Pregenerated sensors for AOC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019326Ensembl transcript IDs: ENSMUST00000017316.7, ENSMUST00000103105.10
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGCAGGGCTACCGCAGGGACAAGCCCTACTCCTTCCTGATATGTaGCGAACGTTAGGAGATAGAAAAGCCTGGTCCTCTCCCATGAGG | + |
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Preference number: 1 (lower is better) Translates to: KAGLPQGQALLLPDM*RTLGDRKAWSSPMR Trigger: CCTCATGGGAGAGGACCAGGCTTTTCTATCTCCTAACGTTCGTCACATATCAGGAAGGAGTAGGGCTTGTCCCTGCGGTAGCCCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR TCA 90 bp | TTAGCTAGATTGTCCATCTTGGGGACACTTAATGGCGTGGGGAAGTaGGCACATGGTCTGAGCAGGAGCGAGGGAGGGATACTTAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: LARLSILGTLNGVGK*AHGLSRSEGGILRN Trigger: GTTTCTAAGTATCCCTCCCTCGCTCCTGCTCAGACCATGTGCTCACTTCCCCACGCCATTAAGTGTCCCCAAGATGGACAATCTAGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 90 bp | CGAACGTTAGGAGATAGAAAAGCCTGGTCCTCTCCCATGAGGCTTTaGATTACATCTTTGAGATTTCCACAGACTCGGGTCCAGGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: RTLGDRKAWSSPMRL*ITSLRFPQTRVQEK Trigger: CTTCTCCTGGACCCGAGTCTGTGGAAATCTCAAAGATGTAATGCAAAGCCTCATGGGAGAGGACCAGGCTTTTCTATCTCCTAACGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 90 bp | ATAGATTGTTGTGAGCACCTTAATAAGGATGCTGGGAACGGAATTTaGGCCCCTTGCAAGAACAGTGCACACACATCTTTCCAGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: IDCCEHLNKDAGNGI*APCKNSAHTSFQPF Trigger: GAAAGGCTGGAAAGATGTGTGTGCACTGTTCTTGCAAGGGGCCCAAATTCCGTTCCCAGCATCCTTATTAAGGTGCTCACAACAATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 90 bp | GTCTTCCTCCTCAGAGGTAACTGGTCTTACTCAGTTCTCAAGGAATaGAGCAGAAATAAACAAATGTACACTTATCGCCTACTCATTTTT | + |
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Preference number: 1 (lower is better) Translates to: VFLLRGNWSYSVLKE*SRNKQMYTYRLLIF Trigger: AAAAATGAGTAGGCGATAAGTGTACATTTGTTTATTTCTGCTGCATTCCTTGAGAACTGAGTAAGACCAGTTACCTCTGAGGAGGAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAGAGGGCAAAGCAGGGCTACCGCAGGGACAAGCCCTACTCCTTCCTGATGGACACTTAATGGCGTaGGGAAGTGAGCACATGGTC | + |
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Preference number: 2 (lower is better) Translates to: CKEGKAGLPQGQALLLPDGHLMA*GSEHMV Trigger: GACCATGTGCTCACTTCCCCACGCCATTAAGTGTCC...ATCAGGAAGGAGTAGGGCTTGTCCCTGCGGTAGCCCTGCTTTGCCCTCTTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGCAGAACCTGATTCCCTCTCAGCTGTCTTCCTCCTCAGAGGTAACTGGTCCAGGAGAAGAGACTaGAGTTTGAGAATGAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GQAEPDSLSAVFLLRGNWSRRRD*SLRMRA Trigger: AGCCCTCATTCTCAAACTGCAGTCTCTTCTCCTGGA...CCAGTTACCTCTGAGGAGGAAGACAGCTGAGAGGGAATCAGGTTCTGCCTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR CCA 90 bp | AAAATCCCTTTAGGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGCCCAGATGTGCTGGCTaGCTTTGTGGGTCAACTTGC | + |
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Preference number: 2 (lower is better) Translates to: KIPLGVWSWSLELNLGERPRCAG*LCGSTC Trigger: GCAAGTTGACCCACAAAGCCAGCCAGCACATCTGGG...CCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACCTAAAGGGATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGCATCAGGTTTCCATGGGCTCAGGATGCTCCAAGCAGAGAGGGAGAGACGGGACATCAAAGATGTaGGGACAGAAGGAACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: PVHQVSMGSGCSKQRGRDGTSKM*GQKEPD Trigger: ATCTGGTTCCTTCTGTCCCCACATCTTTGATGTCCC...GTCTCTCCCTCTCTGCTTGGAGCATCCTGAGCCCATGGAAACCTGATGCACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAGAGGGCAAAGCAGGGCTACCGCAGGGACAAGCCCTACTCCTTCCTGATGGAGATAGAAAAGCCTaGTCCTCTCCCATGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: CKEGKAGLPQGQALLLPDGDRKA*SSPMRL Trigger: AAGCCTCATGGGAGAGGACCAGGCTTTTCTATCTCC...ATCAGGAAGGAGTAGGGCTTGTCCCTGCGGTAGCCCTGCTTTGCCCTCTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CAA 90 bp | ACAACGGGGCTGGCCAGACTGCTAGGGAATGATGTATCTGTTGTTTaGAGTCATGTGTGTACCAGCCCCTGTCCAGGTCTCAGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: TTGLARLLGNDVSVV*SHVCTSPCPGLSKD Trigger: GTCTTTGCTGAGACCTGGACAGGGGCTGGTACACACATGACTCAAAACAACAGATACATCATTCCCTAGCAGTCTGGCCAGCCCCGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGGACATCAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTGGGGAAGTGAGCACATaGTCTGAGCAGGAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RGHQRCGDRRNQIFNRIAGEVST*SEQERG Trigger: CCCTCGCTCCTGCTCAGACCATGTGCTCACTTCCCC...AGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTGATGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR TCA 90 bp | CAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTCTGTGTACTAATGGCGTGGGGAAGTaGGCACATGGTCTGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: QRCGDRRNQIFNRIALCTNGVGK*AHGLSR Trigger: CCTGCTCAGACCATGTGCTCACTTCCCCACGCCATT...AGTACACAGAGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR TCA 90 bp | TGTAAAGAGGGCAAAGCAGGGCTACCGCAGGGACAAGCCCTACTCCTTCCTGATTTTGCATTACATCTTTaGGATTTCCACAGACTCGGG | + |
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Preference number: 2 (lower is better) Translates to: CKEGKAGLPQGQALLLPDFALHL*DFHRLG Trigger: CCCGAGTCTGTGGAAATCTCAAAGATGTAATGCAAA...ATCAGGAAGGAGTAGGGCTTGTCCCTGCGGTAGCCCTGCTTTGCCCTCTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAGACAAGCAGCAAAGAGAAACCCTGAAACAGGTCCCACCAAGGCAGATCGAGAGTTATCCTCATTaGAGAGTCCTCAAAGCTATC | + |
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Preference number: 2 (lower is better) Translates to: SKDKQQRETLKQVPPRQIESYPH*RVLKAI Trigger: GATAGCTTTGAGGACTCTGCAATGAGGATAACTCTC...GATCTGCCTTGGTGGGACCTGTTTCAGGGTTTCTCTTTGCTGCTTGTCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 72 bp | CGCAGTGGGTGTCTGAGTCTTCATTCCCAGATGTGCTaGCTGGCTTTGTGGGTCAACTTGCCCCAAGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSGCLSLHSQMC*LALWVNLPQAG Trigger: TCCAGCTTGGGGCAAGTTGACCCACAAAGCCAGCCAGCACATCTGGGAATGAAGACTCAGACACCCACTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR TCA 72 bp | TTGTCCATCTTGGGGACACTTAATGGCGTGGGGAAGTaGGCACATGGTCTGAGCAGGAGCGAGGGAGGGATA | + |
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Preference number: 3 (lower is better) Translates to: LSILGTLNGVGK*AHGLSRSEGGI Trigger: TATCCCTCCCTCGCTCCTGCTCAGACCATGTGCTCACTTCCCCACGCCATTAAGTGTCCCCAAGATGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 72 bp | CAGGTCCCACCAAGGCAGATCAGACTCAGGCTCATTTaGATGCCTGCTTCTGATTGGGCAGACCCCATCCTA | + |
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Preference number: 3 (lower is better) Translates to: QVPPRQIRLRLI*MPASDWADPIL Trigger: TAGGATGGGGTCTGCCCAATCAGAAGCAGGCATGCAAATGAGCCTGAGTCTGATCTGCCTTGGTGGGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 72 bp | GGGAGAGGTATCTGGCTTCTCTTGTATGCCCCGCAGTaGGTGTCTGAGTCTTCATTCCCAGATGTGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GRGIWLLLYAPQ*VSESSFPDVLA Trigger: AGCCAGCACATCTGGGAATGAAGACTCAGACACCCACTGCGGGGCATACAAGAGAAGCCAGATACCTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGTATCTGGCTTCTCTTGTATGCCCCGCAGTGGGTGTCTGAGTCTTCATTCCATGTGCTGGCTGGCTTaGTGGGTCAACTTGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: EVSGFSCMPRSGCLSLHSMCWLA*WVNLPQ Trigger: TTGGGGCAAGTTGACCCACAAAGCCAGCCAGCACAT...GGAATGAAGACTCAGACACCCACTGCGGGGCATACAAGAGAAGCCAGATACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR TCA 72 bp | GCAGATCAGACTCAGGCTCATTTGCATGCCTGCTTCTaGTTGGGCAGACCCCATCCTATCTCACTGTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: ADQTQAHLHACF*LGRPHPISLSR Trigger: TCGGGACAGTGAGATAGGATGGGGTCTGCCCAATCAGAAGCAGGCATGCAAATGAGCCTGAGTCTGATCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 72 bp | TCCCACCAAGGCAGATCAGACTCAGGCTCATTTGCATaGCTGCTTCTGATTGGGCAGACCCCATCCTATCTC | + |
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Preference number: 3 (lower is better) Translates to: SHQGRSDSGSFA*LLLIGQTPSYL Trigger: GAGATAGGATGGGGTCTGCCCAATCAGAAGCAGGCATGCAAATGAGCCTGAGTCTGATCTGCCTTGGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR TCA 72 bp | TATCTGGCTTCTCTTGTATGCCCCGCAGTGGGTGTCTaGGTCTTCATTCCCAGATGTGCTGGCTGGCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: YLASLVCPAVGV*VFIPRCAGWLC Trigger: ACAAAGCCAGCCAGCACATCTGGGAATGAAGACTCAGACACCCACTGCGGGGCATACAAGAGAAGCCAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR GCA 72 bp | ATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTaGTCTGTGTACTGCCCGGCTGTTGCGCTACTTCCC | + |
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Preference number: 3 (lower is better) Translates to: MWGQKEPDLQSN*SVYCPAVALLP Trigger: GGGAAGTAGCGCAACAGCCGGGCAGTACACAGAGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 72 bp | GGAGATAGAAAAGCCTGGTCCTCTCCCATGAGGCTTTaGATTACATCTTTGAGATTTCCACAGACTCGGGTC | + |
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Preference number: 3 (lower is better) Translates to: GDRKAWSSPMRL*ITSLRFPQTRV Trigger: GACCCGAGTCTGTGGAAATCTCAAAGATGTAATGCAAAGCCTCATGGGAGAGGACCAGGCTTTTCTATCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR GCA 72 bp | TGCTGGGAACGGAATTTGGGCCCCTTGCAAGAACAGTaGACACACATCTTTCCAGCCTTTCTTCCATTAACT | + |
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Preference number: 3 (lower is better) Translates to: CWERNLGPLQEQ*THIFPAFLPLT Trigger: AGTTAATGGAAGAAAGGCTGGAAAGATGTGTGTGCACTGTTCTTGCAAGGGGCCCAAATTCCGTTCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 72 bp | ATCTGTGGATGTGAGAGACTCAGAGAGACCCTACTTTaGGGGTCTCTAGAGAGTTATCCTCATTGCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: ICGCERLRETLL*GSLESYPHCRV Trigger: GACTCTGCAATGAGGATAACTCTCTAGAGACCCCCAAAGTAGGGTCTCTCTGAGTCTCTCACATCCACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 72 bp | TGTGAGCACCTTAATAAGGATGCTGGGAACGGAATTTaGGCCCCTTGCAAGAACAGTGCACACACATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CEHLNKDAGNGI*APCKNSAHTSF Trigger: GAAAGATGTGTGTGCACTGTTCTTGCAAGGGGCCCAAATTCCGTTCCCAGCATCCTTATTAAGGTGCTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR-3UTR CAA 90 bp | AGCAAAGACAAGCAGCAAAGAGAAACCCTGAAACAGGTCCCACCAAGGCAGATCCTCTCCCATGAGGCTTaGCATTACATCTTTGAGATT | + |
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Preference number: 3 (lower is better) Translates to: SKDKQQRETLKQVPPRQILSHEA*HYIFEI Trigger: AATCTCAAAGATGTAATGCAAAGCCTCATGGGAGAG...GATCTGCCTTGGTGGGACCTGTTTCAGGGTTTCTCTTTGCTGCTTGTCTTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CCA 72 bp | GATTCCCTCTCAGCTGTCTTCCTCCTCAGAGGTAACTaGTCTTACTCAGTTCTCAAGGAATGCAGCAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: DSLSAVFLLRGN*SYSVLKECSRN Trigger: ATTTCTGCTGCATTCCTTGAGAACTGAGTAAGACCAGTTACCTCTGAGGAGGAAGACAGCTGAGAGGGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | TTTAGGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTGGCCCAGCTCACAGGCCGTaGCATCCTGGCCCTCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: FRCVELESGTELGGEVSGPAHRP*HPGPPG Trigger: TCCGGGAGGGCCAGGATGCCACGGCCTGTGAGCTGG...GCCAGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACCTAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR GCA 90 bp | AACTCAGTACAGGCACAACCAACAAAGTTCAGTGTCCCTGTGCATCAGGTTTCCACCGTGCCCAGCGTGTaGGCCCCAACTCGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: NSVQAQPTKFSVPVHQVSTVPSV*APTRFP Trigger: TGGGAACCGAGTTGGGGCGCACACGCTGGGCACGGT...GGAAACCTGATGCACAGGGACACTGAACTTTGTTGGTTGTGCCTGTACTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR GCA 90 bp | TGTCTGAGTCTTCATTCCCAGATGTGCTGGCTGGCTTTGTGGGTCAACTTGCCCAGCTTCCGAGTCACCTaGAGCCTCTGCATCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: CLSLHSQMCWLALWVNLPSFRVT*SLCIWY Trigger: GTACCAGATGCAGAGGCTGCAGGTGACTCGGAAGCT...GGGCAAGTTGACCCACAAAGCCAGCCAGCACATCTGGGAATGAAGACTCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CCA 90 bp | TGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTGGCTTCTCTTGTACTGGCCCCAGGTGCTTaGTCAGGAAGCTCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: WSWSLELNLGERYLASLVLAPGA*SGSSSQ Trigger: CTGTGATGAGCTTCCTGACCAAGCACCTGGGGCCAG...TACAAGAGAAGCCAGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CCA 90 bp | AAACAGGTCCCACCAAGGCAGATCAGACTCAGGCTCATTTGCATGCCTGCTTCTCTGGCCCCAGGTGCTTaGTCAGGAAGCTCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: KQVPPRQIRLRLICMPASLAPGA*SGSSSQ Trigger: CTGTGATGAGCTTCCTGACCAAGCACCTGGGGCCAG...AGAAGCAGGCATGCAAATGAGCCTGAGTCTGATCTGCCTTGGTGGGACCTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | TTCATTCCCAGATGTGCTGGCTGGCTTTGTGGGTCAACTTGCCCCAAGCTGGAGGTCCACGGGTCGTTCTaGTTGAAGATGCTAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: FIPRCAGWLCGSTCPKLEVHGSF*LKMLEL Trigger: CAGCTCTAGCATCTTCAACCAGAACGACCCGTGGAC...CTCCAGCTTGGGGCAAGTTGACCCACAAAGCCAGCCAGCACATCTGGGAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR TCA 90 bp | AGTCTGGAACTGAACTTGGGGGAGAGGTATCTGGCTTCTCTTGTATGCCCCGCAGCTTTCCAGCAAAGCTaGGTATCTGGATGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SLELNLGERYLASLVCPAAFQQS*VSGCGS Trigger: GCTACCGCATCCAGATACTCAGCTTTGCTGGAAAGC...TGCGGGGCATACAAGAGAAGCCAGATACCTCTCCCCCAAGTTCAGTTCCAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CCA 90 bp | GAGGTATCTGGCTTCTCTTGTATGCCCCGCAGTGGGTGTCTGAGTCTTCATTCCCCGCAGTCACCGTGTTaGGGATATCTTCTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: EVSGFSCMPRSGCLSLHSPQSPC*GYLLHE Trigger: CTCATGCAGAAGATATCCCCAACACGGTGACTGCGG...GGAATGAAGACTCAGACACCCACTGCGGGGCATACAAGAGAAGCCAGATACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR CAA 72 bp | GATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATaGCTCTGTGTACTGCCCGGCTGTTGCGCTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: DVGTEGTRSSIE*LCVLPGCCATS Trigger: GGAAGTAGCGCAACAGCCGGGCAGTACACAGAGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | AAAATCCCTTTAGGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGGAGAAAATTCCTCCATaGGATCCAGCTCACAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KIPLGVWSWSLELNLGEREKIPP*DPAHRP Trigger: CGGCCTGTGAGCTGGATCTCATGGAGGAATTTTCTC...CCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACCTAAAGGGATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR TCA 90 bp | TCCAACAAGGCTATTCTCCCAAGGCAGGAACTCAGTACAGGCACAACCAACAAAAGTGTCTTGGGGGCCTaGGATTCCAGAAGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: SNKAILPRQELSTGTTNKSVLGA*DSRRKC Trigger: GCACTTCCTTCTGGAATCTCAGGCCCCCAAGACACT...TTTGTTGGTTGTGCCTGTACTGAGTTCCTGCCTTGGGAGAATAGCCTTGTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | AAACAGGTCCCACCAAGGCAGATCAGACTCAGGCTCATTTGCATGCCTGCTTCTACCGAAGAAGAAAGCTaGGCTGATATAGCCTGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KQVPPRQIRLRLICMPASTEEES*ADIACG Trigger: GCCACAGGCTATATCAGCTCAGCTTTCTTCTTCGGT...AGAAGCAGGCATGCAAATGAGCCTGAGTCTGATCTGCCTTGGTGGGACCTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | CCCTTTAGGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTGCCAAGGTACAATCGTaGGGACAAAAGCCATATCCT | + |
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Preference number: 4 (lower is better) Translates to: PFRCVELESGTELGGEVSAKVQS*GQKPYP Trigger: AGGATATGGCTTTTGTCCCCACGATTGTACCTTGGC...AGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACCTAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CCA 90 bp | CAGTGGGTGTCTGAGTCTTCATTCCCAGATGTGCTGGCTGGCTTTGTGGGTCAACCTCCCGGAAATAGATaGAGTCAGCAGAATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: QWVSESSFPDVLAGFVGQPPGNR*SQQNER Trigger: CCTTTCATTCTGCTGACTCCATCTATTTCCGGGAGG...TTGACCCACAAAGCCAGCCAGCACATCTGGGAATGAAGACTCAGACACCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| 3UTR CAA 72 bp | GCCTGGTCCTCTCCCATGAGGCTTTGCATTACATCTTaGAGATTTCCACAGACTCGGGTCCAGGAGAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AWSSPMRLCITS*RFPQTRVQEKR Trigger: TCTCTTCTCCTGGACCCGAGTCTGTGGAAATCTCAAAGATGTAATGCAAAGCCTCATGGGAGAGGACCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | ATTTGGGCCCCTTGCAAGAACAGTGCACACACATCTTTCCAGCCTTTCTTCCATGCTTTCCAGCAAAGCTaGGTATCTGGATGCGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IWAPCKNSAHTSFQPFFHAFQQS*VSGCGS Trigger: GCTACCGCATCCAGATACTCAGCTTTGCTGGAAAGC...ATGGAAGAAAGGCTGGAAAGATGTGTGTGCACTGTTCTTGCAAGGGGCCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | TGGGTGTCTGAGTCTTCATTCCCAGATGTGCTGGCTGGCTTTGTGGGTCAACTTGGGATATCTTCTGCATaGGGGATGTGCAAAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WVSESSFPDVLAGFVGQLGISSA*GMCKKP Trigger: TGGCTTTTTGCACATCCCTCATGCAGAAGATATCCC...AAGTTGACCCACAAAGCCAGCCAGCACATCTGGGAATGAAGACTCAGACACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR TCA 90 bp | TGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTGGCTTCTCTTGTAGAAAGGAGCCTCCCTTaGGAAAATTCCTCCATGAGA | + |
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Preference number: 4 (lower is better) Translates to: WSWSLELNLGERYLASLVERSLP*ENSSMR Trigger: TCTCATGGAGGAATTTTCTCAAGGGAGGCTCCTTTC...TACAAGAGAAGCCAGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR TCA 90 bp | TCCAACAAGGCTATTCTCCCAAGGCAGGAACTCAGTACAGGCACAACCAACAAAGCCACCCTCTCCCCTTaGAAGCGGATATCAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: SNKAILPRQELSTGTTNKATLSP*KRISKI Trigger: GATCTTTGATATCCGCTTTCAAGGGGAGAGGGTGGC...TTTGTTGGTTGTGCCTGTACTGAGTTCCTGCCTTGGGAGAATAGCCTTGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | CAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTCTGTGTACTTGGCCTCCTGGACACTaGTTTCATAGGCCACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QRCGDRRNQIFNRIALCTWPPGH*FHRPPS Trigger: AGAGGGTGGCCTATGAAATCAGTGTCCAGGAGGCCA...AGTACACAGAGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | AGGGGACATCAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTGTAGCAGGTCGACATTaGTGCTGGGGAATTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: RGHQRCGDRRNQIFNRIAVAGRH*CWGIST Trigger: GGTGGAAATTCCCCAGCATCAATGTCGACCTGCTAC...AGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTGATGTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR GCA 90 bp | CAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTCTGTGTACTAGCTTCCGAGTCACCTaGAGCCTCTGCATCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QRCGDRRNQIFNRIALCTSFRVT*SLCIWY Trigger: GTACCAGATGCAGAGGCTGCAGGTGACTCGGAAGCT...AGTACACAGAGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR GCA 90 bp | TCCAACAAGGCTATTCTCCCAAGGCAGGAACTCAGTACAGGCACAACCAACAAACCAGTTCTTCAGCCCTaGCACATCCAGATCCACTTT | + |
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Preference number: 4 (lower is better) Translates to: SNKAILPRQELSTGTTNKPVLQP*HIQIHF Trigger: AAAGTGGATCTGGATGTGGCAGGGCTGAAGAACTGG...TTTGTTGGTTGTGCCTGTACTGAGTTCCTGCCTTGGGAGAATAGCCTTGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | AGGGATGTAGATGAAGAATCTGTGGATGTGAGAGACTCAGAGAGACCCTACTTTCCGCAGTCACCGTGTTaGGGATATCTTCTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: RDVDEESVDVRDSERPYFPQSPC*GYLLHE Trigger: CTCATGCAGAAGATATCCCCAACACGGTGACTGCGG...AAAGTAGGGTCTCTCTGAGTCTCTCACATCCACAGATTCTTCATCTACATCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | AACTCAGTACAGGCACAACCAACAAAGTTCAGTGTCCCTGTGCATCAGGTTTCCCCTCCCGGAAATAGATaGAGTCAGCAGAATGAAAGG | + |
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Preference number: 4 (lower is better) Translates to: NSVQAQPTKFSVPVHQVSPPGNR*SQQNER Trigger: CCTTTCATTCTGCTGACTCCATCTATTTCCGGGAGG...GGAAACCTGATGCACAGGGACACTGAACTTTGTTGGTTGTGCCTGTACTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CCA 90 bp | AGGGGACATCAAAGATGTGGGGACAGAAGGAACCAGATCTTCAATCGAATTGCTGCCAAGGTACAATCGTaGGGACAAAAGCCATATCCT | + |
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Preference number: 4 (lower is better) Translates to: RGHQRCGDRRNQIFNRIAAKVQS*GQKPYP Trigger: AGGATATGGCTTTTGTCCCCACGATTGTACCTTGGC...AGCAATTCGATTGAAGATCTGGTTCCTTCTGTCCCCACATCTTTGATGTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR TCA 90 bp | GGAGATAGAGTTATAGATTGTTGTGAGCACCTTAATAAGGATGCTGGGAACGGAGGGATATCTTCTGCATaGGGGATGTGCAAAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: GDRVIDCCEHLNKDAGNGGISSA*GMCKKP Trigger: TGGCTTTTTGCACATCCCTCATGCAGAAGATATCCC...TCCGTTCCCAGCATCCTTATTAAGGTGCTCACAACAATCTATAACTCTATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| 3UTR CAA 72 bp | GACCCTACTTTGGGGGTCTCTAGAGAGTTATCCTCATaGCAGAGTCCTCAAAGCTATCATAAGCTTTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: DPTLGVSRELSS*QSPQSYHKLLN Trigger: ATTTAAAAGCTTATGATAGCTTTGAGGACTCTGCAATGAGGATAACTCTCTAGAGACCCCCAAAGTAGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS TCA 90 bp | CCTCCTCCTTCCTCTGGGTCACAGCCAAGTGATACCTCCCCCAGGTaGAGGCTTTCTCTATGGGACTTTCCTGGGGCAAGGGCTTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PPPSSGSQPSDTSPR*RLSLWDFPGARAFQ Trigger: CTGGAAAGCCCTTGCCCCAGGAAAGTCCCATAGAGAAAGCCTTCACCTGGGGGAGGTATCACTTGGCTGTGACCCAGAGGAAGGAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017316.7 ENSMUST00000103105.10 |
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| CDS GCA 90 bp | CTCCGGTTGCCAAGGTACAATCGTGGGGACAAAAGCCATATCCTCTaGCCAGGCCCAGTTCTTCAGCCCTGCCACATCCAGATCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: LRLPRYNRGDKSHIL*PGPVLQPCHIQIHF Trigger: AAAGTGGATCTGGATGTGGCAGGGCTGAAGAACTGGGCCTGGGCAGAGGATATGGCTTTTGTCCCCACGATTGTACCTTGGCAACCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS TCA 90 bp | GTATTTGCCAATGCCAAAGCTACCGTCCACGTAGCAGGTCGACATTaGTGCTGGGGAATTTCCACCGTAGAGGGCTATGGCCTCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: VFANAKATVHVAGRH*CWGISTVEGYGLLD Trigger: GTCCAGGAGGCCATAGCCCTCTACGGTGGAAATTCCCCAGCATCAATGTCGACCTGCTACGTGGACGGTAGCTTTGGCATTGGCAAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS GCA 90 bp | CTCCGGTTGCCAAGGTACAATCGTGGGGACAAAAGCCATATCCTCTaGCCAGGCCCAGTTCTTCAGCCCTGTACCATTGTTTGGGACCAA | + |
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Preference number: 5 (lower is better) Translates to: LRLPRYNRGDKSHIL*PGPVLQPCTIVWDQ Trigger: TTGGTCCCAAACAATGGTACAGGGCTGAAGAACTGGGCCTGGGCAGAGGATATGGCTTTTGTCCCCACGATTGTACCTTGGCAACCGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CAA 90 bp | CATTCCCAGATGTGCTGGCTGGCTTTGTGGGTCAACTTGCCCCAAGCTGGAGTTCACGGGTCGTTCTGGTaGAAGATGCTAGAGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: HSQMCWLALWVNLPQAGVHGSFW*KMLELL Trigger: TAGCAGCTCTAGCATCTTCAACCAGAACGACCCGTG...AACTCCAGCTTGGGGCAAGTTGACCCACAAAGCCAGCCAGCACATCTGGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CAA 90 bp | TGCATCAGGTTTCCATGGGCTCAGGATGCTCCAAGCAGAGAGGGAGAGACAAGGCACGGGTCGTTCTGGTaGAAGATGCTAGAGCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: CIRFPWAQDAPSREGETRHGSFW*KMLELL Trigger: TAGCAGCTCTAGCATCTTCAACCAGAACGACCCGTG...CCTTGTCTCTCCCTCTCTGCTTGGAGCATCCTGAGCCCATGGAAACCTGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CAA 90 bp | TGCATCAGGTTTCCATGGGCTCAGGATGCTCCAAGCAGAGAGGGAGAGACAAGGCGTAGCAGGTCGACATaGATGCTGGGGAATTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CIRFPWAQDAPSREGETRRSRST*MLGNFH Trigger: GTGGAAATTCCCCAGCATCAATGTCGACCTGCTACG...CCTTGTCTCTCCCTCTCTGCTTGGAGCATCCTGAGCCCATGGAAACCTGATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CAA 90 bp | CCCAAGGCAGGAACTCAGTACAGGCACAACCAACAAAGTTCAGTGTCCCTGTGCCAAGGAAGAAGACACTaGGCTCCCCTGGACACTGAA | + |
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Preference number: 5 (lower is better) Translates to: PKAGTQYRHNQQSSVSLCQGRRH*APLDTE Trigger: TTCAGTGTCCAGGGGAGCCAAGTGTCTTCTTCCTTG...GCACAGGGACACTGAACTTTGTTGGTTGTGCCTGTACTGAGTTCCTGCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CAA 90 bp | CCCAAGGCAGGAACTCAGTACAGGCACAACCAACAAAGTTCAGTGTCCCTGTGCGGCCACCCTCTCCCCTaGAAAGCGGATATCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PKAGTQYRHNQQSSVSLCGHPLP*KADIKD Trigger: ATCTTTGATATCCGCTTTCAAGGGGAGAGGGTGGCC...GCACAGGGACACTGAACTTTGTTGGTTGTGCCTGTACTGAGTTCCTGCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS-3UTR CAA 90 bp | GGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTGGCTTCTTTCAGCCCTGTACCATaGTTTGGGACCAATACCACA | + |
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Preference number: 5 (lower is better) Translates to: GVWSWSLELNLGERYLASFSPVP*FGTNTT Trigger: TGTGGTATTGGTCCCAAACAATGGTACAGGGCTGAA...AGAAGCCAGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CAA 90 bp | CCCTTTAGGTGTGTGGAGCTGGAGTCTGGAACTGAACTTGGGGGAGAGGTATCTAGAAAGGAGCCTCCCTaGAGAAAATTCCTCCATGAG | + |
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Preference number: 5 (lower is better) Translates to: PFRCVELESGTELGGEVSRKEPP*RKFLHE Trigger: CTCATGGAGGAATTTTCTCAAGGGAGGCTCCTTTCT...AGATACCTCTCCCCCAAGTTCAGTTCCAGACTCCAGCTCCACACACCTAAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS-3UTR CAA 90 bp | AACTCAGTACAGGCACAACCAACAAAGTTCAGTGTCCCTGTGCATCAGGTTTCCCCTGTGGCGTGGAATTaGACTTCTATGGCCCCATTG | + |
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Preference number: 5 (lower is better) Translates to: NSVQAQPTKFSVPVHQVSPVAWN*TSMAPL Trigger: CAATGGGGCCATAGAAGTCAAATTCCACGCCACAGG...GGAAACCTGATGCACAGGGACACTGAACTTTGTTGGTTGTGCCTGTACTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS TCA 72 bp | ACAGAGAAAGGAGCCTCCCTTGAGAAAATTCCTCCATaGGATCCAGCTCACAGGCCGTGGCATCCTGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: TEKGASLEKIPP*DPAHRPWHPGP Trigger: AGGGCCAGGATGCCACGGCCTGTGAGCTGGATCTCATGGAGGAATTTTCTCAAGGGAGGCTCCTTTCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017316.7 |
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| CDS GCA 72 bp | GAAGAGGTTGGCTCAGTCCACCCCCATCTCCGCTCCTaGCAGCTAGCAAGACACAAACCAAAGCAAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: EEVGSVHPHLRS*QLARHKPKQRW Trigger: CCATCTTTGCTTTGGTTTGTGTCTTGCTAGCTGGCAGGAGCGGAGATGGGGGTGGACTGAGCCAACCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS CCA 72 bp | CTCCCCCAGGTGAAGGCTTTCTCTATGGGACTTTCCTaGGGCAAGGGCTTTCCAGCAAAGCTGAGTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPQVKAFSMGLS*GKGFPAKLSIW Trigger: CCAGATACTCAGCTTTGCTGGAAAGCCCTTGCCCCAGGAAAGTCCCATAGAGAAAGCCTTCACCTGGGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017316.7 ENSMUST00000103105.10 |
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| CDS TCA 72 bp | AATGCCAAAGCTACCGTCCACGTAGCAGGTCGACATTaGTGCTGGGGAATTTCCACCGTAGAGGGCTATGGC | + |
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Preference number: 6 (lower is better) Translates to: NAKATVHVAGRH*CWGISTVEGYG Trigger: GCCATAGCCCTCTACGGTGGAAATTCCCCAGCATCAATGTCGACCTGCTACGTGGACGGTAGCTTTGGCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS CAA 72 bp | CAATGCCAAAGCTACCGTCCACGTAGCAGGTCGACATaGATGCTGGGGAATTTCCACCGTAGAGGGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: QCQSYRPRSRST*MLGNFHRRGLW Trigger: CCATAGCCCTCTACGGTGGAAATTCCCCAGCATCAATGTCGACCTGCTACGTGGACGGTAGCTTTGGCATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS CAA 90 bp | AGTATTTGCCAATGCCAAAGCTACCGTCCACGTAGCAGGTCGACATaGATGCTGGGGAATTTCCACCGTAGAGGGCTATGGCCTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SICQCQSYRPRSRST*MLGNFHRRGLWPPG Trigger: TCCAGGAGGCCATAGCCCTCTACGGTGGAAATTCCCCAGCATCAATGTCGACCTGCTACGTGGACGGTAGCTTTGGCATTGGCAAATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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| CDS TCA 72 bp | GTTCCCAAACTTCTCACCAGCACCGAAGAAGAAAGCTaGGCTGATATAGCCTGTGGCGTGGAATTTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: VPKLLTSTEEES*ADIACGVEFDF Trigger: GAAGTCAAATTCCACGCCACAGGCTATATCAGCTCAGCTTTCTTCTTCGGTGCTGGTGAGAAGTTTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103105.10 |
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