Pregenerated sensors for AOX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038242Ensembl transcript IDs: ENSMUST00000040442.6
Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTTGCTCTTATGATAGCGTCTGTACCACAGGAAGTGGCAAGCACTaGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: ACSYDSVCTTGSGKH*KVGFSGVLVLGDSS Trigger: ACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTGGTACAGACGCTATCATAAGAGCAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR GCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTaGCCATCTGGTGAGGACCTCCTTTCTGTCCCAGTAGATGGCATC | + |
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Preference number: 1 (lower is better) Translates to: KSFILVHSLEASSQD*PSGEDLLSVPVDGI Trigger: GATGCCATCTACTGGGACAGAAAGGAGGTCCTCACCAGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGGTTTTTCAGGTGTaGTGGTTTTGGGAGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LLQFQQYHPGSQASSTHLWVFQV*WFWETP Trigger: TGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCA...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CCA 90 bp | AACCTGTCTCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTAGCAAGCACTGGAAAGTaGGTTTTTCAGGTGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: NLSPALRPGSLSTYCLLLASTGK*VFQVCW Trigger: CCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGC...TAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCACCCATATGCTGCTCTaGTTTGGGGCTAGTTTGAAT | + |
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Preference number: 2 (lower is better) Translates to: RCAGFGRLQSRESFGTDSTHMLL*FGASLN Trigger: ATTCAAACTAGCCCCAAACCAGAGCAGCATATGGGT...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGAACAGACAGCTCTGTTaGGTTTCAAACATAGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SSSTSRFPEHLLLALMIANRQLC*VSNIAA Trigger: AGCAGCTATGTTTGAAACCCAACAGAGCTGTCTGTT...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CCA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTTTTGAATCCGCTGCATaGCTTTTCTTTTTCTTAAAG | + |
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Preference number: 2 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFFESAA*LFFFLK Trigger: CTTTAAGAAAAAGAAAAGCCATGCAGCGGATTCAAA...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 34% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | GGCTCACACTGGCAGAGAGGAGGAGGGGCCAGGTTTTaGGGAACTAGTCCATTCCTTCCTGTCACCATTGAT | + |
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Preference number: 3 (lower is better) Translates to: GSHWQRGGGARF*GTSPFLPVTID Trigger: ATCAATGGTGACAGGAAGGAATGGACTAGTTCCCCAAAACCTGGCCCCTCCTCCTCTCTGCCAGTGTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | TACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTaGAGACAAGCTGTATTCAAACCTGTCTCCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: YHPGSQASSTHL*RQAVFKPVSSS Trigger: AGAGCTGGAGACAGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | TGTCCCAGTAGATGGCATCACACACTAGAAATGCAATaGCTCACACTGGCAGAGAGGAGGAGGGGCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: CPSRWHHTLEMQ*LTLAERRRGQV Trigger: AACCTGGCCCCTCCTCCTCTCTGCCAGTGTGAGCCATTGCATTTCTAGTGTGTGATGCCATCTACTGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | GCGTCTGTACCACAGGAAGTGGCAAGCACTGGAAAGTaGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: ASVPQEVASTGK*VFQVCWFWETP Trigger: TGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTGGTACAGACGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CAA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGAACAGACAGCTCTGTaGGGTTTCAAACATAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: YSFNSTTLGARLPAHTFGEQTAL*GFKHSC Trigger: GCAGCTATGTTTGAAACCCAACAGAGCTGTCTGTTC...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CAA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTAGTCTAGAGAGAGTTTaGGAACAGACAGCTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: LLQFQQYHPGSQASSTHLSLERV*EQTALL Trigger: CAACAGAGCTGTCTGTTCCAAAACTCTCTCTAGACT...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR-3UTR CAA 90 bp | GTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTTTCAAACATAGCTGCTaGAAACAAAACACAAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: VPPWEPGFQHTPLETSCIFKHSC*KQNTRR Trigger: CCTCCTTGTGTTTTGTTTCAAGCAGCTATGTTTGAA...AATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR TCA 72 bp | ATTCAAACCTGTCTCCAGCTCTACGTCCAGGTTCCCTaGGCACTTACTGCTTGCTCTTATGATAGCGTCTGT | + |
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Preference number: 3 (lower is better) Translates to: IQTCLQLYVQVP*ALTACSYDSVC Trigger: ACAGACGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTTTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | TATGATAGCGTCTGTACCACAGGAAGTGGCAAGCACTaGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: YDSVCTTGSGKH*KVGFSGVLVLG Trigger: TCCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTGGTACAGACGCTATCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR TCA 72 bp | GTCCATTCCTTCCTGTCACCATTGATCCCTTACCAATaGCCTCTCAATAGGCTCCACCTCTTACAGTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: VHSFLSPLIPYQ*PLNRLHLLQFQ Trigger: TTGAAACTGTAAGAGGTGGAGCCTATTGAGAGGTCATTGGTAAGGGATCAATGGTGACAGGAAGGAATGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR GCA 72 bp | ATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTaGCCATCTGGTGAGGACCTCCTTTCTGTCCCAGTA | + |
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Preference number: 3 (lower is better) Translates to: ILVHSLEASSQD*PSGEDLLSVPV Trigger: TACTGGGACAGAAAGGAGGTCCTCACCAGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CCA 72 bp | ATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTaGTTTGGGGCTAGTTTGAATCCGCTGCATGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: MFDKFSSTHMLL*FGASLNPLHGF Trigger: AAAGCCATGCAGCGGATTCAAACTAGCCCCAAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTAGCTCGCAGCCACCGTaGGTCAGCAGGACAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: PGSQASSTHLWRQAVFKPSSQPP*VSRTEP Trigger: CGGCTCTGTCCTGCTGACCCACGGTGGCTGCGAGCT...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGTCGACACCATCACAGTaGAGGCCCCACAGCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGSTPSQ*RPHSLL Trigger: CAGGAGGCTGTGGGGCCTGCACTGTGATGGTGTCGA...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTGATGGGCACCAGGCATaGTGTTGCTGGGTAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLQFQQYHPGSQASSTHLDGHQA*CCWVVV Trigger: CACCACTACCCAGCAACAGCATGCCTGGTGCCCATC...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | AACCTGTCTCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATCACCATCCCAGGGCTaGAGAAGCCACACTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: NLSPALRPGSLSTYCLLLSPSQG*RSHTGC Trigger: GCACCCAGTGTGGCTTCTGCAGCCCTGGGATGGTGA...TAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | GTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCTTGCAGGTTTGACTTaGAGAGACCACAGTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VPPWEPGFQHTPLETSCILAGLT*RDHSGG Trigger: GCCCCCACTGTGGTCTCTGCAAGTCAAACCTGCAAG...AATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTGTCGGTACTCCACCATaGCTCCCTCAGCATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLQFQQYHPGSQASSTHLVGTPP*LPQHLV Trigger: CACCAGATGCTGAGGGAGGCATGGTGGAGTACCGAC...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CAA 72 bp | GTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTaGGAGACAAGCTGTATTCAAACCTGTCTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VPPWEPGFQHTP*ETSCIQTCLQL Trigger: GAGCTGGAGACAGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCCCACACTGGGTGCCGTaGCACTTGGCAAGTCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RCAGFGRLQSRESFGTDSPHWVP*HLASRS Trigger: GGAACGACTTGCCAAGTGTCACGGCACCCAGTGTGG...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGGCTCCGGGTGGTTCCTaGGCAGTGTGTAGATGGACA | + |
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Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIAAPGGS*AVCRWT Trigger: TGTCCATCTACACACTGCTCAGGAACCACCCGGAGC...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AACCTGTCTCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTAGGGCTTCGGGGTAGCTaGCTTTCAGTTCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: NLSPALRPGSLSTYCLLLGLRGS*LSVPGG Trigger: ACCTCCTGGAACTGAAAGCCAGCTACCCCGAAGCCC...TAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCGCCTCCCTCAGCATCTaGTGGGATGCGGATCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: RCAGFGRLQSRESFGTDSASLSI*WDADLL Trigger: CAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGC...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | ACCTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCGGTATCTTTAAGCTGTaGCAGGCTGTATCCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSYSFNSTTLGARLPAHTGIFKL*QAVSCS Trigger: GGAGCAGGATACAGCCTGGCACAGCTTAAAGATACC...GGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | AACCTGTCTCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTACAGGACCAGCTGGCATaGGTCACTCAGCATTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: NLSPALRPGSLSTYCLLLQDQLA*VTQHLV Trigger: GACCAAATGCTGAGTGACGCATGCCAGCTGGTCCTG...TAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | ACCTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCCTTCCCATTGATATCTaGTCCCATGGAACCCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TSYSFNSTTLGARLPAHTLPIDI*SHGTRS Trigger: ACTGCGGGTTCCATGGGAGCAGATATCAATGGGAAG...GGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGCATGAAGCCAGCAGATaGGCACCAGGCATGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIAHEASR*APGMLL Trigger: CAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATG...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGACCTAATCTGGGGCCCTaGAAGTGTCCTCAGATGTTT | + |
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Preference number: 4 (lower is better) Translates to: YSFNSTTLGARLPAHTFGPNLGP*KCPQMF Trigger: AAACATCTGAGGACACTTGCAGGGCCCCAGATTAGG...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | GTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTAAGTCGTTCCTGCACTaGGTGCACCCTCTTTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: VPPWEPGFQHTPLETSCIKSFLH*VHPLFD Trigger: ATCAAAAAGAGGGTGCACCCAGTGCAGGAACGACTT...AATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGACTTGGGGTGTTTCTATaGGGAAGTCATCTAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: YSFNSTTLGARLPAHTFGLGVFL*GSHLGH Trigger: GTGCCCTAGATGACTTCCCCATAGAAACACCCCAAG...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | ACCTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTGGGATCCACACACTaGAACATCTGGATTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TSYSFNSTTLGARLPAHTLGSTH*NIWIPW Trigger: CCAAGGAATCCAGATGTTCCAGTGTGTGGATCCCAA...GGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTCGGTCCATAAGAATCTaGCAGGCATTCTGTACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LLQFQQYHPGSQASSTHLRSIRI*QAFCTA Trigger: GGCTGTACAGAATGCCTGCCAGATTCTTATGGACCG...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTCCTCACCCAATCCCTTaGATGAGTAGATGGCTATGG | + |
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Preference number: 4 (lower is better) Translates to: PGSQASSTHLWRQAVFKPPHPIP*MSRWLW Trigger: CCATAGCCATCTACTCATCCAAGGGATTGGGTGAGG...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGCACTGTGGTAATGGCTaGTCCATGAAGCCAGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIAHCGNG*SMKPAD Trigger: ATCTGCTGGCTTCATGGAGCAGCCATTACCACAGTG...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGTGTGGCAGGCGATCCTaGTCCTTGGGACATTTAATG | + |
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Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGCGRRS*SLGHLM Trigger: CATTAAATGTCCCAAGGAGCAGGATCGCCTGCCACA...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGAACCTCAGAGCAGGCTaGGCCATAGACATAGTATGG | + |
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Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIANLRAG*AIDIVW Trigger: CCATACTATGTCTATGGCGCAGCCTGCTCTGAGGTT...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGTTGCAGAGACCACAGTaGGGGCAACACTTCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGLQRPQ*GQHFQR Trigger: TCTTTGGAAGTGTTGCCCCCACTGTGGTCTCTGCAA...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTGCGTCACTCAGCATTTaGTCGTCCCATTGCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESASLSI*SSHCLP Trigger: TGGGAGGCAATGGGACGACCAAATGCTGAGTGACGC...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTGATTGGGTGCCCAACTaGATCTTTCTGGGGTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: PGSQASSTHLWRQAVFKPDWVPN*IFLGLF Trigger: AAACAACCCCAGAAAGATCCAGTTGGGCACCCAATC...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGGATGTGATCTTTGCATaGGCCCTGGTACTCGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIADVIFA*ALVLVT Trigger: TGTCACGAGTACCAGGGCCCATGCAAAGATCACATC...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGATACATCAAGTGATGTaGTCTTTGCATGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIAIHQVM*SLHGPW Trigger: CCAGGGCCCATGCAAAGATCACATCACTTGATGTAT...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTCAGTGGCTGAGAGGCTaGTGGATTCTTCAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESQWLRG*WILQRP Trigger: TGGCCTTTGAAGAATCCATCAGCCTCTCAGCCACTG...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGGGTAGCATTTCCAGCTaGCAAAATAGGGTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGGSISS*QNRVEV Trigger: GACCTCAACCCTATTTTGGCAGCTGGAAATGCTACC...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | GTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTATTTCAACTCCTCTGTaGTGTAGAATCCCATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VPPWEPGFQHTPLETSCIISTPL*CRIPCL Trigger: AAGGCATGGGATTCTACACCACAGAGGAGTTGAAAT...AATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGCACTTCAGGTGTTGCTaGGCTATTCAAGGGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGHFRCC*AIQGED Trigger: ATCTTCCCCTTGAATAGCCCAGCAACACCTGAAGTG...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTATGTCAGGAAACTTCTaGGGATCCATTTCATTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQFQQYHPGSQASSTHLMSGNF*GSISFS Trigger: GCTGAATGAAATGGATCCTCAGAAGTTTCCTGACAT...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR TCA 90 bp | CACAGGAAGTGGCAAGCACTGGAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGAATCTCTCCATTGTaGTCATTTTCTCCCGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HRKWQALESGFFRCAGFGRISPL*SFSPGT Trigger: TGTCCCGGGAGAAAATGATCACAATGGAGAGATTCT...CCCAAAACCAGCACACCTGAAAAACCCACTTTCCAGTGCTTGCCACTTCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | AACCTGTCTCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATCTCTACTGGCTACCTaGATCATCTTAGTGTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSPALRPGSLSTYCLLLSLLAT*IILVCR Trigger: CCTACACACTAAGATGATTCAGGTAGCCAGTAGAGA...TAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGAGACAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCTCTCATCTGGATCCATaGAGCATTTCCCAGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCAGFGRLQSRESFGTDSSHLDP*SISQIP Trigger: AGGGATCTGGGAAATGCTGCATGGATCCAGATGAGA...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGACAAACAGTAGACTTCTaGGAGAATGTTTTCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSFNSTTLGARLPAHTFGQTVDF*ENVFPL Trigger: AAGCGGGAAAACATTCTCCCAGAAGTCTACTGTTTG...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAACTCACAAACTTTCCTaGGATGTCAGGAAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YSFNSTTLGARLPAHTFGTHKLS*DVRKLL Trigger: CAGAAGTTTCCTGACATCCCAGGAAAGTTTGTGAGT...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGCCATTTAAAGGGAGCTaGCGATCTTTTCCTTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIAPFKGS*RSFPSL Trigger: TAGAGAAGGAAAAGATCGTCAGCTCCCTTTAAATGG...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTCCTCTGGTATCTCAGTaGTGGTGGGGATTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESPLVSQ*WWGFCS Trigger: ACTACAAAATCCCCACCATCACTGAGATACCAGAGG...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTGATCCGTACAAGCCATaGGAATCACTTCAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESDPYKP*ESLQVL Trigger: CAACACCTGAAGTGATTCGCATGGCTTGTACGGATC...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCACACACTGGAACATCTaGATTCCTTGGGGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RCAGFGRLQSRESFGTDSTHWNI*IPWGVS Trigger: AGAAACACCCCAAGGAATCCAGATGTTCCAGTGTGT...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTCTTTCTGGGGTTGTTTaGGATCCACACACTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESLSGVV*DPHTGT Trigger: TGTTCCAGTGTGTGGATCCCAAACAACCCCAGAAAG...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTGTCCTCAGGAGCTTGTaGGCCCCAGTCAGACAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSFILVHSLEASSQDCPSVLRSL*APVRQS Trigger: GGACTGTCTGACTGGGGCTCACAAGCTCCTGAGGAC...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTAATCACTTCAGGTGTTaGTGGGCTATTCAAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESNHFRC*WAIQGE Trigger: TTCCCCTTGAATAGCCCAGCAACACCTGAAGTGATT...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGTCACGGCATCATATATaGCAAATAAAACTGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSRFPEHLLLALMIASRHHI*QIKLRT Trigger: GGTCCTCAGTTTTATTTGCCATATATGATGCCGTGA...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| 3UTR CAA 72 bp | GTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTaGGAACAGACAGCTCTGTTGGGTTTCAAACATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLVLGDSSLERV*EQTALLGFKHS Trigger: GCTATGTTTGAAACCCAACAGAGCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR TCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTCTCCTTTGGTTGTTCTaGTACCAGAAAATCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESLLWLF*YQKIQG Trigger: ACCTTGGATTTTCTGGTATCAGAACAACCAAAGGAG...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTTCAGCCCTCTCTCCTTaGGGGCAGTGGTCACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFSALSP*GQWSRH Trigger: ATGCCGTGACCACTGCCCGCAAGGAGAGAGGGCTGA...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTATAGAGCACACCTTTTaGGGAGTATTTCAACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESIEHTF*GVFQLL Trigger: GAGGAGTTGAAATACTCCCCAAAAGGTGTGCTCTAT...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTAATGACCTCACTCTGTaGATAAAGAATCTCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ESGFFRCAGFGRLQSRESNDLTL*IKNLSI Trigger: AATGGAGAGATTCTTTATGCACAGAGTGAGGTCATT...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTGTGGTCCTCTTCCCTTaGAATGTCAGCCTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFVVLFP*NVSLLL Trigger: CAAGAGGAGGCTGACATTCCAAGGGAAGAGGACCAC...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTGCAAGGCAGAGTTCTTaGTCAATGGGAGGCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSFILVHSLEASSQDCPSARQSS*SMGGMS Trigger: TGACATGCCTCCCATTGACCAAGAACTCTGCCTTGC...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR GCA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTATTTGGTCGTCCCATTaGCTCCCAATGAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFIWSSH*LPMSCL Trigger: CAAGCAGCTCATTGGGAGGCAATGGGACGACCAAAT...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTCCCGCTTTCTACAATTaGTCGATATCCAGTGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: KSFILVHSLEASSQDCPSPAFYN*SISSAS Trigger: CGATGCACTGGATATCGACCAATTGTAGAAAGCGGG...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTGACATAGAACTCCTCTaGTATCTCAGTGATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFILVHSLEASSQDCPSDIELL*YLSDGG Trigger: CCCACCATCACTGAGATACCAGAGGAGTTCTATGTC...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTCCAGATCCCTTCATTTaGCAAACAGTAGACTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFILVHSLEASSQDCPSPDPFI*QTVDFW Trigger: CCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGG...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 90 bp | GGGTGCGTCGGTACTCCACCATGCCTCCCTCAGCATCTGGTGGGATaGGGATCTCCTGCAGGACCAGCTGGCATGCGTCACTCAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: GCVGTPPCLPQHLVG*GSPAGPAGMRHSAF Trigger: AAATGCTGAGTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGCATGGTGGAGTACCGACGCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 90 bp | TACTCCACCATGCCTCCCTCAGCATCTGGTGGGATGCGGATCTCCTaGAGGACCAGCTGGCATGCGTCACTCAGCATTTGGTCGTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: YSTMPPSASGGMRIS*RTSWHASLSIWSSH Trigger: ATGGGACGACCAAATGCTGAGTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGCATGGTGGAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 90 bp | ATGCTGAAGGCAGCATCCACGAAGATGTCGGTCCTCAGGAGCTTGTaGGCCCCAGTCAGACAGTCCACTTCAACCTCAGAGCAGGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: MLKAASTKMSVLRSL*APVRQSTSTSEQAA Trigger: CGCAGCCTGCTCTGAGGTTGAAGTGGACTGTCTGACTGGGGCTCACAAGCTCCTGAGGACCGACATCTTCGTGGATGCTGCCTTCAGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 90 bp | GAAGCCACACTGGGTGCCGTGACACTTGGCAAGTCGTTCCTGCACTaGGTGCACCCTCTTTTTGATGCTCCCCACACCTTCCACTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EATLGAVTLGKSFLH*VHPLFDAPHTFHCG Trigger: ACCACAGTGGAAGGTGTGGGGAGCATCAAAAAGAGGGTGCACCCAGTGCAGGAACGACTTGCCAAGTGTCACGGCACCCAGTGTGGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CAA 90 bp | TCCAGCTCTACGTCCAGGTTCCCTGAGCACTTACTGCTTGCTCTTATGATAGCGCTCAGCCCTCTCTCCTaGCGGGCAGTGGTCACGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSTSRFPEHLLLALMIALSPLS*RAVVTA Trigger: TGCCGTGACCACTGCCCGCAAGGAGAGAGGGCTGAG...CGCTATCATAAGAGCAAGCAGTAAGTGCTCAGGGAACCTGGACGTAGAGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 90 bp | GGTGGCGGCCAGCTGTTATCAGCATGTCATCACTTCGTTCTAGGATaGAGCGGATTGGGCGGCCAGTCTTGTTGGCAGCCACAGCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGGQLLSACHHFVLG*SGLGGQSCWQPQHR Trigger: TCTGTGCTGTGGCTGCCAACAAGACTGGCCGCCCAATCCGCTTCATCCTAGAACGAAGTGATGACATGCTGATAACAGCTGGCCGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CAA 90 bp | ACCTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCGCACCAGGCATGCTGTaGCTGGGTAGTGGTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: TSYSFNSTTLGARLPAHTAPGML*LGSGGS Trigger: AGATCCACCACTACCCAGCAACAGCATGCCTGGTGC...GGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | ACCTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCGCAGGCTTGGTCACTTaGCCCCCAAATGCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSYSFNSTTLGARLPAHTAGLVT*PPNAPP Trigger: TGGAGGAGCATTTGGGGGCAAAGTGACCAAGCCTGC...GGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | TCTTGTTGGCAGCCACAGCACAGACAGCTCCCAGTAGAGCAGGCTTaGTCACTTTGCCCCCAAATGCTCCTCCAGCTCTTTTCATGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCWQPQHRQLPVEQA*SLCPQMLLQLFSCG Trigger: GCCACATGAAAAGAGCTGGAGGAGCATTTGGGGGCAAAGTGACCAAGCCTGCTCTACTGGGAGCTGTCTGTGCTGTGGCTGCCAACAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 90 bp | AAGTGCACGTACGACTTGGGGACGTTGAGTTCTCTACTGGCTACCTaGATCATCTTAGTGTGTAGGCCTTGTCCCAGCTCGCAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: KCTYDLGTLSSLLAT*IILVCRPCPSSQPP Trigger: CGGTGGCTGCGAGCTGGGACAAGGCCTACACACTAAGATGATTCAGGTAGCCAGTAGAGAACTCAACGTCCCCAAGTCGTACGTGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | AGATGGGCACCAGGCATGCTGTTGCTGGGTAGTGGTGGATCTTCCTaGTCTTTGGATTATATCTCGACACCATCACAGTGCAGGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RWAPGMLLLGSGGSS*SLDYISTPSQCRPH Trigger: GTGGGGCCTGCACTGTGATGGTGTCGAGATATAATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTGGTGGTCCTCTTCCCTaGGAATGTCAGCCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PGSQASSTHLWRQAVFKPGGPLP*ECQPPL Trigger: AAGAGGAGGCTGACATTCCAAGGGAAGAGGACCACC...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 90 bp | CTTGTGAGCCCCAGTCAGACAGTCCACTTCAACCTCAGAGCAGGCTaGGCCATAGACATAGTATGGGTAGGGATCACCTTCCTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LVSPSQTVHFNLRAG*AIDIVWVGITFLLL Trigger: AAGAAGGAGGAAGGTGATCCCTACCCATACTATGTCTATGGCGCAGCCTGCTCTGAGGTTGAAGTGGACTGTCTGACTGGGGCTCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | GGCTTGGTCACTTTGCCCCCAAATGCTCCTCCAGCTCTTTTCATGTaGCAGGCGATCCTGCTCCTTGGGACATTTAATGCTGCAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: GLVTLPPNAPPALFM*QAILLLGTFNAADT Trigger: TGTGTCTGCAGCATTAAATGTCCCAAGGAGCAGGATCGCCTGCCACATGAAAAGAGCTGGAGGAGCATTTGGGGGCAAAGTGACCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 90 bp | TGTGGTAATGGCTGCTCCATGAAGCCAGCAGATGGGCACCAGGCATaGTGTTGCTGGGTAGTGGTGGATCTTCCTGGTCTTTGGATTATA | + |
|
Preference number: 5 (lower is better) Translates to: CGNGCSMKPADGHQA*CCWVVVDLPGLWII Trigger: TATAATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATGGAGCAGCCATTACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 90 bp | TTAGATGCTACCGCAGCGATGTATGCTTCGACGACCACCGTAGCCTaGGGGAAGCCAAATCCTCGGAAAGCCGTGTTAGATGGTAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LDATAAMYASTTTVA*GKPNPRKAVLDGKF Trigger: AAACTTACCATCTAACACGGCTTTCCGAGGATTTGGCTTCCCTCAGGCTACGGTGGTCGTCGAAGCATACATCGCTGCGGTAGCATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGACCCAGATCCCTTCATTaGGCAAACAGTAGACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YSFNSTTLGARLPAHTFGPRSLH*ANSRLL Trigger: CAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGG...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | TACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGAACATCTGGATTCCTaGGGGTGTTTCTATGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSFNSTTLGARLPAHTFGEHLDS*GCFYGE Trigger: TTCCCCATAGAAACACCCCAAGGAATCCAGATGTTC...TCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTGGCAAGGCAGAGTTCTaGGTCAATGGGAGGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESGFFRCAGFGRLQSRESGKAEF*VNGRHV Trigger: GACATGCCTCCCATTGACCAAGAACTCTGCCTTGCC...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCAGGCGATCCTGCTCCTaGGGACATTTAATGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCAGFGRLQSRESFGTDSRRSCS*GHLMLQ Trigger: CTGCAGCATTAAATGTCCCAAGGAGCAGGATCGCCT...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTGTACAGCCTTCCCATaGATATCTGCTCCCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLQFQQYHPGSQASSTHLCTAFP*ISAPME Trigger: TTCCATGGGAGCAGATATCAATGGGAAGGCTGTACA...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | TGTGGCATGTTTAATACCCGACTGGTGCATGATTGGGTGCCCAACTaGATCTTTCTGGGGTTGTTTGGGATCCACACACTGGAACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CGMFNTRLVHDWVPN*IFLGLFGIHTLEHL Trigger: CAGATGTTCCAGTGTGTGGATCCCAAACAACCCCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | TATAGCTTCCCCTGTGGCATGTTTAATACCCGACTGGTGCATGATTaGGTGCCCAACTGGATCTTTCTGGGGTTGTTTGGGATCCACACA | + |
|
Preference number: 5 (lower is better) Translates to: YSFPCGMFNTRLVHD*VPNWIFLGLFGIHT Trigger: TGTGTGGATCCCAAACAACCCCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGGGAAGCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | TTTGCATGGGCCCTGGTACTCGTGACAACGGCAAGGCAGAGTTCTTaGTCAATGGGAGGCATGTCATCAATAAATATAGCTTCCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FAWALVLVTTARQSS*SMGGMSSINIASPV Trigger: CACAGGGGAAGCTATATTTATTGATGACATGCCTCCCATTGACCAAGAACTCTGCCTTGCCGTTGTCACGAGTACCAGGGCCCATGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTGGATCTTCCTGGTCTTaGGATTATATCTCGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSQASSTHLWRQAVFKPGSSWS*DYISTP Trigger: TGGTGTCGAGATATAATCCAAAGACCAGGAAGATCC...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | CTCTTACAGTTTCAACAGTACCACCCTGGGAGCCAGGCTTCCAGCACACACCTTTTCTTTGTCTTCAGTTaGTGGGATAGCCAGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLQFQQYHPGSQASSTHLFFVFS*WDSQDG Trigger: ACCATCCTGGCTATCCCACAAACTGAAGACAAAGAA...AAGGTGTGTGCTGGAAGCCTGGCTCCCAGGGTGGTACTGTTGAAACTGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | TTAGGGTTTTTCCTGATGATGGGCCGAAGACGGTCCATAAGAATCTaGCAGGCATTCTGTACAGCCTTCCCATTGATATCTGCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGFFLMMGRRRSIRI*QAFCTAFPLISAPM Trigger: CATGGGAGCAGATATCAATGGGAAGGCTGTACAGAATGCCTGCCAGATTCTTATGGACCGTCTTCGGCCCATCATCAGGAAAAACCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | CCTGGGAGCCAGGCTTCCAGCACACACCTTTGGAGACAAGCTGTATTCAAACCTCCTATTGTTACCCCATaGTTTGTGGTGTCCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGSQASSTHLWRQAVFKPPIVTP*FVVSIR Trigger: TCTTATGGACACCACAAACAATGGGGTAACAATAGG...AGGTTTGAATACAGCTTGTCTCCAAAGGTGTGTGCTGGAAGCCTGGCTCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTGGATCTTTCTGGGGTaGTTTGGGATCCACACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ESGFFRCAGFGRLQSRESWIFLG*FGIHTL Trigger: CAGTGTGTGGATCCCAAACAACCCCAGAAAGATCCA...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 90 bp | GACAATAGCAAAGGCATTTTCCTGACGCTGTGCCAACCGGAGTCCTaGCACAAACTGCCACTGAGCAGTGTAAGGAATGAAAATGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: DNSKGIFLTLCQPES*HKLPLSSVRNENGQ Trigger: TTGTCCATTTTCATTCCTTACACTGCTCAGTGGCAGTTTGTGTCAGGACTCCGGTTGGCACAGCGTCAGGAAAATGCCTTTGCTATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 90 bp | GGTGTGAATGTTGAAGGGTCATCTCTGGGAATCATCTCAGTAAACTaGTCCGTACAAGCCATGCGAATCACTTCAGGTGTTGCTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GVNVEGSSLGIISVN*SVQAMRITSGVAGL Trigger: TAGCCCAGCAACACCTGAAGTGATTCGCATGGCTTGTACGGATCAGTTTACTGAGATGATTCCCAGAGATGACCCTTCAACATTCACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 90 bp | GGTCCTCTTCCCTTGGAATGTCAGCCTCCTCTTGTTTGGATCTTCTaGCATTCTAATCAGTTCAGGAGGAAATATAGGTTCCTGGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLPLECQPPLVWIF*HSNQFRRKYRFLGW Trigger: CCATCCCAGGAACCTATATTTCCTCCTGAACTGATTAGAATGGCAGAAGATCCAAACAAGAGGAGGCTGACATTCCAAGGGAAGAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCGATAGCCAGGATGGTTaGCGTTTCCATGTAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RCAGFGRLQSRESFGTDSDSQDG*RFHVKV Trigger: CACTTTTACATGGAAACGCAAACCATCCTGGCTATC...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AAGAGTTTTATTTTGGTTCATAGTTTAGAGGCAAGTTCACAAGACTGCCCATCTGGGCGGCCAGTCTTGTaGGCAGCCACAGCACAGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSFILVHSLEASSQDCPSGRPVL*AATAQT Trigger: TGTCTGTGCTGTGGCTGCCAACAAGACTGGCCGCCC...AGATGGGCAGTCTTGTGAACTTGCCTCTAAACTATGAACCAAAATAAAACTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 90 bp | TCAGCCTCAGGCAACTTCTCCAGGAAAGGGCCATTTAAAGGGAGCTaGCGATCTTTTCCTTCTCTAGATACCACGTTGATGGTAGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SASGNFSRKGPFKGS*RSFPSLDTTLMVAF Trigger: AAATGCTACCATCAACGTGGTATCTAGAGAAGGAAAAGATCGTCAGCTCCCTTTAAATGGCCCTTTCCTGGAGAAGTTGCCTGAGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 90 bp | TCAATAAATATAGCTTCCCCTGTGGCATGTTTAATACCCGACTGGTaGATGATTGGGTGCCCAACTGGATCTTTCTGGGGTTGTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SINIASPVACLIPDW*MIGCPTGSFWGCLG Trigger: TCCCAAACAACCCCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGGGAAGCTATATTTATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | GATCCAGGTGGTCCTCTTCCCTTGGAATGTCAGCCTCCTCTTGTTTaGATCTTCTGCCATTCTAATCAGTTCAGGAGGAAATATAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPGGPLPLECQPPLV*IFCHSNQFRRKYRF Trigger: GAACCTATATTTCCTCCTGAACTGATTAGAATGGCAGAAGATCCAAACAAGAGGAGGCTGACATTCCAAGGGAAGAGGACCACCTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | CCACTGAGCAGTGTAAGGAATGAAAATGGACAAGATAACCTCTTCTaGTTTCAAGTCAGCCTCAGGCAACTTCTCCAGGAAAGGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PLSSVRNENGQDNLF*FQVSLRQLLQERAI Trigger: AATGGCCCTTTCCTGGAGAAGTTGCCTGAGGCTGACTTGAAACCAGAAGAGGTTATCTTGTCCATTTTCATTCCTTACACTGCTCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGTGGGTTTTTCAGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTGGAGAAAGGAAAGAATaGTGTTCTAGGGCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGFFRCAGFGRLQSRESGERKE*CSRASS Trigger: AGAGGAAGCCCTAGAACACAATTCTTTCCTTTCTCC...ACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCTGAAAAACCCACTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 90 bp | CTCTATGTCATCATAAGCAATCTTCACTCGTTTAGCTGCTTCTTTTaGATGGATGTAGGTATCAGCAGCCACGGTGCAGATGATCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LYVIISNLHSFSCFF*MDVGISSHGADDLT Trigger: GGTCAGATCATCTGCACCGTGGCTGCTGATACCTACATCCATGCAAAAGAAGCAGCTAAACGAGTGAAGATTGCTTATGATGACATAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 90 bp | CACTTCTCATCTGGATCCATGCAGCATTTCCCAGATCCCTTCATTTaGCAAACAGTAGACTTCTGGGAGAATGTTTTCCCGCTTTCTACA | + |
|
Preference number: 5 (lower is better) Translates to: HFSSGSMQHFPDPFI*QTVDFWENVFPLST Trigger: TGTAGAAAGCGGGAAAACATTCTCCCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGGAAATGCTGCATGGATCCAGATGAGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGCTGGTTTTGGGAGACTCCAGTCTAGAGAGAGTTTTGGAACAGACAGCAACATCTTAAGATCCTaGATCGTGTTTGTACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCAGFGRLQSRESFGTDSNILRS*IVFVPS Trigger: GGAAGGTACAAACACGATCAAGGATCTTAAGATGTT...GCTGTCTGTTCCAAAACTCTCTCTAGACTGGAGTCTCCCAAAACCAGCACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 90 bp | TTTCTGGAGGGCGTGAAAGGTTTTGGTCTTCTCCTTTGGTTGTTCTaGTACCAGAAAATCCAAGGTATCTTTAAGCTGTGCCAGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FLEGVKGFGLLLWLF*YQKIQGIFKLCQAV Trigger: TACAGCCTGGCACAGCTTAAAGATACCTTGGATTTTCTGGTATCAGAACAACCAAAGGAGAAGACCAAAACCTTTCACGCCCTCCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 90 bp | TTCTGCCATTCTAATCAGTTCAGGAGGAAATATAGGTTCCTGGGATaGGTCAAACGGCTGGAACTCATCTTCATTATACAGTTTAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FCHSNQFRRKYRFLG*VKRLELIFIIQFST Trigger: TGTACTAAACTGTATAATGAAGATGAGTTCCAGCCGTTTGACCCATCCCAGGAACCTATATTTCCTCCTGAACTGATTAGAATGGCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CAA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTTCTTTCTGGGGTTGTTaGGGATCCACACACTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFSFWGC*GSTHWN Trigger: GTTCCAGTGTGTGGATCCCAAACAACCCCAGAAAGA...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 90 bp | ATCAGTTCAGGAGGAAATATAGGTTCCTGGGATGGGTCAAACGGCTaGAACTCATCTTCATTATACAGTTTAGTACACATCTTTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISSGGNIGSWDGSNG*NSSSLYSLVHIFFS Trigger: AGAGAAAAAGATGTGTACTAAACTGTATAATGAAGATGAGTTCCAGCCGTTTGACCCATCCCAGGAACCTATATTTCCTCCTGAACTGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS-3UTR CAA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTAATGTCAGCCTCCTCTaGTTTGGATCTTCTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFNVSLL*FGSSAI Trigger: AATGGCAGAAGATCCAAACAAGAGGAGGCTGACATT...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTTTCATGAACCCAATTTaGTATTTTCCCAGGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFFMNPI*YFPRSG Trigger: CCCACTCCTGGGAAAATACAAAATTGGGTTCATGAA...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS-3UTR CAA 90 bp | AACAGTAAAATCATGTTTGATAAATTCTCGTCAACCCATATGCTGCTCTGGTTTTGTAACACCATTTCTTaGTCTTCAGTTTGTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: NSKIMFDKFSSTHMLLWFCNTIS*SSVCGI Trigger: TATCCCACAAACTGAAGACAAAGAAATGGTGTTACA...AAACCAGAGCAGCATATGGGTTGACGAGAATTTATCAAACATGATTTTACTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | GGTGCGTCGGTACTCCACCATGCCTCCCTCAGCATCTaGTGGGATGCGGATCTCCTGCAGGACCAGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GASVLHHASLSI*WDADLLQDQLA Trigger: TGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGCATGGTGGAGTACCGACGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 72 bp | GGTACTCCACCATGCCTCCCTCAGCATCTGGTGGGATaGGGATCTCCTGCAGGACCAGCTGGCATGCGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTPPCLPQHLVG*GSPAGPAGMRH Trigger: GTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGCTGAGGGAGGCATGGTGGAGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 72 bp | TGGTGGGATGCGGATCTCCTGCAGGACCAGCTGGCATaGGTCACTCAGCATTTGGTCGTCCCATTGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: WWDADLLQDQLA*VTQHLVVPLPP Trigger: GGGAGGCAATGGGACGACCAAATGCTGAGTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | AATACCGGGTCCCACTGTGGTGTTCCCCATGACGAGTaGGGCTTCGGGGTAGCTGGCTTTCAGTTCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: NTGSHCGVPHDE*GFGVAGFQFQE Trigger: CTCCTGGAACTGAAAGCCAGCTACCCCGAAGCCCCACTCGTCATGGGGAACACCACAGTGGGACCCGGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | GCATCTGGTGGGATGCGGATCTCCTGCAGGACCAGCTaGCATGCGTCACTCAGCATTTGGTCGTCCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGGMRISCRTS*HASLSIWSSHC Trigger: GCAATGGGACGACCAAATGCTGAGTGACGCATGCCAGCTGGTCCTGCAGGAGATCCGCATCCCACCAGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 90 bp | GCAGCCACAGCACAGACAGCTCCCAGTAGAGCAGGCTTGGTCACTTaGCCCCCAAATGCTCCTCCAGCTCTTTTCATGTGGCAGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: AATAQTAPSRAGLVT*PPNAPPALFMWQAI Trigger: GATCGCCTGCCACATGAAAAGAGCTGGAGGAGCATTTGGGGGCAAAGTGACCAAGCCTGCTCTACTGGGAGCTGTCTGTGCTGTGGCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 72 bp | CATCGGCACAAATTCCCTCCAAGAGCCTCCGTGATCTaGTCAGGTGTCGGCTCCGGGTGGTTCCTGAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: HRHKFPPRASVI*SGVGSGWFLSS Trigger: ACTGCTCAGGAACCACCCGGAGCCGACACCTGATCAGATCACGGAGGCTCTTGGAGGGAATTTGTGCCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 72 bp | GGCTGCTCCATGAAGCCAGCAGATGGGCACCAGGCATaGTGTTGCTGGGTAGTGGTGGATCTTCCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GCSMKPADGHQA*CCWVVVDLPGL Trigger: AAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATGGAGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | CTGGGTGCCGTGACACTTGGCAAGTCGTTCCTGCACTaGGTGCACCCTCTTTTTGATGCTCCCCACACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LGAVTLGKSFLH*VHPLFDAPHTF Trigger: GAAGGTGTGGGGAGCATCAAAAAGAGGGTGCACCCAGTGCAGGAACGACTTGCCAAGTGTCACGGCACCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 72 bp | CGTTCTAGGATGAAGCGGATTGGGCGGCCAGTCTTGTaGGCAGCCACAGCACAGACAGCTCCCAGTAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRMKRIGRPVL*AATAQTAPSRA Trigger: TGCTCTACTGGGAGCTGTCTGTGCTGTGGCTGCCAACAAGACTGGCCGCCCAATCCGCTTCATCCTAGAACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 72 bp | CTGGCAGGCATTCTGTACAGCCTTCCCATTGATATCTaGTCCCATGGAACCCGCAGTGAAGGCGGAGTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGILYSLPIDI*SHGTRSEGGVG Trigger: CCCAACTCCGCCTTCACTGCGGGTTCCATGGGAGCAGATATCAATGGGAAGGCTGTACAGAATGCCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 72 bp | CTTCGTTCTAGGATGAAGCGGATTGGGCGGCCAGTCTaGTTGGCAGCCACAGCACAGACAGCTCCCAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSRMKRIGRPV*LAATAQTAPSR Trigger: TCTACTGGGAGCTGTCTGTGCTGTGGCTGCCAACAAGACTGGCCGCCCAATCCGCTTCATCCTAGAACGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 72 bp | ACCGCAGCGATGTATGCTTCGACGACCACCGTAGCCTaGGGGAAGCCAAATCCTCGGAAAGCCGTGTTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TAAMYASTTTVA*GKPNPRKAVLD Trigger: ATCTAACACGGCTTTCCGAGGATTTGGCTTCCCTCAGGCTACGGTGGTCGTCGAAGCATACATCGCTGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 72 bp | CTCCATGAAGCCAGCAGATGGGCACCAGGCATGCTGTaGCTGGGTAGTGGTGGATCTTCCTGGTCTTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LHEASRWAPGML*LGSGGSSWSLD Trigger: ATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 72 bp | GCACAGACAGCTCCCAGTAGAGCAGGCTTGGTCACTTaGCCCCCAAATGCTCCTCCAGCTCTTTTCATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AQTAPSRAGLVT*PPNAPPALFMW Trigger: CCACATGAAAAGAGCTGGAGGAGCATTTGGGGGCAAAGTGACCAAGCCTGCTCTACTGGGAGCTGTCTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | AGACGGTCCATAAGAATCTGGCAGGCATTCTGTACAGCCTTCCCATaGATATCTGCTCCCATGGAACCCGCAGTGAAGGCGGAGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRSIRIWQAFCTAFP*ISAPMEPAVKAELG Trigger: GCCCAACTCCGCCTTCACTGCGGGTTCCATGGGAGCAGATATCAATGGGAAGGCTGTACAGAATGCCTGCCAGATTCTTATGGACCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | TCCATGAAGCCAGCAGATGGGCACCAGGCATGCTGTTaGTGGGTAGTGGTGGATCTTCCTGGTCTTTGGATT | + |
|
Preference number: 6 (lower is better) Translates to: SMKPADGHQACC*WVVVDLPGLWI Trigger: AATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | CTGATCCGTACAAGCCATGCGAATCACTTCAGGTGTTaGTGGGCTATTCAAGGGGAAGATGTCGCTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LIRTSHANHFRC*WAIQGEDVAQP Trigger: GGGCTGAGCGACATCTTCCCCTTGAATAGCCCAGCAACACCTGAAGTGATTCGCATGGCTTGTACGGATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | CCATTGCCTCCCAATGAGCTGCTTGCAGGTTTGACTTaGAGAGACCACAGTGGGGGCAACACTTCCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PLPPNELLAGLT*RDHSGGNTSKE Trigger: TTCTTTGGAAGTGTTGCCCCCACTGTGGTCTCTGCAAGTCAAACCTGCAAGCAGCTCATTGGGAGGCAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | CCCTGTGGCATGTTTAATACCCGACTGGTGCATGATTaGGTGCCCAACTGGATCTTTCTGGGGTTGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PCGMFNTRLVHD*VPNWIFLGLFG Trigger: CCCAAACAACCCCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | GGAAGATGTCGCTCAGCCCTCTCTCCTTGCGGGCAGTaGTCACGGCATCATATATGGCAAATAAAACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRCRSALSPCGQ*SRHHIWQIKLR Trigger: CCTCAGTTTTATTTGCCATATATGATGCCGTGACCACTGCCCGCAAGGAGAGAGGGCTGAGCGACATCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | CAGTGTCACAGGGATGATCCAGGTGGTCCTCTTCCCTaGGAATGTCAGCCTCCTCTTGTTTGGATCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QCHRDDPGGPLP*ECQPPLVWIFC Trigger: GCAGAAGATCCAAACAAGAGGAGGCTGACATTCCAAGGGAAGAGGACCACCTGGATCATCCCTGTGACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | CTATTCAAGGGGAAGATGTCGCTCAGCCCTCTCTCCTaGCGGGCAGTGGTCACGGCATCATATATGGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LFKGKMSLSPLS*RAVVTASYMAN Trigger: ATTTGCCATATATGATGCCGTGACCACTGCCCGCAAGGAGAGAGGGCTGAGCGACATCTTCCCCTTGAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | TTTTGGGGAGTATTTCAACTCCTCTGTGGTGTAGAATCCCATGCCTaGGATAAAGGCTCCCTCAACCTGCCCGATATCCAGGGCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FWGVFQLLCGVESHA*DKGSLNLPDIQGRV Trigger: AACCCTGCCCTGGATATCGGGCAGGTTGAGGGAGCCTTTATCCAAGGCATGGGATTCTACACCACAGAGGAGTTGAAATACTCCCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 72 bp | TACGACTTGGGGACGTTGAGTTCTCTACTGGCTACCTaGATCATCTTAGTGTGTAGGCCTTGTCCCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: YDLGTLSSLLAT*IILVCRPCPSS Trigger: CGAGCTGGGACAAGGCCTACACACTAAGATGATTCAGGTAGCCAGTAGAGAACTCAACGTCCCCAAGTCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | ATAGCTTCCCCTGTGGCATGTTTAATACCCGACTGGTaGATGATTGGGTGCCCAACTGGATCTTTCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IASPVACLIPDW*MIGCPTGSFWG Trigger: ACCCCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGGGAAGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | GAGTTGGGCACTGTGGTAGTGCTGGTTTCAGAAAAGTaGACGTACGACTTGGGGACGTTGAGTTCTCTACTG | + |
|
Preference number: 6 (lower is better) Translates to: ELGTVVVLVSEK*TYDLGTLSSLL Trigger: CAGTAGAGAACTCAACGTCCCCAAGTCGTACGTGCACTTTTCTGAAACCAGCACTACCACAGTGCCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | TATTCAAGGGGAAGATGTCGCTCAGCCCTCTCTCCTTaGGGGCAGTGGTCACGGCATCATATATGGCAAATA | + |
|
Preference number: 6 (lower is better) Translates to: YSRGRCRSALSP*GQWSRHHIWQI Trigger: TATTTGCCATATATGATGCCGTGACCACTGCCCGCAAGGAGAGAGGGCTGAGCGACATCTTCCCCTTGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | ATGAAGCCAGCAGATGGGCACCAGGCATGCTGTTGCTaGGTAGTGGTGGATCTTCCTGGTCTTTGGATTATA | + |
|
Preference number: 6 (lower is better) Translates to: MKPADGHQACCC*VVVDLPGLWII Trigger: TATAATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCATGCCTGGTGCCCATCTGCTGGCTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | GCAGTGTGTCCTCCTAAAGTAGCCATATTCCTAATCTaGGGCCCTGCAAGTGTCCTCAGATGTTTCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVCPPKVAIFLI*GPASVLRCFWR Trigger: CCTCCAGAAACATCTGAGGACACTTGCAGGGCCCCAGATTAGGAATATGGCTACTTTAGGAGGACACACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | CTCCAGACACTCCTTCCAGCATCTCCGCAAGGGCTCTaGATTAAACGTCTGCTTATAGGCTGTCTTGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LQTLLPASPQGL*IKRLLIGCLAS Trigger: ACTAGCAAGACAGCCTATAAGCAGACGTTTAATCCAGAGCCCTTGCGGAGATGCTGGAAGGAGTGTCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | ATGCTGTTGCTGGGTAGTGGTGGATCTTCCTGGTCTTaGGATTATATCTCGACACCATCACAGTGCAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: MLLLGSGGSSWS*DYISTPSQCRP Trigger: GGGCCTGCACTGTGATGGTGTCGAGATATAATCCAAAGACCAGGAAGATCCACCACTACCCAGCAACAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | ATAAGAATCTGGCAGGCATTCTGTACAGCCTTCCCATaGATATCTGCTCCCATGGAACCCGCAGTGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: IRIWQAFCTAFP*ISAPMEPAVKA Trigger: CGCCTTCACTGCGGGTTCCATGGGAGCAGATATCAATGGGAAGGCTGTACAGAATGCCTGCCAGATTCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | CTTTGCATGGGCCCTGGTACTCGTGACAACGGCAAGGCAGAGTTCTaGGTCAATGGGAGGCATGTCATCAATAAATATAGCTTCCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LCMGPGTRDNGKAEF*VNGRHVINKYSFPC Trigger: ACAGGGGAAGCTATATTTATTGATGACATGCCTCCCATTGACCAAGAACTCTGCCTTGCCGTTGTCACGAGTACCAGGGCCCATGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 72 bp | GGCCCTGCAAGTGTCCTCAGATGTTTCTGGAGGGCGTaGAAGGTTTTGGTCTTCTCCTTTGGTTGTTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GPASVLRCFWRA*KVLVFSFGCSD Trigger: ATCAGAACAACCAAAGGAGAAGACCAAAACCTTTCACGCCCTCCAGAAACATCTGAGGACACTTGCAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 72 bp | AAAGGCATTTTCCTGACGCTGTGCCAACCGGAGTCCTaGCACAAACTGCCACTGAGCAGTGTAAGGAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: KGIFLTLCQPES*HKLPLSSVRNE Trigger: TTCATTCCTTACACTGCTCAGTGGCAGTTTGTGTCAGGACTCCGGTTGGCACAGCGTCAGGAAAATGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | GTAGTCTTCTGGGCCCCGAGAATAGAGCACACCTTTTaGGGAGTATTTCAACTCCTCTGTGGTGTAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VVFWAPRIEHTF*GVFQLLCGVES Trigger: GGATTCTACACCACAGAGGAGTTGAAATACTCCCCAAAAGGTGTGCTCTATTCTCGGGGCCCAGAAGACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | GTATTTCAACTCCTCTGTGGTGTAGAATCCCATGCCTaGGATAAAGGCTCCCTCAACCTGCCCGATATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VFQLLCGVESHA*DKGSLNLPDIQ Trigger: CTGGATATCGGGCAGGTTGAGGGAGCCTTTATCCAAGGCATGGGATTCTACACCACAGAGGAGTTGAAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | AATATAGCTTCCCCTGTGGCATGTTTAATACCCGACTaGTGCATGATTGGGTGCCCAACTGGATCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NIASPVACLIPD*CMIGCPTGSFW Trigger: CCAGAAAGATCCAGTTGGGCACCCAATCATGCACCAGTCGGGTATTAAACATGCCACAGGGGAAGCTATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | GCCCTGGTACTCGTGACAACGGCAAGGCAGAGTTCTTaGTCAATGGGAGGCATGTCATCAATAAATATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVLVTTARQSS*SMGGMSSINIA Trigger: AGCTATATTTATTGATGACATGCCTCCCATTGACCAAGAACTCTGCCTTGCCGTTGTCACGAGTACCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | TGTAGTCTTCTGGGCCCCGAGAATAGAGCACACCTTTaGGGGAGTATTTCAACTCCTCTGTGGTGTAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: CSLLGPENRAHL*GSISTPLWCRI Trigger: GATTCTACACCACAGAGGAGTTGAAATACTCCCCAAAAGGTGTGCTCTATTCTCGGGGCCCAGAAGACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | GAGACCACAGTGGGGGCAACACTTCCAAAGAACATCTTAAGATCCTaGATCGTGTTTGTACCTTCCTCAAACTCCACGCTCATACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ETTVGATLPKNILRS*IVFVPSSNSTLIPA Trigger: TGCTGGTATGAGCGTGGAGTTTGAGGAAGGTACAAACACGATCAAGGATCTTAAGATGTTCTTTGGAAGTGTTGCCCCCACTGTGGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | TGCACGTGGGTTGGAAACTGTGTCCCCAAGTGTAACACCATTTCTTaGTCTTCAGTTTGTGGGATAGCCAGGATGGTTTGCGTTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: CTWVGNCVPKCNTIS*SSVCGIARMVCVSM Trigger: CATGGAAACGCAAACCATCCTGGCTATCCCACAAACTGAAGACAAAGAAATGGTGTTACACTTGGGGACACAGTTTCCAACCCACGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | GGGATGATCCAGGTGGTCCTCTTCCCTTGGAATGTCAGCCTCCTCTaGTTTGGATCTTCTGCCATTCTAATCAGTTCAGGAGGAAATATA | + |
|
Preference number: 6 (lower is better) Translates to: GMIQVVLFPWNVSLL*FGSSAILISSGGNI Trigger: TATATTTCCTCCTGAACTGATTAGAATGGCAGAAGATCCAAACAAGAGGAGGCTGACATTCCAAGGGAAGAGGACCACCTGGATCATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 72 bp | GGCAACTTCTCCAGGAAAGGGCCATTTAAAGGGAGCTaGCGATCTTTTCCTTCTCTAGATACCACGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GNFSRKGPFKGS*RSFPSLDTTLM Trigger: CATCAACGTGGTATCTAGAGAAGGAAAAGATCGTCAGCTCCCTTTAAATGGCCCTTTCCTGGAGAAGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | AGACTTCTGGGAGAATGTTTTCCCGCTTTCTACAATTaGTCGATATCCAGTGCATCGGCACAAATTCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLLGECFPAFYN*SISSASAQIPS Trigger: GGAGGGAATTTGTGCCGATGCACTGGATATCGACCAATTGTAGAAAGCGGGAAAACATTCTCCCAGAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | TTCATGAACCCAATTTTGTATTTTCCCAGGAGTGGGTaGCGGCCAGCTGTTATCAGCATGTCATCACTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: FMNPILYFPRSG*RPAVISMSSLR Trigger: ACGAAGTGATGACATGCTGATAACAGCTGGCCGCCACCCACTCCTGGGAAAATACAAAATTGGGTTCATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | ACACTTCTCATCTGGATCCATGCAGCATTTCCCAGATCCCTTCATTaGGCAAACAGTAGACTTCTGGGAGAATGTTTTCCCGCTTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TLLIWIHAAFPRSLH*ANSRLLGECFPAFY Trigger: GTAGAAAGCGGGAAAACATTCTCCCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGGAAATGCTGCATGGATCCAGATGAGAAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 90 bp | TCCTTGGGACATTTAATGCTGCAGACACAAATTCCTGCACGTGGGTaGGAAACTGTGTCCCCAAGTGTAACACCATTTCTTTGTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SLGHLMLQTQIPARG*ETVSPSVTPFLCLQ Trigger: CTGAAGACAAAGAAATGGTGTTACACTTGGGGACACAGTTTCCAACCCACGTGCAGGAATTTGTGTCTGCAGCATTAAATGTCCCAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS TCA 72 bp | GTTGAAGGGTCATCTCTGGGAATCATCTCAGTAAACTaGTCCGTACAAGCCATGCGAATCACTTCAGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VEGSSLGIISVN*SVQAMRITSGV Trigger: AACACCTGAAGTGATTCGCATGGCTTGTACGGATCAGTTTACTGAGATGATTCCCAGAGATGACCCTTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | ATCCAAGGTATCTTTAAGCTGTGCCAGGCTGTATCCTaGTCCTATTGTTACCCCATTGTTTGTGGTGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IQGIFKLCQAVS*SYCYPIVCGVH Trigger: ATGGACACCACAAACAATGGGGTAACAATAGGAGCAGGATACAGCCTGGCACAGCTTAAAGATACCTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | ATCTGGATCCATGCAGCATTTCCCAGATCCCTTCATTaGGCAAACAGTAGACTTCTGGGAGAATGTTTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IWIHAAFPRSLH*ANSRLLGECFP Trigger: GGGAAAACATTCTCCCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGGAAATGCTGCATGGATCCAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | TTCTTTGTCTTCAGTTTGTGGGATAGCCAGGATGGTTaGCGTTTCCATGTAAAAGTGTTCCTGCCCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: FFVFSLWDSQDG*RFHVKVFLPFH Trigger: GTGGAAGGGCAGGAACACTTTTACATGGAAACGCAAACCATCCTGGCTATCCCACAAACTGAAGACAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CAA 72 bp | GTTGGAAACTGTGTCCCCAAGTGTAACACCATTTCTTaGTCTTCAGTTTGTGGGATAGCCAGGATGGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VGNCVPKCNTIS*SSVCGIARMVC Trigger: GCAAACCATCCTGGCTATCCCACAAACTGAAGACAAAGAAATGGTGTTACACTTGGGGACACAGTTTCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 72 bp | TTGCAAGCCCTGCCCCGGCACCGGAAATTCGGAATATaGTATGTATTTTCAGATTTCAGCACGACAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQALPRHRKFGI*YVFSDFSTTNS Trigger: AGAATTTGTCGTGCTGAAATCTGAAAATACATATCATATTCCGAATTTCCGGTGCCGGGGCAGGGCTTGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS GCA 72 bp | GCAGATGATCTGACCCACGCAAATGACCTCACTCTGTaGATAAAGAATCTCTCCATTGTGATCATTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ADDLTHANDLTL*IKNLSIVIIFS Trigger: GGAGAAAATGATCACAATGGAGAGATTCTTTATGCACAGAGTGAGGTCATTTGCGTGGGTCAGATCATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | TTCCCAGATCCCTTCATTTGGCAAACAGTAGACTTCTaGGAGAATGTTTTCCCGCTTTCTACAATTGGTCGA | + |
|
Preference number: 6 (lower is better) Translates to: FPDPFIWQTVDF*ENVFPLSTIGR Trigger: TCGACCAATTGTAGAAAGCGGGAAAACATTCTCCCAGAAGTCTACTGTTTGCCAAATGAAGGGATCTGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | GCCATTCTAATCAGTTCAGGAGGAAATATAGGTTCCTaGGATGGGTCAAACGGCTGGAACTCATCTTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: AILISSGGNIGS*DGSNGWNSSSL Trigger: TAATGAAGATGAGTTCCAGCCGTTTGACCCATCCCAGGAACCTATATTTCCTCCTGAACTGATTAGAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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| CDS CCA 72 bp | GTGTCCTCAGATGTTTCTGGAGGGCGTGAAAGGTTTTaGTCTTCTCCTTTGGTTGTTCTGATACCAGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSSDVSGGRERF*SSPLVVLIPEN Trigger: ATTTTCTGGTATCAGAACAACCAAAGGAGAAGACCAAAACCTTTCACGCCCTCCAGAAACATCTGAGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | ATTTCGAGAATGCACCAGAGTGACATAGAACTCCTCTaGTATCTCAGTGATGGTGGGGATTTTGTAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISRMHQSDIELL*YLSDGGDFVVF Trigger: GAAGACTACAAAATCCCCACCATCACTGAGATACCAGAGGAGTTCTATGTCACTCTGGTGCATTCTCGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CAA 72 bp | CATTTAATGCTGCAGACACAAATTCCTGCACGTGGGTaGGAAACTGTGTCCCCAAGTGTAACACCATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: HLMLQTQIPARG*ETVSPSVTPFL Trigger: AAGAAATGGTGTTACACTTGGGGACACAGTTTCCAACCCACGTGCAGGAATTTGTGTCTGCAGCATTAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 72 bp | GGCGTGAAAGGTTTTGGTCTTCTCCTTTGGTTGTTCTaGTACCAGAAAATCCAAGGTATCTTTAAGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GVKGFGLLLWLF*YQKIQGIFKLC Trigger: GCACAGCTTAAAGATACCTTGGATTTTCTGGTATCAGAACAACCAAAGGAGAAGACCAAAACCTTTCACGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS GCA 72 bp | TTCTCTAGATACCACGTTGATGGTAGCATTTCCAGCTaGCAAAATAGGGTTGAGGTCAGAAAAATTAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: FSRYHVDGSISS*QNRVEVRKIRT Trigger: CGTCCTAATTTTTCTGACCTCAACCCTATTTTGGCAGCTGGAAATGCTACCATCAACGTGGTATCTAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | GGAGGAAATATAGGTTCCTGGGATGGGTCAAACGGCTaGAACTCATCTTCATTATACAGTTTAGTACACATC | + |
|
Preference number: 6 (lower is better) Translates to: GGNIGSWDGSNG*NSSSLYSLVHI Trigger: GATGTGTACTAAACTGTATAATGAAGATGAGTTCCAGCCGTTTGACCCATCCCAGGAACCTATATTTCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS CCA 72 bp | TCTAATCAGTTCAGGAGGAAATATAGGTTCCTGGGATaGGTCAAACGGCTGGAACTCATCTTCATTATACAG | + |
|
Preference number: 6 (lower is better) Translates to: SNQFRRKYRFLG*VKRLELIFIIQ Trigger: CTGTATAATGAAGATGAGTTCCAGCCGTTTGACCCATCCCAGGAACCTATATTTCCTCCTGAACTGATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
||
| CDS TCA 72 bp | CATGTTTGTCTGGTAGCCTTTGAAATATCCAGTGGCTaGGAGGCTGATGGATTCTTCAAAGGCCATTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: HVCLVAFEISSG*EADGFFKGHFN Trigger: ATTAAAATGGCCTTTGAAGAATCCATCAGCCTCTCAGCCACTGGATATTTCAAAGGCTACCAGACAAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040442.6 |
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