Pregenerated sensors for AOX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079554Ensembl transcript IDs: ENSMUST00000114366.3
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTaGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCCTGTGCCCACT | + |
|
Preference number: 1 (lower is better) Translates to: TCGQLYPGPCKPVCL*LQVMRAALQAPVPT Trigger: AGTGGGCACAGGGGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 90 bp | GCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTCAGTaGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGT | + |
|
Preference number: 1 (lower is better) Translates to: ACFSWTPVAREPLSQ*MDLWTAVPWSLQAS Trigger: ACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGACTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 90 bp | CATCATGATAGTTGCTGGCAGGCTCTTTCAGGCAAAAATGGCGTCTaGACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACATT | + |
|
Preference number: 1 (lower is better) Translates to: HHDSCWQALSGKNGV*TPGLLSFPSICSNI Trigger: AATGTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTTGCCTGAAAGAGCCTGCCAGCAACTATCATGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 90 bp | CTGGTGGCCTCTAAGCTGAGGACCCTAAGTAAACAATTTGTAAGATaGCTCATCTCTCTAATGTGGTTAGATTTGAATAGTGATTCTAAA | + |
|
Preference number: 1 (lower is better) Translates to: LVASKLRTLSKQFVR*LISLMWLDLNSDSK Trigger: TTTAGAATCACTATTCAAATCTAACCACATTAGAGAGATGAGGCATCTTACAAATTGTTTACTTAGGGTCCTCAGCTTAGAGGCCACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTCAGGTGATGAGGGCTaGTCTCCAGGCCCCTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: SVDGLVDSCTLVPASQCVSGDEG*SPGPCA Trigger: GGCACAGGGGCCTGGAGAGCAGCCCTCATCACCTGA...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCGGCAAAAATGGCGTCTaGACACCAGGTCTCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PCKPVCLWLQVMRAALQAGKNGV*TPGLLS Trigger: GGAAAGGAGACCTGGTGTGCAGACGCCATTTTTGCC...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTGGACAGCTGTACCCTaGTCCCTGCAAGCCAGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQWTAVP*SLQASV Trigger: CACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCTCCTTTCCCTCCATCTaGAGCAACATTTACTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PCKPVCLWLQVMRAALQASFPSI*SNIYSV Trigger: CACTGAGTAAATGTTGCTGCAGATGGAGGGAAAGGA...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTAGGCATCATGATAGTTaGTGGCAGGCTCTTTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: QWMDLWTAVPWSLQASVSRHHDS*WQALSG Trigger: GCCTGAAAGAGCCTGCCAGCAACTATCATGATGCCT...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTAAGTGCTTCAAACATTaGAGTGCTTATCTGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: QWMDLWTAVPWSLQASVSKCFKH*SAYLVA Trigger: GGCCACCAGATAAGCACTGCAATGTTTGAAGCACTT...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTCTCATCCACTTTCTaGTCAATAGACCCAATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SVDGLVDSCTLVPASQCVFSSTF*SIDPIY Trigger: ATAAATTGGGTCTATTGACCAGAAAGTGGATGAGAA...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAAGCTGGCTTTTCACTTaGGTACTAAAATATCTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKSWLFT*VLKYLL Trigger: TAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCT...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 72 bp | CAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTaGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QLYPGPCKPVCL*LQVMRAALQAP Trigger: AGGGGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 72 bp | GGACTCCTGTGGCCAGGGAACCTCTCAGTCAGTGGATaGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLLWPGNLSVSG*TCGQLYPGPCK Trigger: CTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGACTGAGAGGTTCCCTGGCCACAGGAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 72 bp | TCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTCAGTaGATGGACTTGTGGACAGCTGTACCCTGGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SWTPVAREPLSQ*MDLWTAVPWSL Trigger: CAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGACTGAGAGGTTCCCTGGCCACAGGAGTCCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 72 bp | CTCAGTCAGTGGATGGACTTGTGGACAGCTGTACCCTaGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSQWMDLWTAVP*SLQASVSVASG Trigger: ACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 72 bp | CCCCTCCCTCCCGCCCAGCAGCGTACAAATACAGTATaGAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLPPAQQRTNTV*SPVRSKKLAFH Trigger: GTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATACTGTATTTGTACGCTGCTGGGCGGGAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 72 bp | CTCAGCCACCCTGAAAAGTTCGTTGCCTTCTGCCCGTaGACCTTAACTTGTCCTGTTCTGACCCTTCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSHPEKFVAFCP*TLTCPVLTLLP Trigger: GGGCAGAAGGGTCAGAACAGGACAAGTTAAGGTGCACGGGCAGAAGGCAACGAACTTTTCAGGGTGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 72 bp | AGTTGCTGGCAGGCTCTTTCAGGCAAAAATGGCGTCTaGACACCAGGTCTCCTTTCCTTTCCCTCCATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SCWQALSGKNGV*TPGLLSFPSIC Trigger: GCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTTGCCTGAAAGAGCCTGCCAGCAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 72 bp | GGCTCAGTGGCTCCTGGTCAAAGGCATCATGATAGTTaGTGGCAGGCTCTTTCAGGCAAAAATGGCGTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSVAPGQRHHDS*WQALSGKNGVC Trigger: GCAGACGCCATTTTTGCCTGAAAGAGCCTGCCAGCAACTATCATGATGCCTTTGACCAGGAGCCACTGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CAA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTAAAGTGCTTCAAACATaGCAGTGCTTATCTGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: YPGPCKPVCLWLQVMRAAKVLQT*QCLSGG Trigger: GCCACCAGATAAGCACTGCAATGTTTGAAGCACTTT...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCAAAGGGATGTTCACTaGCTGAACAATCATCTAACA | + |
|
Preference number: 3 (lower is better) Translates to: PCKPVCLWLQVMRAALQAQRDVH*LNNHLT Trigger: TGTTAGATGATTGTTCAGCAAGTGAACATCCCTTTG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCTTCATTTACTCCCTGTaGCTTGTTTCAATGTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PCKPVCLWLQVMRAALQAFIYSL*LVSMYE Trigger: CTCATACATTGAAACAAGCAACAGGGAGTAAATGAA...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGCAATTTTCTGCTCCTTaGAAAGCTCTTAAAACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQQFSAP*KALKTC Trigger: ACAGGTTTTAAGAGCTTTCAAAGGAGCAGAAAATTG...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CCA 72 bp | GCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTaGGTACTAAAATATCTCTTAGGAAATGACAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AVQSGVRSWLFT*VLKYLLGNDSC Trigger: GCAGCTGTCATTTCCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR TCA 72 bp | GTGATTCATTTACTCCCTGTTGCTTGTTTCAATGTATaGGGAACTGAGCCATCCAGTATTTCTGAAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VIHLLPVACFNV*GTEPSSISEAL Trigger: CAGAGCTTCAGAAATACTGGATGGCTCAGTTCCTCATACATTGAAACAAGCAACAGGGAGTAAATGAATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR GCA 72 bp | TCTAAGCTGAGGACCCTAAGTAAACAATTTGTAAGATaGCTCATCTCTCTAATGTGGTTAGATTTGAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKLRTLSKQFVR*LISLMWLDLNS Trigger: ACTATTCAAATCTAACCACATTAGAGAGATGAGGCATCTTACAAATTGTTTACTTAGGGTCCTCAGCTTAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCCACACTGGGTGCCGTaGCTCTTGGCGATCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQAPHWVP*LLAILS Trigger: GGAGAGGATCGCCAAGAGCCACGGCACCCAGTGTGG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCTCCCAAGGCCTCCATaGGCTGTTCCTCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQALPRPP*AVPLRA Trigger: AGCCCTCAGAGGAACAGCTCATGGAGGCCTTGGGAG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCGTTACCAGGGCTCCCTaGGGGAAGCCAAACCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQAVTRAP*GKPNPR Trigger: TCGTGGGTTTGGCTTCCCTCAGGGAGCCCTGGTAAC...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCGTGACACCATCACTGTaGAGGCCCCACAGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQAVTPSL*RPHSLL Trigger: CAGGAGGCTGTGGGGCCTGCACAGTGATGGTGTCAC...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCGTTCTGGGGGAAATATaGGCTCCTGGGTCGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQAVLGEI*APGSGP Trigger: TGGACCCGACCCAGGAGCTCATATTTCCCCCAGAAC...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTCAGGCAAGGCGTTCTaGTGGCACTGGGCCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSSGKAF*WHWACR Trigger: CCGGCAGGCCCAGTGCCATCAGAACGCCTTGCCTGA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTGTGACAGCAGCCCCATaGAGGGAGCACAGGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVAVTAAP*REHRGT Trigger: GGTGCCCCTGTGCTCCCTGCATGGGGCTGCTGTCAC...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCGGCCCAGAAGCTGCTaGCAGGACCTTTGTGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAARPRSC*QDLCAL Trigger: CAGCGCACAAAGGTCCTGCCAGCAGCTTCTGGGCCG...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCCACCACGGCACAGATaGCCTGGCCCACACAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAAPPRHR*PGPHRE Trigger: TTCTCTGTGTGGGCCAGGTCATCTGTGCCGTGGTGG...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTTGGCGATCCTCTCCTaGACGGGGTGGAGCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVALAILS*TGWSLV Trigger: GACCAGGCTCCACCCCGTGCAGGAGAGGATCGCCAA...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCGGGGTAGCGTGACCTaGAAATCTCCCAGAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQARGSVT*KSPREL Trigger: AAGCTCTCTGGGAGATTTCCAGGTCACGCTACCCCG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CAA 72 bp | CCTGTGGCCAGGGAACCTCTCAGTCAGTGGATGGACTaGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PVAREPLSQWMD*WTAVPWSLQAS Trigger: ACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGACTGAGAGGTTCCCTGGCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGCATGAGCTGTTCCTCTaGGGGCTGCGGGTGGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WMDLWTAVPWSLQASVSVHELFL*GLRVVP Trigger: AGGAACCACCCGCAGCCCTCAGAGGAACAGCTCATG...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCTGGGGCGATCCAGGTaGTTCTCTCTCCATAAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQALGRSR*FSLHKR Trigger: CCTTTTATGGAGAGAGAATCACCTGGATCGCCCCAG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGTTTGCCTCCCAGGGCTaGGCCTGGAAGGGAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WMDLWTAVPWSLQASVSVFASQG*AWKGDF Trigger: GAAGTCTCCCTTCCAGGCTCAGCCCTGGGAGGCAAA...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTCACCATCCCAGGGGTaGAGAAGCCACACTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVDGLVDSCTLVPASQCVSPSQG*RSHTGC Trigger: GCACCCAGTGTGGCTTCTGCACCCCTGGGATGGTGA...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGGTGGAGCCTGGTCTTaGTGCTTCCCACACCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WMDLWTAVPWSLQASVSVGGAWS*CFPHLP Trigger: TGGAAGGTGTGGGAAGCATCAAGACCAGGCTCCACC...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGCTGCGGGTGGTTCCTaGGCAGTGTGTAGATGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSAAGGS*AVCRWT Trigger: TGTCCATCTACACACTGCTCAGGAACCACCCGCAGC...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGAAGATGTCCTTCACCTaGGCCAGGCTGCAGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WMDLWTAVPWSLQASVSVKMSFT*ARLQQA Trigger: TGCCTGCTGCAGCCTGGCTCAGGTGAAGGACATCTT...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTTGACGAATAGAGGGTaGGCGGGGTCTGAGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVALTNRG*AGSERT Trigger: CGTCCTCTCAGACCCCGCTCACCCTCTATTCGTCAA...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTGTTCCTCTGAGGGCTaGGGGTGGTTCCTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVACSSEG*GWFLSS Trigger: ACTGCTCAGGAACCACCCGCAGCCCTCAGAGGAACA...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCTGAGTTTTCTCCTGTaGGAGCTCAGAGATGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQALSFLL*ELRDAL Trigger: GAGAGCATCTCTGAGCTCCCACAGGAGAAAACTCAG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTGCTCCGAACACAGCTaGCCTCCCCACCTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQCSEHS*PPHLSS Trigger: GGAGGAAAGGTGGGGAGGCCAGCTGTGTTCGGAGCA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGCTGGGCTCTTCACTGTaGAGTCCTCCGCTATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WMDLWTAVPWSLQASVSVLGSSL*SPPLCL Trigger: GAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAG...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTTTCTTGGAGGGTTCCTaGGGCGATCCAGGTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAAFLEGS*GDPGDS Trigger: AGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAA...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCCCACTCTGGGGTTGCTaGGCTCTTCACTGTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SVDGLVDSCTLVPASQCVPLWGC*ALHCEV Trigger: GACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGG...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCTTGTCCTTCTGATGTaGAAGGAAGACTTGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQALVLLM*KEDLSR Trigger: TCTGGACAAGTCTTCCTTTCACATCAGAAGGACAAG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTAAGCCCACATTTGGCTaGCACAGCTGTGATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSKPTFG*HSCDAG Trigger: TCCTGCATCACAGCTGTGGCAGCCAAATGTGGGCTT...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTTCTGCCCAATATCAATaGCCGGATTCAGGCTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAASAQYQ*PDSGCN Trigger: GTTGCAGCCTGAATCCGGCCATTGATATTGGGCAGA...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCATCCGCACCCACTCTaGGGTTGCTGGGCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNHPHPL*GCWALH Trigger: GTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGGTTGCTCGTTTTGCCTaGACATCAGTCTCTGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQVARFA*TSVSAT Trigger: GGTGGCAGAGACTGATGTTCAGGCAAAACGAGCAAC...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTCGTTTGAGAAGGATTTaGCAGGCATTCTGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVARLRRI*QAFCTA Trigger: GGCTGTGCAGAATGCCTGTCAAATCCTTCTCAAACG...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACTCGGGATCATGTCCGTaGACCGATCTGCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNSGSCP*TDLHRP Trigger: TGGCCTGTGCAGATCGGTTCACGGACATGATCCCGA...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCTCGGGCTTCAGGTCTaGACTTGCCAACCCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNLGLQV*TCQPSK Trigger: CTTGCTGGGTTGGCAAGTGCAGACCTGAAGCCCGAG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGGATGGGACGTCCAACTaGATCTTGGAGAGGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQDGTSN*ILERLV Trigger: CACCAACCTCTCCAAGATCCAGTTGGACGTCCCATC...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGACTGTTTTCTGTACGTaGGCTGGGTCCTGTGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQTVFCT*AGSCVD Trigger: GTCCACACAGGACCCAGCCCACGTACAGAAAACAGT...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGACAAGACGAATGGGATaGCCAGTTTTGACAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQTRRMG*PVLTAP Trigger: GGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGT...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTCGCAGCAAAGCCAACTaGAAACTTCATGGGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSRSKAN*KLHGDN Trigger: ATTGTCCCCATGAAGTTTTCAGTTGGCTTTGCTGCG...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGCATCCAGAAGCAGTCTaGAAGCCTCGTCTAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQHPEAV*KPRLAS Trigger: TGATGCTAGACGAGGCTTGCAGACTGCTTCTGGATG...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTTAAGACCTGACAGGTaGATGATGGGACGTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVALRPDR*MMGRPT Trigger: AGTTGGACGTCCCATCATGCACCTGTCAGGTCTTAA...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTTCATTGCCTCCATGTaGCACCAACACAGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQFIASM*HQHRAI Trigger: GATGGCTCTGTGTTGGTGGCACATGGAGGCAATGAA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTTCTCCATGTCCCTTCTaGGTTTTTCTTAATGACGGG | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAASPCPF*VFLNDG Trigger: CCCGTCATTAAGAAAAACCCAGAAGGGACATGGAGA...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTCACGTTAAACTGCTCTaGGACATCAGTGACAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVAHVKLL*DISDSW Trigger: CCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTG...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTGGCATCCTCGATGGTaGAAATCACAGGTTTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSWHPRW*KSQVSD Trigger: ATCTGAAACCTGTGATTTTCACCATCGAGGATGCCA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTATGTGCAGCCTCCATTaGTGTAGCATTCAATGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YPGPCKPVCLWLQVMRAAMCSLH*CSIQCL Trigger: TAGACATTGAATGCTACATCAATGGAGGCTGCACAT...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCCACAGGAACGAATTGTaGTTTATGGCATCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SVDGLVDSCTLVPASQCVHRNEL*FMASSM Trigger: CATCGAGGATGCCATAAAGCACAATTCGTTCCTGTG...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCTTGCCCCAGTTCATTaGCTCCATGTGCCACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNLAPVH*LHVPPT Trigger: TGTTGGTGGCACATGGAGGCAATGAACTGGGGCAAG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTCCGTCCACTGTTCATaGATCCCACTTTGTATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVDGLVDSCTLVPASQCVSVHCS*IPLCIL Trigger: CAAAATACAAAGTGGGATTCATGAACAGTGGACGGA...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATAGGGTGAGCGGGGTCTaGGAGGACGGCAGCAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYRVSGV*EDGSKD Trigger: GTCCTTGCTGCCGTCCTCTCAGACCCCGCTCACCCT...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCTCACAAATAGCTTCGTaGAAATATCACTTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCKPVCLWLQVMRAALQASQIAS*KYHFCF Trigger: GAAGCAAAAGTGATATTTGCACGAAGCTATTTGTGA...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTCAGATCCTCGTAGGTaGTTTTTATCTTCTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QWMDLWTAVPWSLQASVSSDPRR*FLSSQL Trigger: CAACTGAGAAGATAAAAATCACCTACGAGGATCTGA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGAGAAGCCACACTGGGTaGCGTGGCTCTTGGCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRRSHTG*RGSWRS Trigger: GGATCGCCAAGAGCCACGGCACCCAGTGTGGCTTCT...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCTTCAGGTCTGCACTTaGCAACCCAGCAAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNLQVCT*QPSKKM Trigger: CATTTTCTTGCTGGGTTGGCAAGTGCAGACCTGAAG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCCACGAAAAGCTGTATTaGATGGTAAGTTTGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVDGLVDSCTLVPASQCVHEKLY*MVSLSC Trigger: GCATGACAAACTTACCATCCAATACAGCTTTTCGTG...GACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCCTAATCTTTTCTGGTaGAAGCCCACATTTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNPNLFW*KPTFGC Trigger: GCAGCCAAATGTGGGCTTCCACCAGAAAAGATTAGG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTAGGTTTAAACGTTTTTaGGTCATCTCTCGGGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDLWTAVPWSLQASVSVARFKRF*VISRDH Trigger: ATGATCCCGAGAGATGACCCAAAAACGTTTAAACCT...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACCCACTCTTGTCCTTCTaGTGTGAAAGGAAGACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNPLLSF*CERKTC Trigger: ACAAGTCTTCCTTTCACATCAGAAGGACAAGAGTGG...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGCATTCCTTGAATAAATaGACCTTCGATCTGCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQHSLNK*TFDLPN Trigger: ATTGGGCAGATCGAAGGTGCATTTATTCAAGGAATG...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACATGAGTCGATTGATATaGTTCTTGCATGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNMSRLI*FLHELW Trigger: CCAGAGCTCATGCAAGAATCATATCAATCGACTCAT...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGGTCCTTGAGACTTCATaGCTGGTCCCAGGGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRVLETS*LVPGLC Trigger: ACACAGCCCTGGGACCAGCCATGAAGTCTCAAGGAC...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCACCCACTCTGGGGTTaGTGGGCTCTTCACTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYHPLWG*WALHCE Trigger: TTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTG...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATAGCACCAAGAGTTCTTaGAGGGTTCCTGGGGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYSTKSS*RVPGAI Trigger: GATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCT...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGACGCTTGCTTGTAGATaGTTTTATCAACTGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQTLACR*FYQLFC Trigger: ACAAAACAGTTGATAAAACCATCTACAAGCAAGCGT...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATTGGCTGCCACAGCTGTaGTGCAGGATTCTGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYWLPQL*CRILLP Trigger: TGGTAACAGAATCCTGCATCACAGCTGTGGCAGCCA...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGGTTCTGATTTTCTTGTaGGCACCTGTCAGGCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRVLIFL*APVRQS Trigger: CGACTGCCTGACAGGTGCTCACAAGAAAATCAGAAC...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | AAAAATGGCGTCTGCACACCAGGTCTCCTTTCCTTTCCCTCCATCTGCAGCAACTGCAAATATCACTTTTaGTTCCCGATGAGTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNGVCTPGLLSFPSICSNCKYHF*FPMSHF Trigger: AAAGTGACTCATCGGGAAGCAAAAGTGATATTTGCA...GTTGCTGCAGATGGAGGGAAAGGAAAGGAGACCTGGTGTGCAGACGCCATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAACACCGGATCGTGTTGTaGCACCATCACTGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKHRIVL*HHHCAG Trigger: GCCTGCACAGTGATGGTGTCACAACACGATCCGGTG...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCAATCAGAGTCCTCCTaGATTCCACTTTGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYQSESS*IPLCLP Trigger: TGGGAGGCAAAGTGGAATTCAGGAGGACTCTGATTG...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGGCTCTGGGACATCAGTaGCAGTTGGGATTTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRALGHQ*QLGFCT Trigger: AGTACAAAATCCCAACTGTCACTGATGTCCCAGAGC...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCATCCTCAGGAGTTCTaGGGGAAATATGAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYHPQEF*GKYELL Trigger: CAGGAGCTCATATTTCCCCCAGAACTCCTGAGGATG...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATTTTCTGTACGTGGGCTaGGTCCTGTGTGGACACATA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYFLYVG*VLCGHI Trigger: TATGTGTCCACACAGGACCCAGCCCACGTACAGAAA...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGGAAGGCCAGCAGAGTaGCTTCTGGGTCCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKGRPAE*LLGPHS Trigger: AGAATGTGGACCCAGAAGTCACTCTGCTGGCCTTCC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGACCTGACAGGTGCATaGTGGGACGTCCAACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKDLTGA*WDVQLD Trigger: ATCCAGTTGGACGTCCCATCATGCACCTGTCAGGTC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGGATATGATTCTTGCATaGGCTCTGGTACTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRDMILA*ALVLVT Trigger: AGTCACCAGTACCAGAGCTCATGCAAGAATCATATC...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGATTCAGGCTGCAACATaGATCCATGACAATGTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRIQAAT*IHDNVG Trigger: ACCGACATTGTCATGGATGCATGTTGCAGCCTGAAT...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAACCGCTTCTGAGAGTGTaGGATGTACACAGACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKPLLRV*DVHRPQ Trigger: CTGGGGTCTGTGTACATCCCACACTCTCAGAAGCGG...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCCCTAATCTTTTCTaGTGGAAGCCCACATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYLPNLF*WKPTFG Trigger: GCCAAATGTGGGCTTCCACCAGAAAAGATTAGGGAG...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGGCATGTTTAAGACCTaGCAGGTGCATGATGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKGMFKT*QVHDGT Trigger: CGTCCCATCATGCACCTGTCAGGTCTTAAACATGCC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGTGGGAGCTCAGAGATaGTCTCAGCCAAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKVGAQR*SQPRCP Trigger: AGGACATCTTGGCTGAGAGCATCTCTGAGCTCCCAC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATAAGGACACGTTAAACTaGTCTGGGACATCAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYKDTLN*SGTSVT Trigger: TGTCACTGATGTCCCAGAGCAGTTTAACGTGTCCTT...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGTTCACCATTGTTGCCTaGAATGTCTTCAGCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PVRSKKLAFHLGTKISLRFTIVA*NVFSCY Trigger: ATAACAGCTGAAGACATTCCAGGCAACAATGGTGAA...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATTTCAACCTCAGAACATaGAGCTCCATAGACATAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYFNLRT*SSIDIV Trigger: TACTATGTCTATGGAGCTGCATGTTCTGAGGTTGAA...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGACATCAGTGACAGTTaGGATTTTGTACTTGTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKDISDS*DFVLVR Trigger: CCGGACAAGTACAAAATCCCAACTGTCACTGATGTC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAATTTTATCTTCTCAGTTaGTCGTTTTGCCTGAACATC | + |
|
Preference number: 4 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKFYLLS*SFCLNI Trigger: GATGTTCAGGCAAAACGAGCAACTGAGAAGATAAAA...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| 3UTR CAA 72 bp | TTTGTAAGATGCCTCATCTCTCTAATGTGGTTAGATTaGAATAGTGATTCTAAATTTTGTGACAAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVRCLISLMWLD*NSDSKFCDKAH Trigger: GTGAGCCTTGTCACAAAATTTAGAATCACTATTCAAATCTAACCACATTAGAGAGATGAGGCATCTTACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GCCTCGTCTAGCATCAGTGCGTTCCAGCGCCGGCCCAGAAGCTGCTaGCAGGACCTTTGTGCGCTGACGGTGGTGGGCCCCACCCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSSISAFQRRPRSC*QDLCALTVVGPTPP Trigger: TGGAGGGGTGGGGCCCACCACCGTCAGCGCACAAAGGTCCTGCCAGCAGCTTCTGGGCCGGCGCTGGAACGCACTGATGCTAGACGAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | CCACACTGGGTGCCGTGGCTCTTGGCGATCCTCTCCTGCACGGGGTaGAGCCTGGTCTTGATGCTTCCCACACCTTCCACGGTGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PHWVPWLLAILSCTG*SLVLMLPTPSTVVT Trigger: TGTCACCACCGTGGAAGGTGTGGGAAGCATCAAGACCAGGCTCCACCCCGTGCAGGAGAGGATCGCCAAGAGCCACGGCACCCAGTGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | CACAGGCCATCCGCACCCACTCTGGGGTTGCTGGGCTCTTCACTGTaGAGTCCTCCGCTATGTCTCTTTGTCTCCGTGCCGCAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: HRPSAPTLGLLGSSL*SPPLCLFVSVPQPP Trigger: CGGTGGCTGCGGCACGGAGACAAAGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCAGCACCAAGAGTTCTaGGAGGGTTCCTGGGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PCKPVCLWLQVMRAALQAQHQEF*EGSWGD Trigger: ATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTGGTCCCAGGGCTGTGTaGCCCGAGATGAGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: YPGPCKPVCLWLQVMRAAGPRAV*PEMRGA Trigger: AGCTCCTCTCATCTCGGGCAACACAGCCCTGGGACC...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | ACAGCGGCAGAGGTTCCCTCCCAAGGCCTCCATGAGCTGTTCCTCTaGGGGCTGCGGGTGGTTCCTGAGCAGTGTGTAGATGGACATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAAEVPSQGLHELFL*GLRVVPEQCVDGHH Trigger: GTGATGTCCATCTACACACTGCTCAGGAACCACCCGCAGCCCTCAGAGGAACAGCTCATGGAGGCCTTGGGAGGGAACCTCTGCCGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTGGGTGCCGTGGCTCTaGGCGATCCTCTCCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQWVPWL*AILSCT Trigger: CGTGCAGGAGAGGATCGCCAAGAGCCACGGCACCCA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | CGTGAACCGATCTGCACAGGCCATCCGCACCCACTCTGGGGTTGCTaGGCTCTTCACTGTGAAGTCCTCCGCTATGTCTCTTTGTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: REPICTGHPHPLWGC*ALHCEVLRYVSLSP Trigger: CGGAGACAAAGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTGCAGATCGGTTCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | CTGTTCCTTTCTGTGGACAACCGTCTGGCTCCATGCAGAAGGTCCTaGCGCTCTCCAGAATTGGCCGATACCCAGTACAGCGGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLSVDNRLAPCRRS*RSPELADTQYSGRG Trigger: ACCTCTGCCGCTGTACTGGGTATCGGCCAATTCTGGAGAGCGGCAGGACCTTCTGCATGGAGCCAGACGGTTGTCCACAGAAAGGAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | GTTCCGGATCTGCTGTCCCGCCAAGCTCCGGAGGTGTTTCAGGAGTaGTCGGTAGGTCTGAGTTTTCTCCTGTGGGAGCTCAGAGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPDLLSRQAPEVFQE*SVGLSFLLWELRDA Trigger: AGCATCTCTGAGCTCCCACAGGAGAAAACTCAGACCTACCGAGCACTCCTGAAACACCTCCGGAGCTTGGCGGGACAGCAGATCCGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | GTCCGTGAACCGATCTGCACAGGCCATCCGCACCCACTCTGGGGTTaGTGGGCTCTTCACTGTGAAGTCCTCCGCTATGTCTCTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VREPICTGHPHPLWG*WALHCEVLRYVSLS Trigger: AGACAAAGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTGCAGATCGGTTCACGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GATCATGTCCGTGAACCGATCTGCACAGGCCATCCGCACCCACTCTaGGGTTGCTGGGCTCTTCACTGTGAAGTCCTCCGCTATGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DHVREPICTGHPHPL*GCWALHCEVLRYVS Trigger: AGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTGCAGATCGGTTCACGGACATGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTCTCCTGAATTCCACTTaGCCTCCCAGGGCTGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MDLWTAVPWSLQASVSVALLNST*PPRAEP Trigger: AGGCTCAGCCCTGGGAGGCAAAGTGGAATTCAGGAG...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGGTGGAAGCCCACATTaGGCTGCCACAGCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QWMDLWTAVPWSLQASVSGGSPH*AATAVM Trigger: CATCACAGCTGTGGCAGCCAAATGTGGGCTTCCACC...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTCCTTGCCCCAGTTCATaGCCTCCATGTGCCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: MDLWTAVPWSLQASVSVAPCPSS*PPCATN Trigger: GTTGGTGGCACATGGAGGCAATGAACTGGGGCAAGG...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GAGCGGGGTCTGAGAGGACGGCAGCAAGGACACGTTAAACTGCTCTaGGACATCAGTGACAGTTGGGATTTTGTACTTGTCCGGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ERGLRGRQQGHVKLL*DISDSWDFVLVRAP Trigger: CGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTGTCCTTGCTGCCGTCCTCTCAGACCCCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCTCCTCTTCACCATTGTaGCCTGGAATGTCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCKPVCLWLQVMRAALQASSSPL*PGMSSA Trigger: AGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGA...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | GCTTCTCTGGGTTCTCAGCCATCCTCAGGAGTTCTGGGGGAAATATaGGCTCCTGGGTCGGGTCCAAGGGCTGGAACTCGTCTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: ASLGSQPSSGVLGEI*APGSGPRAGTRLSQ Trigger: TTGTGAAAGACGAGTTCCAGCCCTTGGACCCGACCCAGGAGCTCATATTTCCCCCAGAACTCCTGAGGATGGCTGAGAACCCAGAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | AGCAACACTGTCCTGTTCCTTTCTGTGGACAACCGTCTGGCTCCATaGAGAAGGTCCTGCCGCTCTCCAGAATTGGCCGATACCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SNTVLFLSVDNRLAP*RRSCRSPELADTQY Trigger: GTACTGGGTATCGGCCAATTCTGGAGAGCGGCAGGACCTTCTGCATGGAGCCAGACGGTTGTCCACAGAAAGGAACAGGACAGTGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | TCTGCACTTGCCAACCCAGCAAGAAAATGTCCACTGAGGGGAATCTaGCGCGGGCCTTCTTCTGACAGCAGATTGAGTGTGGTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SALANPARKCPLRGI*RGPSSDSRLSVVLP Trigger: GGGCAACACCACACTCAATCTGCTGTCAGAAGAAGGCCCGCGGCAGATTCCCCTCAGTGGACATTTTCTTGCTGGGTTGGCAAGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | CGGCAGCAAGGACACGTTAAACTGCTCTGGGACATCAGTGACAGTTaGGATTTTGTACTTGTCCGGGCTCCGAGAGTACAGGACGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQQGHVKLLWDISDS*DFVLVRAPRVQDAL Trigger: GAGGGCGTCCTGTACTCTCGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTGTCCTTGCTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTACGTCCAACTGGATCTaGGAGAGGTTGGTGAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: YPGPCKPVCLWLQVMRAATSNWI*ERLVRI Trigger: GATTCTCACCAACCTCTCCAAGATCCAGTTGGACGT...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCGTCAGGGTTGAACGCTaGCTTGTAGATGGTTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PCKPVCLWLQVMRAALQAVRVER*LVDGFI Trigger: GATAAAACCATCTACAAGCAAGCGTTCAACCCTGAC...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | GGTGAGAATCTACTCTCTGGTATGTTTGGACTCCCCGGGGTAGCGTaGCCTGGAAATCTCCCAGAGAGCTTAGGAACCGGTCTGCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: GENLLSGMFGLPGVA*PGNLPESLGTGLRS Trigger: AGATCGCAGACCGGTTCCTAAGCTCTCTGGGAGATTTCCAGGTCACGCTACCCCGGGGAGTCCAAACATACCAGAGAGTAGATTCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | GACAGGTGCATGATGGGACGTCCAACTGGATCTTGGAGAGGTTGGTaGGAATCTACTCTCTGGTATGTTTGGACTCCCCGGGGTAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: DRCMMGRPTGSWRGW*ESTLWYVWTPRGSV Trigger: CACGCTACCCCGGGGAGTCCAAACATACCAGAGAGTAGATTCTCACCAACCTCTCCAAGATCCAGTTGGACGTCCCATCATGCACCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | TATCATCTTCACGATCCAGAACAAGACGAATGGGATGGCCAGTTTTaGCAGCCCCCACCGCAGCAATTGCTCCGAACACAGCTGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YHLHDPEQDEWDGQF*QPPPQQLLRTQLAS Trigger: GGAGGCCAGCTGTGTTCGGAGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTGAAGATGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | CTGATCCAAGCAACACTGTCCTGTTCCTTTCTGTGGACAACCGTCTaGCTCCATGCAGAAGGTCCTGCCGCTCTCCAGAATTGGCCGATA | + |
|
Preference number: 5 (lower is better) Translates to: LIQATLSCSFLWTTV*LHAEGPAALQNWPI Trigger: TATCGGCCAATTCTGGAGAGCGGCAGGACCTTCTGCATGGAGCCAGACGGTTGTCCACAGAAAGGAACAGGACAGTGTTGCTTGGATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GGGTTCTCAGCCATCCTCAGGAGTTCTGGGGGAAATATGAGCTCCTaGGTCGGGTCCAAGGGCTGGAACTCGTCTTTCACAAATAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFSAILRSSGGNMSS*VGSKGWNSSFTNSF Trigger: GAAGCTATTTGTGAAAGACGAGTTCCAGCCCTTGGACCCGACCCAGGAGCTCATATTTCCCCCAGAACTCCTGAGGATGGCTGAGAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GAATCTACTCTCTGGTATGTTTGGACTCCCCGGGGTAGCGTGACCTaGAAATCTCCCAGAGAGCTTAGGAACCGGTCTGCGATCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESTLWYVWTPRGSVT*KSPRELRNRSAISG Trigger: TCCAGAGATCGCAGACCGGTTCCTAAGCTCTCTGGGAGATTTCCAGGTCACGCTACCCCGGGGAGTCCAAACATACCAGAGAGTAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGAGATTGAGTGTGGTGTaGCCCACAGAGAGGATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVRLSVV*PTERIG Trigger: TCCTATCCTCTCTGTGGGCAACACCACACTCAATCT...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTCTTCTGACAGCAGATaGAGTGTGGTGTTGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: QWMDLWTAVPWSLQASVSSSDSR*SVVLPT Trigger: TGTGGGCAACACCACACTCAATCTGCTGTCAGAAGA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTCTGCACTaGCCAACCCAGCAAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVASGLH*PTQQEN Trigger: ATTTTCTTGCTGGGTTGGCAAGTGCAGACCTGAAGC...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTCCAGGCCCCACGAAAAGCTGTATaGGATGGTAAGTTTGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: PCKPVCLWLQVMRAALQAPRKAV*DGKFVM Trigger: CATGACAAACTTACCATCCAATACAGCTTTTCGTGG...GGCCTGGAGAGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | GACGAGCGCAGCCGCCTGATGGTAGCTTGTCGCAGCAAAGCCAACTaGAAACTTCATGGGGACAATAGCAATGCCTCGCTTCTTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DERSRLMVACRSKAN*KLHGDNSNASLLPV Trigger: TACTGGAAGAAGCGAGGCATTGCTATTGTCCCCATGAAGTTTTCAGTTGGCTTTGCTGCGACAAGCTACCATCAGGCGGCTGCGCTCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAATGTCTAGGGCTTaGATCCGTCCACTGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: MDLWTAVPWSLQASVSVASMSRA*IRPLFM Trigger: CATGAACAGTGGACGGATCAAAGCCCTAGACATTGA...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTATTGGATGGTAAGTTaGTCATGCAGGCACGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: QWMDLWTAVPWSLQASVSYWMVS*SCRHDL Trigger: GAGGTCGTGCCTGCATGACAAACTTACCATCCAATA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGACGTTTGAGAAGGATTaGACAGGCATTCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVTFEKD*TGILHS Trigger: GCTGTGCAGAATGCCTGTCAAATCCTTCTCAAACGT...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | AGCAAGAAAATGTCCACTGAGGGGAATCTGCCGCGGGCCTTCTTCTaGCAGCAGATTGAGTGTGGTGTTGCCCACAGAGAGGATAGGATT | + |
|
Preference number: 5 (lower is better) Translates to: SKKMSTEGNLPRAFF*QQIECGVAHREDRI Trigger: AATCCTATCCTCTCTGTGGGCAACACCACACTCAATCTGCTGTCAGAAGAAGGCCCGCGGCAGATTCCCCTCAGTGGACATTTTCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTGGATCTTGGAGAGGTaGGTGAGAATCTACTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQWILER*VRIYSL Trigger: CAGAGAGTAGATTCTCACCAACCTCTCCAAGATCCA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTTCATCCTCTTCACCATaGTTGCCTGGAATGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QWMDLWTAVPWSLQASVSSSSSP*LPGMSS Trigger: TGAAGACATTCCAGGCAACAATGGTGAAGAGGATGA...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGTCTACAGCCAGCAATTaGTCATCCTCTTCACCATTG | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVSTASN*SSSSPL Trigger: CAATGGTGAAGAGGATGACAAATTGCTGGCTGTAGA...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CAGTGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTCATGTAGAAGTGTTCTaGTCCTCCAACATGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QWMDLWTAVPWSLQASVSHVEVF*SSNMDC Trigger: ACAGTCCATGTTGGAGGACAAGAACACTTCTACATG...AGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | ATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTGCTGTAGCGATTGTATaGGGCACTGTTGTTGTACTT | + |
|
Preference number: 5 (lower is better) Translates to: MDLWTAVPWSLQASVSVAAVAIV*GTVVVL Trigger: AAGTACAACAACAGTGCCCAATACAATCGCTACAGC...AGCCACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | CTTTCAGCACCAAGAGTTCTTGGAGGGTTCCTGGGGCGATCCAGGTaGTTCTCTCTCCATAAAAGGTTAGGGTTTGCTTCTCTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSAPRVLGGFLGRSR*FSLHKRLGFASLGS Trigger: AGAACCCAGAGAAGCAAACCCTAACCTTTTATGGAGAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGGTGCAAATATCACTTTaGCTTCCCGATGAGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQVQISL*LPDESL Trigger: AAGTGACTCATCGGGAAGCAAAAGTGATATTTGCAC...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGTACATGTCTAGCTCTTaGTCTTCTGTCTTCGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVYMSSS*SSVFGI Trigger: TATTCCGAAGACAGAAGACAAAGAGCTAGACATGTA...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGGCTTCAGGTGATGAGGGCTGCTCTGAGGTTTCGGATTTaGTATGCATTTTCCAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YPGPCKPVCLWLQVMRAALRFRI*YAFSSF Trigger: AAAACTGGAAAATGCATACAAAATCCGAAACCTCAG...AGCAGCCCTCATCACCTGAAGCCACAGACACACTGGCTTGCAGGGACCAGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACTTGTGGACAGCTGTACCCTGGTCCCTGCAAGCCAGTGTGTCTGTGTTGTATTGGGCACTGTaGTTGTACTTGTTTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WMDLWTAVPWSLQASVSVLYWAL*LYLFHR Trigger: TCTGTGAAACAAGTACAACAACAGTGCCCAATACAA...CACAGACACACTGGCTTGCAGGGACCAGGGTACAGCTGTCCACAAGTCCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | TTTCAGATCCTCGTAGGTGATTTTTATCTTCTCAGTTGCTCGTTTTaGCTGAACATCAGTCTCTGCCACCACGGCACAGATGACCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQILVGDFYLLSCSF*LNISLCHHGTDDLA Trigger: GGCCAGGTCATCTGTGCCGTGGTGGCAGAGACTGATGTTCAGGCAAAACGAGCAACTGAGAAGATAAAAATCACCTACGAGGATCTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | AGGAGTTCTGGGGGAAATATGAGCTCCTGGGTCGGGTCCAAGGGCTaGAACTCGTCTTTCACAAATAGCTTCGTGCAAATATCACTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSGGNMSSWVGSKG*NSSFTNSFVQISLL Trigger: CAAAAGTGATATTTGCACGAAGCTATTTGTGAAAGACGAGTTCCAGCCCTTGGACCCGACCCAGGAGCTCATATTTCCCCCAGAACTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | GTTATTAGCATATCATCTTCACGATCCAGAACAAGACGAATGGGATaGCCAGTTTTGACAGCCCCCACCGCAGCAATTGCTCCGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: VISISSSRSRTRRMG*PVLTAPTAAIAPNT Trigger: TGTGTTCGGAGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTGAAGATGATATGCTAATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCTTTCTCCTATGCTTGCTTCTCCTGGACTCCTGTGGCCAGGGAACCTCTCAGTTTTTATCTTCTCAGTaGCTCGTTTTGCCTGAACAT | + |
|
Preference number: 5 (lower is better) Translates to: SFLLCLLLLDSCGQGTSQFLSSQ*LVLPEH Trigger: ATGTTCAGGCAAAACGAGCAACTGAGAAGATAAAAA...CTGAGAGGTTCCCTGGCCACAGGAGTCCAGGAGAAGCAAGCATAGGAGAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TATGCAGTCCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCCGCCTGATGGTAGCTaGTCGCAGCAAAGCCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: YAVQSGVRSWLFTWVLKYPPDGS*SQQSQL Trigger: CAGTTGGCTTTGCTGCGACAAGCTACCATCAGGCGG...ATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGGACTGCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGGGGCACAGGAACGAATaGTGCTTTATGGCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PVRSKKLAFHLGTKISLRGHRNE*CFMASS Trigger: CGAGGATGCCATAAAGCACAATTCGTTCCTGTGCCC...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | TTCGTGCAAATATCACTTTTGCTTCCCGATGAGTCACTTTCCTTCTaGTCCAAGCAACACTGTCCTGTTCCTTTCTGTGGACAACCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: FVQISLLLPDESLSF*SKQHCPVPFCGQPS Trigger: AGACGGTTGTCCACAGAAAGGAACAGGACAGTGTTGCTTGGATCAGAAGGAAAGTGACTCATCGGGAAGCAAAAGTGATATTTGCACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 90 bp | GGCAGGTCAAGGACCTCAGATGAGTCGATTGATATGATTCTTGCATaGGCTCTGGTACTGGTGACTAAAGCCATGAAGAGTTCTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRSRTSDESIDMILA*ALVLVTKAMKSSLS Trigger: GGATAAAGAACTCTTCATGGCTTTAGTCACCAGTACCAGAGCTCATGCAAGAATCATATCAATCGACTCATCTGAGGTCCTTGACCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 90 bp | CTTATCTACAGCCAGCAATTTGTCATCCTCTTCACCATTGTTGCCTaGAATGTCTTCAGCTGTTATTACATCAACCACACCAGGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIYSQQFVILFTIVA*NVFSCYYINHTRQV Trigger: GACCTGCCTGGTGTGGTTGATGTAATAACAGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGATGACAAATTGCTGGCTGTAGATAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 90 bp | GAACCTTATCTACAGCCAGCAATTTGTCATCCTCTTCACCATTGTTaGCTGGAATGTCTTCAGCTGTTATTACATCAACCACACCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPYLQPAICHPLHHC*LECLQLLLHQPHQA Trigger: TGCCTGGTGTGGTTGATGTAATAACAGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGATGACAAATTGCTGGCTGTAGATAAGGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAGTTGGGATTTTGTACTaGTCCGGGCTCCGAGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKVGILY*SGLREY Trigger: GTACTCTCGGAGCCCGGACAAGTACAAAATCCCAAC...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | CCAGTCAGGAGTAAGAAGCTGGCTTTTCACTTGGGTACTAAAATATCTCTTAGGATAAAGGCCCATTCCTaGAATAAATGCACCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVRSKKLAFHLGTKISLRIKAHS*NKCTFD Trigger: ATCGAAGGTGCATTTATTCAAGGAATGGGCCTTTAT...CCTAAGAGATATTTTAGTACCCAAGTGAAAAGCCAGCTTCTTACTCCTGACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS-3UTR CAA 90 bp | TCCCTCCATCTGCAGCAACATTTACTCAGTGTTTTCAAAGACAAATCATTAAAAATCCCACTTTGTATTTaGCAAATAATGGGTGTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLHLQQHLLSVFKDKSLKIPLCI*QIMGVV Trigger: GACGACACCCATTATTTGCAAAATACAAAGTGGGAT...TTTTAATGATTTGTCTTTGAAAACACTGAGTAAATGTTGCTGCAGATGGAGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | GCCGGCCCAGAAGCTGCTGGCAGGACCTTTGTGCGCTaGCGGTGGTGGGCCCCACCCCTCCATAGGCAATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGPEAAGRTFVR*RWWAPPLHRQC Trigger: GCATTGCCTATGGAGGGGTGGGGCCCACCACCGTCAGCGCACAAAGGTCCTGCCAGCAGCTTCTGGGCCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | AGCATCAGTGCGTTCCAGCGCCGGCCCAGAAGCTGCTaGCAGGACCTTTGTGCGCTGACGGTGGTGGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SISAFQRRPRSC*QDLCALTVVGP Trigger: GGGGCCCACCACCGTCAGCGCACAAAGGTCCTGCCAGCAGCTTCTGGGCCGGCGCTGGAACGCACTGATGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GTGCCGTGGCTCTTGGCGATCCTCTCCTGCACGGGGTaGAGCCTGGTCTTGATGCTTCCCACACCTTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: VPWLLAILSCTG*SLVLMLPTPST Trigger: CGTGGAAGGTGTGGGAAGCATCAAGACCAGGCTCCACCCCGTGCAGGAGAGGATCGCCAAGAGCCACGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TCCCAGACTCCCCGAGGCCCTTTGACGAATAGAGGGTaGGCGGGGTCTGAGAGGACGGCAGCAAGGACACGT | + |
|
Preference number: 6 (lower is better) Translates to: SQTPRGPLTNRG*AGSERTAARTR Trigger: ACGTGTCCTTGCTGCCGTCCTCTCAGACCCCGCTCACCCTCTATTCGTCAAAGGGCCTCGGGGAGTCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | CGTGAACCGATCTGCACAGGCCATCCGCACCCACTCTaGGGTTGCTGGGCTCTTCACTGTGAAGTCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: REPICTGHPHPL*GCWALHCEVLR Trigger: GCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTGCAGATCGGTTCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | CCGATCTGCACAGGCCATCCGCACCCACTCTGGGGTTaGTGGGCTCTTCACTGTGAAGTCCTCCGCTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: PICTGHPHPLWG*WALHCEVLRYV Trigger: GACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGATGGCCTGTGCAGATCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TTGGCGATCCTCTCCTGCACGGGGTGGAGCCTGGTCTaGATGCTTCCCACACCTTCCACGGTGGTGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAILSCTGWSLV*MLPTPSTVVTA Trigger: TGCTGTCACCACCGTGGAAGGTGTGGGAAGCATCAAGACCAGGCTCCACCCCGTGCAGGAGAGGATCGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | CCCCATGCAGGGAGCACAGGGGCACCAGGCATGCCATaGCGGAGAAGTGTCTTGTCTTCTTGCACACCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PHAGSTGAPGMP*RRSVLSSCTPD Trigger: ATCCGGTGTGCAAGAAGACAAGACACTTCTCCGTCATGGCATGCCTGGTGCCCCTGTGCTCCCTGCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | GAGGTTCCCTCCCAAGGCCTCCATGAGCTGTTCCTCTaGGGGCTGCGGGTGGTTCCTGAGCAGTGTGTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: EVPSQGLHELFL*GLRVVPEQCVD Trigger: ATCTACACACTGCTCAGGAACCACCCGCAGCCCTCAGAGGAACAGCTCATGGAGGCCTTGGGAGGGAACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TCCGCACCCACTCTGGGGTTGCTGGGCTCTTCACTGTaGAGTCCTCCGCTATGTCTCTTTGTCTCCGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SAPTLGLLGSSL*SPPLCLFVSVP Trigger: CGGCACGGAGACAAAGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCAGCAACCCCAGAGTGGGTGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | CACAGGGGCACCAGGCATGCCATGACGGAGAAGTGTCTTGTCTTCTaGCACACCGGATCGTGTTGTGACACCATCACTGTGCAGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRGTRHAMTEKCLVF*HTGSCCDTITVQAP Trigger: TGGGGCCTGCACAGTGATGGTGTCACAACACGATCCGGTGTGCAAGAAGACAAGACACTTCTCCGTCATGGCATGCCTGGTGCCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | CCGGAAGGCAGACACGAACTCCCGCTTCTGAGAGTGTaGGATGTACACAGACCCCAGAATCTCCTCGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PEGRHELPLLRV*DVHRPQNLLGL Trigger: AAGCCCGAGGAGATTCTGGGGTCTGTGTACATCCCACACTCTCAGAAGCGGGAGTTCGTGTCTGCCTTCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | CTCTGGTATGTTTGGACTCCCCGGGGTAGCGTGACCTaGAAATCTCCCAGAGAGCTTAGGAACCGGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LWYVWTPRGSVT*KSPRELRNRSA Trigger: CGCAGACCGGTTCCTAAGCTCTCTGGGAGATTTCCAGGTCACGCTACCCCGGGGAGTCCAAACATACCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | TGTCCACTGAGGGGAATCTGCCGCGGGCCTTCTTCTGACAGCAGATaGAGTGTGGTGTTGCCCACAGAGAGGATAGGATTCAGGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CPLRGICRGPSSDSR*SVVLPTERIGFRSE Trigger: CTCGGACCTGAATCCTATCCTCTCTGTGGGCAACACCACACTCAATCTGCTGTCAGAAGAAGGCCCGCGGCAGATTCCCCTCAGTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | GGTCTGCACTTGCCAACCCAGCAAGAAAATGTCCACTaGGGGGAATCTGCCGCGGGCCTTCTTCTGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLHLPTQQENVH*GESAAGLLLTA Trigger: TGCTGTCAGAAGAAGGCCCGCGGCAGATTCCCCTCAGTGGACATTTTCTTGCTGGGTTGGCAAGTGCAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | ACTCTCATGCCAGCATTTACATCAGGCAAGGCGTTCTaGTGGCACTGGGCCTGCCGGAAGGCAGACACGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLMPAFTSGKAF*WHWACRKADTN Trigger: GTTCGTGTCTGCCTTCCGGCAGGCCCAGTGCCATCAGAACGCCTTGCCTGATGTAAATGCTGGCATGAGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | GTCCTGTTCCTTTCTGTGGACAACCGTCTGGCTCCATaGAGAAGGTCCTGCCGCTCTCCAGAATTGGCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VLFLSVDNRLAP*RRSCRSPELAD Trigger: ATCGGCCAATTCTGGAGAGCGGCAGGACCTTCTGCATGGAGCCAGACGGTTGTCCACAGAAAGGAACAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GCCATCCTCAGGAGTTCTGGGGGAAATATGAGCTCCTaGGTCGGGTCCAAGGGCTGGAACTCGTCTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: AILRSSGGNMSS*VGSKGWNSSFT Trigger: TGTGAAAGACGAGTTCCAGCCCTTGGACCCGACCCAGGAGCTCATATTTCCCCCAGAACTCCTGAGGATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GAGGACAGGGTAAAAGTGTCCTTGAGACTTCATGGCTaGTCCCAGGGCTGTGTTGCCCGAGATGAGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: EDRVKVSLRLHG*SQGCVARDERS Trigger: GCTCCTCTCATCTCGGGCAACACAGCCCTGGGACCAGCCATGAAGTCTCAAGGACACTTTTACCCTGTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TGGGCTCTTCACTGTGAAGTCCTCCGCTATGTCTCTTaGTCTCCGTGCCGCAGCCACCGCATCAACAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: WALHCEVLRYVS*SPCRSHRINNG Trigger: GCCATTGTTGATGCGGTGGCTGCGGCACGGAGACAAAGAGACATAGCGGAGGACTTCACAGTGAAGAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | GAAGTGTCTTGTCTTCTTGCACACCGGATCGTGTTGTaGCACCATCACTGTGCAGGCCCCACAGCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EVSCLLAHRIVL*HHHCAGPTASC Trigger: ACAGGAGGCTGTGGGGCCTGCACAGTGATGGTGTCACAACACGATCCGGTGTGCAAGAAGACAAGACACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | CTACTCTCTGGTATGTTTGGACTCCCCGGGGTAGCGTaGCCTGGAAATCTCCCAGAGAGCTTAGGAACCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LLSGMFGLPGVA*PGNLPESLGTG Trigger: ACCGGTTCCTAAGCTCTCTGGGAGATTTCCAGGTCACGCTACCCCGGGGAGTCCAAACATACCAGAGAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | CACGATCCAGAACAAGACGAATGGGATGGCCAGTTTTaGCAGCCCCCACCGCAGCAATTGCTCCGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: HDPEQDEWDGQF*QPPPQQLLRTQ Trigger: CTGTGTTCGGAGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | GCCAACCCAGCAAGAAAATGTCCACTGAGGGGAATCTaGCGCGGGCCTTCTTCTGACAGCAGATTGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ANPARKCPLRGI*RGPSSDSRLSV Trigger: CACACTCAATCTGCTGTCAGAAGAAGGCCCGCGGCAGATTCCCCTCAGTGGACATTTTCTTGCTGGGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GCAACACTGTCCTGTTCCTTTCTGTGGACAACCGTCTaGCTCCATGCAGAAGGTCCTGCCGCTCTCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ATLSCSFLWTTV*LHAEGPAALQN Trigger: ATTCTGGAGAGCGGCAGGACCTTCTGCATGGAGCCAGACGGTTGTCCACAGAAAGGAACAGGACAGTGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TCTAGCAGGAGACAGGAGGACAGGGTAAAAGTGTCCTaGAGACTTCATGGCTGGTCCCAGGGCTGTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRRQEDRVKVS*RLHGWSQGCVA Trigger: GGCAACACAGCCCTGGGACCAGCCATGAAGTCTCAAGGACACTTTTACCCTGTCCTCCTGTCTCCTGCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TGCTCTGGGACATCAGTGACAGTTGGGATTTTGTACTaGTCCGGGCTCCGAGAGTACAGGACGCCCTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CSGTSVTVGILY*SGLREYRTPSG Trigger: TCCAGAGGGCGTCCTGTACTCTCGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TTGCCTGAACATCAGTCTCTGCCACCACGGCACAGATaGCCTGGCCCACACAGAGAACCTTATCTACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPEHQSLPPRHR*PGPHREPYLQP Trigger: TGGCTGTAGATAAGGTTCTCTGTGTGGGCCAGGTCATCTGTGCCGTGGTGGCAGAGACTGATGTTCAGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TCACGATCCAGAACAAGACGAATGGGATGGCCAGTTTaGACAGCCCCCACCGCAGCAATTGCTCCGAACACA | + |
|
Preference number: 6 (lower is better) Translates to: SRSRTRRMGWPV*TAPTAAIAPNT Trigger: TGTGTTCGGAGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | ATCAGGAATTCTAGCAGGAGACAGGAGGACAGGGTAAAAGTGTCCTaGAGACTTCATGGCTGGTCCCAGGGCTGTGTTGCCCGAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: IRNSSRRQEDRVKVS*RLHGWSQGCVARDE Trigger: CTCATCTCGGGCAACACAGCCCTGGGACCAGCCATGAAGTCTCAAGGACACTTTTACCCTGTCCTCCTGTCTCCTGCTAGAATTCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | ATATCATCTTCACGATCCAGAACAAGACGAATGGGATGGCCAGTTTaGACAGCCCCCACCGCAGCAATTGCTCCGAACACAGCTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISSSRSRTRRMGWPV*TAPTAAIAPNTAGL Trigger: GAGGCCAGCTGTGTTCGGAGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTGAAGATGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | AAGGACACGTTAAACTGCTCTGGGACATCAGTGACAGTTGGGATTTaGTACTTGTCCGGGCTCCGAGAGTACAGGACGCCCTCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KDTLNCSGTSVTVGI*YLSGLREYRTPSGE Trigger: CTCTCCAGAGGGCGTCCTGTACTCTCGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | CTCCCTAATCTTTTCTGGTGGAAGCCCACATTTGGCTaGCACAGCTGTGATGCAGGATTCTGTTACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPNLFWWKPTFG*HSCDAGFCYQG Trigger: GCCCTGGTAACAGAATCCTGCATCACAGCTGTGGCAGCCAAATGTGGGCTTCCACCAGAAAAGATTAGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GCTTCAGGGTACTTAGCTTTCAGCACCAAGAGTTCTTaGAGGGTTCCTGGGGCGATCCAGGTGATTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASGYLAFSTKSS*RVPGAIQVILS Trigger: AGAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTGAAAGCTAAGTACCCTGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | AGCTTCAGGGTACTTAGCTTTCAGCACCAAGAGTTCTaGGAGGGTTCCTGGGGCGATCCAGGTGATTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFRVLSFQHQEF*EGSWGDPGDSL Trigger: GAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTGAAAGCTAAGTACCCTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TTAAACTGCTCTGGGACATCAGTGACAGTTGGGATTTaGTACTTGTCCGGGCTCCGAGAGTACAGGACGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LNCSGTSVTVGI*YLSGLREYRTP Trigger: GGGCGTCCTGTACTCTCGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | ATGATGGGACGTCCAACTGGATCTTGGAGAGGTTGGTaGGAATCTACTCTCTGGTATGTTTGGACTCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: MMGRPTGSWRGW*ESTLWYVWTPR Trigger: CCGGGGAGTCCAAACATACCAGAGAGTAGATTCTCACCAACCTCTCCAAGATCCAGTTGGACGTCCCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TCTTGTCCTCCAACATGGACTGTCCCTTCAGCTACCTaGTCCACGTTCTCAAAGGCCTCCTCGATGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SCPPTWTVPSAT*STFSKASSMFP Trigger: AGGAAACATCGAGGAGGCCTTTGAGAACGTGGATCAGGTAGCTGAAGGGACAGTCCATGTTGGAGGACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | AGCCGCCTGATGGTAGCTTGTCGCAGCAAAGCCAACTaGAAACTTCATGGGGACAATAGCAATGCCTCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLMVACRSKAN*KLHGDNSNASL Trigger: AAGCGAGGCATTGCTATTGTCCCCATGAAGTTTTCAGTTGGCTTTGCTGCGACAAGCTACCATCAGGCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | GGACACGTTAAACTGCTCTGGGACATCAGTGACAGTTaGGATTTTGTACTTGTCCGGGCTCCGAGAGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: GHVKLLWDISDS*DFVLVRAPRVQ Trigger: CTGTACTCTCGGAGCCCGGACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | GATGAGAGGAGCTTCAGGGTACTTAGCTTTCAGCACCAAGAGTTCTaGGAGGGTTCCTGGGGCGATCCAGGTGATTCTCTCTCCATAAAA | + |
|
Preference number: 6 (lower is better) Translates to: DERSFRVLSFQHQEF*EGSWGDPGDSLSIK Trigger: TTTTATGGAGAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTGAAAGCTAAGTACCCTGAAGCTCCTCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | CCAAGAGTTCTTGGAGGGTTCCTGGGGCGATCCAGGTaGTTCTCTCTCCATAAAAGGTTAGGGTTTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRVLGGFLGRSR*FSLHKRLGFAS Trigger: AGAAGCAAACCCTAACCTTTTATGGAGAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TTCTTAATGACGGGCTCAAGACGTTTGAGAAGGATTTaGCAGGCATTCTGCACAGCCCTGCCGTTGACATCC | + |
|
Preference number: 6 (lower is better) Translates to: FLMTGSRRLRRI*QAFCTALPLTS Trigger: GGATGTCAACGGCAGGGCTGTGCAGAATGCCTGTCAAATCCTTCTCAAACGTCTTGAGCCCGTCATTAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | CTTAGCTTTCAGCACCAAGAGTTCTTGGAGGGTTCCTaGGGCGATCCAGGTGATTCTCTCTCCATAAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSFQHQEFLEGS*GDPGDSLSIKG Trigger: ACCTTTTATGGAGAGAGAATCACCTGGATCGCCCCAGGAACCCTCCAAGAACTCTTGGTGCTGAAAGCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | ATATCATCTTCACGATCCAGAACAAGACGAATGGGATaGCCAGTTTTGACAGCCCCCACCGCAGCAATTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ISSSRSRTRRMG*PVLTAPTAAIA Trigger: AGCAATTGCTGCGGTGGGGGCTGTCAAAACTGGCCATCCCATTCGTCTTGTTCTGGATCGTGAAGATGATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | CTGAGAGGACGGCAGCAAGGACACGTTAAACTGCTCTaGGACATCAGTGACAGTTGGGATTTTGTACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRGRQQGHVKLL*DISDSWDFVLV Trigger: GACAAGTACAAAATCCCAACTGTCACTGATGTCCCAGAGCAGTTTAACGTGTCCTTGCTGCCGTCCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | GTGCATGATGGGACGTCCAACTGGATCTTGGAGAGGTaGGTGAGAATCTACTCTCTGGTATGTTTGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VHDGTSNWILER*VRIYSLVCLDS Trigger: GGAGTCCAAACATACCAGAGAGTAGATTCTCACCAACCTCTCCAAGATCCAGTTGGACGTCCCATCATGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | TTGTACATGTTTTTCTCCCTAATCTTTTCTGGTGGAAGCCCACATTaGGCTGCCACAGCTGTGATGCAGGATTCTGTTACCAGGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LYMFFSLIFSGGSPH*AATAVMQDSVTRAP Trigger: GGGAGCCCTGGTAACAGAATCCTGCATCACAGCTGTGGCAGCCAAATGTGGGCTTCCACCAGAAAAGATTAGGGAGAAAAACATGTACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TTTCTTAATGACGGGCTCAAGACGTTTGAGAAGGATTaGACAGGCATTCTGCACAGCCCTGCCGTTGACATC | + |
|
Preference number: 6 (lower is better) Translates to: FLNDGLKTFEKD*TGILHSPAVDI Trigger: GATGTCAACGGCAGGGCTGTGCAGAATGCCTGTCAAATCCTTCTCAAACGTCTTGAGCCCGTCATTAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | CAGATGACCTGGCCCACACAGAGAACCTTATCTACAGCCAGCAATTaGTCATCCTCTTCACCATTGTTGCCTGGAATGTCTTCAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QMTWPTQRTLSTASN*SSSSPLLPGMSSAV Trigger: AACAGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGATGACAAATTGCTGGCTGTAGATAAGGTTCTCTGTGTGGGCCAGGTCATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | CTCGTAGGTGATTTTTATCTTCTCAGTTGCTCGTTTTaGCTGAACATCAGTCTCTGCCACCACGGCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LVGDFYLLSCSF*LNISLCHHGTD Trigger: ATCTGTGCCGTGGTGGCAGAGACTGATGTTCAGGCAAAACGAGCAACTGAGAAGATAAAAATCACCTACGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | AACAAGCACTCTCTGTGTTTCCATGTAGAAGTGTTCTaGTCCTCCAACATGGACTGTCCCTTCAGCTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: NKHSLCFHVEVF*SSNMDCPFSYL Trigger: CAGGTAGCTGAAGGGACAGTCCATGTTGGAGGACAAGAACACTTCTACATGGAAACACAGAGAGTGCTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | TTTTTCTCCCTAATCTTTTCTGGTGGAAGCCCACATTaGGCTGCCACAGCTGTGATGCAGGATTCTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: FFSLIFSGGSPH*AATAVMQDSVT Trigger: GGTAACAGAATCCTGCATCACAGCTGTGGCAGCCAAATGTGGGCTTCCACCAGAAAAGATTAGGGAGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 72 bp | AGGGCTTTGATCCGTCCACTGTTCATGAATCCCACTTaGTATTTTGCAAATAATGGGTGTCGTCCCCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RALIRPLFMNPT*YFANNGCRPPV Trigger: AACTGGGGGACGACACCCATTATTTGCAAAATACAAAGTGGGATTCATGAACAGTGGACGGATCAAAGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | ATATCACTTTTGCTTCCCGATGAGTCACTTTCCTTCTaGTCCAAGCAACACTGTCCTGTTCCTTTCTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ISLLLPDESLSF*SKQHCPVPFCG Trigger: TCCACAGAAAGGAACAGGACAGTGTTGCTTGGATCAGAAGGAAAGTGACTCATCGGGAAGCAAAAGTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | AGGACCTCAGATGAGTCGATTGATATGATTCTTGCATaGGCTCTGGTACTGGTGACTAAAGCCATGAAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RTSDESIDMILA*ALVLVTKAMKS Trigger: ACTCTTCATGGCTTTAGTCACCAGTACCAGAGCTCATGCAAGAATCATATCAATCGACTCATCTGAGGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | GACACTCATTCCAACACCTTATCAGGGGGTCAGGGTTaGACGCTTGCTTGTAGATGGTTTTATCAACTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: DTHSNTLSGGQG*TLACRWFYQLF Trigger: AAACAGTTGATAAAACCATCTACAAGCAAGCGTTCAACCCTGACCCCCTGATAAGGTGTTGGAATGAGTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | CCAAGGGCTGGAACTCGTCTTTCACAAATAGCTTCGTaGAAATATCACTTTTGCTTCCCGATGAGTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: PRAGTRLSQIAS*KYHFCFPMSHF Trigger: AAAGTGACTCATCGGGAAGCAAAAGTGATATTTGCACGAAGCTATTTGTGAAAGACGAGTTCCAGCCCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS GCA 72 bp | TTTCAGATCCTCGTAGGTGATTTTTATCTTCTCAGTTaGTCGTTTTGCCTGAACATCAGTCTCTGCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: FQILVGDFYLLS*SFCLNISLCHH Trigger: GTGGTGGCAGAGACTGATGTTCAGGCAAAACGAGCAACTGAGAAGATAAAAATCACCTACGAGGATCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | AGCCAGCAATTTGTCATCCTCTTCACCATTGTTGCCTaGAATGTCTTCAGCTGTTATTACATCAACCACACC | + |
|
Preference number: 6 (lower is better) Translates to: SQQFVILFTIVA*NVFSCYYINHT Trigger: GGTGTGGTTGATGTAATAACAGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGATGACAAATTGCTGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CAA 90 bp | CAGAGAACCTTATCTACAGCCAGCAATTTGTCATCCTCTTCACCATaGTTGCCTGGAATGTCTTCAGCTGTTATTACATCAACCACACCA | + |
|
Preference number: 6 (lower is better) Translates to: QRTLSTASNLSSSSP*LPGMSSAVITSTTP Trigger: TGGTGTGGTTGATGTAATAACAGCTGAAGACATTCCAGGCAACAATGGTGAAGAGGATGACAAATTGCTGGCTGTAGATAAGGTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS TCA 72 bp | TTCTTATTGAACTCGTCCACTCTTGTCCTTCTGATGTaGAAGGAAGACTTGTCCAGACACTCATTCCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: FLLNSSTLVLLM*KEDLSRHSFQH Trigger: GTGTTGGAATGAGTGTCTGGACAAGTCTTCCTTTCACATCAGAAGGACAAGAGTGGACGAGTTCAATAAGAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||
| CDS CCA 72 bp | TTAAGCTATAGGTATAGACCAAGGTTTAAACGTTTTTaGGTCATCTCTCGGGATCATGTCCGTGAACCGATC | + |
|
Preference number: 6 (lower is better) Translates to: LSYRYRPRFKRF*VISRDHVREPI Trigger: GATCGGTTCACGGACATGATCCCGAGAGATGACCCAAAAACGTTTAAACCTTGGTCTATACCTATAGCTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114366.3 |
||