Pregenerated sensors for AP1M2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003309Ensembl transcript IDs: ENSMUST00000003397.9, ENSMUST00000115433.11, ENSMUST00000213250.2, ENSMUST00000213762.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTaGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: QKKLEMEMLCMSEIS*KQRLHCSWTSLKAA Trigger: GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR GCA 90 bp | GAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTaGTCATGGACAAGCCTGAAAGCAGCCTGGACTACAAGAGACCTT | + |
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Preference number: 1 (lower is better) Translates to: EMLCMSEISWKQRLH*SWTSLKAAWTTRDL Trigger: AAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR CCA 90 bp | CTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATaGACAAGCCTGAAAGCAGCCTGGACTACAAGAGACCTTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: LCMSEISWKQRLHCS*TSLKAAWTTRDLVS Trigger: TGAGACAAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR GCA 90 bp | TATTTAAAATCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATaGTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCT | + |
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Preference number: 1 (lower is better) Translates to: YLKSFPEVRRSWRWR*CACQKSLGSKGFIA Trigger: AGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGATTTTAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCGGTCATGGGCCTCATaGCTGTCATCACCACATGTG | + |
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Preference number: 2 (lower is better) Translates to: GSKVDRGGVVVCTTYLGLRSWAS*LSSPHV Trigger: CACATGTGGTGATGACAGTCATGAGGCCCATGACCG...CAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGCCCAAGGCAGTTTACTaGAAGAAGGCACTCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSTHTRGLTAACDCGSRRPKAVY*KKALMG Trigger: CCCCATGAGTGCCTTCTTGCAGTAAACTGCCTTGGG...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTTGGTATCTGGGGAGATaGAAGCCCCACTTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GQQGGQGWCGGVHNIPGPWYLGR*KPHFFS Trigger: GGAGAAGAAGTGGGGCTTCCATCTCCCCAGATACCA...AGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGAGCCTGAAAGCAGCCTaGACTACAAGAGACCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: PSTHTRGLTAACDCGSRRSLKAA*TTRDLV Trigger: GACAAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCT...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGACCCACATGGACCTATaGACACCCACATACAGATAC | + |
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Preference number: 2 (lower is better) Translates to: PSTHTRGLTAACDCGSRRTHMDL*TPTYRY Trigger: GTATCTGTATGTGGGTGTGCATAGGTCCATGTGGGT...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | TGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCAGTAATTTTGCTCACAGCTGCCTGTaGCTGCGGCTCCAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: WTGVVWWCAQHTWACSNFAHSCL*LRLQKD Trigger: ATCCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGC...AAAATTACTGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGGTCGTTGTCAAAGCGTaGAAGCCTCACACATTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VISGGSHTCAGHSQPLPKVVVKA*KPHTLV Trigger: CACCAATGTGTGAGGCTTTCACGCTTTGACAACGAC...CTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGAATGGTATCTGGGGAGATaGAAGCCCCACTTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: NQWGLPHMRWSFPAPTQEWYLGR*KPHFFS Trigger: GGAGAAGAAGTGGGGCTTCCATCTCCCCAGATACCA...TTCTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGGAATTTCTCAATGACTaGCTCGATCCAGATCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: VISGGSHTCAGHSQPLPKEFLND*LDPDQG Trigger: CCCCTGATCTGGATCGAGTCAGTCATTGAGAAATTC...CTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGCAGCTCTTAAAAGTCTaGAGCTGGTATCTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VISGGSHTCAGHSQPLPKQLLKV*SWYLGR Trigger: TCTCCCCAGATACCAGCTGCAGACTTTTAAGAGCTG...CTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGATCTCCACTCGGCTGTaGGAGAATTTCTCAATGACT | + |
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Preference number: 2 (lower is better) Translates to: GSKVDRGGVVVCTTYLGLISTRL*ENFSMT Trigger: AGTCATTGAGAAATTCTCGCACAGCCGAGTGGAGAT...CAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGTCTGCAGCTGGTATCTaGGGAGATGGAAGCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWSAAGI*GDGSPT Trigger: AGTGGGGCTTCCATCTCCCCAGATACCAGCTGCAGA...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGCATAAAATAGGCACTTaGTGCATATACAAAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PSTHTRGLTAACDCGSRRHKIGT*CIYKGP Trigger: TGGCCCTTTGTATATGCAGCAAGTGCCTATTTTATG...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTTGTCATCACCACATGTaGGAGGCAGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGCHHHM*EAEAGG Trigger: TCCTCCTGCCTCTGCCTCCCACATGTGGTGATGACA...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | TGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCAGTAATTTTTGTCATCACCACATGTaGGAGGCAGAGGCAGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: WTGVVWWCAQHTWACSNFCHHHM*EAEAGG Trigger: TCCTCCTGCCTCTGCCTCCCACATGTGGTGATGACA...AAAATTACTGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAAACAGGAGAAAACAACCGGTCATGGGCCTCATGACTGTCATCACCACCTTGACCCCGATGGGTaGTCGGCCCTCTACCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KAKQEKTTGHGPHDCHHHLDPDG*SALYLL Trigger: GAGGAGGTAGAGGGCCGACCACCCATCGGGGTCAAG...GTGGTGATGACAGTCATGAGGCCCATGACCGGTTGTTTTCTCCTGTTTTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTCCCAAGGCAGTTTACTaGAAGAAGGCACTCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: FNDTLKPRWRTSGLGSAAPKAVY*KKALMG Trigger: CCCCATGAGTGCCTTCTTGCAGTAAACTGCCTTGGG...AGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAAACAGGAGAAAACAACCGGTCATGGGCCTCATGACTGTCATCACCACCTCCCACACATGCGCTaGTCATTCCCAGCCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: KAKQEKTTGHGPHDCHHHLPHMR*SFPAPT Trigger: GGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAG...GTGGTGATGACAGTCATGAGGCCCATGACCGGTTGTTTTCTCCTGTTTTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGAGAAACGGTAAAGTATaGAATCTCAAACTTGACCCC | + |
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Preference number: 2 (lower is better) Translates to: GSKVDRGGVVVCTTYLGLRNGKV*NLKLDP Trigger: GGGGTCAAGTTTGAGATTCCATACTTTACCGTTTCT...CAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCGGCTCCAGAAGGATCTaGAGCCTCTGCAGACACCCA | + |
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Preference number: 2 (lower is better) Translates to: EISWKQRLHCSWTSLKAAGSRRI*SLCRHP Trigger: TGGGTGTCTGCAGAGGCTTCAGATCCTTCTGGAGCC...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAGCTCACAGCTGCCTGTaGCTGCGGCTCCAGAAGGAT | + |
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Preference number: 2 (lower is better) Translates to: SEEAGDGDAVHVRNLLEAAHSCL*LRLQKD Trigger: ATCCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGC...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAAACAGGAGAAAACAACCGGTCATGGGCCTCATGACTGTCATCACCACCAGATGGAGGACCAGTaGCCTCGGCTCAGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: KAKQEKTTGHGPHDCHHHQMEDQ*PRLSSY Trigger: ATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTG...GTGGTGATGACAGTCATGAGGCCCATGACCGGTTGTTTTCTCCTGTTTTGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGAGGAACGCTGGAAGTCAGAGTATGGCCAGCCCTATCTTCAAAAATGAACTTTCCCCCAGGGAATaGCTTGATGCTCCAGATGAC | + |
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Preference number: 2 (lower is better) Translates to: GRRNAGSQSMASPIFKNELSPRE*LDAPDD Trigger: GTCATCTGGAGCATCAAGTCATTCCCTGGGGGAAAG...TTCATTTTTGAAGATAGGGCTGGCCATACTCTGACTTCCAGCGTTCCTCCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTCAGCTCTTAAAAGTCTaGAGCTGGTATCTGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGQLLKV*SWYLGR Trigger: TCTCCCCAGATACCAGCTGCAGACTTTTAAGAGCTG...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCTATAAAAGGTGGGCCCTAGATCTGCCCAAGGCAGTTTACTGCAAGAAGTGGTATCTGGGGAGATaGAAGCCCCACTTCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SSYKRWALDLPKAVYCKKWYLGR*KPHFFS Trigger: GGAGAAGAAGTGGGGCTTCCATCTCCCCAGATACCA...CTTCTTGCAGTAAACTGCCTTGGGCAGATCTAGGGCCCACCTTTTATAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCTCTGCAGCTGGTATCTaGGGAGATGGAAGCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: EISWKQRLHCSWTSLKAASAAGI*GDGSPT Trigger: AGTGGGGCTTCCATCTCCCCAGATACCAGCTGCAGA...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAACCCTAAAACCCAGATaGAGGACCAGTGGCCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: SEEAGDGDAVHVRNLLEATLKPR*RTSGLG Trigger: GCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAACTCCCACACATGCGCTaGTCATTCCCAGCCCCTACC | + |
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Preference number: 2 (lower is better) Translates to: SFPEVRRSWRWRCCACQKLPHMR*SFPAPT Trigger: GGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAG...TTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAAACAGGAGAAAACAACCGGTCATGGGCCTCATGACTGTCATCACCACGTACAGCAACTGCCGTaGCTACAGAGGGTGTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: KAKQEKTTGHGPHDCHHHVQQLP*LQRVSD Trigger: GTCTGACACCCTCTGTAGCCACGGCAGTTGCTGTAC...GTGGTGATGACAGTCATGAGGCCCATGACCGGTTGTTTTCTCCTGTTTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR CAA 90 bp | AATGACTTGATGCTCCAGATGACAACATTCTTCTCAGGCACATACTaGGCACTGCCCACACTGGTCTTGAAGCGCGGAGAGTCTGCATCA | + |
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Preference number: 2 (lower is better) Translates to: NDLMLQMTTFFSGTY*ALPTLVLKRGESAS Trigger: TGATGCAGACTCTCCGCGCTTCAAGACCAGTGTGGGCAGTGCCAAGTATGTGCCTGAGAAGAATGTTGTCATCTGGAGCATCAAGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAACAGATGGAGGACCAGTaGCCTCGGCTCAGCAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: SFPEVRRSWRWRCCACQKQMEDQ*PRLSSY Trigger: ATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTG...TTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGAACCCTAAAACCCAGATaGAGGACCAGTGGCCTCGGC | + |
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Preference number: 2 (lower is better) Translates to: RCCACQKSLGSKGFIAHGTLKPR*RTSGLG Trigger: GCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT...TCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGTACAGCAACTGCCGTaGCTACAGAGGGTGTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: PEVRRSWRWRCCACQKSLVQQLP*LQRVSD Trigger: GTCTGACACCCTCTGTAGCCACGGCAGTTGCTGTAC...AAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAACCTCAGTTTCCACGCTaGGGAGGCCAAAGTGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: MSEISWKQRLHCSWTSLKPQFPR*GGQSGH Trigger: GTGCCCACTTTGGCCTCCCCAGCGTGGAAACTGAGG...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR CAA 90 bp | GGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATaGCTCATGGACAAGCCTGAAAGCAGCCTGGACTACAAGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: GDAVHVRNLLEAKAS*LMDKPESSLDYKRP Trigger: AGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | AATAGGCACTTGCTGCATATACAAAGGGCCAGAGGTTCGAAAGTAAAAAGTACGGGCTCCAGAAGGATCTaGAGCCTCTGCAGACACCCA | + |
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Preference number: 2 (lower is better) Translates to: NRHLLHIQRARGSKVKSTGSRRI*SLCRHP Trigger: TGGGTGTCTGCAGAGGCTTCAGATCCTTCTGGAGCC...CGTACTTTTTACTTTCGAACCTCTGGCCCTTTGTATATGCAGCAAGTGCCTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAATGGAATCTCAAACTTaGCCCCGATGGGTGGTCGGC | + |
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Preference number: 2 (lower is better) Translates to: HVRNLLEAKASLLMDKPEMESQT*PRWVVG Trigger: GCCGACCACCCATCGGGGTCAAGTTTGAGATTCCAT...TTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAACAGGGGTGGTGTGGTaGTGTGCACAACATACCTGG | + |
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Preference number: 2 (lower is better) Translates to: KSEEAGDGDAVHVRNLLETGVVW*CAQHTW Trigger: CCAGGTATGTTGTGCACACCACCACACCACCCCTGT...TTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAATGGACAGGGGTGGTGTaGTGGTGTGCACAACATACC | + |
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Preference number: 2 (lower is better) Translates to: KSEEAGDGDAVHVRNLLEWTGVV*WCAQHT Trigger: GGTATGTTGTGCACACCACCACACCACCCCTGTCCA...TTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCTCTCAGGCACATACTTaGCACTGCCCACACTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VRNLLEAKASLLMDKPESSQAHT*HCPHWS Trigger: AGACCAGTGTGGGCAGTGCCAAGTATGTGCCTGAGA...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR CAA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTaGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SEEAGDGDAVHVRNL*EAKASLLMDKPESS Trigger: GCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCAAAACAGGAGAAAACAACCGGTCATGGGCCTCATGACTGTCATCACCACCAGCTCTTAAAAGTCTaGAGCTGGTATCTGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KAKQEKTTGHGPHDCHHHQLLKV*SWYLGR Trigger: TCTCCCCAGATACCAGCTGCAGACTTTTAAGAGCTG...GTGGTGATGACAGTCATGAGGCCCATGACCGGTTGTTTTCTCCTGTTTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTCATATAAAATTAGGGTaGGACACAAAGAAACCACCC | + |
|
Preference number: 2 (lower is better) Translates to: FNDTLKPRWRTSGLGSAAHIKLG*DTKKPP Trigger: GGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATG...AGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCGAAGTCAGAAGAAGCTaGAGATGGAGATGCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EISWKQRLHCSWTSLKAAEVRRS*RWRCCA Trigger: TGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTC...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCGAGATGGAGATGCTGTaGATGTCAGAAATCTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: EISWKQRLHCSWTSLKAAEMEML*MSEISW Trigger: CCAAGAGATTTCTGACATGCACAGCATCTCCATCTC...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAGAAGTCAGAAGAAGCTaGAGATGGAGATGCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SEEAGDGDAVHVRNLLEAEVRRS*RWRCCA Trigger: TGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTC...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAACCCACATGGACCTATaGACACCCACATACAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: MSEISWKQRLHCSWTSLKTHMDL*TPTYRY Trigger: GTATCTGTATGTGGGTGTGCATAGGTCCATGTGGGT...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAACTGGAAGTCAGAGTATaGCCAGCCCTATCTTCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HVRNLLEAKASLLMDKPELEVRV*PALSSK Trigger: TTTTGAAGATAGGGCTGGCCATACTCTGACTTCCAG...TTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCCTTCTCCCTTCTAGCTaGTACGAAGTTGATAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: VRNLLEAKASLLMDKPESLLPSS*YEVDNH Trigger: GTGATTATCAACTTCGTACCAGCTAGAAGGGAGAAG...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCCATATAAAATTAGGGTaGGACACAAAGAAACCACCC | + |
|
Preference number: 2 (lower is better) Translates to: VRNLLEAKASLLMDKPESHIKLG*DTKKPP Trigger: GGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATG...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCCATATAAAATTAGGGTaGGACACAAAGAAACCACCC | + |
|
Preference number: 2 (lower is better) Translates to: DGDAVHVRNLLEAKASLLHIKLG*DTKKPP Trigger: GGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATG...GAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAAAAATAGGCACTTGCTaGATATACAAAGGGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: MSEISWKQRLHCSWTSLKKIGTC*IYKGPE Trigger: CTCTGGCCCTTTGTATATGCAGCAAGTGCCTATTTT...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAACATAAAATAGGCACTTaGTGCATATACAAAGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MSEISWKQRLHCSWTSLKHKIGT*CIYKGP Trigger: TGGCCCTTTGTATATGCAGCAAGTGCCTATTTTATG...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CCA 90 bp | AATAGGCACTTGCTGCATATACAAAGGGCCAGAGGTTCGAAAGTAAAAAGTACGATGTCAGAAATCTCTTaGAAGCAAAGGCTTCATTGC | + |
|
Preference number: 2 (lower is better) Translates to: NRHLLHIQRARGSKVKSTMSEIS*KQRLHC Trigger: GCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT...CGTACTTTTTACTTTCGAACCTCTGGCCCTTTGTATATGCAGCAAGTGCCTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGCTGCCCACACTGGTCTaGAAGCGCGGAGAGTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSTHTRGLTAACDCGSRRLPTLV*KRGESA Trigger: TGCAGACTCTCCGCGCTTCAAGACCAGTGTGGGCAG...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | AGAGGGAGACCAGGAGGGCAGCAAGGTGGACAGGGGTaGTGTGGTGGTGTGCACAACATACCTGGGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RGRPGGQQGGQG*CGGVHNIPGPA Trigger: TGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCCCTCCTGGTCTCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR GCA 72 bp | GGCACTGCCCACACTGGTCTTGAAGCGCGGAGAGTCTaGATCACTAGGAACGGGCACAGAGATTTCCACGCC | + |
|
Preference number: 3 (lower is better) Translates to: GTAHTGLEARRV*ITRNGHRDFHA Trigger: GGCGTGGAAATCTCTGTGCCCGTTCCTAGTGATGCAGACTCTCCGCGCTTCAAGACCAGTGTGGGCAGTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | GAGACCAGGAGGGCAGCAAGGTGGACAGGGGTGGTGTaGTGGTGTGCACAACATACCTGGGCCTGCAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: ETRRAARWTGVV*WCAQHTWACSN Trigger: ATTACTGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCCCTCCTGGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR GCA 72 bp | GGGTTAGGTGTGGGCAGCAAGGATGTGTTAAGTCAGTaGCCTAACCCTGCACACACTCGCGTGTGCACACTC | + |
|
Preference number: 3 (lower is better) Translates to: GLGVGSKDVLSQ*PNPAHTRVCTL Trigger: GAGTGTGCACACGCGAGTGTGTGCAGGGTTAGGGCACTGACTTAACACATCCTTGCTGCCCACACCTAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | TTGACAAGTAATCAGTGGGGGCTCCCACACATGCGCTaGTCATTCCCAGCCCCTACCCAAGAAGCACACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTSNQWGLPHMR*SFPAPTQEAHS Trigger: TGAGTGTGCTTCTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTACTTGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | GTGGCCATCGCAGGAGGATTAAGCTGTAGGCCAGCCTaGGCTAGATGGCCAGTTTTCAAAACTCTCAAACAT | + |
|
Preference number: 3 (lower is better) Translates to: VAIAGGLSCRPA*ARWPVFKTLKH Trigger: ATGTTTGAGAGTTTTGAAAACTGGCCATCTAGCCCAGGCTGGCCTACAGCTTAATCCTCCTGCGATGGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAATCCAGATCAGGGGTTaGACCTGGGTGCTAAGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: KSEEAGDGDAVHVRNLLEIQIRG*TWVLSR Trigger: CCGGCTTAGCACCCAGGTCAAACCCCTGATCTGGAT...TTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR TCA 72 bp | CTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTaGAAGCAGCCTGGACTACAAGAGACCTTGTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LGSKGFIAHGQA*KQPGLQETLSQ Trigger: TTGAGACAAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAAGAGATTTCCACGCCATaGGCCACCGACTGCTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SFPEVRRSWRWRCCACQKEISTP*ATDCFL Trigger: TAAGAAGCAGTCGGTGGCCAATGGCGTGGAAATCTC...TTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR GCA 72 bp | TGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTaGTCATGGACAAGCCTGAAAGCAGCCTGGACTACA | + |
|
Preference number: 3 (lower is better) Translates to: CMSEISWKQRLH*SWTSLKAAWTT Trigger: TGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR GCA 72 bp | TCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATaGTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFPEVRRSWRWR*CACQKSLGSKG Trigger: GCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | GCAGGAGGATTAAGCTGTAGGCCAGCCTGGGCTAGATaGCCAGTTTTCAAAACTCTCAAACATAATCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AGGLSCRPAWAR*PVFKTLKHNLK Trigger: TTTGAGATTATGTTTGAGAGTTTTGAAAACTGGCCATCTAGCCCAGGCTGGCCTACAGCTTAATCCTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCCATGTCAGAAATCTCTaGGAAGCAAAGGCTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: VRNLLEAKASLLMDKPESHVRNL*EAKASL Trigger: CAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATG...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | AGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCTaGACTACAAGAGACCTTGTCTCAAAAATAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLHCSWTSLKAA*TTRDLVSKIKA Trigger: TGCTTTTATTTTTGAGACAAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CCA 72 bp | TTAAAATCTTTTCCTGAAGTCAGAAGAAGCTGGAGATaGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LKSFPEVRRSWR*RCCACQKSLGS Trigger: GCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGATTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCAGTAATAAGTGCACTCGGCCGTaGCTCAGCAGCGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWTGVVWWCAQHTWACSNKCTRP*LSSGAS Trigger: GCTGGCCCCGCTGCTGAGCCACGGCCGAGTGCACTT...ATTACTGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCTTGATCCACAGGAAGTaGACTCGGCCGTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSNQWGLPHMRWSFPAPTLIHRK*TRPWLS Trigger: GCTGAGCCACGGCCGAGTGCACTTCCTGTGGATCAA...GGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTACTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTAGAGGTTGCTGTGTTTaGTCCACAGGAAGTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GQQGGQGWCGGVHNIPGPRGCCV*STGSAL Trigger: GAGTGCACTTCCTGTGGATCAAACACAGCAACCTCT...AGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAAGAGCACTCGGTCATTaGGGCCCAGCCGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKRALGH*GPAAAL Trigger: CAGAGCTGCGGCTGGGCCTCAATGACCGAGTGCTCT...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGCCTCAGTTTCCACGCTaGGGAGGCCAAAGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWPQFPR*GGQSGH Trigger: GTGCCCACTTTGGCCTCCCCAGCGTGGAAACTGAGG...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAACTTGACCCCGATGGGTaGTCGGCCCTCTACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKLDPDG*SALYLL Trigger: GAGGAGGTAGAGGGCCGACCACCCATCGGGGTCAAG...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGATGGAATCTCAAACTTaGCCCCGATGGGTGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWMESQT*PRWVVG Trigger: GCCGACCACCCATCGGGGTCAAGTTTGAGATTCCAT...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | GTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGCTTGTTCTTGCTGCCTaGAACAGAAGGTTGACAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VISGGSHTCAGHSQPLPKLVLAA*NRRLTD Trigger: GTCTGTCAACCTTCTGTTTCAGGCAGCAAGAACAAG...CTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGAAAGCCGAAGTCCATaGGCTCATCCAGCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGESRSP*AHPAAR Trigger: ACGAGCTGCTGGATGAGCTCATGGACTTCGGCTTTC...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGCTTTCCCCCAGGGAATaGCTTGATGCTCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWLSPRE*LDAPDD Trigger: GTCATCTGGAGCATCAAGTCATTCCCTGGGGGAAAG...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | AATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGAACTTGTTCTTGCTGCCTaGAAGGCCAGTAAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQWGLPHMRWSFPAPTQELVLAA*KASKLK Trigger: TTTGAGCTTACTGGCCTTTCAGGCAGCAAGAACAAG...TTCTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | TTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTCGTTCTTCAGCGTGGTaGCCACCAAGTAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNDTLKPRWRTSGLGSAARSSAW*PPSRGC Trigger: GCAACCTCTACTTGGTGGCCACCACGCTGAAGAACG...AGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | TGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCAGTAATTTTCGTTCTTCAGCGTGGTaGCCACCAAGTAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WTGVVWWCAQHTWACSNFRSSAW*PPSRGC Trigger: GCAACCTCTACTTGGTGGCCACCACGCTGAAGAACG...AAAATTACTGCAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGCACTTGCTGCATATACAAAGGGCCAGAGGTTCGAAAGTAAAAAGTACGAAGTGCACTCGGCCGTaGCTCAGCAGCGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRHLLHIQRARGSKVKSTKCTRP*LSSGAS Trigger: GCTGGCCCCGCTGCTGAGCCACGGCCGAGTGCACTT...CGTACTTTTTACTTTCGAACCTCTGGCCCTTTGTATATGCAGCAAGTGCCTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTTCTCAGGCACATACTTaGCACTGCCCACACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGSQAHT*HCPHWS Trigger: AGACCAGTGTGGGCAGTGCCAAGTATGTGCCTGAGA...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| 3UTR CAA 72 bp | ATGCTCCAGATGACAACATTCTTCTCAGGCACATACTaGGCACTGCCCACACTGGTCTTGAAGCGCGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLQMTTFFSGTY*ALPTLVLKRGE Trigger: CTCTCCGCGCTTCAAGACCAGTGTGGGCAGTGCCAAGTATGTGCCTGAGAAGAATGTTGTCATCTGGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| 3UTR CAA 72 bp | TGGATGCCAGAAACGGTAAAGTATGGAATCTCAAACTaGACCCCGATGGGTGGTCGGCCCTCTACCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WMPETVKYGISN*TPMGGRPSTSS Trigger: TGAGGAGGTAGAGGGCCGACCACCCATCGGGGTCAAGTTTGAGATTCCATACTTTACCGTTTCTGGCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGTCGTTGTCAAAGCGTaGAAGCCTCACACATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGVVVKA*KPHTLV Trigger: CACCAATGTGTGAGGCTTTCACGCTTTGACAACGAC...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | CATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAACTTGACCCCGATGGGTaGTCGGCCCTCTACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HVRNLLEAKASLLMDKPELDPDG*SALYLL Trigger: GAGGAGGTAGAGGGCCGACCACCCATCGGGGTCAAG...TTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | CATTTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAAGAGGTTGCTGTGTTTaGTCCACAGGAAGTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: HFNDTLKPRWRTSGLGSARGCCV*STGSAL Trigger: GAGTGCACTTCCTGTGGATCAAACACAGCAACCTCT...TGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCATGTTGCCCTGTTGTGTaGTGTACTCCTGCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HFNDTLKPRWRTSGLGSACCPVV*CTPAGS Trigger: AGATCCTGCAGGAGTACATCACACAACAGGGCAACA...TGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGAATTTCTCAATGACTaGCTCGATCCAGATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGEFLND*LDPDQG Trigger: CCCCTGATCTGGATCGAGTCAGTCATTGAGAAATTC...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR GCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCATTGATCCACAGGAAGTaGACTCGGCCGTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEEAGDGDAVHVRNLLEALIHRK*TRPWLS Trigger: GCTGAGCCACGGCCGAGTGCACTTCCTGTGGATCAA...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTATAAAAGGTGGGCCCTAGATCTGCCCAAGGCAGTTTACTGCAAGAAGTTGCTGTCTGTGGTCTaGGGAAAGCCGAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSYKRWALDLPKAVYCKKLLSVV*GKPKSM Trigger: CATGGACTTCGGCTTTCCGCAGACCACAGACAGCAA...CTTCTTGCAGTAAACTGCCTTGGGCAGATCTAGGGCCCACCTTTTATAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTAAGTGCACTCGGCCGTaGCTCAGCAGCGGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMAKCTRP*LSSGAS Trigger: GCTGGCCCCGCTGCTGAGCCACGGCCGAGTGCACTT...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAACCTCAGTTTCCACGCTaGGGAGGCCAAAGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSEEAGDGDAVHVRNLLEPQFPR*GGQSGH Trigger: GTGCCCACTTTGGCCTCCCCAGCGTGGAAACTGAGG...TTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAGAAAGCCGAAGTCCATaGGCTCATCCAGCAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SEEAGDGDAVHVRNLLEAESRSP*AHPAAR Trigger: ACGAGCTGCTGGATGAGCTCATGGACTTCGGCTTTC...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | CATTTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGAATTTCTCAATGACTaGCTCGATCCAGATCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFNDTLKPRWRTSGLGSAEFLND*LDPDQG Trigger: CCCCTGATCTGGATCGAGTCAGTCATTGAGAAATTC...TGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAATGGAATCTCAAACTTaGCCCCGATGGGTGGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEEAGDGDAVHVRNLLEAMESQT*PRWVVG Trigger: GCCGACCACCCATCGGGGTCAAGTTTGAGATTCCAT...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR GCA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAACAGACTTGTTCTTGCTaGCTGAAACAGAAGGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKQTCSC*LKQKVD Trigger: GTCAACCTTCTGTTTCAGGCAGCAAGAACAAGTCTG...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCCGTTCTTCAGCGTGGTaGCCACCAAGTAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRNLLEAKASLLMDKPESRSSAW*PPSRGC Trigger: GCAACCTCTACTTGGTGGCCACCACGCTGAAGAACG...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGAGCCTCACACATTGGTaGAATTTCACATCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWSLTHW*NFTSSS Trigger: ACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCT...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR TCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCAGAGGTTGCTGTGTTTaGTCCACAGGAAGTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EISWKQRLHCSWTSLKAARGCCV*STGSAL Trigger: GAGTGCACTTCCTGTGGATCAAACACAGCAACCTCT...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTAGAGCACTCGGTCATTaGGGCCCAGCCGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMARALGH*GPAAAL Trigger: CAGAGCTGCGGCTGGGCCTCAATGACCGAGTGCTCT...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| 3UTR CAA 72 bp | GTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATaGCTCATGGACAAGCCTGAAAGCAGCCTGGACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHVRNLLEAKAS*LMDKPESSLDY Trigger: GTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| 3UTR CAA 72 bp | GCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTaGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGDGDAVHVRNL*EAKASLLMDKP Trigger: AGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | CCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTTGTTGCCCTGTTGTGTaGTGTACTCCTGCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: PEVRRSWRWRCCACQKSLCCPVV*CTPAGS Trigger: AGATCCTGCAGGAGTACATCACACAACAGGGCAACA...AAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | CATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAACTTTCCCCCAGGGAATaGCTTGATGCTCCAGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HVRNLLEAKASLLMDKPELSPRE*LDAPDD Trigger: GTCATCTGGAGCATCAAGTCATTCCCTGGGGGAAAG...TTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTATAAAAGGTGGGCCCTAGATCTGCCCAAGGCAGTTTACTGCAAGAAGGGTCAATCTCTGTCATaGGCACATCACCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSYKRWALDLPKAVYCKKGQSLS*AHHLCS Trigger: ACTACAAAGGTGATGTGCCCATGACAGAGATTGACC...CTTCTTGCAGTAAACTGCCTTGGGCAGATCTAGGGCCCACCTTTTATAGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTTCCTGAAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATGTTGCCCTGTTGTGTaGTGTACTCCTGCAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPEVRRSWRWRCCACQKCCPVV*CTPAGS Trigger: AGATCCTGCAGGAGTACATCACACAACAGGGCAACA...TTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTTCAGGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTTTGATCCACAGGAAGTaGACTCGGCCGTGGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMALIHRK*TRPWLS Trigger: GCTGAGCCACGGCCGAGTGCACTTCCTGTGGATCAA...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | GAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCGGTCAATCTCTGTCATaGGCACATCACCTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EISWKQRLHCSWTSLKAAGQSLS*AHHLCS Trigger: ACTACAAAGGTGATGTGCCCATGACAGAGATTGACC...GGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CCA 90 bp | AATAGGCACTTGCTGCATATACAAAGGGCCAGAGGTTCGAAAGTAAAAAGTACGTCTCAGGCACATACTTaGCACTGCCCACACTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHLLHIQRARGSKVKSTSQAHT*HCPHWS Trigger: AGACCAGTGTGGGCAGTGCCAAGTATGTGCCTGAGA...CGTACTTTTTACTTTCGAACCTCTGGCCCTTTGTATATGCAGCAAGTGCCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | CATTTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAAGAAACGGTAAAGTATaGAATCTCAAACTTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: HFNDTLKPRWRTSGLGSARNGKV*NLKLDP Trigger: GGGGTCAAGTTTGAGATTCCATACTTTACCGTTTCT...TGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTTCATTGCTCATGGACAAGCCTGAAAGCAGCCTGGACTACAAGAGACCTTAGAAACGGTAAAGTATaGAATCTCAAACTTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLHCSWTSLKAAWTTRDLRNGKV*NLKLDP Trigger: GGGGTCAAGTTTGAGATTCCATACTTTACCGTTTCT...AAGGTCTCTTGTAGTCCAGGCTGCTTTCAGGCTTGTCCATGAGCAATGAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTTTGCTGTCTGTGGTCTaGGGAAAGCCGAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMALLSVV*GKPKSM Trigger: CATGGACTTCGGCTTTCCGCAGACCACAGACAGCAA...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR TCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTGTCGTTGTCAAAGCGTaGAAGCCTCACACATTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMAVVVKA*KPHTLV Trigger: CACCAATGTGTGAGGCTTTCACGCTTTGACAACGAC...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR GCA 90 bp | AATAGGCACTTGCTGCATATACAAAGGGCCAGAGGTTCGAAAGTAAAAAGTACGATCTCCACTCGGCTGTaGGAGAATTTCTCAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: NRHLLHIQRARGSKVKSTISTRL*ENFSMT Trigger: AGTCATTGAGAAATTCTCGCACAGCCGAGTGGAGAT...CGTACTTTTTACTTTCGAACCTCTGGCCCTTTGTATATGCAGCAAGTGCCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGGTGTCAGACAGTAGTAGGGAATAAAAGGAAAGTTGTGGAGGAACCAGAAAGCCTCACACATTGGTaGAATTTCACATCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCQTVVGNKRKVVEEPESLTHW*NFTSSS Trigger: ACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCT...TTCTGGTTCCTCCACAACTTTCCTTTTATTCCCTACTACTGTCTGACACCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTATCTCCACTCGGCTGTaGGAGAATTTCTCAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: IFLHIKLGWDTKKPPQMAISTRL*ENFSMT Trigger: AGTCATTGAGAAATTCTCGCACAGCCGAGTGGAGAT...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | AATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGAACTGCCCACACTGGTCTaGAAGCGCGGAGAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NQWGLPHMRWSFPAPTQELPTLV*KRGESA Trigger: TGCAGACTCTCCGCGCTTCAAGACCAGTGTGGGCAG...TTCTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGCCAGTCTCCAGCTTGTaGCCCTGTTGTGTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSKVDRGGVVVCTTYLGLPVSSL*PCCVMY Trigger: GTACATCACACAACAGGGCAACAAGCTGGAGACTGG...CAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAAGGTGGACAGGGGTGGTGTGGTGGTGTGCACAACATACCTGGGCCTGTATGGAATCTCAAACTaGACCCCGATGGGTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSKVDRGGVVVCTTYLGLYGISN*TPMGGR Trigger: CCGACCACCCATCGGGGTCAAGTTTGAGATTCCATA...CAGGCCCAGGTATGTTGTGCACACCACCACACCACCCCTGTCCACCTTGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | CCTAGCACCCACACCAGAGGGCTCACAGCTGCCTGTGACTGCGGCTCCAGAAGGTCCACAGACTTGTTCTaGCTGCCTGAAAGGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSTHTRGLTAACDCGSRRSTDLF*LPERPV Trigger: TACTGGCCTTTCAGGCAGCAAGAACAAGTCTGTGGA...CCTTCTGGAGCCGCAGTCACAGGCAGCTGTGAGCCCTCTGGTGTGGGTGCTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | GTAATCAGTGGGGGCTCCCACACATGCGCTGGTCATTCCCAGCCCCTACCCAAGGGTGGTACACGAGATTaGCCAGTCTCCAGCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VISGGSHTCAGHSQPLPKGGTRD*PVSSLL Trigger: CAACAAGCTGGAGACTGGCAAATCTCGTGTACCACC...CTTGGGTAGGGGCTGGGAATGACCAGCGCATGTGTGGGAGCCCCCACTGATTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTCTGCCCACACTGGTCTaGAAGCGCGGAGAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FNDTLKPRWRTSGLGSAALPTLV*KRGESA Trigger: TGCAGACTCTCCGCGCTTCAAGACCAGTGTGGGCAG...AGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAATCCAGATCAGGGGTTaGACCTGGGTGCTAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKIQIRG*TWVLSR Trigger: CCGGCTTAGCACCCAGGTCAAACCCCTGATCTGGAT...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
||
| CDS-3UTR CAA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGTTGCCAGTCTCCAGCTaGTTGCCCTGTTGTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWLPVSS*LPCCVM Trigger: CATCACACAACAGGGCAACAAGCTGGAGACTGGCAA...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
||
| CDS-3UTR CAA 90 bp | CCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGGAGATTTCCACGCCATaGGCCACCGACTGCTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: PKTQMEDQWPRLSSYKRWEISTP*ATDCFL Trigger: TAAGAAGCAGTCGGTGGCCAATGGCGTGGAAATCTC...CCACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAACAGCTTGTTGCCCTGTaGTGTGATGTACTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKQLVAL*CDVLLQ Trigger: CTGCAGGAGTACATCACACAACAGGGCAACAAGCTG...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAACCAGTCTCCAGCTTGTaGCCCTGTTGTGTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKPVSSL*PCCVMY Trigger: GTACATCACACAACAGGGCAACAAGCTGGAGACTGG...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | TTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTTTGCCAGTCTCCAGCTaGTTGCCCTGTTGTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FNDTLKPRWRTSGLGSAALPVSS*LPCCVM Trigger: CATCACACAACAGGGCAACAAGCTGGAGACTGGCAA...AGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTGGTACACGAGATTaGCCAGTCTCCAGCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKGGTRD*PVSSLL Trigger: CAACAAGCTGGAGACTGGCAAATCTCGTGTACCACC...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTTATGGAATCTCAAACTaGACCCCGATGGGTGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGYGISN*TPMGGR Trigger: CCGACCACCCATCGGGGTCAAGTTTGAGATTCCATA...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGCAGGAGGAACGCTGGAAGTCAGAGTATGGCCAGCCCTATCTTCAAATCCAGTTCCACAGACTaGTTCTTGCTGCCTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGRRNAGSQSMASPIFKSSSTD*FLLPER Trigger: CCTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGA...TTTGAAGATAGGGCTGGCCATACTCTGACTTCCAGCGTTCCTCCTGCCTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | CATTTTAATGACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGGTGGTACACGAGATTaGCCAGTCTCCAGCTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFNDTLKPRWRTSGLGSAGGTRD*PVSSLL Trigger: CAACAAGCTGGAGACTGGCAAATCTCGTGTACCACC...TGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTCATTAAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | GGCAGAGGCAGGAGGAACGCTGGAAGTCAGAGTATGGCCAGCCCTATCTTCAAATCCAGTTCCACAGACTaGTTCTTGCTGCCTGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: GRGRRNAGSQSMASPIFKSSSTD*FLLPET Trigger: TGTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGA...TTTGAAGATAGGGCTGGCCATACTCTGACTTCCAGCGTTCCTCCTGCCTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTAAGACCTCCACAGTCTaGTACAGAAAGGAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGKTSTV*YRKEYT Trigger: GGTGTACTCCTTTCTGTACAAGACTGTGGAGGTCTT...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCTATAAAAGGTGGGCCCTAGATCTGCCCAAGGCAGTTTACTGCAAGAAGTTGCCAGTCTCCAGCTaGTTGCCCTGTTGTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSYKRWALDLPKAVYCKKLPVSS*LPCCVM Trigger: CATCACACAACAGGGCAACAAGCTGGAGACTGGCAA...CTTCTTGCAGTAAACTGCCTTGGGCAGATCTAGGGCCCACCTTTTATAGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTACACTCCCATTAGCATaGACCAGAAGGTTGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGTLPLA*TRRLTD Trigger: GTCTGTCAACCTTCTGGTCAATGCTAATGGGAGTGT...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | ACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAGGTCTAGCTGGTACGAAGTaGATAATCACCACTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: TLKPRWRTSGLGSAAIKGLAGTK*IITTLR Trigger: ACGCAGAGTGGTGATTATCAACTTCGTACCAGCTAG...ACCTTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
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| CDS CCA 90 bp | GAGATGGTTCGGTCGTTGTCAAAGCGTGAAAGCCTCACACATTGGTaGAATTTCACATCTTCCAGTTCCACAGACTTGTTCTTGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EMVRSLSKRESLTHW*NFTSSSSTDLFLLR Trigger: CCGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCTTTCACGCTTTGACAACGACCGAACCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000213250.2 |
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| CDS-3UTR CAA 90 bp | GGCAGGAGGAACGCTGGAAGTCAGAGTATGGCCAGCCCTATCTTCAAAAATGAAAAGACCTCCACAGTCTaGTACAGAAAGGAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: GRRNAGSQSMASPIFKNEKTSTV*YRKEYT Trigger: GGTGTACTCCTTTCTGTACAAGACTGTGGAGGTCTT...TTCATTTTTGAAGATAGGGCTGGCCATACTCTGACTTCCAGCGTTCCTCCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS CCA 90 bp | GAGATGGTTCGGTCGTTGTCAAAGCGTGAAAGCCTCACACATTGGTaGAATTTCACATCTTCCAGTTCCACAGACTTGTTCTTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EMVRSLSKRESLTHW*NFTSSSSTDLFLLP Trigger: AGGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCTTTCACGCTTTGACAACGACCGAACCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | AAGTCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAACAGCTTGTTGCCCTGTaGTGTGATGTACTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSEEAGDGDAVHVRNLLEQLVAL*CDVLLQ Trigger: CTGCAGGAGTACATCACACAACAGGGCAACAAGCTG...TTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | GACACCCTAAAACCCAGATGGAGGACCAGTGGCCTCGGCTCAGCAGCTATAAAAAAGACCTCATTCTTTTaGTACTTAATGCCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DTLKPRWRTSGLGSAAIKKTSFF*YLMPSE Trigger: CTCTGAGGGCATTAAGTACAAAAAGAATGAGGTCTT...TTTTATAGCTGCTGAGCCGAGGCCACTGGTCCTCCATCTGGGTTTTAGGGTGTC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | TCAGAAGAAGCTGGAGATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGACCTCCACAGTCTaGTACAGAAAGGAGTACACC | + |
|
Preference number: 5 (lower is better) Translates to: SEEAGDGDAVHVRNLLEAKTSTV*YRKEYT Trigger: GGTGTACTCCTTTCTGTACAAGACTGTGGAGGTCTT...TGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATCTCCAGCTTCTTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAACCAGTCTCCAGCTTGTaGCCCTGTTGTGTGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MSEISWKQRLHCSWTSLKPVSSL*PCCVMY Trigger: GTACATCACACAACAGGGCAACAAGCTGGAGACTGG...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCACACTCCCATTAGCATaGACCAGAAGGTTGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRNLLEAKASLLMDKPESTLPLA*TRRLTD Trigger: GTCTGTCAACCTTCTGGTCAATGCTAATGGGAGTGT...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | ATATTTCTTCATATAAAATTAGGGTGGGACACAAAGAAACCACCCCAGATGGCTATCCAGATCAGGGGTTaGACCTGGGTGCTAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLHIKLGWDTKKPPQMAIQIRG*TWVLSR Trigger: CCGGCTTAGCACCCAGGTCAAACCCCTGATCTGGAT...AGCCATCTGGGGTGGTTTCTTTGTGTCCCACCCTAATTTTATATGAAGAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | GTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAGCCTAGCTGGTACGAAGTaGATAATCACCACTCTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VRNLLEAKASLLMDKPESLAGTK*IITTLR Trigger: ACGCAGAGTGGTGATTATCAACTTCGTACCAGCTAG...GCTTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS-3UTR CAA 90 bp | GATGGAGATGCTGTGCATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCAAGACCTCATTCTTTTaGTACTTAATGCCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DGDAVHVRNLLEAKASLLKTSFF*YLMPSE Trigger: CTCTGAGGGCATTAAGTACAAAAAGAATGAGGTCTT...GAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACATGCACAGCATCTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAGAAATCTCTTGGAAGCAAAGGCTTCATTGCTCATGGACAAGCCTGAAAAAGACCTCATTCTTTTaGTACTTAATGCCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: MSEISWKQRLHCSWTSLKKTSFF*YLMPSE Trigger: CTCTGAGGGCATTAAGTACAAAAAGAATGAGGTCTT...TTTCAGGCTTGTCCATGAGCAATGAAGCCTTTGCTTCCAAGAGATTTCTGACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115433.11 ENSMUST00000213762.2 |
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| CDS TCA 72 bp | TCAGCGTGGTGGCCACCAAGTAGAGGTTGCTGTGTTTaGTCCACAGGAAGTGCACTCGGCCGTGGCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SAWWPPSRGCCV*STGSALGRGSA Trigger: TGCTGAGCCACGGCCGAGTGCACTTCCTGTGGATCAAACACAGCAACCTCTACTTGGTGGCCACCACGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CCA 72 bp | CTCAGAGCGCCACGACACCGCATTGGTGACTGTAGGTaGTACACGAGATTTGCCAGTCTCCAGCTTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRAPRHRIGDCR*YTRFASLQLVA Trigger: GGCAACAAGCTGGAGACTGGCAAATCTCGTGTACCACCTACAGTCACCAATGCGGTGTCGTGGCGCTCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 72 bp | GACACCGCATTGGTGACTGTAGGTGGTACACGAGATTaGCCAGTCTCCAGCTTGTTGCCCTGTTGTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: DTALVTVGGTRD*PVSSLLPCCVM Trigger: CATCACACAACAGGGCAACAAGCTGGAGACTGGCAAATCTCGTGTACCACCTACAGTCACCAATGCGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 72 bp | TTGTACTTAATGCCCTCAGAGCGCCACGACACCGCATaGGTGACTGTAGGTGGTACACGAGATTTGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LYLMPSERHDTA*VTVGGTRDLPV Trigger: GACTGGCAAATCTCGTGTACCACCTACAGTCACCAATGCGGTGTCGTGGCGCTCTGAGGGCATTAAGTACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 90 bp | GCATTGGTGACTGTAGGTGGTACACGAGATTTGCCAGTCTCCAGCTaGTTGCCCTGTTGTGTGATGTACTCCTGCAGGATCTTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVTVGGTRDLPVSS*LPCCVMYSCRILLS Trigger: AGACAGCAAGATCCTGCAGGAGTACATCACACAACAGGGCAACAAGCTGGAGACTGGCAAATCTCGTGTACCACCTACAGTCACCAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 72 bp | ACTGTAGGTGGTACACGAGATTTGCCAGTCTCCAGCTaGTTGCCCTGTTGTGTGATGTACTCCTGCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TVGGTRDLPVSS*LPCCVMYSCRI Trigger: GATCCTGCAGGAGTACATCACACAACAGGGCAACAAGCTGGAGACTGGCAAATCTCGTGTACCACCTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 90 bp | TCATTCTTTTTGTACTTAATGCCCTCAGAGCGCCACGACACCGCATaGGTGACTGTAGGTGGTACACGAGATTTGCCAGTCTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFFLYLMPSERHDTA*VTVGGTRDLPVSSL Trigger: CAAGCTGGAGACTGGCAAATCTCGTGTACCACCTACAGTCACCAATGCGGTGTCGTGGCGCTCTGAGGGCATTAAGTACAAAAAGAATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 ENSMUST00000213762.2 |
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| CDS CAA 90 bp | AGCCTCACACATTGGTGGAATTTCACATCTTCCAGTTCCACAGACTaGTTCTTGCTGCGGCCAGTAAGCTCAAAGAGCACTCGGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTHWWNFTSSSSTD*FLLRPVSSKSTRSL Trigger: CAATGACCGAGTGCTCTTTGAGCTTACTGGCCGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000213250.2 |
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| CDS CAA 90 bp | AGCCTCACACATTGGTGGAATTTCACATCTTCCAGTTCCACAGACTaGTTCTTGCTGCCTGAAAGGCCAGTAAGCTCAAAGAGCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SLTHWWNFTSSSSTD*FLLPERPVSSKSTR Trigger: CCGAGTGCTCTTTGAGCTTACTGGCCTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS CAA 90 bp | ACACATTGGTGGAATTTCACATCTTCCAGTTCCACAGACTTGTTCTaGCTGCCTGAAAGGCCAGTAAGCTCAAAGAGCACTCGGTCATTG | + |
|
Preference number: 6 (lower is better) Translates to: THWWNFTSSSSTDLF*LPERPVSSKSTRSL Trigger: CAATGACCGAGTGCTCTTTGAGCTTACTGGCCTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS CCA 72 bp | CGGTCGTTGTCAAAGCGTGAAAGCCTCACACATTGGTaGAATTTCACATCTTCCAGTTCCACAGACTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSLSKRESLTHW*NFTSSSSTDLF Trigger: GAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCTTTCACGCTTTGACAACGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 |
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| CDS CCA 72 bp | GTTCGGTCGTTGTCAAAGCGTGAAAGCCTCACACATTaGTGGAATTTCACATCTTCCAGTTCCACAGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRSLSKRESLTH*WNFTSSSSTDL Trigger: CAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATGTGTGAGGCTTTCACGCTTTGACAACGACCGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003397.9 ENSMUST00000115433.11 ENSMUST00000213250.2 |
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| CDS CAA 72 bp | CATTGGTGGAATTTCACATCTTCCAGTTCCACAGACTaGTTCTTGCTGCGGCCAGTAAGCTCAAAGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: HWWNFTSSSSTD*FLLRPVSSKST Trigger: AGTGCTCTTTGAGCTTACTGGCCGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003397.9 ENSMUST00000213250.2 |
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| CDS CAA 72 bp | TGGAATTTCACATCTTCCAGTTCCACAGACTTGTTCTaGCTGCCTGAAAGGCCAGTAAGCTCAAAGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: WNFTSSSSTDLF*LPERPVSSKST Trigger: AGTGCTCTTTGAGCTTACTGGCCTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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| CDS CAA 72 bp | CATTGGTGGAATTTCACATCTTCCAGTTCCACAGACTaGTTCTTGCTGCCTGAAAGGCCAGTAAGCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: HWWNFTSSSSTD*FLLPERPVSSK Trigger: CTTTGAGCTTACTGGCCTTTCAGGCAGCAAGAACAAGTCTGTGGAACTGGAAGATGTGAAATTCCACCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115433.11 |
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