Pregenerated sensors for AP1AR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074238Ensembl transcript IDs: ENSMUST00000051737.8, ENSMUST00000200409.5
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCCGAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTaGCAAAGTGACAGTCAGTCCTCAGCCCAGCCAAAGACTGCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: CRRERNSKGDRIQCA*QSDSQSSAQPKTAV Trigger: GACTGCAGTCTTTGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR TCA 90 bp | GACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTaGAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: DSKNSTISTWTVLDC*KHAPSLPKREEQQG Trigger: CCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR GCA 90 bp | TTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTaGCGAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: FLPGPSWTVESMHHR*RRERNSKGDRIQCA Trigger: AGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR GCA 90 bp | GAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATaGACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: ELYYFYLDRPGLLKA*TIAAEERGTARETE Trigger: TTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR CCA 90 bp | TTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTaGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: FSRTARTLLFLPGPS*TVESMHHRCRRERN Trigger: GTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR TCA 90 bp | CCAAACTTTGGAAGCATCTTTAATCCTGTCATCTCTTGCTCAGATTaGGTGAAGCAGGACTTAGGATGTGTGCATGTGTGTGTGTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: PNFGSIFNPVISCSD*VKQDLGCVHVCVCV Trigger: CACACACACACACACATGCACACATCCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGATGACAGGATTAAAGATGCTTCCAAAGTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGGAATGGTCTGCCTTCCCGGGGAACCCGCCCATCCCTCCTCATGCTGCCTCAGAACTTGACGAGGTaGGCAGAAAGGCATGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: AGNGLPSRGTRPSLLMLPQNLTR*AERHEC Trigger: ACATTCATGCCTTTCTGCTCACCTCGTCAAGTTCTG...AGGCAGCATGAGGAGGGATGGGCGGGTTCCCCGGGAAGGCAGACCATTCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTGGGAATGGTCTGCCTTCCCGGGGAACCCGCCCATCCCTCCTCATGCTGCCTAAAGGCATGAATGTGTaGTATGTCAGATTCACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: AGNGLPSRGTRPSLLMLPKGMNV*YVRFTE Trigger: CTCAGTGAATCTGACATATCACACATTCATGCCTTT...AGGCAGCATGAGGAGGGATGGGCGGGTTCCCCGGGAAGGCAGACCATTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR GCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGAGCCCAGCCAAAGACTaGAGTCAGGACACATTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GLLKACTIAAEERGTARESPAKD*SQDTFP Trigger: GGGAAATGTGTCCTGACTGCAGTCTTTGGCTGGGCT...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTAAGACGCTGCTGGGAATaGTCTGCCTTCCCGGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVRRCWE*SAFPGN Trigger: GTTCCCCGGGAAGGCAGACCATTCCCAGCAGCGTCT...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACACCAGGGAGACGCTGCTaGGAATGGTCTGCCTTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: EERGTARETEYSVLAKVTPGRRC*EWSAFP Trigger: CGGGAAGGCAGACCATTCCCAGCAGCGTCTCCCTGG...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCACCAGGGAGACGCTGCTaGGAATGGTCTGCCTTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: GQQELYYFYLDRPGLLKAPGRRC*EWSAFP Trigger: CGGGAAGGCAGACCATTCCCAGCAGCGTCTCCCTGG...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCCATCAGCACAATGCTTaGGCCATCTCCAATTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: VPATERLALQGKGKGGTAHQHNA*AISNYC Trigger: GCAGTAATTGGAGATGGCCCAAGCATTGTGCTGATG...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR CAA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTaGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GQQELYYFYLDRPGL*KACTIAAEERGTAR Trigger: CCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCGTGAGCAGAAAGGCATaGATGTGTGATATGTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VPATERLALQGKGKGGTAVSRKA*MCDMSD Trigger: ATCTGACATATCACACATTCATGCCTTTCTGCTCAC...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCCAAAAAGCCTTGGCATaGCACCTGTACATTCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VPATERLALQGKGKGGTAQKALA*HLYILV Trigger: AACTAGAATGTACAGGTGGCATGCCAAGGCTTTTTG...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATCACTGAGTCAGTCCTaGGACGAAGAAGGCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: GDRIQCACQSDSQSSAQPSLSQS*DEEGRC Trigger: ACATCTGCCTTCTTCGTCCCAGGACTGACTCAGTGA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTGCCGAAGACACATTTCCCAGCCCTaGCCTTCTCTAAGACTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLPGPSWTVESMHHRCRRHISQP*PSLRLR Trigger: TCTGAGTCTTAGAGAAGGCCAGGGCTGGGAAATGTG...TCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGATCTCTTGCTCAGATTaGGTGAAGCAGGACTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GLLKACTIAAEERGTAREISCSD*VKQDLG Trigger: TCCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGAT...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCAGTGTGCTTGCCAAAGTaGCAGTCAGTCCTCAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GQQELYYFYLDRPGLLKAVCLPK*QSVLSP Trigger: TGGGCTGAGGACTGACTGTCACTTTGGCAAGCACAC...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | CGCCAAGTAGACATGAAAGGTAAAAGTAACCAGGGAGACGCTGCTGGGAATGGTTCACTGAGTCAGTCCTaGGACGAAGAAGGCAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: RQVDMKGKSNQGDAAGNGSLSQS*DEEGRC Trigger: ACATCTGCCTTCTTCGTCCCAGGACTGACTCAGTGA...ACCATTCCCAGCAGCGTCTCCCTGGTTACTTTTACCTTTCATGTCTACTTGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | TACTGCCGCCAAGTAGACATGAAAGGTAAAAGTAACCAGGGAGACGCTGCTGGGGTGAGCAGAAAGGCATaGATGTGTGATATGTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YCRQVDMKGKSNQGDAAGVSRKA*MCDMSD Trigger: ATCTGACATATCACACATTCATGCCTTTCTGCTCAC...CCCAGCAGCGTCTCCCTGGTTACTTTTACCTTTCATGTCTACTTGGCGGCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACACATCAGCACAATGCTTaGGCCATCTCCAATTACTGC | + |
|
Preference number: 2 (lower is better) Translates to: EERGTARETEYSVLAKVTHQHNA*AISNYC Trigger: GCAGTAATTGGAGATGGCCCAAGCATTGTGCTGATG...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | TACGCTAACATAATTTGTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGATCTCTTGCTCAGATTaGGTGAAGCAGGACTTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YANIICSSHRAPCTTRQRISCSD*VKQDLG Trigger: TCCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGAT...CCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAACAAATTATGTTAGCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTACAAAAAGCCTTGGCATaGCACCTGTACATTCTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVQKALA*HLYILV Trigger: AACTAGAATGTACAGGTGGCATGCCAAGGCTTTTTG...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACACATTTCCCAGCCCTaGCCTTCTCTAAGACTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISFHGQQELYYFYLDRPGHISQP*PSLRLR Trigger: TCTGAGTCTTAGAGAAGGCCAGGGCTGGGAAATGTG...TCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTAAAAGGCATGAATGTGTaGTATGTCAGATTCACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVKGMNV*YVRFTE Trigger: CTCAGTGAATCTGACATATCACACATTCATGCCTTT...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR GCA 90 bp | ACCCACATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTAGAATACAGTGTGCTTaGCAAAGTGACAGTCAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: THISFHGQQELYYFYLDRRIQCA*QSDSQS Trigger: GGACTGACTGTCACTTTGGCAAGCACACTGTATTCT...ACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTATGTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCCATCTCTTGCTCAGATaGAGTGAAGCAGGACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPATERLALQGKGKGGTAHLLLR*SEAGLR Trigger: CCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGATG...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR GCA 72 bp | GGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTaGCGAAGAGAGAGGAACAGCAAGGGAGACAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: GPSWTVESMHHR*RRERNSKGDRI Trigger: TATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCACATCTCTTGCTCAGATaGAGTGAAGCAGGACTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDRIQCACQSDSQSSAQPHLLLR*SEAGLR Trigger: CCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGATG...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR CCA 72 bp | ACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTaGACTGTTGAAAGCATGCACCATCGCTGCCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TARTLLFLPGPS*TVESMHHRCRR Trigger: TCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR TCA 72 bp | GCAGAAAGGCATGAATGTGTGATATGTCAGATTCACTaGGTCAGTCCTGGGACGAAGAAGGCAGATGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: AERHECVICQIH*VSPGTKKADVK Trigger: CTTAACATCTGCCTTCTTCGTCCCAGGACTGACTCAGTGAATCTGACATATCACACATTCATGCCTTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR TCA 72 bp | GGAAGCATCTTTAATCCTGTCATCTCTTGCTCAGATTaGGTGAAGCAGGACTTAGGATGTGTGCATGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSIFNPVISCSD*VKQDLGCVHVC Trigger: ACACACATGCACACATCCTAAGTCCTGCTTCACTCAATCTGAGCAAGAGATGACAGGATTAAAGATGCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| 3UTR TCA 72 bp | AACCAATACAGACTTAAGATGCAGAACTTGACGAGGTaGGCAGAAAGGCATGAATGTGTGATATGTCAGATT | + |
|
Preference number: 3 (lower is better) Translates to: NQYRLKMQNLTR*AERHECVICQI Trigger: AATCTGACATATCACACATTCATGCCTTTCTGCTCACCTCGTCAAGTTCTGCATCTTAAGTCTGTATTGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ATGGTCTGCCTTCCCGGGGAACCCGCCCATCCCTCCTCATGCTGCCTGCACATATCCAGGAGCTTCCGCTaGCTTGCTGCCCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MVCLPGEPAHPSSCCLHISRSFR*LAALAA Trigger: AGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGA...TATGTGCAGGCAGCATGAGGAGGGATGGGCGGGTTCCCCGGGAAGGCAGACCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR CCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGGCTGCCTTGCTGCCCTaGCTGCTTCACGCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLKACTIAAEERGTAREAALLP*LLHAGQ Trigger: CTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGC...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTGCCGAAGACCTTGCTGCCCTGGCTaGTTCACGCTGGGCAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLPGPSWTVESMHHRCRRPCCPG*FTLGSV Trigger: TACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGG...TCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR CCA 90 bp | TACTGCCGCCAAGTAGACATGAAAGGTAAAAGTAACCAGGGAGACGCTGCTGGGCCCACTCCAGCCCGTTaGAGTCATCCGAGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: YCRQVDMKGKSNQGDAAGPTPAR*SHPRRT Trigger: CGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGG...CCCAGCAGCGTCTCCCTGGTTACTTTTACCTTTCATGTCTACTTGGCGGCAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR TCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCTGTCCTAAAATACTTTaGTCCTCCGCCCGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTACPKIL*SSARSL Trigger: CAGCGAGCGGGCGGAGGATCAAAGTATTTTAGGACA...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GCTGGGAATGGTCTGCCTTCCCGGGGAACCCGCCCATCCCTCCTCATGCTGCCTTTTGATAGTCTCCACTaGTGCAATGATAGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGNGLPSRGTRPSLLMLPFDSLH*CNDSAE Trigger: CTCAGCACTATCATTGCAGCAGTGGAGACTATCAAA...AGGCAGCATGAGGAGGGATGGGCGGGTTCCCCGGGAAGGCAGACCATTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCGGTTGCTGCCCTTCTTaGTGCTGTACTTCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTAGCCPS*CCTSVL Trigger: CAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACC...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCCTAGGTCTAAGGAGGTaGTGTCGTCATTTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTALGLRR*CRHFHS Trigger: CGAGTGGAAATGACGACAGCACCTCCTTAGACCTAG...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGGCTGTACTTCAGTGCTaGCCGCAGGATGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKACTIAAEERGTAREAVLQC*PQDVFL Trigger: GAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGC...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGTGCTGCCCTTCTTGCTaGTGTACTTCAGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKACTIAAEERGTARECCPSC*CTSVLP Trigger: GGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCA...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACACCCACTCCAGCCCGTTaGAGTCATCCGAGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: EERGTARETEYSVLAKVTPTPAR*SHPRRT Trigger: CGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGG...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCAACTCTATGGTCAAGTaGTCTCCTCTTGGGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTANSMVK*SPLGHV Trigger: GACATGCCCAAGAGGAGAGCACTTGACCATAGAGTT...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | ATGGTCTGCCTTCCCGGGGAACCCGCCCATCCCTCCTCATGCTGCCTGCACATAAAGGCTAACTGCCTCTaGATTTTCCTATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: MVCLPGEPAHPSSCCLHIKANCL*IFLSTS Trigger: AGATGTGGATAGGAAAATCCAGAGGCAGTTAGCCTT...TATGTGCAGGCAGCATGAGGAGGGATGGGCGGGTTCCCCGGGAAGGCAGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACAAGCAGCCCGAAGCATTaGGTCCAGCAGCAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EERGTARETEYSVLAKVTSSPKH*VQQQFP Trigger: GGGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCT...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCGATAGTCTCCACTGCTaGAATGATAGTGCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTADSLHC*NDSAEQ Trigger: TTGCTCAGCACTATCATTGCAGCAGTGGAGACTATC...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCAAGGCGGACGTGGGGTTaGTGCCCTTCTTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GQQELYYFYLDRPGLLKARRTWG*CPSCCC Trigger: ACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCT...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTATCAGTGAGTGGCCTATaGCTGCTTCCTGGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVSVSGL*LLPGLS Trigger: GGAGAGCCCAGGAAGCAGCCATAGGCCACTCACTGA...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | CGCCAAGTAGACATGAAAGGTAAAAGTAACCAGGGAGACGCTGCTGGGAATGGTCTGGCTGCTTCACGCTaGGCAGCGTATAAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RQVDMKGKSNQGDAAGNGLAASR*AAYKAS Trigger: GGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAG...ACCATTCCCAGCAGCGTCTCCCTGGTTACTTTTACCTTTCATGTCTACTTGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGACAGAATACTGTCCTAAAATACTTTaGTCCTCCGCCCGCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KACTIAAEERGTARETEYCPKIL*SSARSL Trigger: CAGCGAGCGGGCGGAGGATCAAAGTATTTTAGGACA...GTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCTTTGATAGTCTCCACTaGTGCAATGATAGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPATERLALQGKGKGGTAFDSLH*CNDSAE Trigger: CTCAGCACTATCATTGCAGCAGTGGAGACTATCAAA...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | AAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGACAGAATACGGTTGCTGCCCTTCTTaGTGCTGTACTTCAGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KACTIAAEERGTARETEYGCCPS*CCTSVL Trigger: CAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACC...GTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCACCTATGGCTGCTTCCTaGGCTCTCCCCCTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GQQELYYFYLDRPGLLKAPMAAS*ALPLIT Trigger: AGTGATGAGGGGGAGAGCCCAGGAAGCAGCCATAGG...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | TACGCTAACATAATTTGTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGTCAGTGAGTGGCCTATaGCTGCTTCCTGGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YANIICSSHRAPCTTRQRSVSGL*LLPGLS Trigger: GGAGAGCCCAGGAAGCAGCCATAGGCCACTCACTGA...CCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAACAAATTATGTTAGCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ACCCACATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTAGCAGCCCGAAGCATTaGGTCCAGCAGCAGTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: THISFHGQQELYYFYLDRSSPKH*VQQQFP Trigger: GGGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCT...ACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTATGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCTGCCCTTCTTGCTaGTGTACTTCAGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQQELYYFYLDRPGLLKACCPSC*CTSVLP Trigger: GGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCA...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ACCCACATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTAGGCGGACGTGGGGTTaGTGCCCTTCTTGCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: THISFHGQQELYYFYLDRRRTWG*CPSCCC Trigger: ACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCT...ACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTATGTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATGGTCTGTATCAGACTaGTTGATGGCAGAATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDRIQCACQSDSQSSAQPWSVSD*LMAESD Trigger: GTCGGATTCTGCCATCAAGCAGTCTGATACAGACCA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGTCTTGTAAGGCTAACTaGCTCTGGATTTTCCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLKACTIAAEERGTARESCKAN*LWIFLS Trigger: GGATAGGAAAATCCAGAGGCAGTTAGCCTTACAAGA...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACCTATGGCTGCTTCCTaGGCTCTCCCCCTCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: ISFHGQQELYYFYLDRPGPMAAS*ALPLIT Trigger: AGTGATGAGGGGGAGAGCCCAGGAAGCAGCCATAGG...TCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATTCAAAGTCGTCCTCTaGTCCTGCACTTTGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDRIQCACQSDSQSSAQPFKVVL*SCTLIV Trigger: GACTATCAAAGTGCAGGACCAGAGGACGACTTTGAA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATCGTTGATTTGGTTTTaGTCATCAGGTCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GDRIQCACQSDSQSSAQPSLIWF*SSGHSC Trigger: GCAGCTGTGACCTGATGACCAAAACCAAATCAACGA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR TCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCAGTCATTTCCACTCGTTaGTTTGGTTTTGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDRIQCACQSDSQSSAQPVISTR*FGFGHQ Trigger: CTGATGACCAAAACCAAATCAACGAGTGGAAATGAC...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGAGCTGTACTTCAGTGCTaGCCGCAGGATGTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISFHGQQELYYFYLDRPGAVLQC*PQDVFL Trigger: GAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGC...TCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGACAGAATACTCGTTGATTTGGTTTTaGTCATCAGGTCACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KACTIAAEERGTARETEYSLIWF*SSGHSC Trigger: GCAGCTGTGACCTGATGACCAAAACCAAATCAACGA...GTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATTCCACTCGTTGATTTaGTTTTGGTCATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDRIQCACQSDSQSSAQPFHSLI*FWSSGH Trigger: GTGACCTGATGACCAAAACCAAATCAACGAGTGGAA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGAACTCTCTGCTTTTCTTaGTCCAGGAGCTTCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISFHGQQELYYFYLDRPGTLCFS*SRSFRC Trigger: GCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGT...TCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAGATATCGAAAGGGCCACCCACATAAGTTTTCACGGACAGCAAGAACTCTAGGTCTAAGGAGGTaGTGTCGTCATTTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: QFRYRKGHPHKFSRTARTLGLRR*CRHFHS Trigger: CGAGTGGAAATGACGACAGCACCTCCTTAGACCTAG...AGTTCTTGCTGTCCGTGAAAACTTATGTGGGTGGCCCTTTCGATATCTGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | TACGCTAACATAATTTGTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGTGGTCTGTATCAGACTaGTTGATGGCAGAATCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: YANIICSSHRAPCTTRQRWSVSD*LMAESD Trigger: GTCGGATTCTGCCATCAAGCAGTCTGATACAGACCA...CCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAACAAATTATGTTAGCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTACTCTGCTTTTCTTGCTaGCTCTGGATTTTCCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVLCFSC*LWIFLS Trigger: GGATAGGAAAATCCAGAGGCAGCAAGAAAAGCAGAG...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTATTCAAAGTCGTCCTCTaGTCCTGCACTTTGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVFKVVL*SCTLIV Trigger: GACTATCAAAGTGCAGGACCAGAGGACGACTTTGAA...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGATAGTCTCCACTGCTaGAATGATAGTGCTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EERGTARETEYSVLAKVTDSLHC*NDSAEQ Trigger: TTGCTCAGCACTATCATTGCAGCAGTGGAGACTATC...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR TCA 90 bp | TACGCTAACATAATTTGTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGGTCATTTCCACTCGTTaGTTTGGTTTTGGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: YANIICSSHRAPCTTRQRVISTR*FGFGHQ Trigger: CTGATGACCAAAACCAAATCAACGAGTGGAAATGAC...CCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAACAAATTATGTTAGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | ACCCACATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTAACTCTATGGTCAAGTaGTCTCCTCTTGGGCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: THISFHGQQELYYFYLDRNSMVK*SPLGHV Trigger: GACATGCCCAAGAGGAGAGCACTTGACCATAGAGTT...ACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTATGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAATCTTTCTGCTTTTCTaGAATAGAATCATAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLPGPSWTVESMHHRCRRIFLLF*NRIIMP Trigger: CGGCATTATGATTCTATTGCAGAAAAGCAGAAAGAT...TCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAGAGGAACAGCAAGGGAGACAGAATACAGTGTGCTTGCCAAAGTGACATTCCACTCGTTGATTTaGTTTTGGTCATCAGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EERGTARETEYSVLAKVTFHSLI*FWSSGH Trigger: GTGACCTGATGACCAAAACCAAATCAACGAGTGGAA...TGTCACTTTGGCAAGCACACTGTATTCTGTCTCCCTTGCTGTTCCTCTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | CCTCTTGGGCATGTCCTAAAATACTTTGATCCTCCGCCCGCTCGCTaGAGCCGACCCGCTTCCCGGCGGAGCAGCCCGAAGCATTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGHVLKYFDPPPAR*SRPASRRSSPKHCV Trigger: GACGCAATGCTTCGGGCTGCTCCGCCGGGAAGCGGGTCGGCTGCAGCGAGCGGGCGGAGGATCAAAGTATTTTAGGACATGCCCAAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | GGCGGACGTGGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTGCTaGCCGCAGGATGTCTTCCTCTGTCTTGGAGCGCTCCCTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGVAALLAAVLQC*PQDVFLCLGALPHG Trigger: CCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | CCCACTCCAGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTTGCTaGCCTTCTTGCTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PTPARWSHPRRTWGC*PSCCCTSVLPAGCL Trigger: AAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | TCTCCCACTCCAGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTTaGTGCCCTTCTTGCTGCTGTACTTCAGTGCTGCCCGCAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SPTPARWSHPRRTWG*CPSCCCTSVLPAGC Trigger: ACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | AGTCGTTCTCCCACTCCAGCCCGTTGGAGTCATCCGAGGCGGACGTaGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTGCTGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRSPTPARWSHPRRT*GCCPSCCCTSVLPA Trigger: TGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCTCCCACTCCAGCCCGTaGGAGTCATCCGAGGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPATERLALQGKGKGGTASHSSP*ESSEAD Trigger: GTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGA...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | CGAGGCGGACGTGGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTaGTGCCCGCAGGATGTCTTCCTCTGTCTTGGAGCGCTCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGGRGVAALLAAVLQ*CPQDVFLCLGALPH Trigger: ATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | GCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTTaGTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARWSHPRRTWGCCPS*CCTSVLPAGCLPLS Trigger: AGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | CGTTGGAGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTTGCTaGTGTACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWSHPRRTWGCCPSC*CTSVLPAGCLPLSW Trigger: CCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGGAGCAGCCCGAAGCATaGCGTCCAGCAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLKACTIAAEERGTAREEQPEA*RPAAVP Trigger: GGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCTC...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTACCTGGACCGTCCTGGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGGCGGACGTGGGGTaGCTGCCCTTCTTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLPGPSWTVESMHHRCRREADVG*LPFLLL Trigger: CAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTC...TCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS TCA 90 bp | CAAACCCGGAGTACTCAGAGTTGCCGTTGTCGTCCATCTCGGCACTaGCAAAGTCGTTCTCCCACTCCAGCCCGTTGGAGTCATCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTRSTQSCRCRPSRH*QSRSPTPARWSHPR Trigger: CCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCTGAGTACTCCGGGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | CTCTCTGCTTTTCTTGCTCCAGGAGCTTCCGCTGCCTTGCTGCCCTaGCTGCTTCACGCTGGGCAGCGTATAAAGCCTCCTCTTCTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSAFLAPGASAALLP*LLHAGQRIKPPLLV Trigger: GACTAGAAGAGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS CCA 90 bp | TGCTCCAGGAGCTTCCGCTGCCTTGCTGCCCTGGCTGCTTCACGCTaGGCAGCGTATAAAGCCTCCTCTTCTAGTCTTAACTTCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSRSFRCLAALAASR*AAYKASSSSLNFSS Trigger: AGAGGAGAAGTTAAGACTAGAAGAGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGAAAGGGCGGTACAGCCAACTCTCTGCTTTTCTaGCTCCAGGAGCTTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPATERLALQGKGKGGTANSLLF*LQELPL Trigger: CAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTT...GGCTGTACCGCCCTTTCCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS-3UTR CAA 90 bp | CGCCAAGTAGACATGAAAGGTAAAAGTAACCAGGGAGACGCTGCTGGGAATGGTTCCCACTCCAGCCCGTaGGAGTCATCCGAGGCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RQVDMKGKSNQGDAAGNGSHSSP*ESSEAD Trigger: GTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGA...ACCATTCCCAGCAGCGTCTCCCTGGTTACTTTTACCTTTCATGTCTACTTGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTAGAGCAGCCCGAAGCATaGCGTCCAGCAGCAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVEQPEA*RPAAVP Trigger: GGGAACTGCTGCTGGACGCAATGCTTCGGGCTGCTC...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | TGCTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCTTaGAGCGCTCCCTCATGGGCAGCATCCTGTTCATTCCTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CCCTSVLPAGCLPLS*SAPSWAASCSFLLH Trigger: ATGAAGAAGGAATGAACAGGATGCTGCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | TGGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTGTCAGCACTGTaGCGTCAGAGGAGAGTCTACTGCTCCGAAACACTTCATACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSGHSCSRCLVSAL*RQRRVYCSETLHTV Trigger: CACAGTATGAAGTGTTTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | AGGAAAGGGCGGTACAGCCAACGGGACCTTTCAAATCAGAAAGGAGTGTGTGTAATGTCTTCCTCTGTCTaGGAGCGCTCCCTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKGRYSQRDLSNQKGVCVMSSSV*ERSLMG Trigger: GCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACAT...TACACACACTCCTTTCTGATTTGAAAGGTCCCGTTGGCTGTACCGCCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | CGTCATTTCCACTCGTTGATTTGGTTTTGGTCATCAGGTCACAGCTaGTCTCGGTGTTTGGTGTCAGCACTGTGGCGTCAGAGGAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHFHSLIWFWSSGHS*SRCLVSALWRQRRV Trigger: GACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | TCCCCCTCATCACTCTCCACGAGGTTCTCAAACTCTATGGTCAAGTaGTCTCCTCTTGGGCATGTCCTAAAATACTTTGATCCTCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSLSTRFSNSMVK*SPLGHVLKYFDPPP Trigger: GGGCGGAGGATCAAAGTATTTTAGGACATGCCCAAGAGGAGAGCACTTGACCATAGAGTTTGAGAACCTCGTGGAGAGTGATGAGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | GGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTTGATTTGGTTTTaGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTGTCAGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GLRRCCRHFHSLIWF*SSGHSCSRCLVSAL Trigger: CAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GGACTGTTGAAAGCATGCACCATCGCTGCCGAAGAGAGAGGAACAGCAAGGGAGTTTCCACTCGTTGATTaGGTTTTGGTCATCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLLKACTIAAEERGTAREFPLVD*VLVIRS Trigger: TGACCTGATGACCAAAACCAAATCAACGAGTGGAAA...CTCCCTTGCTGTTCCTCTCTCTTCGGCAGCGATGGTGCATGCTTTCAACAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGTTTTCACGGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGAATGTCTTCCTCTGTCTaGGAGCGCTCCCTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFHGQQELYYFYLDRPGMSSSV*ERSLMG Trigger: GCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACAT...TCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCCGTGAAAACTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 90 bp | ACTCTAGGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTTGATTTaGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLGLRRCCRHFHSLI*FWSSGHSCSRCLVS Trigger: TGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCATTTCCACTCGTTGATTaGGTTTTGGTCATCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GDRIQCACQSDSQSSAQPFPLVD*VLVIRS Trigger: TGACCTGATGACCAAAACCAAATCAACGAGTGGAAA...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGAATACAGTGTGCTTGCCAAAGTGACAGTCAGTCCTCAGCCCAGCCACGTCATTTCCACTCGTaGATTTGGTTTTGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GDRIQCACQSDSQSSAQPRHFHS*IWFWSS Trigger: TGATGACCAAAACCAAATCAACGAGTGGAAATGACG...TGGCTGGGCTGAGGACTGACTGTCACTTTGGCAAGCACACTGTATTCTGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | TCTCGGTGTTTGGTGTCAGCACTGTGGCGTCAGAGGAGAGTCTACTaGTCCGAAACACTTCATACTGTGACTTTATGTTTCTTAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SRCLVSALWRQRRVY*SETLHTVTLCFLRK Trigger: CTTCCTTAAGAAACATAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | GGACAGCAAGAACTCTACTATTTCTACCTGGACCGTCCTGGACTGTTGAAAGCAAACTCTCTGCTTTTCTaGCTGCCTCTGGATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQQELYYFYLDRPGLLKANSLLF*LPLDFP Trigger: AGGAAAATCCAGAGGCAGCAAGAAAAGCAGAGAGTT...TGCTTTCAACAGTCCAGGACGGTCCAGGTAGAAATAGTAGAGTTCTTGCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200409.5 |
||
| CDS-3UTR CAA 90 bp | TACGCTAACATAATTTGTTCCAGCCACAGAGCGCCTTGCACTACAAGGCAAAGGCGTCATTTCCACTCGTaGATTTGGTTTTGGTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: YANIICSSHRAPCTTRQRRHFHS*IWFWSS Trigger: TGATGACCAAAACCAAATCAACGAGTGGAAATGACG...CCTTTGCCTTGTAGTGCAAGGCGCTCTGTGGCTGGAACAAATTATGTTAGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 90 bp | AAAGCCTCCTCTTCTAGTCTTAACTTCTCCTCTTGTAAGGCTAACTaGCTCTGGATTTTCCTATCCACATCTTTCTGCTTTTCTGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: KASSSSLNFSSCKAN*LWIFLSTSFCFSAI Trigger: TATTGCAGAAAAGCAGAAAGATGTGGATAGGAAAATCCAGAGGCAGTTAGCCTTACAAGAGGAGAAGTTAAGACTAGAAGAGGAGGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS GCA 72 bp | CCAGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTTaGTGCCCTTCTTGCTGCTGTACTTCAGTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: PARWSHPRRTWG*CPSCCCTSVLP Trigger: GGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | TCGGCACTGACAAAGTCGTTCTCCCACTCCAGCCCGTaGGAGTCATCCGAGGCGGACGTGGGGTTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SALTKSFSHSSP*ESSEADVGLLP Trigger: GGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | TTCTCCCACTCCAGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTaGCTGCCCTTCTTGCTGCTGTACTTCAGTGCTGCCCGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: FSHSSPLESSEADVG*LPFLLLYFSAARRM Trigger: CATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | GCAACTCTCTGCTTTTCTTGCTCCAGGAGCTTCCGCTaGCTTGCTGCCCTGGCTGCTTCACGCTGGGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ATLCFSCSRSFR*LAALAASRWAA Trigger: CGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS CCA 72 bp | CCCACTCCAGCCCGTTGGAGTCATCCGAGGCGGACGTaGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTPARWSHPRRT*GCCPSCCCTSV Trigger: CACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | TCCAGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTaGCTGCCCTTCTTGCTGCTGTACTTCAGTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPLESSEADVG*LPFLLLYFSAA Trigger: GGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | AGCCCGTTGGAGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTaGCTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SPLESSEADVGLLPF*LLYFSAARRMSSSV Trigger: GACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | TCGTCCATCTCGGCACTGACAAAGTCGTTCTCCCACTCCAGCCCGTaGGAGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSISALTKSFSHSSP*ESSEADVGLLPFLL Trigger: CAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | GAGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTaGCTGCTGTACTTCAGTGCTGCCCGCAGGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESSEADVGLLPF*LLYFSAARRMS Trigger: AGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | GGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTGCTaGCCGCAGGATGTCTTCCTCTGTCTTGGAGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GVAALLAAVLQC*PQDVFLCLGAL Trigger: GAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | CGTGGGGTTGCTGCCCTTCTTGCTGCTGTACTTCAGTaGTGCCCGCAGGATGTCTTCCTCTGTCTTGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RGVAALLAAVLQ*CPQDVFLCLGA Trigger: CGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | AGTCATCCGAGGCGGACGTGGGGTTGCTGCCCTTCTTaGTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SHPRRTWGCCPS*CCTSVLPAGCL Trigger: AAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAAGAAGGGCAGCAACCCCACGTCCGCCTCGGATGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 72 bp | TTTCTTGCTCCAGGAGCTTCCGCTGCCTTGCTGCCCTaGCTGCTTCACGCTGGGCAGCGTATAAAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FLAPGASAALLP*LLHAGQRIKPP Trigger: AGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS CAA 72 bp | CTCTCTGCTTTTCTTGCTCCAGGAGCTTCCGCTGCCTaGCTGCCCTGGCTGCTTCACGCTGGGCAGCGTATA | + |
|
Preference number: 6 (lower is better) Translates to: LSAFLAPGASAA*LPWLLHAGQRI Trigger: TATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS CAA 90 bp | GCTGAGCAACTCTCTGCTTTTCTTGCTCCAGGAGCTTCCGCTGCCTaGCTGCCCTGGCTGCTTCACGCTGGGCAGCGTATAAAGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEQLSAFLAPGASAA*LPWLLHAGQRIKPP Trigger: AGGAGGCTTTATACGCTGCCCAGCGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS CAA 90 bp | GTCTCCACTGCTGCAATGATAGTGCTGAGCAACTCTCTGCTTTTCTaGCTCCAGGAGCTTCCGCTGCCTTGCTGCCCTGGCTGCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: VSTAAMIVLSNSLLF*LQELPLPCCPGCFT Trigger: CGTGAAGCAGCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGCACTATCATTGCAGCAGTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS TCA 72 bp | AATGCCGCTCCTGTAAGTCAGCGATTTCGTCTTCAGTaGGTGGCCTATGGCTGCTTCCTGGGCTCTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NAAPVSQRFRLQ*VAYGCFLGSPP Trigger: AGGGGGAGAGCCCAGGAAGCAGCCATAGGCCACTCACTGAAGACGAAATCGCTGACTTACAGGAGCGGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 72 bp | ACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCTTaGAGCGCTCCCTCATGGGCAGCATCCTGTTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: TSVLPAGCLPLS*SAPSWAASCSF Trigger: GAATGAACAGGATGCTGCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | GCTGCAATGATAGTGCTGAGCAACTCTCTGCTTTTCTaGCTCCAGGAGCTTCCGCTGCCTTGCTGCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAMIVLSNSLLF*LQELPLPCCPG Trigger: GCCAGGGCAGCAAGGCAGCGGAAGCTCCTGGAGCAAGAAAAGCAGAGAGTTGCTCAGCACTATCATTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051737.8 |
||
| CDS TCA 72 bp | AGTACTCAGAGTTGCCGTTGTCGTCCATCTCGGCACTaGCAAAGTCGTTCTCCCACTCCAGCCCGTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: STQSCRCRPSRH*QSRSPTPARWS Trigger: ACTCCAACGGGCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCTGAGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 72 bp | GGTCACAGCTGCTCTCGGTGTTTGGTGTCAGCACTGTaGCGTCAGAGGAGAGTCTACTGCTCCGAAACACTT | + |
|
Preference number: 6 (lower is better) Translates to: GHSCSRCLVSAL*RQRRVYCSETL Trigger: AAGTGTTTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | TACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCTaGGAGCGCTCCCTCATGGGCAGCATCCTGTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: YFSAARRMSSSV*ERSLMGSILFI Trigger: AATGAACAGGATGCTGCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | TTGCTGCTGTACTTCAGTGCTGCCCGCAGGATGTCTTCCTCTGTCTaGGAGCGCTCCCTCATGGGCAGCATCCTGTTCATTCCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLYFSAARRMSSSV*ERSLMGSILFIPSS Trigger: TGAAGAAGGAATGAACAGGATGCTGCCCATGAGGGAGCGCTCCAAGACAGAGGAAGACATCCTGCGGGCAGCACTGAAGTACAGCAGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 72 bp | GGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTTaGTGTCAGCACTGTGGCGTCAGAGGAGAGTCTACT | + |
|
Preference number: 6 (lower is better) Translates to: GFGHQVTAALGV*CQHCGVRGEST Trigger: AGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | TGGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTaGGTGTCAGCACTGTGGCGTCAGAGGAGAGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: WFWSSGHSCSRC*VSALWRQRRVY Trigger: GTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | AGTTCTAACACAGGGTTCACAAACCCGGAGTACTCAGAGTTGCCGTaGTCGTCCATCTCGGCACTGACAAAGTCGTTCTCCCACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSNTGFTNPEYSELP*SSISALTKSFSHSS Trigger: GCTGGAGTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCTGAGTACTCCGGGTTTGTGAACCCTGTGTTAGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | TCCGACAGTTCTAACACAGGGTTCACAAACCCGGAGTACTCAGAGTaGCCGTTGTCGTCCATCTCGGCACTGACAAAGTCGTTCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDSSNTGFTNPEYSE*PLSSISALTKSFSH Trigger: GTGGGAGAACGACTTTGTCAGTGCCGAGATGGACGACAACGGCAACTCTGAGTACTCCGGGTTTGTGAACCCTGTGTTAGAACTGTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | CACTCGTTGATTTGGTTTTGGTCATCAGGTCACAGCTaGTCTCGGTGTTTGGTGTCAGCACTGTGGCGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSLIWFWSSGHS*SRCLVSALWRQ Trigger: CTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | TCGTTGATTTGGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTaGGTGTCAGCACTGTGGCGTCAGAGGAGAGTCTACTGCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLIWFWSSGHSCSRC*VSALWRQRRVYCSE Trigger: TTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | AGGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTTGATTTGGTTTaGGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTGTCAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RSKEVLSSFPLVDLV*VIRSQLLSVFGVST Trigger: AGTGCTGACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | CACTCTAGGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTTGATTaGGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRSKEVLSSFPLVD*VLVIRSQLLSVFGV Trigger: GACACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 90 bp | CTTCCCACTCTAGGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTaGATTTGGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPTLGLRRCCRHFHS*IWFWSSGHSCSRCL Trigger: CAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCTAGAGTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CCA 72 bp | AGGTGCTGTCGTCATTTCCACTCGTTGATTTGGTTTTaGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RCCRHFHSLIWF*SSGHSCSRCLV Trigger: CACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | GAGGTGCTGTCGTCATTTCCACTCGTTGATTTGGTTTaGGTCATCAGGTCACAGCTGCTCTCGGTGTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: EVLSSFPLVDLV*VIRSQLLSVFG Trigger: ACCAAACACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | TCTAAGGAGGTGCTGTCGTCATTTCCACTCGTTGATTaGGTTTTGGTCATCAGGTCACAGCTGCTCTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SKEVLSSFPLVD*VLVIRSQLLSV Trigger: CACCGAGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | CGTCCTCTGGTCCTGCACTTTGATAGTCTCCACTGCTaGAATGATAGTGCTGAGCAACTCTCTGCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPLVLHFDSLHC*NDSAEQLSAFL Trigger: AAGAAAAGCAGAGAGTTGCTCAGCACTATCATTGCAGCAGTGGAGACTATCAAAGTGCAGGACCAGAGGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | AGTCGTCCTCTGGTCCTGCACTTTGATAGTCTCCACTaGTGCAATGATAGTGCTGAGCAACTCTCTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRPLVLHFDSLH*CNDSAEQLSAF Trigger: AAAAGCAGAGAGTTGCTCAGCACTATCATTGCAGCAGTGGAGACTATCAAAGTGCAGGACCAGAGGACGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | CTAGGTCTAAGGAGGTGCTGTCGTCATTTCCACTCGTaGATTTGGTTTTGGTCATCAGGTCACAGCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGLRRCCRHFHS*IWFWSSGHSCS Trigger: AGAGCAGCTGTGACCTGATGACCAAAACCAAATCAACGAGTGGAAATGACGACAGCACCTCCTTAGACCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS GCA 72 bp | TTGGTGTCAGCACTGTGGCGTCAGAGGAGAGTCTACTaGTCCGAAACACTTCATACTGTGACTTTATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVSALWRQRRVY*SETLHTVTLCF Trigger: GAAACATAAAGTCACAGTATGAAGTGTTTCGGAGCAGTAGACTCTCCTCTGACGCCACAGTGCTGACACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051737.8 ENSMUST00000200409.5 |
||
| CDS CAA 72 bp | GCTGCAATGATAGTGCTGAGCAACTCTCTGCTTTTCTaGCTGCCTCTGGATTTTCCTATCCACATCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAMIVLSNSLLF*LPLDFPIHIFL Trigger: CAGAAAGATGTGGATAGGAAAATCCAGAGGCAGCAAGAAAAGCAGAGAGTTGCTCAGCACTATCATTGCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200409.5 |
||