Pregenerated sensors for AOX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000064294Ensembl transcript IDs: ENSMUST00000040999.14, ENSMUST00000162011.3
Found 202 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGGGCATCTCAGTGCCTTGCATCAGTGTGGAGTAGCTGGCTACTaGGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTAGTC | + |
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Preference number: 1 (lower is better) Translates to: MGHLSALHQCGVAGY*DRQLRPALVCLLLV Trigger: GACTAGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCTACTCCACACTGATGCAAGGCACTGAGATGCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR CCA 90 bp | CAGGAACCGGCCCTCAGGAACAAACAGTTTGCATTTTCTGCATCCTaGGTTTCTAGCTTGGGGCCTGACAGTTGGGACTCTGCTAACAGA | + |
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Preference number: 1 (lower is better) Translates to: QEPALRNKQFAFSAS*VSSLGPDSWDSANR Trigger: TCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTTGTTCCTGAGGGCCGGTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR CCA 90 bp | TCAGGAACAAACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTaGGGCCTGACAGTTGGGACTCTGCTAACAGAAGCTTCTGAAACA | + |
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Preference number: 1 (lower is better) Translates to: SGTNSLHFLHPGFLA*GLTVGTLLTEASET Trigger: TGTTTCAGAAGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTTGTTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR TCA 90 bp | CAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATATTaGATTAAACATGACCTTTGGCTGAAGCTCCGTAAACATCGTTGC | + |
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Preference number: 1 (lower is better) Translates to: QHRNSSHSGKFRLIY*IKHDLWLKLRKHRC Trigger: GCAACGATGTTTACGGAGCTTCAGCCAAAGGTCATGTTTAATTCAATATATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| 3UTR-3UTR TCA 90 bp | AATGGGGCATCTCAGTGCCTTGCATCAGTGTGGAGTAGCTGGCTACTGAGACAGCCTGGATCTAGACAATaGGAAAGAGCAAGGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: NGASQCLASVWSSWLLRQPGSRQ*ERARTR Trigger: TCTTGTCCTTGCTCTTTCTCATTGTCTAGATCCAGG...CTGTCTCAGTAGCCAGCTACTCCACACTGATGCAAGGCACTGAGATGCCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR-3UTR GCA 90 bp | AACAAACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTGGGGCCTGACAGTCAGACAGCTCAGACCTaGTCTTGTCTGTCTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: NKQFAFSASWVSSLGPDSQTAQT*SCLSTP Trigger: AGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTG...ACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTGCAGGAGAAGATCCCGCTCCTAGTCTTATCCTaGATTTTCTATGGATCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AYNQSSKEASTLLQEKIPLLVLS*IFYGSS Trigger: TGAGGATCCATAGAAAATTCAGGATAAGACTAGGAG...CGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTAGTCTTATCCTGAATTTTCTATaGATCCTCATAAGCATTGAG | + |
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Preference number: 2 (lower is better) Translates to: WLLRQTAQTCSCLSTPSLILNFL*ILISIE Trigger: CTCAATGCTTATGAGGATCCATAGAAAATTCAGGAT...AAGACTAGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR TCA 72 bp | CTCAGTGCCTTGCATCAGTGTGGAGTAGCTGGCTACTaGGACAGACAGCTCAGACCTGCTCTTGTCTGTCTA | + |
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Preference number: 3 (lower is better) Translates to: LSALHQCGVAGY*DRQLRPALVCL Trigger: TAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCTACTCCACACTGATGCAAGGCACTGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR GCA 72 bp | CTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTaGAGGAGAAGATCCCGAGGGGGACACTGTCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LTIKAAKRQAHY*RRRSRGGHCQS Trigger: GCTTTGACAGTGTCCCCCTCGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR CCA 72 bp | AACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTaGGGCCTGACAGTTGGGACTCTGCTAACAGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: NSLHFLHPGFLA*GLTVGTLLTEA Trigger: AGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR TCA 72 bp | GGGCCTGACAGTTGGGACTCTGCTAACAGAAGCTTCTaGAACAAGTACAAAGGAGTCCAAAGGATACCTAGA | + |
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Preference number: 3 (lower is better) Translates to: GPDSWDSANRSF*NKYKGVQRIPR Trigger: TCTAGGTATCCTTTGGACTCCTTTGTACTTGTTTCAGAAGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR TCA 72 bp | TCTTATCCTGAATTTTCTATGGATCCTCATAAGCATTaGGTTCCAGAACACGTGTGCCCTGGATCTAGACAA | + |
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Preference number: 3 (lower is better) Translates to: SYPEFSMDPHKH*VPEHVCPGSRQ Trigger: TTGTCTAGATCCAGGGCACACGTGTTCTGGAACTCAATGCTTATGAGGATCCATAGAAAATTCAGGATAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | CCGAGGGGGACACTGTCAAAGCAGGAACCGGCCCTCAGGAACAAACAGTTTGCAGTGACAGCAGCCCCATaGAGAGAGCAGATGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: PRGTLSKQEPALRNKQFAVTAAP*REQMGT Trigger: GGTTCCCATCTGCTCTCTCCATGGGGCTGCTGTCAC...TGCAAACTGTTTGTTCCTGAGGGCCGGTTCCTGCTTTGACAGTGTCCCCCTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTTTCTAGCTTGGGGCCTGACAGTTGGGACTCTGCTAACAGAAGCTTCTGGGCCTGTATCCAGTaGAGCGGCATAGATTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: SWVSSLGPDSWDSANRSFWACIQ*SGIDSR Trigger: GCGGGAATCTATGCCGCTGCACTGGATACAGGCCCA...GAAGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTCATGGAGAGAGCAGATaGGAACCAGGCAGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SSWLLRQTAQTCSCLSTPHGESR*EPGRQW Trigger: CCACTGCCTGCCTGGTTCCCATCTGCTCTCTCCATG...AGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCTACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR GCA 90 bp | AGCTGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTAGTTTGAGATCATCACTGTaGAGGCGCCACAGTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: SWLLRQTAQTCSCLSTPSLRSSL*RRHSHL Trigger: GAGGTGACTGTGGCGCCTGCACAGTGATGATCTCAA...ACTAGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | CAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTGGGGCCTGACAGTTGGGACCCACACTGGGTACCATaGCCTTTGGCAATCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QFAFSASWVSSLGPDSWDPHWVP*PLAILS Trigger: GGAAAGGATTGCCAAAGGCCATGGTACCCAGTGTGG...GTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | GCTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTGCAGGAGAAGATCCCGGTGCAGAACCCACACTaGGTACCATGGCCTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: AYNQSSKEASTLLQEKIPVQNPH*VPWPLA Trigger: TGCCAAAGGCCATGGTACCCAGTGTGGGTTCTGCAC...CGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | GCTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTGCAGGAGAAGATCCCGTCGCACTCTCCACAATaGGCCTGTATCCAGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: AYNQSSKEASTLLQEKIPSHSPQ*ACIQCS Trigger: GCTGCACTGGATACAGGCCCATTGTGGAGAGTGCGA...CGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTCCTTCCCCATTCATCTaGCAGCAAGTTGAACTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SSWLLRQTAQTCSCLSTPPSPFI*QQVELG Trigger: CCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGG...AGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR TCA 90 bp | CCGAGGGGGACACTGTCAAAGCAGGAACCGGCCCTCAGGAACAAACAGTTTGCACTACATAGTACAAAGTaGCCCAGAGGAGCAGATAAA | + |
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Preference number: 4 (lower is better) Translates to: PRGTLSKQEPALRNKQFALHSTK*PRGADK Trigger: TTTATCTGCTCCTCTGGGTCACTTTGTACTATGTAG...TGCAAACTGTTTGTTCCTGAGGGCCGGTTCCTGCTTTGACAGTGTCCCCCTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR GCA 90 bp | CAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTGGGGCCTGACAGTTGGGACTCAGGAGAGTATAGATaGTCATCACCATCCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QFAFSASWVSSLGPDSWDSGEYR*SSPSRE Trigger: CTCCCGGGATGGTGATGAGCATCTATACTCTCCTGA...GTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | AGTAGCTGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTCAACTGAGGACAAGCTaGTGGATGTGTCCCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SSWLLRQTAQTCSCLSTPQLRTS*WMCPFS Trigger: AGAGAAGGGACACATCCACCAGCTTGTCCTCAGTTG...AGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR TCA 90 bp | GCTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTGCAGGAGAAGATCCCGTGGCAGAGAAATGACTaGTCCTTTTGGAGATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: AYNQSSKEASTLLQEKIPWQRND*SFWRWG Trigger: ACCCCATCTCCAAAAGGATCAGTCATTTCTCTGCCA...CGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGTCAGGCTGAGGCCTaGGCCCAGTGTCAGCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGQAEA*AQCQPL Trigger: CAAGGGCTGACACTGGGCGCAGGCCTCAGCCTGACC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | AACAAACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTGGGGCCTGACAGTCCATTATCTGTTCTGTaGAGGGCTCTGGGTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: NKQFAFSASWVSSLGPDSPLSVL*RALGGS Trigger: GGAACCACCCAGAGCCCTCCACAGAACAGATAATGG...ACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | TCCTGGGTTTCTAGCTTGGGGCCTGACAGTTGGGACTCTGCTAACAGAAGCTTCTATAAGCTCCTGAGTTaGATCCAAGGGCTGAAATTC | + |
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Preference number: 4 (lower is better) Translates to: SWVSSLGPDSWDSANRSFYKLLS*IQGLKF Trigger: GAATTTCAGCCCTTGGATCCAACTCAGGAGCTTATA...GAAGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| 3UTR CAA 72 bp | AAACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTaGGGGCCTGACAGTTGGGACTCTGCTAACAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: KQFAFSASWVSS*GPDSWDSANRS Trigger: GCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGGAGGCCACATTCCTaGTCTGCTGCCCAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRRPHS*SAAQPG Trigger: CCCTGGCTGGGCAGCAGATCAGGAATGTGGCCTCCT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TGGCTACTGAGACAGACAGCTCAGACCTGCTCTTGTCTGTCTACTCCTAGTCTTGTATCCTGGTTTTGGTaGTTCCTATGCCTTCTACTG | + |
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Preference number: 4 (lower is better) Translates to: WLLRQTAQTCSCLSTPSLVSWFW*FLCLLL Trigger: CAGTAGAAGGCATAGGAAGCACCAAAACCAGGATAC...AAGACTAGGAGTAGACAGACAAGAGCAGGTCTGAGCTGTCTGTCTCAGTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR TCA 90 bp | AACAAACAGTTTGCATTTTCTGCATCCTGGGTTTCTAGCTTGGGGCCTGACAGTGCAGTGGCAGAGAAATaGCTGATCCTTTTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: NKQFAFSASWVSSLGPDSAVAEK*LILLEM Trigger: CATCTCCAAAAGGATCAGTCATTTCTCTGCCACTGC...ACTGTCAGGCCCCAAGCTAGAAACCCAGGATGCAGAAAATGCAAACTGTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCATCCCTCCAGGGGCTaGCATCAGGAGGGAGACTTC | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNHPSRG*HQEGDF Trigger: GAAGTCTCCCTCCTGATGGCAGCCCCTGGAGGGATG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | CCATCAATGGCTATGACCCGCATAACAAAAACTCTTTGGGTTGTCAGCAATTTCCTGAGGACAAGCTGGTaGATGTGTCCCTTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: PSMAMTRITKTLWVVSNFLRTSW*MCPFSC Trigger: GCAAGAGAAGGGACACATCCACCAGCTTGTCCTCAG...GAAATTGCTGACAACCCAAAGAGTTTTTGTTATGCGGGTCATAGCCATTGATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGACGAGGGGCCTGTCTaGAGGCTGATACAAACTCCC | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNDEGPV*RLIQTP Trigger: GGGAGTTTGTATCAGCCTTCAGACAGGCCCCTCGTC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCAAACGCGTTTTGCTaGCGAGGGGCCTGTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNANAFC*RGACLK Trigger: CTTCAGACAGGCCCCTCGTCAGCAAAACGCGTTTGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCACCATCCCGGGAGTaGAGAACCCACACTGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSPSRE*RTHTGY Trigger: GTACCCAGTGTGGGTTCTGCACTCCCGGGATGGTGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGGGCCTGTATCCAGTaGAGCGGCATAGATTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNWACIQ*SGIDSR Trigger: GCGGGAATCTATGCCGCTGCACTGGATACAGGCCCA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCATGGAGAGAGCAGATaGGAACCAGGCAGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNHGESR*EPGRQW Trigger: CCACTGCCTGCCTGGTTCCCATCTGCTCTCTCCATG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTGACAGCAGCCCCATaGAGAGAGCAGATGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVTAAP*REQMGT Trigger: GGTTCCCATCTGCTCTCTCCATGGGGCTGCTGTCAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAAGACGTTCTTCACCTaGGTCAGGCTGAGGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNKTFFT*VRLRPA Trigger: CGCAGGCCTCAGCCTGACCCAGGTGAAGAACGTCTT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATACCAGGTTCGTGAACTaGTCCTCACAGGCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNTRFVN*SSQAMR Trigger: CCGCATGGCCTGTGAGGACCAGTTCACGAACCTGGT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCTGCTGGTTACCACTaGCAAGAAGAGTTCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNAAGYH*QEEFPR Trigger: CCTGGGGAACTCTTCTTGGCAGTGGTAACCAGCAGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTGGGATGCCCAAGGTaGGAGCCACCATTTCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLGCPR*EPPFPV Trigger: CACAGGAAATGGTGGCTCGCACCTTGGGCATCCCAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | GCTTACAATCAAAGCAGCAAAGAGGCAAGCACACTACTGCAGGAGAAGATCCCGATGTGTCCCTTCTCTTaGAAGCATCATAAAACCAAA | + |
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Preference number: 4 (lower is better) Translates to: AYNQSSKEASTLLQEKIPMCPFS*KHHKTK Trigger: TTTGGTTTTATGATGCTTGCAAGAGAAGGGACACAT...CGGGATCTTCTCCTGCAGTAGTGTGCTTGCCTCTTTGCTGCTTTGATTGTAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTGCAGAACCCACACTaGGTACCATGGCCTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVQNPH*VPWPLA Trigger: TGCCAAAGGCCATGGTACCCAGTGTGGGTTCTGCAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCGCACTCTCCACAATaGGCCTGTATCCAGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSHSPQ*ACIQCS Trigger: GCTGCACTGGATACAGGCCCATTGTGGAGAGTGCGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTCCCGAGTAGTGGGTaGCGTCCTCCAGTTATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNFPSSG*RPPVIN Trigger: GTTGATAACTGGAGGACGTCACCCACTACTCGGGAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTGAGATCATCACTGTaGAGGCGCCACAGTCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLRSSL*RRHSHL Trigger: GAGGTGACTGTGGCGCCTGCACAGTGATGATCTCAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCTCTGGCTTCAGGATTaGATCTGGAACTCCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLWLQD*IWNSSE Trigger: CTCGCTGGAGTTCCAGATGCAATCCTGAAGCCAGAG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCGTCCGATTGGGTCTTaGAGAGGCTGTTGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRPIGS*RGCWKS Trigger: AGACTTCCAACAGCCTCTGCAAGACCCAATCGGACG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCCTATTCTTTGGGATaGCCAAGGTGCGAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSYSLG*PRCEPP Trigger: TGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCACACTGGGTACCATaGCCTTTGGCAATCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPHWVP*PLAILS Trigger: GGAAAGGATTGCCAAAGGCCATGGTACCCAGTGTGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCATTATCTGTTCTGTaGAGGGCTCTGGGTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPLSVL*RALGGS Trigger: GGAACCACCCAGAGCCCTCCACAGAACAGATAATGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCTTCCCCATTCATCTaGCAGCAAGTTGAACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPSPFI*QQVELG Trigger: CCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGGCAGGGCTGTTTATaGCCCAAATTGGGGACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNWQGCL*PKLGTS Trigger: GCTTGTCCCCAATTTGGGCCATAAACAGCCCTGCCA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCACAAAAACGGAGATaGGCACTTGCTCTGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNAQKRR*ALALAS Trigger: TGAAGCCAGAGCAAGTGCTCATCTCCGTTTTTGTGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGCAGCATCCTGGCTTaGCACATAGATGTCCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNCSILA*HIDVHL Trigger: GAGATGGACATCTATGTGTCAAGCCAGGATGCTGCA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCAGGAGAGTATAGATaGTCATCACCATCCCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSGEYR*SSPSRE Trigger: CTCCCGGGATGGTGATGAGCATCTATACTCTCCTGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGCTTTCCTCTTCTCTaGCATTGTCACCAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGFPLL*HCHQAH Trigger: ATGTGCCTGGTGACAATGGCAGAGAAGAGGAAAGCC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATGTCAGGGTACTTGTaGGGGTCCCTCGTCTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNMSGYL*GSLVFN Trigger: GTTAAAGACGAGGGACCCCCACAAGTACCCTGACAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAATGCCCCTTCAATCTaGCCTATGTCCACAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNNAPSI*PMSTAG Trigger: TCCTGCTGTGGACATAGGCCAGATTGAAGGGGCATT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTTTATGGCCCAAATTaGGGACAAGCCTCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVYGPN*GQASLL Trigger: GAGGAGAGAGGCTTGTCCCCAATTTGGGCCATAAAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | CCATCAATGGCTATGACCCGCATAACAAAAACTCTTTGGGTTGTCAGCAATTTCAACCATCAGCTCAGGTaGAAATATAAGCTCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSMAMTRITKTLWVVSNFNHQLR*KYKLLS Trigger: ACTCAGGAGCTTATATTTCCACCTGAGCTGATGGTT...GAAATTGCTGACAACCCAAAGAGTTTTTGTTATGCGGGTCATAGCCATTGATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGGCAGAGAAATGACTaGTCCTTTTGGAGATGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNWQRND*SFWRWG Trigger: ACCCCATCTCCAAAAGGATCAGTCATTTCTCTGCCA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCAGTGGCAGAGAAATaGCTGATCCTTTTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNAVAEK*LILLEM Trigger: CATCTCCAAAAGGATCAGTCATTTCTCTGCCACTGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCATCTGGCAGCAAGTTaGACTCGGGCAGAAACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNHLAAS*TRAETF Trigger: AAAAGTTTCTGCCCGAGTTCAACTTGCTGCCAGATG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGTTCAACACCACCATaGGCAACTAGTACAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSSTPP*ATSTDP Trigger: TGGGTCTGTACTAGTTGCTCATGGTGGTGTTGAACT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGTGGAGCGCTGGGATaGTTCATTTTCAGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSGALG*FIFSSR Trigger: TCTGGAACTGAAAATGAAGCATCCCAGCGCTCCACT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTATTGCAGTGCATCCTaGACTGTCACAATCATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNYCSAS*TVTIMG Trigger: GCCCATGATTGTGACAGTGCAGGATGCACTGCAATA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGTTTCTGTTACAAATaGCCCCTGGGGAAAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGFCYK*PLGKAK Trigger: TTTGGCTTTCCCCAGGGGGCATTTGTAACAGAAACC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCTCGGACACGGAGGTTaGGGATCTTGTAAGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLGHGG*GSCKHF Trigger: AAAATGCTTACAAGATCCCCAACCTCCGTGTCCGAG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGTCTACTGATAATATaGCCACCTAAGGAGGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSLLII*PPKEAT Trigger: TGTGGCCTCCTTAGGTGGTCATATTATCAGTAGACT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTCTACATCCTGAAATaGCTGCATCCCATAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVYILK*LHPIRH Trigger: ATGCCTTATGGGATGCAGTCATTTCAGGATGTAGAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGATGATTTTAGCATGTaGCTTGCTGCTGGTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNDDFSM*LAAGYH Trigger: GTGGTAACCAGCAGCAAGTCACATGCTAAAATCATC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTACAGTCCAAGACCTTaGACAAATGCCCCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNYSPRP*TNAPSI Trigger: GATTGAAGGGGCATTTGTTCAAGGTCTTGGACTGTA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGGGATGTCGGTAACTaGTGCTATTTTGTACTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNWDVGN*CYFVLV Trigger: CACCAGTACAAAATAGCATCAGTTACCGACATCCCA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGTTGGTGTCAACAGTaGTACATGGAATTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGWCQQ*YMEFFW Trigger: CCAGAAGAATTCCATGTATCACTGTTGACACCAACC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTATCCTGGTTTTGGTaGTTCCTATGCCTTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVSWFW*FLCLLL Trigger: CAGTAGAAGGCATAGGAAGCACCAAAACCAGGATAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGAGCACAGTATATCTaGGTCTTCTCCTTAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRAQYI*VFSLGS Trigger: ACTCCCTAAGGAGAAGACGCAGATATACTGTGCTCT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATACAAACTCCCACTTaGTGGAGCGTGGCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNIQTPT*WSVAQK Trigger: TTTTTGTGCCACGCTCCAGCAAGTGGGAGTTTGTAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTACCACTAGGATTCTaGTTGATGATGGGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVPLGF*LMMGSR Trigger: TCTGGAACCCATCATCAAGCAGAATCCTAGTGGTAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGTGTATCCTGGTTTTaGTGCTTCCTATGCCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGVSWF*CFLCLL Trigger: TAGAAGGCATAGGAAGCACCAAAACCAGGATACACC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCTCATCAGCTCAGGTaGAAATATAAGCTCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPHQLR*KYKLLS Trigger: ACTCAGGAGCTTATATTTCCACCTGAGCTGATGAGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGAGTAGATGGCTTTTaGGTTTGGGGTTGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRVDGF*VWGWCQ Trigger: TTGACACCAACCCCAAACCCAAAAGCCATCTACTCT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTGTTTGTGTCCTCCTTaGAAACGACTTTCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNCLCPP*KRLSFQ Trigger: CTGGAATGAAAGTCGTTTTCAAGGAGGACACAAACA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTTTCACATGGCAGTTaGTCCTATTCTTTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNFSHGS*SYSLGC Trigger: GCATCCCAAAGAATAGGATCAACTGCCATGTGAAAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGAGAGGCTAATGCTTTaGACAAAAGCTTCCTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNERLML*TKASLT Trigger: GGTTAAGGAAGCTTTTGTTCAAAGCATTAGCCTCTC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATCATCACAAAATACTaGCTCTCCTGTGGCGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNIITKY*LSCGVF Trigger: AAACACGCCACAGGAGAGGCAGTATTTTGTGATGAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATAAAGCTGGATGTCTaGCGCCTTGATTTTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNIKLDV*RLDFPI Trigger: AATGGGAAAATCAAGGCGGCAGACATCCAGCTTTAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAAGACCTTGAACAAATaGCCCTTCAATCTGGCCTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNKTLNK*PFNLAY Trigger: ATAGGCCAGATTGAAGGGGCATTTGTTCAAGGTCTT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTATAAGCTCCTGAGTTaGATCCAAGGGCTGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNYKLLS*IQGLKF Trigger: GAATTTCAGCCCTTGGATCCAACTCAGGAGCTTATA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR GCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATCGGCACATTGAAATaGTTCCTCAACATTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNIGTLK*FLNISL Trigger: CAAGGAAATGTTGAGGAAGCATTTCAATGTGCCGAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCAACCCTTTTCACATaGCAGTTGATCCTATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPTLFT*QLILFF Trigger: AAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTCTTTCAGGTCCAATaGATGATTCATATTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNFFQVQ*MIHIAV Trigger: CACTGCAATATGAATCATTCATTGGACCTGAAAGAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR TCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTTTCCCATTGTTCATaGAGCCAATCTTGTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNFSHCS*SQSCIS Trigger: GGAAATACAAGATTGGCTTCATGAACAATGGGAAAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTTCCAAAATCTCTGTTaGTTAAATTCATCCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNFQNLC*LNSSTA Trigger: AGCTGTGGATGAATTTAACCAACAGAGATTTTGGAA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 90 bp | CTGTGCGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTTGCTTaGTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCGYSCHGCQEPRLA*FPSEGSTNPFHMAV Trigger: AACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 90 bp | TCTTCTGTGCGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTTaGTTGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSVRLQLPRMPGAQA*LLSLRRLHQPFSHG Trigger: GCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGCACAGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 90 bp | GCTGTTTATGGCCCAAATTGGGGACAAGCCTCTCTCCTCTCGAGCTaGAGCCACGGCCGCGGCAATAGCGAAGAACACAGAACAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVYGPNWGQASLLSS*SHGRGNSEEHRTAQ Trigger: CTGGGCTGTTCTGTGTTCTTCGCTATTGCCGCGGCCGTGGCTGCAGCTCGAGAGGAGAGAGGCTTGTCCCCAATTTGGGCCATAAACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 90 bp | ACAGGCATTCTGAACAGCTCTCCCGTTGACATCGGCACCGGTGGATaGTCCAGTGGTAACCGTGTTGGGGACGGTCACAGTGCTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGILNSSPVDIGTGG*SSGNRVGDGHSAHL Trigger: GAGATGAGCACTGTGACCGTCCCCAACACGGTTACCACTGGAGCATCCACCGGTGCCGATGTCAACGGGAGAGCTGTTCAGAATGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 90 bp | AACCAGGTTCGTGAACTGGTCCTCACAGGCCATGCGGATCACTTCTaGTGTGGCAGGGCTGTTTATGGCCCAAATTGGGGACAAGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NQVRELVLTGHADHF*CGRAVYGPNWGQAS Trigger: AGAGGCTTGTCCCCAATTTGGGCCATAAACAGCCCTGCCACAGCAGAAGTGATCCGCATGGCCTGTGAGGACCAGTTCACGAACCTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CCA 90 bp | GGCTTGCTTGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATaGCAGTTGATCCTATTCTTTGGGATGCCCAAGGTGCGAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GLLAFPPKAPPTLFT*QLILFFGMPKVRAT Trigger: GGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CCA 90 bp | GGCTTACAGCATTTAGAATCCGTTTGTGGAACCAGGTTCGTGAACTaGTCCTCACAGGCCATGCGGATCACTTCTGCTGTGGCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLQHLESVCGTRFVN*SSQAMRITSAVAGL Trigger: CAGCCCTGCCACAGCAGAAGTGATCCGCATGGCCTGTGAGGACCAGTTCACGAACCTGGTTCCACAAACGGATTCTAAATGCTGTAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | CCGAGGGGGACACTGTCAAAGCAGGAACCGGCCCTCAGGAACAAACAGTTTGCAAGATGGGGTCGTATCTaGAGATCATCACTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRGTLSKQEPALRNKQFARWGRI*RSSLCR Trigger: CCTGCACAGTGATGATCTCAAGATACGACCCCATCT...TGCAAACTGTTTGTTCCTGAGGGCCGGTTCCTGCTTTGACAGTGTCCCCCTCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
||
| CDS TCA 90 bp | CCCAAAATAGGGTTGAGGTCAGAGGTCGGCAGTCTACTGATAATATaGCCACCTAAGGAGGCCACATTCCTGATCTGCTGCCCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKIGLRSEVGSLLII*PPKEATFLICCPAR Trigger: CCTGGCTGGGCAGCAGATCAGGAATGTGGCCTCCTTAGGTGGTCATATTATCAGTAGACTGCCGACCTCTGACCTCAACCCTATTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 90 bp | ACTGATGGCAAGAGTCTTTCGGTATTCCTCCATCCCTCCAGGGGCTaGCATCAGGAGGGAGACTTCCTCACAAATCATCTTGCCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TDGKSLSVFLHPSRG*HQEGDFLTNHLASI Trigger: GATGCTGGCAAGATGATTTGTGAGGAAGTCTCCCTCCTGATGGCAGCCCCTGGAGGGATGGAGGAATACCGAAAGACTCTTGCCATCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 90 bp | TGCAGCGGCATAGATTCCCGCCCAGGGTTTCCATTATCTGTTCTGTaGAGGGCTCTGGGTGGTTCCTCAGGAGAGTATAGATGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: CSGIDSRPGFPLSVL*RALGGSSGEYRCSS Trigger: TGATGAGCATCTATACTCTCCTGAGGAACCACCCAGAGCCCTCCACAGAACAGATAATGGAAACCCTGGGCGGGAATCTATGCCGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
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| CDS TCA 90 bp | GTCACCAGGCACATCTCGAGCTGTTACCACATCAACCACACCAAGTaGCGCCAAGGCCTCGGAGGCATCAAGAGAGATGATTTTAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: VTRHISSCYHINHTK*RQGLGGIKRDDFSM Trigger: CATGCTAAAATCATCTCTCTTGATGCCTCCGAGGCCTTGGCGTCACTTGGTGTGGTTGATGTGGTAACAGCTCGAGATGTGCCTGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 90 bp | CAAGGTGCGAGCCACCATTTCCTGTGTAAATGCAGCATCCTGGCTTaGCACATAGATGTCCATCTCCTTATCCTCTCCCTTGGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: QGASHHFLCKCSILA*HIDVHLLILSLGDH Trigger: GTGGTCCCCAAGGGAGAGGATAAGGAGATGGACATCTATGTGTCAAGCCAGGATGCTGCATTTACACAGGAAATGGTGGCTCGCACCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS TCA 90 bp | TTGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGGCAGTTaGTCCTATTCTTTGGGATGCCCAAGGTGCGAGCCACCATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLRRLHQPFSHGS*SYSLGCPRCEPPFP Trigger: AGGAAATGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TCCTGGGTTTCTAGCTTGGGGCCTGACAGTTGGGACTCTGCTAACAGAAGCTTCGGGTGTATCCTGGTTTaGGTGCTTCCTATGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWVSSLGPDSWDSANRSFGCILV*VLPMPS Trigger: AGAAGGCATAGGAAGCACCAAAACCAGGATACACCC...GAAGCTTCTGTTAGCAGAGTCCCAACTGTCAGGCCCCAAGCTAGAAACCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS CCA 90 bp | GAAGGCTCCACCAACCCTTTTCACATGGCAGTTGATCCTATTCTTTaGGATGCCCAAGGTGCGAGCCACCATTTCCTGTGTAAATGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EGSTNPFHMAVDPIL*DAQGASHHFLCKCS Trigger: GCTGCATTTACACAGGAAATGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 90 bp | TTCTTCACCTGGGTCAGGCTGAGGCCTGCGCCCAGTGTCAGCCCTTaGTTTGTATTAGTCACCACAAATAATTCTAAGATCCTTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FFTWVRLRPAPSVSP*FVLVTTNNSKILAG Trigger: TCCTGCAAGGATCTTAGAATTATTTGTGGTGACTAATACAAAGCAAGGGCTGACACTGGGCGCAGGCCTCAGCCTGACCCAGGTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 90 bp | TGTACATGTTTAGCTCTCGAACCTTCTCTGGTGGTAAGCGGCATTTaGCTGCCACAGCGGACATACAGGTTTCTGTTACAAATGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CTCLALEPSLVVSGI*LPQRTYRFLLQMPP Trigger: AGGGGGCATTTGTAACAGAAACCTGTATGTCCGCTGTGGCAGCCAAATGCCGCTTACCACCAGAGAAGGTTCGAGAGCTAAACATGTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 90 bp | TCATATGAAGCCCCAGATAGGTGTTGCCAATCACAAGTGGAGCGCTaGGATGCTTCATTTTCAGTTCCAGAAGGTCATTTAGGGTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SYEAPDRCCQSQVER*DASFSVPEGHLGFL Trigger: CAGGAACCCTAAATGACCTTCTGGAACTGAAAATGAAGCATCCCAGCGCTCCACTTGTGATTGGCAACACCTATCTGGGGCTTCATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGAGCCCAGGCTTGCTaGCTTTCCCTCCGAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGAQAC*LSLRRL Trigger: GAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 90 bp | CAGAACTGTATTTTGGGACTCCTCGGCCATCCTCATCAGCTCAGGTaGAAATATAAGCTCCTGAGTTGGATCCAAGGGCTGAAATTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNCILGLLGHPHQLR*KYKLLSWIQGLKFF Trigger: AAAGAATTTCAGCCCTTGGATCCAACTCAGGAGCTTATATTTCCACCTGAGCTGATGAGGATGGCCGAGGAGTCCCAAAATACAGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 90 bp | ACTTGCTCTGGCTTCAGGATTGCATCTGGAACTCCAGCGAGAAAATaGTCATTCAGAGGGATTTGCTGTATTCCTTCTGTTGAGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TCSGFRIASGTPARK*SFRGICCIPSVEAT Trigger: TGTTGCCTCAACAGAAGGAATACAGCAAATCCCTCTGAATGATCATTTTCTCGCTGGAGTTCCAGATGCAATCCTGAAGCCAGAGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 90 bp | CACAAAAACGGAGATGAGCACTTGCTCTGGCTTCAGGATTGCATCTaGAACTCCAGCGAGAAAATGATCATTCAGAGGGATTTGCTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: HKNGDEHLLWLQDCI*NSSEKMIIQRDLLY Trigger: ATACAGCAAATCCCTCTGAATGATCATTTTCTCGCTGGAGTTCCAGATGCAATCCTGAAGCCAGAGCAAGTGCTCATCTCCGTTTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 90 bp | TGCCCCTTCAATCTGGCCTATGTCCACAGCAGGATTTATACTGAATaGTCCATCCATAACAATGTCGGTTCTAATGTTCTTGTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPFNLAYVHSRIYTE*SIHNNVGSNVLVSS Trigger: GGAGCTCACAAGAACATTAGAACCGACATTGTTATGGATGGATCATTCAGTATAAATCCTGCTGTGGACATAGGCCAGATTGAAGGGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCTCTGGCTTCAGGATaGCATCTGGAACTCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNALASG*HLELQR Trigger: TCGCTGGAGTTCCAGATGCAATCCTGAAGCCAGAGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCCTTATCCTCTCCCTaGGGGACCACACGTACGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSLSSP*GTTRTL Trigger: AAGCGTACGTGTGGTCCCCAAGGGAGAGGATAAGGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATGCCCAAAATAGGGTaGAGGTCAGAGGTCGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNMPKIG*RSEVGS Trigger: ACTGCCGACCTCTGACCTCAACCCTATTTTGGGCAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCCTCTTCTCTGCCATaGTCACCAGGCACATCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSSSLP*SPGTSR Trigger: TCGAGATGTGCCTGGTGACAATGGCAGAGAAGAGGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 90 bp | AGCGAGAAAATGATCATTCAGAGGGATTTGCTGTATTCCTTCTGTTaGGGCAACATTGAGGATGCAATTGCCTATGCCCAAAATAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEKMIIQRDLLYSFC*GNIEDAIAYAQNRV Trigger: AACCCTATTTTGGGCATAGGCAATTGCATCCTCAATGTTGCCTCAACAGAAGGAATACAGCAAATCCCTCTGAATGATCATTTTCTCGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGATGGGGTCGTATCTaGAGATCATCACTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRWGRI*RSSLCR Trigger: CCTGCACAGTGATGATCTCAAGATACGACCCCATCT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGGGTGTATCCTGGTTTaGGTGCTTCCTATGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNGCILV*VLPMPS Trigger: AGAAGGCATAGGAAGCACCAAAACCAGGATACACCC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGATACAAACTCCCACTaGCTGGAGCGTGGCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNDTNSH*LERGTK Trigger: TTTTGTGCCACGCTCCAGCAAGTGGGAGTTTGTATC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATAGATGGCTTTTGGGTTaGGGGTTGGTGTCAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRWLLG*GLVSTV Trigger: CACTGTTGACACCAACCCCAAACCCAAAAGCCATCT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTCTTGCAGAGGCTGTaGGAAGTCTACATCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVLQRL*EVYILK Trigger: TTTCAGGATGTAGACTTCCAACAGCCTCTGCAAGAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATATTTTAGCATGTGACTaGCTGCTGGTTACCACTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNILACD*LLVTTA Trigger: GGCAGTGGTAACCAGCAGCAAGTCACATGCTAAAAT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTATTGGAAGGCAAGTaGGTCTTACAGACTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVLEGK*VLQTRP Trigger: AGGTCGAGTCTGTAAGACCAACTTGCCTTCCAATAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCCTCGAAACGCTGTATaGGAAGGCAAGTTGGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNPRNAV*EGKLVL Trigger: TAAGACCAACTTGCCTTCCAATACAGCGTTTCGAGG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATACATTGAGGATGCAATaGCCTATGCCCAAAATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNTLRMQ*PMPKIG Trigger: CCCTATTTTGGGCATAGGCAATTGCATCCTCAATGT...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATTCCTCACAAATCATCTaGCCAGCATCATCCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNSSQII*PASSSI Trigger: AATGCTGGATGATGCTGGCAAGATGATTTGTGAGGA...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCGTTGGGTCAAACTCTaGGTTGTGAATTGTCCTATC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNRWVKL*VVNCPI Trigger: GATAGGACAATTCACAACCAAGAGTTTGACCCAACG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCTTTTGGGTTTGGGGTaGGTGTCAACAGTGATACAT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLLGLG*VSTVIH Trigger: ATGTATCACTGTTGACACCAACCCCAAACCCAAAAG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGTGTTTGTGTCCTCCTaGAAAACGACTTTCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNVFVSS*KTTFIP Trigger: TGGAATGAAAGTCGTTTTCAAGGAGGACACAAACAC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCTTTTCACATGGCAGTaGATCCTATTCTTTGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLFTWQ*ILFFGM Trigger: CATCCCAAAGAATAGGATCAACTGCCATGTGAAAAG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGCCTTGATTTTCCCATaGTTCATGAAGCCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNALIFP*FMKPIL Trigger: CAAGATTGGCTTCATGAACAATGGGAAAATCAAGGC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGATTTGATCGGCACATaGAAATGCTTCCTCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNDLIGT*KCFLNI Trigger: AATGTTGAGGAAGCATTTCAATGTGCCGATCAAATC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATCTTCCAAAATCTCTGTaGGTTAAATTCATCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNLPKSL*VKFIHS Trigger: GCTGTGGATGAATTTAACCAACAGAGATTTTGGAAG...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGTAGACTCAGCACAGAAATTCTTCACACAGTGGAAAATTCCGTTTAATGAATTGTCCTATCGATaGTTCTGTACATGTTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSVDSAQKFFTQWKIPFNELSYR*FCTCLA Trigger: AGCTAAACATGTACAGAACAATCGATAGGACAATTC...ATTAAACGGAATTTTCCACTGTGTGAAGAATTTCTGTGCTGAGTCTACAGAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 72 bp | GCGGCCGGTCTTCTGTGCGGCTACAGCTGCCACGGATaGCAGGAGCCCAGGCTTGCTTGCTTTCCCTCCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAGLLCGYSCHG*QEPRLACFPSE Trigger: TTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGCACAGAAGACCGGCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 72 bp | GCGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTaGCTTGCTTTCCCTCCGAAGGCTCCACCAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AATAATDARSPG*LAFPPKAPPTL Trigger: AAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 72 bp | CGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTTaGTTGCTTTCCCTCCGAAGGCTCCACCAACCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RLQLPRMPGAQA*LLSLRRLHQPF Trigger: AAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CCA 72 bp | AGTCTGGAGACCACGTCAGACAAGACGTTCTTCACCTaGGTCAGGCTGAGGCCTGCGCCCAGTGTCAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLETTSDKTFFT*VRLRPAPSVSP Trigger: AGGGCTGACACTGGGCGCAGGCCTCAGCCTGACCCAGGTGAAGAACGTCTTGTCTGACGTGGTCTCCAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 90 bp | TCTGTGCGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTTGCTaGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SVRLQLPRMPGAQAC*LSLRRLHQPFSHGS Trigger: ACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGCACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 90 bp | GTCTTCTGTGCGGCTACAGCTGCCACGGATGCCAGGAGCCCAGGCTaGCTTGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGG | + |
|
Preference number: 6 (lower is better) Translates to: VFCAATAATDARSPG*LAFPPKAPPTLFTW Trigger: CCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAGCCGCACAGAAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 72 bp | TACAGCTGCCACGGATGCCAGGAGCCCAGGCTTGCTTaGTTTCCCTCCGAAGGCTCCACCAACCCTTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: YSCHGCQEPRLA*FPSEGSTNPFH Trigger: GTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS GCA 72 bp | CTGAACAGCTCTCCCGTTGACATCGGCACCGGTGGATaGTCCAGTGGTAACCGTGTTGGGGACGGTCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: LNSSPVDIGTGG*SSGNRVGDGHS Trigger: ACTGTGACCGTCCCCAACACGGTTACCACTGGAGCATCCACCGGTGCCGATGTCAACGGGAGAGCTGTTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 72 bp | CTACAGCTGCCACGGATGCCAGGAGCCCAGGCTTGCTaGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQLPRMPGAQAC*LSLRRLHQPFS Trigger: TGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAGCAAGCCTGGGCTCCTGGCATCCGTGGCAGCTGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | CGTGAACTGGTCCTCACAGGCCATGCGGATCACTTCTaGTGTGGCAGGGCTGTTTATGGCCCAAATTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RELVLTGHADHF*CGRAVYGPNWG Trigger: TCCCCAATTTGGGCCATAAACAGCCCTGCCACAGCAGAAGTGATCCGCATGGCCTGTGAGGACCAGTTCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | ACTGGTCCTCACAGGCCATGCGGATCACTTCTGCTGTaGCAGGGCTGTTTATGGCCCAAATTGGGGACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TGPHRPCGSLLL*QGCLWPKLGTS Trigger: GCTTGTCCCCAATTTGGGCCATAAACAGCCCTGCCACAGCAGAAGTGATCCGCATGGCCTGTGAGGACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS TCA 72 bp | CTGTTGCAAACGCGTTTTGCTGACGAGGGGCCTGTCTaGAGGCTGATACAAACTCCCACTTGCTGGAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQTRFADEGPV*RLIQTPTCWSV Trigger: CACGCTCCAGCAAGTGGGAGTTTGTATCAGCCTTCAGACAGGCCCCTCGTCAGCAAAACGCGTTTGCAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | AGACAAGACGTTCTTCACCTGGGTCAGGCTGAGGCCTaGGCCCAGTGTCAGCCCTTGCTTTGTATTAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RQDVLHLGQAEA*AQCQPLLCISH Trigger: GTGACTAATACAAAGCAAGGGCTGACACTGGGCGCAGGCCTCAGCCTGACCCAGGTGAAGAACGTCTTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 72 bp | CGAGGGGCCTGTCTGAAGGCTGATACAAACTCCCACTaGCTGGAGCGTGGCACAAAAACGGAGATGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: RGACLKADTNSH*LERGTKTEMST Trigger: AGTGCTCATCTCCGTTTTTGTGCCACGCTCCAGCAAGTGGGAGTTTGTATCAGCCTTCAGACAGGCCCCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | AAACGCGTTTTGCTGACGAGGGGCCTGTCTGAAGGCTaGTACAAACTCCCACTTGCTGGAGCGTGGCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: KRVLLTRGLSEG*YKLPLAGAWHK Trigger: TTTGTGCCACGCTCCAGCAAGTGGGAGTTTGTATCAGCCTTCAGACAGGCCCCTCGTCAGCAAAACGCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS TCA 72 bp | CTCCGAAGGCTCCACCAACCCTTTTCACATGGCAGTTaGTCCTATTCTTTGGGATGCCCAAGGTGCGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LRRLHQPFSHGS*SYSLGCPRCEP Trigger: TGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | CCTCCAGGGGCTGCCATCAGGAGGGAGACTTCCTCACAAATCATCTaGCCAGCATCATCCAGCATTTCTTCATCCCAGCACCTTCCAATC | + |
|
Preference number: 6 (lower is better) Translates to: PPGAAIRRETSSQII*PASSSISSSQHLPI Trigger: GATTGGAAGGTGCTGGGATGAAGAAATGCTGGATGATGCTGGCAAGATGATTTGTGAGGAAGTCTCCCTCCTGATGGCAGCCCCTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | CTTGCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATGGCAGTaGATCCTATTCTTTGGGATGCCCAAGGTGCGAGCCACCATTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAFPPKAPPTLFTWQ*ILFFGMPKVRATIS Trigger: GGAAATGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | GGGTTGAGGTCAGAGGTCGGCAGTCTACTGATAATATaGCCACCTAAGGAGGCCACATTCCTGATCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLRSEVGSLLII*PPKEATFLICC Trigger: GCAGCAGATCAGGAATGTGGCCTCCTTAGGTGGTCATATTATCAGTAGACTGCCGACCTCTGACCTCAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | CACATCTCGAGCTGTTACCACATCAACCACACCAAGTaGCGCCAAGGCCTCGGAGGCATCAAGAGAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: HISSCYHINHTK*RQGLGGIKRDD Trigger: ATCATCTCTCTTGATGCCTCCGAGGCCTTGGCGTCACTTGGTGTGGTTGATGTGGTAACAGCTCGAGATGTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TTTTGGAGATGGGGTCGTATCTTGAGATCATCACTGTaGAGGCGCCACAGTCACCTCCTCCACAGCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: FWRWGRILRSSL*RRHSHLLHSHT Trigger: AGTATGGCTGTGGAGGAGGTGACTGTGGCGCCTGCACAGTGATGATCTCAAGATACGACCCCATCTCCAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
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| CDS CCA 72 bp | GCTTTCCCTCCGAAGGCTCCACCAACCCTTTTCACATaGCAGTTGATCCTATTCTTTGGGATGCCCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AFPPKAPPTLFT*QLILFFGMPKV Trigger: CACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGTGGAGCCTTCGGAGGGAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | GCCAAGGCCTCGGAGGCATCAAGAGAGATGATTTTAGCATGTGACTaGCTGCTGGTTACCACTGCCAAGAAGAGTTCCCCAGGCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: AKASEASREMILACD*LLVTTAKKSSPGNT Trigger: TGTGTTGCCTGGGGAACTCTTCTTGGCAGTGGTAACCAGCAGCAAGTCACATGCTAAAATCATCTCTCTTGATGCCTCCGAGGCCTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | CTGTACATGTTTAGCTCTCGAACCTTCTCTGGTGGTAAGCGGCATTaGGCTGCCACAGCGGACATACAGGTTTCTGTTACAAATGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYMFSSRTFSGGKRH*AATADIQVSVTNAP Trigger: GGGGGCATTTGTAACAGAAACCTGTATGTCCGCTGTGGCAGCCAAATGCCGCTTACCACCAGAGAAGGTTCGAGAGCTAAACATGTACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | AATACTGCCTCTCCTGTGGCGTGTTTAATGCCAGACTaGTGCATGATGGGACGTCCGATTGGGTCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: NTASPVACLMPD*CMMGRPIGSCR Trigger: TCTGCAAGACCCAATCGGACGTCCCATCATGCATCAGTCTGGCATTAAACACGCCACAGGAGAGGCAGTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | AAGAGTCTTTCGGTATTCCTCCATCCCTCCAGGGGCTaGCATCAGGAGGGAGACTTCCTCACAAATCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: KSLSVFLHPSRG*HQEGDFLTNHL Trigger: AAGATGATTTGTGAGGAAGTCTCCCTCCTGATGGCAGCCCCTGGAGGGATGGAGGAATACCGAAAGACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | ATAGATTCCCGCCCAGGGTTTCCATTATCTGTTCTGTaGAGGGCTCTGGGTGGTTCCTCAGGAGAGTATAGA | + |
|
Preference number: 6 (lower is better) Translates to: IDSRPGFPLSVL*RALGGSSGEYR Trigger: TCTATACTCTCCTGAGGAACCACCCAGAGCCCTCCACAGAACAGATAATGGAAACCCTGGGCGGGAATCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
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| CDS CCA 72 bp | ATTTTGGGACTCCTCGGCCATCCTCATCAGCTCAGGTaGAAATATAAGCTCCTGAGTTGGATCCAAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ILGLLGHPHQLR*KYKLLSWIQGL Trigger: CAGCCCTTGGATCCAACTCAGGAGCTTATATTTCCACCTGAGCTGATGAGGATGGCCGAGGAGTCCCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | CATTTAGAATCCGTTTGTGGAACCAGGTTCGTGAACTaGTCCTCACAGGCCATGCGGATCACTTCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLESVCGTRFVN*SSQAMRITSAV Trigger: CACAGCAGAAGTGATCCGCATGGCCTGTGAGGACCAGTTCACGAACCTGGTTCCACAAACGGATTCTAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 72 bp | AAGCCAAATCCTCGAAACGCTGTATTGGAAGGCAAGTaGGTCTTACAGACTCGACCTCGGACACGGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KPNPRNAVLEGK*VLQTRPRTRRL Trigger: CAACCTCCGTGTCCGAGGTCGAGTCTGTAAGACCAACTTGCCTTCCAATACAGCGTTTCGAGGATTTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | CAGATCACCTCATCCTGTGCATATAGGCTTTCCTCTTCTCTGCCATaGTCACCAGGCACATCTCGAGCTGTTACCACATCAACCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: QITSSCAYRLSSSLP*SPGTSRAVTTSTTP Trigger: TGGTGTGGTTGATGTGGTAACAGCTCGAGATGTGCCTGGTGACAATGGCAGAGAAGAGGAAAGCCTATATGCACAGGATGAGGTGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TCACCTCATCCTGTGCATATAGGCTTTCCTCTTCTCTaGCATTGTCACCAGGCACATCTCGAGCTGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: SPHPVHIGFPLL*HCHQAHLELLP Trigger: TGGTAACAGCTCGAGATGTGCCTGGTGACAATGGCAGAGAAGAGGAAAGCCTATATGCACAGGATGAGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | TTTAATGCCAGACTGATGCATGATGGGACGTCCGATTaGGTCTTGCAGAGGCTGTTGGAAGTCTACATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FNARLMHDGTSD*VLQRLLEVYIL Trigger: CAGGATGTAGACTTCCAACAGCCTCTGCAAGACCCAATCGGACGTCCCATCATGCATCAGTCTGGCATTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | ACCAACCCTTTTCACATGGCAGTTGATCCTATTCTTTaGGATGCCCAAGGTGCGAGCCACCATTTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TNPFHMAVDPIL*DAQGASHHFLC Trigger: ACACAGGAAATGGTGGCTCGCACCTTGGGCATCCCAAAGAATAGGATCAACTGCCATGTGAAAAGGGTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | TTAGCTCTCGAACCTTCTCTGGTGGTAAGCGGCATTTaGCTGCCACAGCGGACATACAGGTTTCTGTTACAA | + |
|
Preference number: 6 (lower is better) Translates to: LALEPSLVVSGI*LPQRTYRFLLQ Trigger: TTGTAACAGAAACCTGTATGTCCGCTGTGGCAGCCAAATGCCGCTTACCACCAGAGAAGGTTCGAGAGCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 72 bp | TTTAGCTCTCGAACCTTCTCTGGTGGTAAGCGGCATTaGGCTGCCACAGCGGACATACAGGTTTCTGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: FSSRTFSGGKRH*AATADIQVSVT Trigger: TGTAACAGAAACCTGTATGTCCGCTGTGGCAGCCAAATGCCGCTTACCACCAGAGAAGGTTCGAGAGCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS TCA 72 bp | GCAACATTTCCCTTCCCCATTCATCTGGCAGCAAGTTaGACTCGGGCAGAAACTTTTCGCACTCTCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATFPFPIHLAAS*TRAETFRTLHN Trigger: ATTGTGGAGAGTGCGAAAAGTTTCTGCCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGGGAAATGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
||
| CDS CCA 72 bp | GCCCCAGATAGGTGTTGCCAATCACAAGTGGAGCGCTaGGATGCTTCATTTTCAGTTCCAGAAGGTCATTTA | + |
|
Preference number: 6 (lower is better) Translates to: APDRCCQSQVER*DASFSVPEGHL Trigger: TAAATGACCTTCTGGAACTGAAAATGAAGCATCCCAGCGCTCCACTTGTGATTGGCAACACCTATCTGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CCA 72 bp | CATATGAAGCCCCAGATAGGTGTTGCCAATCACAAGTaGAGCGCTGGGATGCTTCATTTTCAGTTCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HMKPQIGVANHK*SAGMLHFQFQK Trigger: CTTCTGGAACTGAAAATGAAGCATCCCAGCGCTCCACTTGTGATTGGCAACACCTATCTGGGGCTTCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CCA 72 bp | ATGTGTAGGAGTTTCTGTGAGATGTCAGGGTACTTGTaGGGGTCCCTCGTCTTTAACTGCTTCAACACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MCRSFCEMSGYL*GSLVFNCFNTS Trigger: AGACGTGTTGAAGCAGTTAAAGACGAGGGACCCCCACAAGTACCCTGACATCTCACAGAAACTCCTACACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 72 bp | AGCAACATTTCCCTTCCCCATTCATCTGGCAGCAAGTaGAACTCGGGCAGAAACTTTTCGCACTCTCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SNISLPHSSGSK*NSGRNFSHSPQ Trigger: TTGTGGAGAGTGCGAAAAGTTTCTGCCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGGGAAATGTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
||
| CDS CAA 72 bp | AGAATGTGTAGGAGTTTCTGTGAGATGTCAGGGTACTaGTGGGGGTCCCTCGTCTTTAACTGCTTCAACACG | + |
|
Preference number: 6 (lower is better) Translates to: RMCRSFCEMSGY*WGSLVFNCFNT Trigger: CGTGTTGAAGCAGTTAAAGACGAGGGACCCCCACAAGTACCCTGACATCTCACAGAAACTCCTACACATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS CAA 72 bp | TCGGAGGCATCAAGAGAGATGATTTTAGCATGTGACTaGCTGCTGGTTACCACTGCCAAGAAGAGTTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SEASREMILACD*LLVTTAKKSSP Trigger: TGGGGAACTCTTCTTGGCAGTGGTAACCAGCAGCAAGTCACATGCTAAAATCATCTCTCTTGATGCCTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
||
| CDS TCA 72 bp | AGCCACCATTTCCTGTGTAAATGCAGCATCCTGGCTTaGCACATAGATGTCCATCTCCTTATCCTCTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: SHHFLCKCSILA*HIDVHLLILSL Trigger: AAGGGAGAGGATAAGGAGATGGACATCTATGTGTCAAGCCAGGATGCTGCATTTACACAGGAAATGGTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TTCCCCAGGCAACACAGACATATCATCACAAAATACTaGCTCTCCTGTGGCGTGTTTAATGCCAGACTGATG | + |
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Preference number: 6 (lower is better) Translates to: FPRQHRHIITKY*LSCGVFNARLM Trigger: CATCAGTCTGGCATTAAACACGCCACAGGAGAGGCAGTATTTTGTGATGATATGTCTGTGTTGCCTGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TGGGGTGCAGCCTCCATTGATATAAAGCTGGATGTCTaGCGCCTTGATTTTCCCATTGTTCATGAAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: WGAASIDIKLDV*RLDFPIVHEAN Trigger: ATTGGCTTCATGAACAATGGGAAAATCAAGGCGGCAGACATCCAGCTTTATATCAATGGAGGCTGCACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TCCTTAACCCATTCTTCCCAGGTACCACTAGGATTCTaGTTGATGATGGGTTCCAGACGCTTCATAAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SLTHSSQVPLGF*LMMGSRRFIRI Trigger: GATCCTTATGAAGCGTCTGGAACCCATCATCAAGCAGAATCCTAGTGGTACCTGGGAAGAATGGGTTAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CCA 72 bp | TCTTCATCCAAGCAACATTTCCCTTCCCCATTCATCTaGCAGCAAGTTGAACTCGGGCAGAAACTTTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSKQHFPSPFI*QQVELGQKLFA Trigger: TGCGAAAAGTTTCTGCCCGAGTTCAACTTGCTGCCAGATGAATGGGGAAGGGAAATGTTGCTTGGATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040999.14 ENSMUST00000162011.3 |
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| CDS CCA 72 bp | CAGATAAAAGCAGAGGCACAACTGAGGACAAGCTGGTaGATGTGTCCCTTCTCTTGCAAGCATCATAAAACC | + |
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Preference number: 6 (lower is better) Translates to: QIKAEAQLRTSW*MCPFSCKHHKT Trigger: GGTTTTATGATGCTTGCAAGAGAAGGGACACATCCACCAGCTTGTCCTCAGTTGTGCCTCTGCTTTTATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS CCA 72 bp | GAGCAGATAAAAGCAGAGGCACAACTGAGGACAAGCTaGTGGATGTGTCCCTTCTCTTGCAAGCATCATAAA | + |
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Preference number: 6 (lower is better) Translates to: EQIKAEAQLRTS*WMCPFSCKHHK Trigger: TTTATGATGCTTGCAAGAGAAGGGACACATCCACCAGCTTGTCCTCAGTTGTGCCTCTGCTTTTATCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162011.3 |
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| CDS CAA 72 bp | TTTCCACACATGCCTCCCAGCACTGTAGCAGATTCGTaGGGTCAAACTCTTGGTTGTGAATTGTCCTATCGA | + |
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Preference number: 6 (lower is better) Translates to: FPHMPPSTVADS*GQTLGCELSYR Trigger: TCGATAGGACAATTCACAACCAAGAGTTTGACCCAACGAATCTGCTACAGTGCTGGGAGGCATGTGTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | GCAGATTCGTTGGGTCAAACTCTTGGTTGTGAATTGTCCTATCGATaGTTCTGTACATGTTTAGCTCTCGAACCTTCTCTGGTGGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: ADSLGQTLGCELSYR*FCTCLALEPSLVVS Trigger: GCTTACCACCAGAGAAGGTTCGAGAGCTAAACATGTACAGAACAATCGATAGGACAATTCACAACCAAGAGTTTGACCCAACGAATCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | AGGAAGAATTTTCCACACATGCCTCCCAGCACTGTAGCAGATTCGTaGGGTCAAACTCTTGGTTGTGAATTGTCCTATCGATTGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RKNFPHMPPSTVADS*GQTLGCELSYRLFC Trigger: ACAGAACAATCGATAGGACAATTCACAACCAAGAGTTTGACCCAACGAATCTGCTACAGTGCTGGGAGGCATGTGTGGAAAATTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | GGCTTCAGGATTGCATCTGGAACTCCAGCGAGAAAATaGTCATTCAGAGGGATTTGCTGTATTCCTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: GFRIASGTPARK*SFRGICCIPSV Trigger: AACAGAAGGAATACAGCAAATCCCTCTGAATGATCATTTTCTCGCTGGAGTTCCAGATGCAATCCTGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 90 bp | CCTCCATATAAGATCCCCAAGTCTGTAATGGTGTTTGTGTCCTCCTaGAAAACGACTTTCATTCCAGCATTCACTGTTGCAAACGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: PPYKIPKSVMVFVSS*KTTFIPAFTVANAF Trigger: AAACGCGTTTGCAACAGTGAATGCTGGAATGAAAGTCGTTTTCAAGGAGGACACAAACACCATTACAGACTTGGGGATCTTATATGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS GCA 72 bp | TCTAGTTTTCTTTCAGGTCCAATGAATGATTCATATTaGAGTGCATCCTGCACTGTCACAATCATGGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSFLSGPMNDSY*SASCTVTIMGS Trigger: AGAGCCCATGATTGTGACAGTGCAGGATGCACTGCAATATGAATCATTCATTGGACCTGAAAGAAAACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS CAA 72 bp | TTGGGTCAAACTCTTGGTTGTGAATTGTCCTATCGATaGTTCTGTACATGTTTAGCTCTCGAACCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LGQTLGCELSYR*FCTCLALEPSL Trigger: CAGAGAAGGTTCGAGAGCTAAACATGTACAGAACAATCGATAGGACAATTCACAACCAAGAGTTTGACCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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| CDS TCA 72 bp | AATCTGGCCTATGTCCACAGCAGGATTTATACTGAATaGTCCATCCATAACAATGTCGGTTCTAATGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NLAYVHSRIYTE*SIHNNVGSNVL Trigger: AAGAACATTAGAACCGACATTGTTATGGATGGATCATTCAGTATAAATCCTGCTGTGGACATAGGCCAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040999.14 |
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