADH*ASALHV
Trigger: CACGTGTAGTGCACTTGCTCAATGATCAGCACATGG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCGTCATCACGGTTGGTaGCGATCTGCAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTARHHGW*RSAARG
Trigger: ACCGCGTGCTGCAGATCGTCACCAACCGTGATGACG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGTCATCACGGTTGGTaGCGATCTGCAGCACGCGGT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLRHHGW*RSAARG
Trigger: ACCGCGTGCTGCAGATCGTCACCAACCGTGATGACG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGCTCCACACCCCCATTaGTGTCATTGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPAPHPH*CHCCWC
Trigger: ACACCAGCAGCAATGACATCAATGGGGGTGTGGAGC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGCAGACACTCAATGTTaGGTACTTGCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAADTQC*VLAAPV
Trigger: CACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCTCGGGTGGTTGGCTTTaGAGATTTTCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRASGGWL*RFSVPP
Trigger: AGGAGGCACAGAAAATCTTCAAAGCCAACCACCCGA...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCAGCCTCTTTGCTCTTaGAGTTCCGGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLQPLCS*SSGCRR
Trigger: TCTCCGACATCCGGAACTGCAAGAGCAAAGAGGCTG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCTTCACACTGTCCATaGTGTCCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASASHCP*CPQPPG
Trigger: TCCTGGTGGCTGGGGACAGCATGGACAGTGTGAAGC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCAAGTGCACTACACGTaGCGTCCACTCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCQVHYT*RPLAHG
Trigger: CCCATGGGCGAGTGGACGGCACGTGTAGTGCACTTG...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCAAGTGCACTACACGTaGCGTCCACTCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPQVHYT*RPLAHG
Trigger: CCCATGGGCGAGTGGACGGCACGTGTAGTGCACTTG...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTAGGTTAGTCTCCCGGTaGTGCAGGAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTARLVSR*CRNWPS
Trigger: GCTGGGCCAGTTCCTGCAGCACCGGGAGACTAACCT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGAGATCAGCCGCCCGCTaGCTCACACTGACGTCCCGC +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGRSAAR*LTLTSR
Trigger: GCGGGACGTCAGTGTGAGGCAGCGGGCGGCTGATCT...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCCCCAGGGCCCTTCTTaGGCTTCAGCTTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAPQGPS*ASAWPR
Trigger: TCTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGCCCCAGGCTGGGCTGTaGAGTGGGGCCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGPQAGL*SGAVRE
Trigger: TTCTCTGACGGCCCCACTGCACAGCCCAGCCTGGGG...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGGGGGAGGCTCAGCTaGTTCCAGCGCTGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASRGRLS*FQRWKK
Trigger: CTTTTTCCAGCGCTGGAAGCAGCTGAGCCTCCCCCT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTAGCAGACACCCCACCTaGAGGGCCTTCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTASRHPT*RAFVWM
Trigger: CATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTAGCAGACACCCCACCTaGAGGGCCTTCGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPSRHPT*RAFVWM
Trigger: CATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCT...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTGCTCCGGTCACACATaGCATACAGGAGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATCSGHT*HTGDQP
Trigger: CGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAACCCCTTGGATGGTaGCCTTGGTCTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATEPLGW*PWSQGR
Trigger: TCTTCCCTGAGACCAAGGCCACCATCCAAGGGGTTC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGAACCCCTTGGATGGTaGCCTTGGTCTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPEPLGW*PWSQGR
Trigger: TCTTCCCTGAGACCAAGGCCACCATCCAAGGGGTTC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCAGAACCCCTTGGATaGTGGCCTTGGTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASAEPLG*WPWSQG
Trigger: TCCCTGAGACCAAGGCCACCATCCAAGGGGTTCTGC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTGTCATCTAGGGCACTaGCTGCCCCAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLCHLGH*LPQGPS
Trigger: AGAAGGGCCCTGGGGCAGCCAGTGCCCTAGATGACA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTGTCATCTAGGGCACTaGCTGCCCCAGGGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLCHLGH*LPQGPS
Trigger: AGAAGGGCCCTGGGGCAGCCAGTGCCCTAGATGACA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGGCTGGGCTGTGCAGTaGGGCCGTCAGAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLGWAVQ*GRQRRH
Trigger: ATGTCTTCTCTGACGGCCCCACTGCACAGCCCAGCC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGGCTGGGCTGTGCAGTaGGGCCGTCAGAGAAGACAT +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLGWAVQ*GRQRRH
Trigger: ATGTCTTCTCTGACGGCCCCACTGCACAGCCCAGCC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGTCAGCAGCTGGAGCTaGGTCAGCCAACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPVSSWS*VSQQSH
Trigger: ATGGCTTTGTTGGCTGACCCAGCTCCAGCTGCTGAC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCACCTGGGTCAGCAGCTaGAGCTGGGTCAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASTWVSS*SWVSQQ
Trigger: TTGTTGGCTGACCCAGCTCCAGCTGCTGACCCAGGT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCGCTGGAAAAAGTCTTaGGCCGCCATCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASRWKKS*AAISVG
Trigger: GCCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGCTGCTTCCAGCGCTaGAAAAAGTCTTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASSCFQR*KKSWAA
Trigger: GGCGGCCCAAGACTTTTTCCAGCGCTGGAAGCAGCT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTTTGGGCCTGGGCATTaGGCTCCAGCCGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCFGPGH*APAEAD
Trigger: GTCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTTTGGGCCTGGGCATTaGGCTCCAGCCGAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLFGPGH*APAEAD
Trigger: GTCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCGGTACATTTGGGCCTaGGCATTGGGCTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTARYIWA*ALGSSR
Trigger: TCGGCTGGAGCCCAATGCCCAGGCCCAAATGTACCG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTTAGACGGTACATTTaGGCCTGGGCATTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATVRRYI*AWALGS
Trigger: GGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAAC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAAGACAGGCTCTTTGCTaGTGCGCAGGGTTAGACGGT +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPRQALC*CAGLDG
Trigger: ACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCT...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCCATGTGCTGATCATTaGGCAAGTGCACTACACGTG +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLPCADH*ASALHV
Trigger: CACGTGTAGTGCACTTGCTCAATGATCAGCACATGG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTTCACCATGTTCTCATaGCAGGCTGGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPFTMFS*QAGAWR
Trigger: CCTCCAGGCCCCAGCCTGTCATGAGAACATGGTGAA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGCAGCTCACACAAGTaGCGGGAGACAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASSSSHK*RETGSL
Trigger: CAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCAGCCTCTTTGCTCTTaGAGTTCCGGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATQPLCS*SSGCRR
Trigger: TCTCCGACATCCGGAACTGCAAGAGCAAAGAGGCTG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGCTTCACACTGTCCATaGTGTCCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLASHCP*CPQPPG
Trigger: TCCTGGTGGCTGGGGACAGCATGGACAGTGTGAAGC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGCTTCACACTGTCCATaGTGTCCCCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCASHCP*CPQPPG
Trigger: TCCTGGTGGCTGGGGACAGCATGGACAGTGTGAAGC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCATAGGGCGGCACTCTaGTTCACACTGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASHRAAL*FTLSML
Trigger: CAGCATGGACAGTGTGAAGCAGAGTGCCGCCCTATG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGCCACCGTCCACTTGTaGCGCCACACGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGATVHL*RHTLGL
Trigger: CAGACCAAGCGTGTGGCGGCACAAGTGGACGGTGGC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTTTGAAGATTTTCTGTaGCTCCTGCAGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLFEDFL*LLQGEA
Trigger: AGCCTCCCCCTGCAGGAGGCACAGAAAATCTTCAAA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGAC +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAGRQAL*WCAGLD
Trigger: GTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTAGTCCTGGAGGTCAGTaGAGGCTGAGGAGACGATCC +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPSPGGQ*RLRRRS
Trigger: GGATCGTCTCCTCAGCCTCCACTGACCTCCAGGACT...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTGCATCCTCTGGTGGTaGGTAACACTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTACILWW*VTLEQP
Trigger: CGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTGCATCCTCTGGTGGTaGGTAACACTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCCILWW*VTLEQP
Trigger: CGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTGCATCCTCTGGTGGTaGGTAACACTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPCILWW*VTLEQP
Trigger: CGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGACTTGGGAGGCTCCTaGGCCTTGTTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPDLGGS*ALLSTV
Trigger: GACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGACTTGGGAGGCTCCTaGGCCTTGTTGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLDLGGS*ALLSTV
Trigger: GACTGTGCTCAACAAGGCCCAGGAGCCTCCCAAGTC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTAGTGCTGCACCTTCTTaGACTTGGGAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTASAAPS*TWEAPG
Trigger: CCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGAGTGCTGCACCTTCTTaGACTTGGGAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLSAAPS*TWEAPG
Trigger: CCCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCGCGGACCAGGAGGTTaGGCTCACTGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCRGPGG*AHCHSG
Trigger: TCCACTATGACAGTGAGCCCAACCTCCTGGTCCGCG...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCTGACACAATCTGCTTaGCATTGCTCCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLLTQSA*HCSGHT
Trigger: TGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGTTCTCATGACAGGCTaGGGCCTGGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLVLMTG*GLEGLK
Trigger: TTTGAGGCCCTCCAGGCCCCAGCCTGTCATGAGAAC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGTTCTCATGACAGGCTaGGGCCTGGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLVLMTG*GLEGLK
Trigger: TTTGAGGCCCTCCAGGCCCCAGCCTGTCATGAGAAC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCTGCACAGGTGGAACTTaGAGTGCAGCAGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPCTGGT*SAAART
Trigger: AGTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCA...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGAACCCCTTGGATGGTaGCCTTGGTCTCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASEPLGW*PWSQGR
Trigger: TCTTCCCTGAGACCAAGGCCACCATCCAAGGGGTTC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCACGCAGAACCCCTTaGATGGTGGCCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAARRTP*MVALVS
Trigger: TGAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGCACGCAGAACCCCTTaGATGGTGGCCTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPARRTP*MVALVS
Trigger: TGAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTATGTCCTCAGGACCTaGGTCAGCAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAYVLRT*VSSWSW
Trigger: CCAGCTCCAGCTGCTGACCCAGGTCCTGAGGACATA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTATGTCCTCAGGACCTaGGTCAGCAGCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLYVLRT*VSSWSW
Trigger: CCAGCTCCAGCTGCTGACCCAGGTCCTGAGGACATA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCGCTGGAAAAAGTCTTaGGCCGCCATCTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTARWKKS*AAISVG
Trigger: GCCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTATGTCCTCAGGACCTaGGCTGAGGAAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPYVLRT*AEEGLL
Trigger: GAGGAGGCCTTCCTCAGCCCAGGTCCTGAGGACATA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGAGCCGGATCAGTTCTaGGTTCGAGTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCEPDQF*VRVHQD
Trigger: GTCCTGGTGAACTCGAACTCAGAACTGATCCGGCTC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTCCACACCCCCATTaGTGTCATTGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAAPHPH*CHCCWC
Trigger: ACACCAGCAGCAATGACATCAATGGGGGTGTGGAGC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGCCGGAACTCAGACTTaGCTCCAATCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLAGTQT*LQSAAA
Trigger: AGCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCGGAACTCAGACTTaGCTCCAATCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAAGTQT*LQSAAA
Trigger: AGCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGCAGACACTCAATGTTaGGTACTTGCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHADTQC*VLAAPV
Trigger: CACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCTCGGGTGGTTGGCTTTaGAGATTTTCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPSGGWL*RFSVPP
Trigger: AGGAGGCACAGAAAATCTTCAAAGCCAACCACCCGA...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACTCGGGTGGTTGGCTTTaGAGATTTTCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHSGGWL*RFSVPP
Trigger: AGGAGGCACAGAAAATCTTCAAAGCCAACCACCCGA...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAGCAGCTCACACAAGTaGCGGGAGACAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCSSSHK*RETGSL
Trigger: CAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATAGGGCGGCACTCTaGTTCACACTGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLHRAAL*FTLSML
Trigger: CAGCATGGACAGTGTGAAGCAGAGTGCCGCCCTATG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCATAGGGCGGCACTCTaGTTCACACTGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAHRAAL*FTLSML
Trigger: CAGCATGGACAGTGTGAAGCAGAGTGCCGCCCTATG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCACAGAGAGCCAGGGTaGAGGAACGAAGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATHREPG*RNEVVS
Trigger: ACTTACTACTTCGTTCCTGCACCCTGGCTCTCTGTG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCTTCTTGGCGTTGGAGTaGTGCACCTTCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPFLALE*CTFLDL
Trigger: CAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAA...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTTAGTCTCCCGGTGCTaGAGGAACTGGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGLVSRC*RNWPSW
Trigger: CCAGCTGGGCCAGTTCCTGCAGCACCGGGAGACTAA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCAATCTGCTTGGCATTaGTCCGGTCACACATGGCAT +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATQSAWH*SGHTWH
Trigger: ATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACAATCTGCTTGGCATTaGTCCGGTCACACATGGCAT +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPQSAWH*SGHTWH
Trigger: ATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCCAATCTGCTTGGCATTaGTCCGGTCACACATGGCAT +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPQSAWH*SGHTWH
Trigger: ATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTG...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTGCTCCGGTCACACATaGCATACAGGAGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLCSGHT*HTGDQP
Trigger: CGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTGCTCCGGTCACACATaGCATACAGGAGATCAGCCG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLCSGHT*HTGDQP
Trigger: CGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCCTGACACAATCTGCTTaGCATTGCTCCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPLTQSA*HCSGHT
Trigger: TGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAG...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCTGACACAATCTGCTTaGCATTGCTCCGGTCACACA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATLTQSA*HCSGHT
Trigger: TGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPQFICF*NGRAYV
Trigger: GACATAGGCCCTCCCATTCCAGAAGCAGATGAACTG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGTTAGACGGTACATTTaGGCCTGGGCATTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLVRRYI*AWALGS
Trigger: GGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAAC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGTTAGACGGTACATTTaGGCCTGGGCATTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPVRRYI*AWALGS
Trigger: GGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAAC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGAGACAGGCTCTTTGCTaGTGCGCAGGGTTAGACGGT +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLRQALC*CAGLDG
Trigger: ACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAGACAGGCTCTTTGCTaGTGCGCAGGGTTAGACGGT +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCRQALC*CAGLDG
Trigger: ACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASVPQHL*HNLLGI
Trigger: AATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTAC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTTCACCATGTTCTCATaGCAGGCTGGGGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGFTMFS*QAGAWR
Trigger: CCTCCAGGCCCCAGCCTGTCATGAGAACATGGTGAA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCTGGAAGAATTTGTTaGTGGTCACTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATAGRIC*WSLGAS
Trigger: TGAAGCTCCCAGTGACCATCAACAAATTCTTCCAGC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAGCCTCTTTGCTCTTaGAGTTCCGGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLQPLCS*SSGCRR
Trigger: TCTCCGACATCCGGAACTGCAAGAGCAAAGAGGCTG...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCACGTTAGCGATACAGTaGAAGGCCAGGCACATGAAG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASTLAIQ*KARHMK
Trigger: CTTCATGTGCCTGGCCTTGCACTGTATCGCTAACGT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCACAGAGAGCCAGGGTaGAGGAACGAAGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASHREPG*RNEVVS
Trigger: ACTTACTACTTCGTTCCTGCACCCTGGCTCTCTGTG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTTCTTGGCGTTGGAGTaGTGCACCTTCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASFLALE*CTFLDL
Trigger: CAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCAATCTGCTTGGCATTaGTCCGGTCACACATGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASQSAWH*SGHTWH
Trigger: ATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGC +
Preference number: 4 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAAQKSC*HRRDTC
Trigger: GCATGTATCTCTTCTATGGCAACAAGACTTCTGTGC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGTTCTCATGACAGGCTaGGGCCTGGAGGGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGVLMTG*GLEGLK
Trigger: TTTGAGGCCCTCCAGGCCCCAGCCTGTCATGAGAAC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTGCACAGGTGGAACTTaGAGTGCAGCAGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPCTGGT*SAAART
Trigger: AGTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTGCACAGGTGGAACTTaGAGTGCAGCAGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLCTGGT*SAAART
Trigger: AGTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASQFICF*NGRAYV
Trigger: GACATAGGCCCTCCCATTCCAGAAGCAGATGAACTG...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTGGGCAAGAAGTTCTaGAACTGCACAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATVGKKF*NCTEVL
Trigger: CAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCAC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGTGGGCAAGAAGTTCTaGAACTGCACAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPVGKKF*NCTEVL
Trigger: CAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCAC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGAGCCGGATCAGTTCTaGGTTCGAGTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGEPDQF*VRVHQD
Trigger: GTCCTGGTGAACTCGAACTCAGAACTGATCCGGCTC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCCATGTGCTGATCATTaGGCAAGTGCACTACACGTG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLPCADH*ASALHV
Trigger: CACGTGTAGTGCACTTGCTCAATGATCAGCACATGG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCVPQHL*HNLLGI
Trigger: AATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTAC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPVPQHL*HNLLGI
Trigger: AATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTAC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGCTCCACACCCCCATTaGTGTCATTGCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGAPHPH*CHCCWC
Trigger: ACACCAGCAGCAATGACATCAATGGGGGTGTGGAGC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAGACACTCAATGTTaGGTACTTGCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAADTQC*VLAAPV
Trigger: CACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTCGGGTGGTTGGCTTTaGAGATTTTCTGTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLSGGWL*RFSVPP
Trigger: AGGAGGCACAGAAAATCTTCAAAGCCAACCACCCGA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGAGCAGCTCACACAAGTaGCGGGAGACAGGCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGSSSHK*RETGSL
Trigger: CAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCT...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCACAGAGAGCCAGGGTaGAGGAACGAAGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCHREPG*RNEVVS
Trigger: ACTTACTACTTCGTTCCTGCACCCTGGCTCTCTGTG...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTTCTTGGCGTTGGAGTaGTGCACCTTCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLFLALE*CTFLDL
Trigger: CAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTTCTTGGCGTTGGAGTaGTGCACCTTCTTGGACTTG +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCFLALE*CTFLDL
Trigger: CAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTTTGAAGATTTTCTGTaGCTCCTGCAGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAFEDFL*LLQGEA
Trigger: AGCCTCCCCCTGCAGGAGGCACAGAAAATCTTCAAA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTTTGAAGATTTTCTGTaGCTCCTGCAGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLFEDFL*LLQGEA
Trigger: AGCCTCCCCCTGCAGGAGGCACAGAAAATCTTCAAA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGTAAGTGTAGTCCTGGAGGTCAGTGGAGGCTGAGGAGACGATCCGGCTTAAGCCCGTCCACTCGCCCATaGGCACCAAGTCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SKCSPGGQWRLRRRSGLSPSTRP*APSRAR
Trigger: CCTCGCCCGACTTGGTGCCCATGGGCGAGTGGACGG...GCTTAAGCCGGATCGTCTCCTCAGCCTCCACTGACCTCCAGGACTACACTTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR CCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGTCAGCAGCTGGAGCTaGGTCAGCCAACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGVSSWS*VSQQSH
Trigger: ATGGCTTTGTTGGCTGACCCAGCTCCAGCTGCTGAC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLQFICF*NGRAYV
Trigger: GACATAGGCCCTCCCATTCCAGAAGCAGATGAACTG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTTTGTTGATGGTCACTaGGAGCTTCAGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASFVDGH*ELQSEG
Trigger: TCCCTCACTCTGAAGCTCCCAGTGACCATCAACAAA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCATCAGCATCCATCGGGTaGTTGGCTTTGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPSASIG*LALKIF
Trigger: GAAAATCTTCAAAGCCAACCACCCGATGGATGCTGA...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTCAGCATCCATCGGGTaGTTGGCTTTGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATSASIG*LALKIF
Trigger: GAAAATCTTCAAAGCCAACCACCCGATGGATGCTGA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACAAAGTTCTCAGGGTTaGGATCCACATTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPQSSQG*DPHCPE
Trigger: TTCTGGACAATGTGGATCCCAACCCTGAGAACTTTG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACCAAAGTTCTCAGGGTTaGGATCCACATTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHQSSQG*DPHCPE
Trigger: TTCTGGACAATGTGGATCCCAACCCTGAGAACTTTG...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTGGAAGAATTTGTTaGTGGTCACTGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAAGRIC*WSLGAS
Trigger: TGAAGCTCCCAGTGACCATCAACAAATTCTTCCAGC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GCTTGGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCCCATAGGGCGGCACTCTaGTTCACACTGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: AWHCSGHTWHTGDQPPAAHRAAL*FTLSML
Trigger: CAGCATGGACAGTGTGAAGCAGAGTGCCGCCCTATG...GGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGATCTCTGACACAATCTaGTTGGCATTGCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLISDTI*LALLRS
Trigger: TGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGAT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCATCTCTGACACAATCTaGTTGGCATTGCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCISDTI*LALLRS
Trigger: TGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGAT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTATCTCTGACACAATCTaGTTGGCATTGCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAISDTI*LALLRS
Trigger: TGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGAT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGC +
Preference number: 4 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPAQKSC*HRRDTC
Trigger: GCATGTATCTCTTCTATGGCAACAAGACTTCTGTGC...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGTGGGCAAGAAGTTCTaGAACTGCACAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLVGKKF*NCTEVL
Trigger: CAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCAC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTTTGTTGATGGTCACTaGGAGCTTCAGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLFVDGH*ELQSEG
Trigger: TCCCTCACTCTGAAGCTCCCAGTGACCATCAACAAA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTCACCAGGACTGAGATaGACAGGTACCCTATCTGCT +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGSPGLR*TGTLSA
Trigger: AGCAGATAGGGTACCTGTTCATCTCAGTCCTGGTGA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATT +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGVPQHL*HNLLGI
Trigger: AATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTAC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTCAGCATCCATCGGGTaGTTGGCTTTGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCSASIG*LALKIF
Trigger: GAAAATCTTCAAAGCCAACCACCCGATGGATGCTGA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCAAAGTTCTCAGGGTTaGGATCCACATTGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCQSSQG*DPHCPE
Trigger: TTCTGGACAATGTGGATCCCAACCCTGAGAACTTTG...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGC +
Preference number: 4 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLAQKSC*HRRDTC
Trigger: GCATGTATCTCTTCTATGGCAACAAGACTTCTGTGC...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGC +
Preference number: 4 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCAQKSC*HRRDTC
Trigger: GCATGTATCTCTTCTATGGCAACAAGACTTCTGTGC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTTTGTTGATGGTCACTaGGAGCTTCAGAGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGFVDGH*ELQSEG
Trigger: TCCCTCACTCTGAAGCTCCCAGTGACCATCAACAAA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGGCATTGCTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCCTCACCATGTGCTGATCATTaGGCAAGTGCACTACACGTG +
Preference number: 4 (lower is better)
Translates to: WHCSGHTWHTGDQPPAASPCADH*ASALHV
Trigger: CACGTGTAGTGCACTTGCTCAATGATCAGCACATGG...TGAGGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCCGTCCACTCGCCCATaGGCACCAAGTCGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREPSTRP*APSRAR
Trigger: CCTCGCCCGACTTGGTGCCCATGGGCGAGTGGACGG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGGGTCGACACAGTGCTaGGGGTGGGCTCCACACCCC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREGSTQC*GWAPHP
Trigger: GGGGTGTGGAGCCCACCCCCAGCACTGTGTCGACCC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TGCTTCTCCGTGTACTTGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGTCCATCCGGATGTCGGAGATaGACACGGCGAGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: CFSVYLLELSRFTASICPSGCRR*TRRAHA
Trigger: TGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGA...TGGACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS-3UTR GCA 90 bp GCCAGGGAGATACAGGTCTTGAAGTCATCCGGATTCTTCTTGCAGAGACAGGTGCAAGTGCACTACACGTaGCGTCCACTCGCCCATGGG +
Preference number: 4 (lower is better)
Translates to: AREIQVLKSSGFFLQRQVQVHYT*RPLAHG
Trigger: CCCATGGGCGAGTGGACGGCACGTGTAGTGCACTTG...CACCTGTCTCTGCAAGAAGAATCCGGATGACTTCAAGACCTGTATCTCCCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCCCCAGGCTGGGCTGTaGAGTGGGGCCGTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREPQAGL*SGAVRE
Trigger: TTCTCTGACGGCCCCACTGCACAGCCCAGCCTGGGG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERESGCRR*TRRAHA
Trigger: TGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGTCTTGACGGCCTCGTaGGAGAACTCGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREVLTAS*ENSELA
Trigger: GGCCAGCTCCGAGTTCTCCCACGAGGCCGTCAAGAC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCAGCCAACAAAGCCATaGGGCTCTCAGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREQPTKP*GSQGQG
Trigger: CCCCTGCCCCTGAGAGCCCCATGGCTTTGTTGGCTG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREAHRQQ*RRQEVS
Trigger: CGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR CAA 72 bp AGGCTAATGGTCTCAAAGAGGATAGCGTTCTTGGCGTaGGAGTGCTGCACCTTCTTGGACTTGGGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RLMVSKRIAFLA*ECCTFLDLGGS
Trigger: GGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTATCCTCTTTGAGACCATTAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGAGGTTAGTCTCCCGGTaGTGCAGGAACTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERERLVSR*CRNWPS
Trigger: GCTGGGCCAGTTCCTGCAGCACCGGGAGACTAACCT...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCCCCAGGGCCCTTCTTaGGCTTCAGCTTGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREPQGPS*ASAWPR
Trigger: TCTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTGCTGCTGGTGTCCCTaGGGCTGTCATCTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERECCWCP*GCHLGH
Trigger: GTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCGGTACATTTGGGCCTaGGCATTGGGCTCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERERYIWA*ALGSSR
Trigger: TCGGCTGGAGCCCAATGCCCAGGCCCAAATGTACCG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp ACGATCCGGCTTAAGCGAGACACAGCCAGGGAGATACAGGTCTTGAAGTCATCCCATGCTGGGTGTCACTaGGAAAGCCCATGTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TIRLKRDTAREIQVLKSSHAGCH*ESPCAD
Trigger: ATCAGCACATGGGCTTTCCCAGTGACACCCAGCATG...GGATGACTTCAAGACCTGTATCTCCCTGGCTGTGTCTCGCTTAAGCCGGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTGCATCCTCTGGTGGTaGGTAACACTGGAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERECILWW*VTLEQP
Trigger: CGGCTGCTCCAGTGTTACCCACCACCAGAGGATGCA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCGCGGACCAGGAGGTTaGGCTCACTGTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERERGPGG*AHCHSG
Trigger: TCCACTATGACAGTGAGCCCAACCTCCTGGTCCGCG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGACCTGGGTCAGCAGCTaGAGCTGGGTCAGCCAACAA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERETWVSS*SWVSQQ
Trigger: TTGTTGGCTGACCCAGCTCCAGCTGCTGACCCAGGT...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR TCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGCCGGAACTCAGACTTaGCTCCAATCTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREAGTQT*LQSAAA
Trigger: AGCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCATAGGGCGGCACTCTaGTTCACACTGTCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREHRAAL*FTLSML
Trigger: CAGCATGGACAGTGTGAAGCAGAGTGCCGCCCTATG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGTTAGACGGTACATTTaGGCCTGGGCATTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREVRRYI*AWALGS
Trigger: GGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAAC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCAGCCTCTTTGCTCTTaGAGTTCCGGATGTCGGAGA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREQPLCS*SSGCRR
Trigger: TCTCCGACATCCGGAACTGCAAGAGCAAAGAGGCTG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTGCACAGGTGGAACTTaGAGTGCAGCAGCGAGAACT +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGERECTGGT*SAAART
Trigger: AGTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR TCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCCATGTGCTGATCATTaGGCAAGTGCACTACACGTG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREPCADH*ASALHV
Trigger: CACGTGTAGTGCACTTGCTCAATGATCAGCACATGG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCACAGAGAGCCAGGGTaGAGGAACGAAGTAGTAAGT +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREHREPG*RNEVVS
Trigger: ACTTACTACTTCGTTCCTGCACCCTGGCTCTCTGTG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTTTGAAGATTTTCTGTaGCTCCTGCAGGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREFEDFL*LLQGEA
Trigger: AGCCTCCCCCTGCAGGAGGCACAGAAAATCTTCAAA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTC +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREQFICF*NGRAYV
Trigger: GACATAGGCCCTCCCATTCCAGAAGCAGATGAACTG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR CAA 72 bp GAGATGAACAGGTACCCTATCTGCTTCTCCGTGTACTaGTTAGAGCTTAGCAGGTTCACGGCCTCCATATGT +
Preference number: 4 (lower is better)
Translates to: EMNRYPICFSVY*LELSRFTASIC
Trigger: ACATATGGAGGCCGTGAACCTGCTAAGCTCTAACAAGTACACGGAGAAGCAGATAGGGTACCTGTTCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS-3UTR GCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGATCTCTGACACAATCTaGTTGGCATTGCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREISDTI*LALLRS
Trigger: TGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGAT...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CCA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGTGGGCAAGAAGTTCTaGAACTGCACAGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREVGKKF*NCTEVL
Trigger: CAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCAC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
3UTR CAA 72 bp TCCTTGTTGATCCTCTTGATCTCAGCCTCTTTGCTCTaGCCTTTAATCCCAGAACTTAGAAGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLLILLISASLL*PLIPELRRLRQ
Trigger: CTGCCTCAGCCTTCTAAGTTCTGGGATTAAAGGCAAGAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAACTGGCCCAGCTGGTaGCAGGCGCGGACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLNWPSW*QARTRR
Trigger: CCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTAACTGGCCCAGCTGGTaGCAGGCGCGGACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATNWPSW*QARTRR
Trigger: CCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTT...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCAACTGGCCCAGCTGGTaGCAGGCGCGGACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASNWPSW*QARTRR
Trigger: CCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGCACGCAGAACCCCTaGGATGGTGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLGTQNP*DGGLGL
Trigger: GAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGCC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGCCCCAGGGCCCTTCTaGCGCTTCAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHAPGPF*RFSLAK
Trigger: CTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGGC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAPPLMS*LLVSLR
Trigger: CCGCAGGGACACCAGCAGCAATGACATCAATGGGGG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
70% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGCGCTGGAAAAAGTCTaGGGCCGCCATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAALEKV*GRHLCG
Trigger: CCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCGC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGGAGGCTCCTGGGCCTaGTTGAGCACAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLGGSWA*LSTVSR
Trigger: TCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCTCC...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCAACTGGCCCAGCTGGTaGCAGGCGCGGACCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCNWPSW*QARTRR
Trigger: CCTCCTGGTCCGCGCCTGCAACCAGCTGGGCCAGTT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCTGCACAGGTGGAACTaGGAGTGCAGCAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: GSSQAPPPRALCCRHWRALHRWN*ECSSEN
Trigger: GTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCAG...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCCCCAGGGCCCTTCTaGCGCTTCAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASAPGPF*RFSLAK
Trigger: CTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGGC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLPPLMS*LLVSLR
Trigger: CCGCAGGGACACCAGCAGCAATGACATCAATGGGGG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGGAGGCTCCTGGGCCTaGTTGAGCACAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPGGSWA*LSTVSR
Trigger: TCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCTCC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGAGTGCTGCACCTTCTaGGACTTGGGAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATECCTF*DLGGSW
Trigger: CCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGAGTGCTGCACCTTCTaGGACTTGGGAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHECCTF*DLGGSW
Trigger: CCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTGGACGTCATCACGGTaGGTGACGATCTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLWTSSR*VTICST
Trigger: CGTGCTGCAGATCGTCACCAACCGTGATGACGTCCA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCTGCACAGGTGGAACTaGGAGTGCAGCAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLLHRWN*ECSSEN
Trigger: GTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCAG...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGCCCCAGGGCCCTTCTaGCGCTTCAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCAPGPF*RFSLAK
Trigger: CTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGGC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPPPLMS*LLVSLR
Trigger: CCGCAGGGACACCAGCAGCAATGACATCAATGGGGG...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGCGCTGGAAAAAGTCTaGGGCCGCCATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATALEKV*GRHLCG
Trigger: CCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCGC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCATTTGGGCCTGGGCATaGGGCTCCAGCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPIWAWA*GSSRSR
Trigger: TCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAAT...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACATTTGGGCCTGGGCATaGGGCTCCAGCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHIWAWA*GSSRSR
Trigger: TCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAAT...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGGAGGCTCCTGGGCCTaGTTGAGCACAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASGGSWA*LSTVSR
Trigger: TCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCTCC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGCGATGCGGATGAGGTaGAGGATGGTGTCCACGTAC +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHAMRMR*RMVSTY
Trigger: GTACGTGGACACCATCCTCAACCTCATCCGCATCGC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGCGATGCGGATGAGGTaGAGGATGGTGTCCACGTAC +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPAMRMR*RMVSTY
Trigger: GTACGTGGACACCATCCTCAACCTCATCCGCATCGC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCCTGCACAGGTGGAACTaGGAGTGCAGCAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPLHRWN*ECSSEN
Trigger: GTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCAG...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGGCACGCAGAACCCCTaGGATGGTGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPGTQNP*DGGLGL
Trigger: GAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGCC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTGCCGGAACTCAGACTaGACTCCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLCRNSD*TPICSS
Trigger: GCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGCA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 90 bp CTTGCTGCACCTGTGCGCCACCGTCCACTTGTGCCGCCACACGCTTaGTCTGCACCGCCAGCTGAGTCTGGAGGTCCCCAGGATGGACCA +
Preference number: 5 (lower is better)
Translates to: LAAPVRHRPLVPPHA*SAPPAESGGPQDGP
Trigger: TGGTCCATCCTGGGGACCTCCAGACTCAGCTGGCGGTGCAGACCAAGCGTGTGGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS-3UTR CAA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCAAGGCCTTGTCCCCTTaGAACTTGGAACGGATGTTG +
Preference number: 5 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAKALSP*NLERML
Trigger: CAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGGAGGCTCCTGGGCCTaGTTGAGCACAGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPGGSWA*LSTVSR
Trigger: TCTGGAGACTGTGCTCAACAAGGCCCAGGAGCCTCC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGAGTGCTGCACCTTCTaGGACTTGGGAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAECCTF*DLGGSW
Trigger: CCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGAGTGCTGCACCTTCTaGGACTTGGGAGGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCECCTF*DLGGSW
Trigger: CCAGGAGCCTCCCAAGTCCAAGAAGGTGCAGCACTC...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTCTGACACAATCTGCTaGGCATTGCTCCGGTCACAC +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLSDTIC*ALLRSH
Trigger: GTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGA...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTGGACGTCATCACGGTaGGTGACGATCTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASWTSSR*VTICST
Trigger: CGTGCTGCAGATCGTCACCAACCGTGATGACGTCCA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTCCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGG +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAPPLMS*LLVSLR
Trigger: CCGCAGGGACACCAGCAGCAATGACATCAATGGGGG...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCATGCCGGAACTCAGACTaGACTCCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPCRNSD*TPICSS
Trigger: GCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGCA...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCGGCTGGAAGAATTTGTaGATGGTCACTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSSQAPPPRALCCRHWRAGWKNL*MVTGSF
Trigger: GAAGCTCCCAGTGACCATCAACAAATTCTTCCAGCC...GGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTGCGCTGGAAAAAGTCTaGGGCCGCCATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPALEKV*GRHLCG
Trigger: CCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCGC...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTATTTGGGCCTGGGCATaGGGCTCCAGCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPIWAWA*GSSRSR
Trigger: TCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAAT...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTATTTGGGCCTGGGCATaGGGCTCCAGCCGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAIWAWA*GSSRSR
Trigger: TCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAAT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGGGAGACAGGCTCTTaGCTGGTGCGCAGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPRETGS*LVRRVR
Trigger: TCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCG...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGGGAGACAGGCTCTTaGCTGGTGCGCAGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLRETGS*LVRRVR
Trigger: TCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCGGGAGACAGGCTCTTaGCTGGTGCGCAGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLRETGS*LVRRVR
Trigger: TCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCG...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACATAGCGTTCTTGGCGTaGGAGTGCTGCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHIAFLA*ECCTFL
Trigger: CAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTAT...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTCTGACACAATCTGCTaGGCATTGCTCCGGTCACAC +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATSDTIC*ALLRSH
Trigger: GTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACTCTGACACAATCTGCTaGGCATTGCTCCGGTCACAC +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHSDTIC*ALLRSH
Trigger: GTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGA...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGCGATGCGGATGAGGTaGAGGATGGTGTCCACGTAC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLAMRMR*RMVSTY
Trigger: GTACGTGGACACCATCCTCAACCTCATCCGCATCGC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTGGACGTCATCACGGTaGGTGACGATCTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPWTSSR*VTICST
Trigger: CGTGCTGCAGATCGTCACCAACCGTGATGACGTCCA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTGCACAGGTGGAACTaGGAGTGCAGCAGCGAGAAC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLLHRWN*ECSSEN
Trigger: GTTCTCGCTGCTGCACTCCAAGTTCCACCTGTGCAG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGGCACGCAGAACCCCTaGGATGGTGGCCTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGGTQNP*DGGLGL
Trigger: GAGACCAAGGCCACCATCCAAGGGGTTCTGCGTGCC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTGCCGGAACTCAGACTaGACTCCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASCRNSD*TPICSS
Trigger: GCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGCA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACGTGGGCTGGAAGAATTaGTTGATGGTCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHVGWKN*LMVTGS
Trigger: GCTCCCAGTGACCATCAACAAATTCTTCCAGCCCAC...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGTGGGCTGGAAGAATTaGTTGATGGTCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATVGWKN*LMVTGS
Trigger: GCTCCCAGTGACCATCAACAAATTCTTCCAGCCCAC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGATCGGGTGGTTGGCTTaGAAGATTTTCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLIGWLA*KIFCAS
Trigger: GGAGGCACAGAAAATCTTCAAAGCCAACCACCCGAT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGGGTTGGGATCCACATaGTCCAGAAGAGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASGLGST*SRRAEP
Trigger: TGGCTCTGCTCTTCTGGACAATGTGGATCCCAACCC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTTTGTCCCCTTTGAACTaGGAACGGATGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATLSPLN*ERMLAS
Trigger: ACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAA...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATAGCGTTCTTGGCGTaGGAGTGCTGCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASIAFLA*ECCTFL
Trigger: CAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTAT...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTTCTTGCGCTTCAGCTaGGCCAAGATGGACGACTCC +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAFLRFS*AKMDDS
Trigger: GGAGTCGTCCATCTTGGCCAAGCTGAAGCGCAAGAA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTTCTTGCGCTTCAGCTaGGCCAAGATGGACGACTCC +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLFLRFS*AKMDDS
Trigger: GGAGTCGTCCATCTTGGCCAAGCTGAAGCGCAAGAA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTTTCTTGCGCTTCAGCTaGGCCAAGATGGACGACTCC +
Preference number: 5 (lower is better)
Translates to: LCCRHWRAPRCPAPPQLPFLRFS*AKMDDS
Trigger: GGAGTCGTCCATCTTGGCCAAGCTGAAGCGCAAGAA...AGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTTGCCGGAACTCAGACTaGACTCCAATCTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTACRNSD*TPICSS
Trigger: GCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGCA...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTCGCAGACACTCAATGTaGAGTACTTGCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATRRHSM*STCCTC
Trigger: ACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCG...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGGCTGGAAGAATTTGTaGATGGTCACTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATGWKNL*MVTGSF
Trigger: GAAGCTCCCAGTGACCATCAACAAATTCTTCCAGCC...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAGGCTGGAAGAATTTGTaGATGGTCACTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPGWKNL*MVTGSF
Trigger: GAAGCTCCCAGTGACCATCAACAAATTCTTCCAGCC...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGTGGGCTGGAAGAATTaGTTGATGGTCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASVGWKN*LMVTGS
Trigger: GCTCCCAGTGACCATCAACAAATTCTTCCAGCCCAC...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGCGCTGGAAAAAGTCTaGGGCCGCCATCTCTGTGGG +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGALEKV*GRHLCG
Trigger: CCCACAGAGATGGCGGCCCAAGACTTTTTCCAGCGC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGGTTGGGATCCACATaGTCCAGAAGAGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAGLGST*SRRAEP
Trigger: TGGCTCTGCTCTTCTGGACAATGTGGATCCCAACCC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGCGGGAGACAGGCTCTTaGCTGGTGCGCAGGGTTAGA +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGRETGS*LVRRVR
Trigger: TCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCG...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACTCCTTGTTGATCCTCTaGATCTCAGCCTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHSLLIL*ISASLL
Trigger: GAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGA...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTTGGCCAGTTCCTTGTaGATCCTCTTGATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASLASSL*ILLISA
Trigger: GGCTGAGATCAAGAGGATCAACAAGGAACTGGCCAA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTGATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: GQRELPGAPTPGSLLSPLMLASS*LILLIS
Trigger: TGAGATCAAGAGGATCAACAAGGAACTGGCCAACAT...CAGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCAAACTTGGAACGGATGTaGGCCAGTTCCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPNLERM*ASSLLI
Trigger: GATCAACAAGGAACTGGCCAACATCCGTTCCAAGTT...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCATCCCAACTTGGAACGGATGTaGGCCAGTTCCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: VATGGPLAVPLHHSCLHPNLERM*ASSLLI
Trigger: GATCAACAAGGAACTGGCCAACATCCGTTCCAAGTT...GGGATGGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCTTGTCCCCTTTGAACTaGGAACGGATGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LLSPLEGPSLSRSTTAASLSPLN*ERMLAS
Trigger: ACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAA...GGAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp AGGCCAGAGGGAGCTCCCAGGCGCCCCCACCCCGGGCTCTTTGCTGTCGCCACTAGGGAGATACAGGTCTaGAAGTCATCCGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: RPEGAPRRPHPGLFAVATREIQV*KSSGFF
Trigger: GAAGAATCCGGATGACTTCAAGACCTGTATCTCCCT...AGTGGCGACAGCAAAGAGCCCGGGGTGGGGGCGCCTGGGAGCTCCCTCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGATAGCGTTCTTGGCGTaGGAGTGCTGCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLIAFLA*ECCTFL
Trigger: CAAGAAGGTGCAGCACTCCAACGCCAAGAACGCTAT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGGCGATGCGGATGAGGTaGAGGATGGTGTCCACGTAC +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGAMRMR*RMVSTY
Trigger: GTACGTGGACACCATCCTCAACCTCATCCGCATCGC...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCGTGGGCTGGAAGAATTaGTTGATGGTCACTGGGAGC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLVGWKN*LMVTGS
Trigger: GCTCCCAGTGACCATCAACAAATTCTTCCAGCCCAC...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 90 bp GGCGGCGTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTTGCTaGACCTGTGCGCCACCGTCCACTTGTGCCGCCACACGCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GGVRKSRRHSMLSTC*TCAPPSTCAATRLV
Trigger: GACCAAGCGTGTGGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGACGCCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 90 bp GGGCCAGCAGCTCACACAAGTGACGGGAGACAGGCTCTTTGCTGGTaGGCAGGGTTAGACGGTACATTTGGGCCTGGGCATTGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: GPAAHTSDGRQALCW*AGLDGTFGPGHWAP
Trigger: TGGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 90 bp GAGGGACTGGGCGGTGCCACCGTACCGGAAGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTTG +
Preference number: 5 (lower is better)
Translates to: EGLGGATVPEAHRQQ*RRQEVSQTLNVEYL
Trigger: CAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGCTTCCGGTACGGTGGCACCGCCCAGTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS CCA 90 bp GCTGGGCCAGCAGCTCACACAAGTGACGGGAGACAGGCTCTTTGCTaGTGCGCAGGGTTAGACGGTACATTTGGGCCTGGGCATTGGGCT +
Preference number: 5 (lower is better)
Translates to: AGPAAHTSDGRQALC*CAGLDGTFGPGHWA
Trigger: AGCCCAATGCCCAGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCTGGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTTGGCCAGTTCCTTGTaGATCCTCTTGATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLLASSL*ILLISA
Trigger: GGCTGAGATCAAGAGGATCAACAAGGAACTGGCCAA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCTTGTCCCCTTTGAACTaGGAACGGATGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCLSPLN*ERMLAS
Trigger: ACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAA...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTTGTCCCCTTTGAACTaGGAACGGATGTTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLLSPLN*ERMLAS
Trigger: ACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGAAGGCCTTGTCCCCTTaGAACTTGGAACGGATGTTG +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLKALSP*NLERML
Trigger: CAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTAAGGCCTTGTCCCCTTaGAACTTGGAACGGATGTTG +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAKALSP*NLERML
Trigger: CAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACTTCTTGATAGCGTTGTaGATGAGCCGGATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PGLFAVATGGPLAVPLHHFLIAL*MSRISS
Trigger: AGAACTGATCCGGCTCATCAACAACGCTATCAAGAA...GTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CCACCCCGGGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCATTCTTGATAGCGTTGTaGATGAGCCGGATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PPRALCCRHWRAPRCPAPFLIAL*MSRISS
Trigger: AGAACTGATCCGGCTCATCAACAACGCTATCAAGAA...TGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCCCGGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTTCTTGCGCTTCAGCTaGGCCAAGATGGACGACTCC +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGFLRFS*AKMDDS
Trigger: GGAGTCGTCCATCTTGGCCAAGCTGAAGCGCAAGAA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCCGCAGACACTCAATGTaGAGTACTTGCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLRRHSM*STCCTC
Trigger: ACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCG...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGGCTGGAAGAATTTGTaGATGGTCACTGGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAGWKNL*MVTGSF
Trigger: GAAGCTCCCAGTGACCATCAACAAATTCTTCCAGCC...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCATCGGGTGGTTGGCTTaGAAGATTTTCTGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLIGWLA*KIFCAS
Trigger: GGAGGCACAGAAAATCTTCAAAGCCAACCACCCGAT...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 90 bp AGTGGCGGCGTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTTaGTGCACCTGTGCGCCACCGTCCACTTGTGCCGCCACACGCTTG +
Preference number: 5 (lower is better)
Translates to: SGGVRKSRRHSMLST*CTCAPPSTCAATRL
Trigger: CAAGCGTGTGGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGACGCCGCCACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 90 bp ACTGCTGGGCCAGCAGCTCACACAAGTGACGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGACGGTACATTTGGGCCTGGGCATTGG +
Preference number: 5 (lower is better)
Translates to: TAGPAAHTSDGRQAL*WCAGLDGTFGPGHW
Trigger: CCAATGCCCAGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCTGGCCCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 90 bp TGGAAGAATTTGTTGATGGTCACTGGGAGCTTCAGAGTGAGGGACTaGGCGGTGCCACCGTACCGGAAGCGCACCGACAACAGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: WKNLLMVTGSFRVRD*AVPPYRKRTDNSGG
Trigger: GCCGCCACTGTTGTCGGTGCGCTTCCGGTACGGTGGCACCGCCCAGTCCCTCACTCTGAAGCTCCCAGTGACCATCAACAAATTCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS-3UTR CAA 90 bp TTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCCTCTCCTTGTTGATCCTCTaGATCTCAGCCTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: FAVATGGPLAVPLHHSCLSLLIL*ISASLL
Trigger: GAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGA...GAGGCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGTCCTTGTTGATCCTCTaGATCTCAGCCTCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLSLLIL*ISASLL
Trigger: GAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGA...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GGCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTAGGGAGATACAGGTCTaGAAGTCATCCGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: GSLLSPLEGPSLSRSTTAREIQV*KSSGFF
Trigger: GAAGAATCCGGATGACTTCAAGACCTGTATCTCCCT...AGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp GCTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGAGGGAGATACAGGTCTaGAAGTCATCCGGATTCTTC +
Preference number: 5 (lower is better)
Translates to: ALCCRHWRAPRCPAPPQLREIQV*KSSGFF
Trigger: GAAGAATCCGGATGACTTCAAGACCTGTATCTCCCT...CAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 90 bp GGACAGCCAGGGATACACAGAGAAACCAGTTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCATGCCATCGCCTTTGGATACAGCCG +
Preference number: 5 (lower is better)
Translates to: GQPGIHRETSSGCRR*TRRAHACHRLWIQP
Trigger: CGGCTGTATCCAAAGGCGATGGCATGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGAACTGGTTTCTCTGTGTATCCCTGGCTGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS GCA 90 bp CAGTCTCCAGGTACCGCAGCATCTCTGACACAATCTGCTTGGCATTaGTCCGGTCACACATGGCATACAGGAGATCAGCCGCCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: QSPGTAASLTQSAWH*SGHTWHTGDQPPAA
Trigger: GGCAGCGGGCGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACCTGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp CTCTTTGCTGTCGCCACTGGAGGGCCCCTCGCTGTCCCGCTCCACCACAGCTGCATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: LFAVATGGPLAVPLHHSCMLASS*LILLIS
Trigger: TGAGATCAAGAGGATCAACAAGGAACTGGCCAACAT...GCAGCTGTGGTGGAGCGGGACAGCGAGGGGCCCTCCAGTGGCGACAGCAAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGCGCAGACACTCAATGTaGAGTACTTGCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGRRHSM*STCCTC
Trigger: ACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCG...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 90 bp GCTCCAGCCGAAGCAGACACCCCACCTGCAGGGCCTTCGTCTGGATaGTTCCAGCACCCACAAAGTTCTCAGGGTTGGGATCCACATTGT +
Preference number: 5 (lower is better)
Translates to: APAEADTPPAGPSSG*FQHPQSSQGWDPHC
Trigger: ACAATGTGGATCCCAACCCTGAGAACTTTGTGGGTGCTGGAATCATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCTTCGGCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 90 bp GGACCACGGTGGGCAAGAAGTTCTGGAACTGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGCGGCCTGCAGCGGGTGGGTGAGGGC +
Preference number: 5 (lower is better)
Translates to: GPRWARSSGTAQKSC*HRRDTCGLQRVGEG
Trigger: GCCCTCACCCACCCGCTGCAGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCACCGTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208472.2
CDS-3UTR CAA 90 bp TGCCTCCATCCCAGGGCTGCCTGGCACTGGCCATATACCAGGGCAAGTCCAGGGTTCTTGATAGCGTTGTaGATGAGCCGGATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: CLHPRAAWHWPYTRASPGFLIAL*MSRISS
Trigger: AGAACTGATCCGGCTCATCAACAACGCTATCAAGAA...CCCTGGACTTGCCCTGGTATATGGCCAGTGCCAGGCAGCCCTGGGATGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 90 bp AGTTCTGGAACTGCACAGAAGTCTTGTTGCCATAGAAGAGATACATaGGGCCTGCAGCGGGTGGGTGAGGGCTCCATCCAAGCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSGTAQKSCCHRRDT*GLQRVGEGSIQAPL
Trigger: CAGAGGAGCTTGGATGGAGCCCTCACCCACCCGCTGCAGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGTTCCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208472.2
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGGCCCCAGGGCCCTTCTaGCGCTTCAGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREAPGPF*RFSLAK
Trigger: CTTGGCCAAGCTGAAGCGCAAGAAGGGCCCTGGGGC...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 90 bp CTCTCGGATGGCATAGTCAGCAGTCTCCAGGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATTGCTCCGGTCACACATGGCATACAG +
Preference number: 5 (lower is better)
Translates to: LSDGIVSSLQVPQHL*HNLLGIAPVTHGIQ
Trigger: CTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACCTGGAGACTGCTGACTATGCCATCCGAGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 90 bp GGACCACGGTGGGCAAGAAGTTCTGGAACTGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGCGGCCCAGGTTCTGCCGGAACTCAG +
Preference number: 5 (lower is better)
Translates to: GPRWARSSGTAQKSC*HRRDTCGPGSAGTQ
Trigger: CTGAGTTCCGGCAGAACCTGGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCACCGTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTGGACGTCATCACGGTaGGTGACGATCTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREWTSSR*VTICST
Trigger: CGTGCTGCAGATCGTCACCAACCGTGATGACGTCCA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 90 bp CCCACTATTCTTACACACGAACTTATTCAACAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTCCTCAGGACCTGGGTCAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PTILTHELIQQFICF*NGRAYVLRTWVSSW
Trigger: CCAGCTGCTGACCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAGAATAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS CCA 90 bp CCCACTATTCTTACACACGAACTTATTCAACAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTCCTCAGGACCTGGGCTGAGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PTILTHELIQQFICF*NGRAYVLRTWAEEG
Trigger: GCCTTCCTCAGCCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAGAATAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 90 bp CAAGACCCCACTATTCTTACACACGAACTTATTCAACAGTTCATCTaGTTCTGGAATGGGAGGGCCTATGTCCTCAGGACCTGGGTCAGC +
Preference number: 5 (lower is better)
Translates to: QDPTILTHELIQQFI*FWNGRAYVLRTWVS
Trigger: GCTGACCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAGAATAGTGGGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS GCA 90 bp CAAGACCCCACTATTCTTACACACGAACTTATTCAACAGTTCATCTaGTTCTGGAATGGGAGGGCCTATGTCCTCAGGACCTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QDPTILTHELIQQFI*FWNGRAYVLRTWAE
Trigger: CTCAGCCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAGAATAGTGGGGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS CCA 90 bp TATTCTTACACACGAACTTATTCAACAGTTCATCTGCTTCTGGAATaGGAGGGCCTATGTCCTCAGGACCTGGGTCAGCAGCTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: YSYTRTYSTVHLLLE*EGLCPQDLGQQLEL
Trigger: CAGCTCCAGCTGCTGACCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTCTGACACAATCTGCTaGGCATTGCTCCGGTCACAC +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGERESDTIC*ALLRSH
Trigger: GTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 90 bp CCCAGGTTCTGCCGGAACTCAGACTTGACTCCAATCTGCAGCAGCTaGTTCTCAAACAAGACCCCACTATTCTTACACACGAACTTATTC +
Preference number: 5 (lower is better)
Translates to: PRFCRNSDLTPICSS*FSNKTPLFLHTNLF
Trigger: GAATAAGTTCGTGTGTAAGAATAGTGGGGTCTTGTTTGAGAACCAGCTGCTGCAGATTGGAGTCAAGTCTGAGTTCCGGCAGAACCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGCGCAGACACTCAATGTaGAGTACTTGCTGCACCTGT +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGERERRHSM*STCCTC
Trigger: ACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCG...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGAACTTGGAACGGATGTaGGCCAGTTCCTTGTTGATC +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGERENLERM*ASSLLI
Trigger: GATCAACAAGGAACTGGCCAACATCCGTTCCAAGTT...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCA +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREMLASS*LILLIS
Trigger: TGAGATCAAGAGGATCAACAAGGAACTGGCCAACAT...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS-3UTR CAA 90 bp TCTCTCTGTTTATTCGCTCACAATAATACACAGCCCCTGGATGGGGAAAGGGAGTTCTTGATAGCGTTGTaGATGAGCCGGATCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SLCLFAHNNTQPLDGEREFLIAL*MSRISS
Trigger: AGAACTGATCCGGCTCATCAACAACGCTATCAAGAA...CTCCCTTTCCCCATCCAGGGGCTGTGTATTATTGTGAGCGAATAAACAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 72 bp ACTTGTGCCGCCACACGCTTGGTCTGCACCGCCAGCTaGGTCTGGAGGTCCCCAGGATGGACCACGGTGGGC +
Preference number: 6 (lower is better)
Translates to: TCAATRLVCTAS*VWRSPGWTTVG
Trigger: GCCCACCGTGGTCCATCCTGGGGACCTCCAGACTCAGCTGGCGGTGCAGACCAAGCGTGTGGCGGCACAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS CCA 72 bp TGCTGCTGGTGTCCCTGCGGCTGTCATCTAGGGCACTaGCTGCCCCAGGGCCCTTCTTGCGCTTCAGCTTGG +
Preference number: 6 (lower is better)
Translates to: CCWCPCGCHLGH*LPQGPSCASAW
Trigger: CCAAGCTGAAGCGCAAGAAGGGCCCTGGGGCAGCCAGTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp TGCGCAGGGTTAGACGGTACATTTGGGCCTGGGCATTaGGCTCCAGCCGAAGCAGACACCCCACCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: CAGLDGTFGPGH*APAEADTPPAG
Trigger: CCCTGCAGGTGGGGTGTCTGCTTCGGCTGGAGCCCAATGCCCAGGCCCAAATGTACCGTCTAACCCTGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CAA 90 bp GTCGACACAGTGCTGGGGGTGGGCTCCACACCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGGCTGTCATCTAGGGCACTGGCTGCC +
Preference number: 6 (lower is better)
Translates to: VDTVLGVGSTPPLMS*LLVSLRLSSRALAA
Trigger: GGCAGCCAGTGCCCTAGATGACAGCCGCAGGGACACCAGCAGCAATGACATCAATGGGGGTGTGGAGCCCACCCCCAGCACTGTGTCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp GGCGGTGCCACCGTACCGGAAGCGCACCGACAACAGTaGCGGCGTCAGGAAGTCTCGCAGACACTCAATGTT +
Preference number: 6 (lower is better)
Translates to: GGATVPEAHRQQ*RRQEVSQTLNV
Trigger: AACATTGAGTGTCTGCGAGACTTCCTGACGCCGCCACTGTTGTCGGTGCGCTTCCGGTACGGTGGCACCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS CAA 72 bp GTGCTGGGGGTGGGCTCCACACCCCCATTGATGTCATaGCTGCTGGTGTCCCTGCGGCTGTCATCTAGGGCA +
Preference number: 6 (lower is better)
Translates to: VLGVGSTPPLMS*LLVSLRLSSRA
Trigger: TGCCCTAGATGACAGCCGCAGGGACACCAGCAGCAATGACATCAATGGGGGTGTGGAGCCCACCCCCAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CAA 72 bp GTCGACACAGTGCTGGGGGTGGGCTCCACACCCCCATaGATGTCATTGCTGCTGGTGTCCCTGCGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: VDTVLGVGSTPP*MSLLLVSLRLS
Trigger: TGACAGCCGCAGGGACACCAGCAGCAATGACATCAATGGGGGTGTGGAGCCCACCCCCAGCACTGTGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 72 bp TCGACACAGTGCTGGGGGTGGGCTCCACACCCCCATTaGTGTCATTGCTGCTGGTGTCCCTGCGGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: STQCWGWAPHPH*CHCCWCPCGCH
Trigger: ATGACAGCCGCAGGGACACCAGCAGCAATGACATCAATGGGGGTGTGGAGCCCACCCCCAGCACTGTGTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp TTGTTGATGGTCACTGGGAGCTTCAGAGTGAGGGACTaGGCGGTGCCACCGTACCGGAAGCGCACCGACAAC +
Preference number: 6 (lower is better)
Translates to: LLMVTGSFRVRD*AVPPYRKRTDN
Trigger: GTTGTCGGTGCGCTTCCGGTACGGTGGCACCGCCCAGTCCCTCACTCTGAAGCTCCCAGTGACCATCAACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS CAA 90 bp CAGTGGCGGCGTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTaGCTGCACCTGTGCGCCACCGTCCACTTGTGCCGCCACACGCTT +
Preference number: 6 (lower is better)
Translates to: QWRRQEVSQTLNVEY*LHLCATVHLCRHTL
Trigger: AAGCGTGTGGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGACGCCGCCACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS TCA 72 bp CAGCCTCTTTGCTCTTGCAGTTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCATGCCATCGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: QPLCSCSSGCRR*TRRAHACHRLW
Trigger: CCAAAGGCGATGGCATGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGAACTGCAAGAGCAAAGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp GTAGCCACCGACCTTCACCATGTTCTCATGACAGGCTaGGGCCTGGAGGGCCTCAAACACTGTCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: VATDLHHVLMTG*GLEGLKHCLGS
Trigger: GCTGCCAAGACAGTGTTTGAGGCCCTCCAGGCCCCAGCCTGTCATGAGAACATGGTGAAGGTCGGTGGCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp GCAGCTCACACAAGTGACGGGAGACAGGCTCTTTGCTaGTGCGCAGGGTTAGACGGTACATTTGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: AAHTSDGRQALC*CAGLDGTFGPG
Trigger: CCCAGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS TCA 72 bp GGGATACACAGAGAAACCAGTTCCGGATGTCGGAGATaGACACGGCGAGCCCACGCATGCCATCGCCTTTGG +
Preference number: 6 (lower is better)
Translates to: GIHRETSSGCRR*TRRAHACHRLW
Trigger: CCAAAGGCGATGGCATGCGTGGGCTCGCCGTGTTCATCTCCGACATCCGGAACTGGTTTCTCTGTGTATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208405.2
CDS TCA 72 bp GCTGGGTGTCACTGGGAAAGCCCATGTGCTGATCATTaGGCAAGTGCACTACACGTGCCGTCCACTCGCCCA +
Preference number: 6 (lower is better)
Translates to: AGCHWESPCADH*ASALHVPSTRP
Trigger: TGGGCGAGTGGACGGCACGTGTAGTGCACTTGCTCAATGATCAGCACATGGGCTTTCCCAGTGACACCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000207814.2
CDS GCA 72 bp GTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTTaGTGCACCTGTGCGCCACCGTCCACTTGTGCCGCC +
Preference number: 6 (lower is better)
Translates to: VRKSRRHSMLST*CTCAPPSTCAA
Trigger: GGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 72 bp GCTCACACAAGTGACGGGAGACAGGCTCTTTGCTGGTaGGCAGGGTTAGACGGTACATTTGGGCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: AHTSDGRQALCW*AGLDGTFGPGH
Trigger: ATGCCCAGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 72 bp CCAGCAGCTCACACAAGTGACGGGAGACAGGCTCTTTaGTGGTGCGCAGGGTTAGACGGTACATTTGGGCCT +
Preference number: 6 (lower is better)
Translates to: PAAHTSDGRQAL*WCAGLDGTFGP
Trigger: AGGCCCAAATGTACCGTCTAACCCTGCGCACCAGCAAAGAGCCTGTCTCCCGTCACTTGTGTGAGCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp CCAGGATGGCCACCTTCAGCACGATCTCCTCTCGGATaGCATAGTCAGCAGTCTCCAGGTACCGCAGCATCT +
Preference number: 6 (lower is better)
Translates to: PGWPPSARSPLG*HSQQSPGTAAS
Trigger: AGATGCTGCGGTACCTGGAGACTGCTGACTATGCCATCCGAGAGGAGATCGTGCTGAAGGTGGCCATCCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CAA 72 bp CGTCAGGAAGTCTCGCAGACACTCAATGTTGAGTACTaGCTGCACCTGTGCGCCACCGTCCACTTGTGCCGC +
Preference number: 6 (lower is better)
Translates to: RQEVSQTLNVEY*LHLCATVHLCR
Trigger: GCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCTGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS TCA 72 bp GAAGCAGACACCCCACCTGCAGGGCCTTCGTCTGGATaGTTCCAGCACCCACAAAGTTCTCAGGGTTGGGAT +
Preference number: 6 (lower is better)
Translates to: EADTPPAGPSSG*FQHPQSSQGWD
Trigger: ATCCCAACCCTGAGAACTTTGTGGGTGCTGGAATCATCCAGACGAAGGCCCTGCAGGTGGGGTGTCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 72 bp AGGAAGTCTCGCAGACACTCAATGTTGAGTACTTGCTaGACCTGTGCGCCACCGTCCACTTGTGCCGCCACA +
Preference number: 6 (lower is better)
Translates to: RKSRRHSMLSTC*TCAPPSTCAAT
Trigger: TGTGGCGGCACAAGTGGACGGTGGCGCACAGGTGCAGCAAGTACTCAACATTGAGTGTCTGCGAGACTTCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 72 bp GGTACCGCAGCATCTCTGACACAATCTGCTTGGCATTaGTCCGGTCACACATGGCATACAGGAGATCAGCCG +
Preference number: 6 (lower is better)
Translates to: GTAASLTQSAWH*SGHTWHTGDQP
Trigger: CGGCTGATCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 72 bp GCAGTCTCCAGGTACCGCAGCATCTCTGACACAATCTaGTTGGCATTGCTCCGGTCACACATGGCATACAGG +
Preference number: 6 (lower is better)
Translates to: AVSRYRSISDTI*LALLRSHMAYR
Trigger: CCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACCTGGAGACTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 72 bp ACTGCACAGAAGTCTTGTTGCCATAGAAGAGATACATaGGGCCTGCAGCGGGTGGGTGAGGGCTCCATCCAA +
Preference number: 6 (lower is better)
Translates to: TAQKSCCHRRDT*GLQRVGEGSIQ
Trigger: TTGGATGGAGCCCTCACCCACCCGCTGCAGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208472.2
CDS TCA 72 bp GGCATAGTCAGCAGTCTCCAGGTACCGCAGCATCTCTaGCACAATCTGCTTGGCATTGCTCCGGTCACACAT +
Preference number: 6 (lower is better)
Translates to: GIVSSLQVPQHL*HNLLGIAPVTH
Trigger: ATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACCTGGAGACTGCTGACTATGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CAA 72 bp GTCTCCAGGTACCGCAGCATCTCTGACACAATCTGCTaGGCATTGCTCCGGTCACACATGGCATACAGGAGA +
Preference number: 6 (lower is better)
Translates to: VSRYRSISDTIC*ALLRSHMAYRR
Trigger: TCTCCTGTATGCCATGTGTGACCGGAGCAATGCCAAGCAGATTGTGTCAGAGATGCTGCGGTACCTGGAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CAA 72 bp CCAGCACCCACAAAGTTCTCAGGGTTGGGATCCACATaGTCCAGAAGAGCAGAGCCAAACCCCAGAAGCTTG +
Preference number: 6 (lower is better)
Translates to: PAPTKFSGLGST*SRRAEPNPRSL
Trigger: CAAGCTTCTGGGGTTTGGCTCTGCTCTTCTGGACAATGTGGATCCCAACCCTGAGAACTTTGTGGGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS GCA 72 bp TGGGCAAGAAGTTCTGGAACTGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGCGGCCTGCAGCGGGTG +
Preference number: 6 (lower is better)
Translates to: WARSSGTAQKSC*HRRDTCGLQRV
Trigger: CACCCGCTGCAGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208472.2
CDS CAA 90 bp AAGGCCTTGTCCCCTTTGAACTTGGAACGGATGTTGGCCAGTTCCTaGTTGATCCTCTTGATCTCAGCCTCTTTGCTCTTGCAGTTCCGG +
Preference number: 6 (lower is better)
Translates to: KALSPLNLERMLASS*LILLISASLLLQFR
Trigger: CCGGAACTGCAAGAGCAAAGAGGCTGAGATCAAGAGGATCAACAAGGAACTGGCCAACATCCGTTCCAAGTTCAAAGGGGACAAGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS GCA 72 bp TGGGCAAGAAGTTCTGGAACTGCACAGAAGTCTTGTTaGCATAGAAGAGATACATGCGGCCCAGGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: WARSSGTAQKSC*HRRDTCGPGSA
Trigger: GGCAGAACCTGGGCCGCATGTATCTCTTCTATGGCAACAAGACTTCTGTGCAGTTCCAGAACTTCTTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8
CDS CCA 72 bp ACACGAACTTATTCAACAGTTCATCTGCTTCTGGAATaGGAGGGCCTATGTCCTCAGGACCTGGGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: TRTYSTVHLLLE*EGLCPQDLGQQ
Trigger: CTGCTGACCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS CCA 72 bp CTTACACACGAACTTATTCAACAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTCCTCAGGACCTGGGTC +
Preference number: 6 (lower is better)
Translates to: LTHELIQQFICF*NGRAYVLRTWV
Trigger: GACCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085399.13
ENSMUST00000166972.9
CDS CCA 72 bp CTTACACACGAACTTATTCAACAGTTCATCTGCTTCTaGAATGGGAGGGCCTATGTCCTCAGGACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: LTHELIQQFICF*NGRAYVLRTWA
Trigger: AGCCCAGGTCCTGAGGACATAGGCCCTCCCATTCCAGAAGCAGATGAACTGTTGAATAAGTTCGTGTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000107857.11
ENSMUST00000167930.8
ENSMUST00000208472.2
CDS TCA 72 bp GGATCAGTTCTGAGTTCGAGTTCACCAGGACTGAGATaGACAGGTACCCTATCTGCTTCTCCGTGTACTTGT +
Preference number: 6 (lower is better)
Translates to: GSVLSSSSPGLR*TGTLSASPCTC
Trigger: ACAAGTACACGGAGAAGCAGATAGGGTACCTGTTCATCTCAGTCCTGGTGAACTCGAACTCAGAACTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085399.13
ENSMUST00000107857.11
ENSMUST00000166972.9
ENSMUST00000167930.8