Pregenerated sensors for AOC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078651Ensembl transcript IDs: ENSMUST00000041095.14, ENSMUST00000107264.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGAACTCAGGACCTCTGGAAGAACAGTCAAGTGCTCTTAATCGCTaGGCCATTTCTCCACTCCACATTCCATCCCTCCTACCCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: LNSGPLEEQSSALNR*AISPLHIPSLLPWG Trigger: GCCCCAGGGTAGGAGGGATGGAATGTGGAGTGGAGAAATGGCTCAGCGATTAAGAGCACTTGACTGTTCTTCCAGAGGTCCTGAGTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR-3UTR CCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCACCATCCCTCCTACCCTaGGGCCTCACCATAGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCRELNSPSLLP*GLTIAS Trigger: TGAGGCTATGGTGAGGCCCCAGGGTAGGAGGGATGG...TGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR CAA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAAGTGCTCTTAATCGC | + |
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Preference number: 2 (lower is better) Translates to: DPITDGCEPPCGCRE*NSGPLEEQSSALNR Trigger: GCGATTAAGAGCACTTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR TCA 72 bp | GGACCTCTGGAAGAACAGTCAAGTGCTCTTAATCGCTaGGCCATTTCTCCACTCCACATTCCATCCCTCCTA | + |
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Preference number: 3 (lower is better) Translates to: GPLEEQSSALNR*AISPLHIPSLL Trigger: TAGGAGGGATGGAATGTGGAGTGGAGAAATGGCTCAGCGATTAAGAGCACTTGACTGTTCTTCCAGAGGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR TCA 72 bp | CCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTaGGCCACCATGTGGTTGCAGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PEESIRSHYRWL*ATMWLQGIELR Trigger: CCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTaGAGGGAATTGAACTCAGGACCTCTGGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DPITDGCEPPCG*RELNSGPLEEQ Trigger: CTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAGCCCCTGGAAGCAGCTaGACTGACCCCGTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLEAPGSS*TDPVPT Trigger: GGTGGGCACGGGGTCAGTCCAGCTGCTTCCAGGGGC...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGGTACCTCCCCCAGCTaGGAGCCCTCTCCTCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TRREHQIPLQMVVSHHVVGTSPS*EPSPRC Trigger: GCAGCGAGGAGAGGGCTCTCAGCTGGGGGAGGTACC...AACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTCGGTACCCTCGCTGGTaGCCCCAGGCATTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TRREHQIPLQMVVSHHVVRYPRW*PQALVW Trigger: CCAGACCAATGCCTGGGGTCACCAGCGAGGGTACCG...AACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACGGGTCCAGGGCCCCGTaGTCCAACAGTAGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNGSRAP*SNSSSS Trigger: GCTGGAGCTACTGTTGGACCACGGGGCCCTGGACCC...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAATGCTCAGGACCTGCCTaGTCAGCTGTGGGCGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLECSGPA*SAVGAV Trigger: TACAGCGCCCACAGCTGACCAGGCAGGTCCTGAGCA...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | ACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTAGCCCCGGCCCCAGGTaGTTGGTCAGGAAGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: TRREHQIPLQMVVSHHVVSPGPR*LVRKLI Trigger: GATGAGCTTCCTGACCAAGCACCTGGGGCCGGGGCT...AACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGCAGCCAGGTCCTCTCTaGTCAGGACCTGCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ASDPITDGCEPPCGCRELQPGPL*SGPAWS Trigger: TGACCAGGCAGGTCCTGAGCAGAGAGGACCTGGCTG...CAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | AGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGCGAAGGGGCAGTCCCTaGGCCTCCTCAAATACACAC | + |
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Preference number: 4 (lower is better) Translates to: REHQIPLQMVVSHHVVAGRRGSP*ASSNTH Trigger: GTGTGTATTTGAGGAGGCCCAGGGACTGCCCCTTCG...CCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAATCGAGGAGACTGGCTaGAACTGCCTTGCCTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLEIEETG*NCLAWS Trigger: TGACCAGGCAAGGCAGTTTCAGCCAGTCTCCTCGAT...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCTGGAAGCAGCTGGACTaGCCCCGTGCCCACCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: VYGYTVSVFRHTRREHQIWKQLD*PRAHQY Trigger: GTACTGGTGGGCACGGGGTCAGTCCAGCTGCTTCCA...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATCTGATGACACCGACCTaGCCACAAGGCTTGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: EHQIPLQMVVSHHVVAGNLMTPT*PQGLSW Trigger: CCAGCTCAAGCCTTGTGGTCAGGTCGGTGTCATCAG...ATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACCTCTCCAGAGGCACATaGACACCAGGAGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNLSRGT*TPGGLW Trigger: CCACAGCCCTCCTGGTGTGCATGTGCCTCTGGAGAG...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAGGGTGTGTCCAGGGATaGATTCTGGGAGGTATGGAA | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLEGCVQG*ILGGME Trigger: TTCCATACCTCCCAGAATTCATCCCTGGACACACCC...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCACTGGGGACCCTGAAGTaGGAACTGAAGAGGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DPITDGCEPPCGCRELNSLGTLK*ELKRGK Trigger: CTTCCCCCTCTTCAGTTCTCACTTCAGGGTCCCCAG...TGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTCCAAAGCTCGGCTGTTaGGACCAAGCCCATAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TRREHQIPLQMVVSHHVVPKLGC*DQAHSC Trigger: GCAGCTATGGGCTTGGTCTCAACAGCCGAGCTTTGG...AACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACCCCCCGATGCCATTATaGTGCCTTCGAAGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNPPMPL*CLRRGS Trigger: ACTGCCCCTTCGAAGGCATCATAATGGCATCGGGGG...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATGTGGGCGCTGTAGCTaGAGCTCTGGGTTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: MYMGTLSLSSDTPEESIRCGRCS*SSGFQG Trigger: CCCCTGGAACCCAGAGCTTCAGCTACAGCGCCCACA...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCTCTGCTCAGGACCTaGCTGGTCAGCTGTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: MYMGTLSLSSDTPEESIRSLLRT*LVSCGR Trigger: GCGCCCACAGCTGACCAGGCAGGTCCTGAGCAGAGA...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | TCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGGAGCCCTCTCCTCGCTaGTCTCCAGAGGCACATGCA | + |
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Preference number: 4 (lower is better) Translates to: SVFRHTRREHQIPLQMVVEPSPR*SPEAHA Trigger: TGCATGTGCCTCTGGAGAGCAGCGAGGAGAGGGCTC...CACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTTGGGGACACAGTCTaGCAGCTGTTGGGTGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VSVFRHTRREHQIPLQMVVGDTV*QLLGAG Trigger: GCCTGCACCCAACAGCTGGCAGACTGTGTCCCCAAC...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCGGCCCCAGGTGCTTaGTCAGGAAGCTCATCACAG | + |
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Preference number: 4 (lower is better) Translates to: VYGYTVSVFRHTRREHQIPAPGA*SGSSSQ Trigger: CTGTGATGAGCTTCCTGACCAAGCACCTGGGGCCGG...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATGGGAAGAGGAGGGTCTaGAGTGACTCTAGGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: EHQIPLQMVVSHHVVAGNGKRRV*SDSRPQ Trigger: TTGAGGCCTAGAGTCACTCCAGACCCTCCTCTTCCC...ATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCGGAGGGCTGTGGATCTaGATTCGGTACCCTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VYGYTVSVFRHTRREHQIGGLWI*IRYPRW Trigger: CCAGCGAGGGTACCGAATCCAGATCCACAGCCCTCC...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAGAACACTCCAAGACCTaGGATGTTATGGTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLEEHSKT*DVMVEG Trigger: GCCCTCTACCATAACATCTCAGGTCTTGGAGTGTTC...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACCCTGACCACAAGGCTTaGGCTGGCCAAACCACCATA | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNPDHKA*AGQTTI Trigger: TATGGTGGTTTGGCCAGCTCAAGCCTTGTGGTCAGG...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCGCTGGACTGACCCCGTaGCCACCAGTACATGGATGT | + |
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Preference number: 4 (lower is better) Translates to: VYGYTVSVFRHTRREHQIAGLTP*PPVHGC Trigger: ACATCCATGTACTGGTGGGCACGGGGTCAGTCCAGC...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGAGCTCCCCCAGGGAAATaGAGCCAGGTCCTCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MYMGTLSLSSDTPEESIRAPPGK*SQVLSA Trigger: AGCAGAGAGGACCTGGCTGCATTTCCCTGGGGGAGC...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGCATGGGGGATGTaGAGGAAACTGGCTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNSAWGM*RKLAVT Trigger: GGTGACAGCCAGTTTCCTGCACATCCCCCATGCTGA...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGCAGAAGCCAGAAAGGTaGGTGCCTTTGGTAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: ASDPITDGCEPPCGCRELQKPER*VPLVAP Trigger: TGGAGCTACCAAAGGCACCCACCTTTCTGGCTTCTG...CAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | AGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGGGATGTCCACCATTGTaGCTTGATAGGGGCAATCCA | + |
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Preference number: 4 (lower is better) Translates to: REHQIPLQMVVSHHVVAGGCPPL*LDRGNP Trigger: TGGATTGCCCCTATCAAGCCACAATGGTGGACATCC...CCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATCCAGAGCAAAGACAGTaGGGAAAGACAGCCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: MGTLSLSSDTPEESIRSHPEQRQ*GKTAPE Trigger: TTCTGGGGCTGTCTTTCCTCACTGTCTTTGCTCTGG...ATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATCCACTAGCAGTAGAATaGAAAGGTGCCAAGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EHQIPLQMVVSHHVVAGNPLAVE*KGAKVE Trigger: CTCCACCTTGGCACCTTTGCATTCTACTGCTAGTGG...ATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACTCAGGACCTCTGGAAGCAAAGGTGCCAAGGTaGAGCCATTGTAGTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: DGCEPPCGCRELNSGPLEAKVPR*SHCSSR Trigger: TCTTGAACTACAATGGCTCCACCTTGGCACCTTTGC...TTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTAAGCTCCACCTGGTGTaGGTAGAGGGACCCGAATCA | + |
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Preference number: 4 (lower is better) Translates to: VSVFRHTRREHQIPLQMVKLHLV*VEGPES Trigger: TGATTCGGGTCCCTCTACCCACACCAGGTGGAGCTT...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTTCTGCCTCCTTCCTCTaGGTCACCACAAGCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VSVFRHTRREHQIPLQMVSASFL*VTTSWY Trigger: GTACCAGCTTGTGGTGACCCAGAGGAAGGAGGCAGA...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPCGCRE*NSGPLEEQSSA Trigger: AGCACTTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTCCACCAAAGAAGATaGTGGCTAGTGCCTCTCGCA | + |
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Preference number: 4 (lower is better) Translates to: VSVFRHTRREHQIPLQMVVHQRR*WLVPLA Trigger: TGCGAGAGGCACTAGCCATCATCTTCTTTGGTGGAC...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | TCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGGACACTCCTGGACACTaGCTTCATAAGCCACACGCT | + |
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Preference number: 4 (lower is better) Translates to: SLSSDTPEESIRSHYRWLDTPGH*LHKPHA Trigger: AGCGTGTGGCTTATGAAGTCAGTGTCCAGGAGTGTC...CAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATCAACTGGGCCAAGTCTaGATAGTAATGCCCAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: EHQIPLQMVVSHHVVAGNQLGQV*IVMPKV Trigger: TACCTTGGGCATTACTATGCAGACTTGGCCCAGTTG...ATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTTGGAAAGCGTGTGTATaGACCGCTCCCAGCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: VSVFRHTRREHQIPLQMVWKACV*TAPSTL Trigger: AAGAGTGCTGGGAGCGGTGCATACACACGCTTTCCA...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATAGATGTAATCATAGTTaGCCACTGATGACACCGACC | + |
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Preference number: 4 (lower is better) Translates to: EHQIPLQMVVSHHVVAGNRCNHS*PLMTPT Trigger: GGTCGGTGTCATCAGTGGGCAACTATGATTACATCT...ATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGACCACTGAACACCCCATaGCCAAAGGTAAATGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MYMGTLSLSSDTPEESIRPLNTP*PKVNVQ Trigger: CTGGACATTTACCTTTGGTCATGGGGTGTTCAGTGG...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | TCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGAACCCACACGCTCACCCTTaGACCGAATATCAAAAATTC | + |
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Preference number: 4 (lower is better) Translates to: SDPITDGCEPPCGCRELNPHAHP*TEYQKF Trigger: GAATTTTTGATATTCGGTTCAAGGGTGAGCGTGTGG...GTTCAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCAGGGATGAATTCTaGGAGGTATGGAAGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: MYMGTLSLSSDTPEESIRSRDEF*EVWKGI Trigger: GATGCCCTTCCATACCTCCCAGAATTCATCCCTGGA...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR TCA 90 bp | TCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGGAGGGGAGATGTCACTaGGTTTCCCTGTATGTTATA | + |
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Preference number: 4 (lower is better) Translates to: SLSSDTPEESIRSHYRWLEGRCH*VSLYVI Trigger: TATAACATACAGGGAAACTCAGTGACATCTCCCCTC...CAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | TCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGAGTAGAATGCAAAGGTaGCAAGGTGGAGCCATTGTA | + |
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Preference number: 4 (lower is better) Translates to: SLSSDTPEESIRSHYRWLSRMQR*QGGAIV Trigger: TACAATGGCTCCACCTTGGCACCTTTGCATTCTACT...CAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CCA 90 bp | ATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATGGATCGTCATTGTTTTaGGGGAATCAGCACCATAAA | + |
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Preference number: 4 (lower is better) Translates to: MGTLSLSSDTPEESIRSHGSSLF*GNQHHK Trigger: TTTATGGTGCTGATTCCCCCAAAACAATGACGATCC...ATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR GCA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCAGTTTTTCAAACCTaGTACATCAAGGTCCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: VYGYTVSVFRHTRREHQIPVFQT*YIKVQF Trigger: AAACTGGACCTTGATGTAGCAGGTTTGAAAAACTGG...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS TCA 90 bp | TCCTCTCTGCTCAGGACCTGCCTGGTCAGCTGTGGGCGCTGTAGCTaGAGCTCTGGGTTCCAGGGGGCTGCTACAGGCTTAAAGACCGCA | + |
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Preference number: 5 (lower is better) Translates to: SSLLRTCLVSCGRCS*SSGFQGAATGLKTA Trigger: TGCGGTCTTTAAGCCTGTAGCAGCCCCCTGGAACCCAGAGCTTCAGCTACAGCGCCCACAGCTGACCAGGCAGGTCCTGAGCAGAGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS GCA 90 bp | GGTAGCCAGGTAAAGGTATCGAGGAAGAGGGCTCCCCCAGGGAAATaGAGCCAGGTCCTCTCTGCTCAGGACCTGCCTGGTCAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GSQVKVSRKRAPPGK*SQVLSAQDLPGQLW Trigger: CCACAGCTGACCAGGCAGGTCCTGAGCAGAGAGGACCTGGCTGCATTTCCCTGGGGGAGCCCTCTTCCTCGATACCTTTACCTGGCTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CCA 90 bp | TGTTGGGTGCAGGCCACAGGGTTGATGCTGCAGAGCCCGGCATCCTaGTCCCTCTCAAAGTACACGCTGCCAGGGGAGAAGATAGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: CWVQATGLMLQSPAS*SLSKYTLPGEKIEG Trigger: TCCCTCTATCTTCTCCCCTGGCAGCGTGTACTTTGAGAGGGACCAGGATGCCGGGCTCTGCAGCATCAACCCTGTGGCCTGCACCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS TCA 90 bp | CTGGGCCTCCTCAAATACACACACAGCCCCTGGAAGCAGCTGGACTaGCCCCGTGCCCACCAGTACATGGATGTCCACCATTGTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LGLLKYTHSPWKQLD*PRAHQYMDVHHCGL Trigger: CAAGCCACAATGGTGGACATCCATGTACTGGTGGGCACGGGGTCAGTCCAGCTGCTTCCAGGGGCTGTGTGTGTATTTGAGGAGGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS GCA 90 bp | CCACAAGGCTTGAGCTGGCCAAACCACCATAGAAATGACCCCCGATaGCATTATGATGCCTTCGAAGGGGCAGTCCCTGGGCCTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PQGLSWPNHHRNDPR*HYDAFEGAVPGPPQ Trigger: TTGAGGAGGCCCAGGGACTGCCCCTTCGAAGGCATCATAATGGCATCGGGGGTCATTTCTATGGTGGTTTGGCCAGCTCAAGCCTTGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS-3UTR CAA 90 bp | ATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATCCCGGCCCCAGGTGCTaGGTCAGGAAGCTCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: MGTLSLSSDTPEESIRSHPGPRC*VRKLIT Trigger: TGTGATGAGCTTCCTGACCAAGCACCTGGGGCCGGG...ATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | AGAGAGCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGGAAAAGGAGGGTAAGTaGGGGACACAGTCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: REHQIPLQMVVSHHVVAGEKEGK*GTQSAS Trigger: GCTGGCAGACTGTGTCCCCAACTTACCCTCCTTTTC...CCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | ATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATAAGGTAGAAGACCTGTaGGACTACCCAGTCGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGTLSLSSDTPEESIRSHKVEDL*DYPVGR Trigger: CCTGCCGACTGGGTAGTCCAACAGGTCTTCTACCTT...ATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | GTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCGTCCACCATTGTGGCTaGATAGGGGCAATCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VYGYTVSVFRHTRREHQIVHHCG*IGAIHP Trigger: GGGGTGGATTGCCCCTATCAAGCCACAATGGTGGAC...GATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | GCATCAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAATTGGAAAGGTGGGTGCCTTaGGTAGCTCCACTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASDPITDGCEPPCGCRELERWVP*VAPLLS Trigger: TGAAAGAAGTGGAGCTACCAAAGGCACCCACCTTTC...CAATTCCCTGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS TCA 90 bp | CAGCTATCACCCAGTTTTTCAAACCTGCTACATCAAGGTCCAGTTTaGAGTGGAAAGCGTGTGTATGCACCGCTCCCAGCACTCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLSPSFSNLLHQGPV*SGKRVYAPLPALFL Trigger: GAGAAAGAGTGCTGGGAGCGGTGCATACACACGCTTTCCACTTCAAACTGGACCTTGATGTAGCAGGTTTGAAAAACTGGGTGATAGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CCA 90 bp | GTGCCAAGGTGGAGCCATTGTAGTTCAAGACAGAAGCCAGAAAGGTaGGTGCCTTTGGTAGCTCCACTTCTTTCAAATGCCTCCATATCT | + |
|
Preference number: 5 (lower is better) Translates to: VPRWSHCSSRQKPER*VPLVAPLLSNASIS Trigger: AGATATGGAGGCATTTGAAAGAAGTGGAGCTACCAAAGGCACCCACCTTTCTGGCTTCTGTCTTGAACTACAATGGCTCCACCTTGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTCATGGATGTCCACCATaGTGGCTTGATAGGGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSVFRHTRREHQIPLQMVHGCPP*WLDRGN Trigger: ATTGCCCCTATCAAGCCACAATGGTGGACATCCATG...AACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGACATCAAGGTCCAGTTaGAAGTGGAAAGCGTGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SVFRHTRREHQIPLQMVVTSRSS*KWKACV Trigger: TACACACGCTTTCCACTTCAAACTGGACCTTGATGT...CACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTCAGACACACCAGAAGAGAGCATCAGATCCCATTACAGATGGTTGTGCCTAAGAGGGTTTCATaGTTGATGAAGTCAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVFRHTRREHQIPLQMVVPKRVS*LMKSAK Trigger: TTTTGCTGACTTCATCAACAATGAAACCCTCTTAGG...CACAACCATCTGTAATGGGATCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS-3UTR CAA 90 bp | ATGTATATGGGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGAGCATCAGAAAGAGGGTTTCATTGTaGATGAAGTCAGCAAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: MYMGTLSLSSDTPEESIRKRVSL*MKSAKT Trigger: GGTTTTTGCTGACTTCATCAACAATGAAACCCTCTT...TCTGATGCTCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACCCATATACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041095.14 |
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| CDS TCA 72 bp | CTCAGGACCTGCCTGGTCAGCTGTGGGCGCTGTAGCTaGAGCTCTGGGTTCCAGGGGGCTGCTACAGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: LRTCLVSCGRCS*SSGFQGAATGL Trigger: TAAGCCTGTAGCAGCCCCCTGGAACCCAGAGCTTCAGCTACAGCGCCCACAGCTGACCAGGCAGGTCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CCA 72 bp | CAGGCCACAGGGTTGATGCTGCAGAGCCCGGCATCCTaGTCCCTCTCAAAGTACACGCTGCCAGGGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QATGLMLQSPAS*SLSKYTLPGEK Trigger: CTTCTCCCCTGGCAGCGTGTACTTTGAGAGGGACCAGGATGCCGGGCTCTGCAGCATCAACCCTGTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 90 bp | AAGTTGGGGACACAGTCTGCCAGCTGTTGGGTGCAGGCCACAGGGTaGATGCTGCAGAGCCCGGCATCCTGGTCCCTCTCAAAGTACACG | + |
|
Preference number: 6 (lower is better) Translates to: KLGTQSASCWVQATG*MLQSPASWSLSKYT Trigger: CGTGTACTTTGAGAGGGACCAGGATGCCGGGCTCTGCAGCATCAACCCTGTGGCCTGCACCCAACAGCTGGCAGACTGTGTCCCCAACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 90 bp | CAACTGGGCCAAGTCTGCATAGTAATGCCCAAGGTAGAAGACCTGTaGGACTACCCAGTCGGCAGGGTCCAGGGCCCCGTGGTCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: QLGQVCIVMPKVEDL*DYPVGRVQGPVVQQ Trigger: CTGTTGGACCACGGGGCCCTGGACCCTGCCGACTGGGTAGTCCAACAGGTCTTCTACCTTGGGCATTACTATGCAGACTTGGCCCAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 72 bp | CAAGTCTGCATAGTAATGCCCAAGGTAGAAGACCTGTaGGACTACCCAGTCGGCAGGGTCCAGGGCCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVCIVMPKVEDL*DYPVGRVQGPV Trigger: CACGGGGCCCTGGACCCTGCCGACTGGGTAGTCCAACAGGTCTTCTACCTTGGGCATTACTATGCAGACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS TCA 72 bp | CTCCAGCCCCACAGGGTGAAGGAACACTCCAAGACCTaGGATGTTATGGTAGAGGGCTATCCAGGTAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LQPHRVKEHSKT*DVMVEGYPGSS Trigger: CGAGCTACCTGGATAGCCCTCTACCATAACATCTCAGGTCTTGGAGTGTTCCTTCACCCTGTGGGGCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS GCA 72 bp | TTGAGCTGGCCAAACCACCATAGAAATGACCCCCGATaGCATTATGATGCCTTCGAAGGGGCAGTCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSWPNHHRNDPR*HYDAFEGAVPG Trigger: CCCAGGGACTGCCCCTTCGAAGGCATCATAATGGCATCGGGGGTCATTTCTATGGTGGTTTGGCCAGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 90 bp | GCTGTCACCCAAGCCACCAGATCCTCCCCTAAGAGGGTTTCATTGTaGATGAAGTCAGCAAAAACCGTAGCTGGGCTCCGCATGTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVTQATRSSPKRVSL*MKSAKTVAGLRMSF Trigger: GAACGACATGCGGAGCCCAGCTACGGTTTTTGCTGACTTCATCAACAATGAAACCCTCTTAGGGGAGGATCTGGTGGCTTGGGTGACAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS GCA 72 bp | ACATCAAGGTCCAGTTTGAAGTGGAAAGCGTGTGTATaGACCGCTCCCAGCACTCTTTCTCCCACACGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSRSSLKWKACV*TAPSTLSPTRF Trigger: GAACCGTGTGGGAGAAAGAGTGCTGGGAGCGGTGCATACACACGCTTTCCACTTCAAACTGGACCTTGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 72 bp | CAAGCCACCAGATCCTCCCCTAAGAGGGTTTCATTGTaGATGAAGTCAGCAAAAACCGTAGCTGGGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: QATRSSPKRVSL*MKSAKTVAGLR Trigger: GCGGAGCCCAGCTACGGTTTTTGCTGACTTCATCAACAATGAAACCCTCTTAGGGGAGGATCTGGTGGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 72 bp | ACCCAAGCCACCAGATCCTCCCCTAAGAGGGTTTCATaGTTGATGAAGTCAGCAAAAACCGTAGCTGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TQATRSSPKRVS*LMKSAKTVAGL Trigger: GAGCCCAGCTACGGTTTTTGCTGACTTCATCAACAATGAAACCCTCTTAGGGGAGGATCTGGTGGCTTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS TCA 72 bp | AGATGTAATCATAGTTGCCCACTGATGACACCGACCTaGCCACAAGGCTTGAGCTGGCCAAACCACCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: RCNHSCPLMTPT*PQGLSWPNHHR Trigger: TCTATGGTGGTTTGGCCAGCTCAAGCCTTGTGGTCAGGTCGGTGTCATCAGTGGGCAACTATGATTACATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 72 bp | ACCCAGTTTTTCAAACCTGCTACATCAAGGTCCAGTTaGAAGTGGAAAGCGTGTGTATGCACCGCTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TQFFKPATSRSS*KWKACVCTAPS Trigger: GCTGGGAGCGGTGCATACACACGCTTTCCACTTCAAACTGGACCTTGATGTAGCAGGTTTGAAAAACTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS GCA 72 bp | GCCAACTTTAAACTCCCATTCCAACTGGGCCAAGTCTaGATAGTAATGCCCAAGGTAGAAGACCTGTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ANFKLPFQLGQV*IVMPKVEDLLD Trigger: GTCCAACAGGTCTTCTACCTTGGGCATTACTATGCAGACTTGGCCCAGTTGGAATGGGAGTTTAAAGTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CCA 72 bp | CATAGCTGCTGTCCAAGTACCGGATCGTCATTGTTTTaGGGGAATCAGCACCATAAACTGTCAGACACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HSCCPSTGSSLF*GNQHHKLSDTP Trigger: AGGAGTGTCTGACAGTTTATGGTGCTGATTCCCCCAAAACAATGACGATCCGGTACTTGGACAGCAGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS TCA 72 bp | ATGACCAAAGGTAAATGTCCAGAGGGGAGATGTCACTaGGTTTCCCTGTATGTTATACTGGGGACCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MTKGKCPEGRCH*VSLYVILGTLK Trigger: CTTCAGGGTCCCCAGTATAACATACAGGGAAACTCAGTGACATCTCCCCTCTGGACATTTACCTTTGGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CCA 72 bp | GGTTTCATTGTTGATGAAGTCAGCAAAAACCGTAGCTaGGCTCCGCATGTCGTTCTGGTAATAGATGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GFIVDEVSKNRS*APHVVLVIDAA Trigger: AGCAGCATCTATTACCAGAACGACATGCGGAGCCCAGCTACGGTTTTTGCTGACTTCATCAACAATGAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 90 bp | TGGAGCCATTGTAGTTCAAGACAGAAGCCAGAAAGGTGGGTGCCTTaGGTAGCTCCACTTCTTTCAAATGCCTCCATATCTGAACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: WSHCSSRQKPERWVP*VAPLLSNASISEQT Trigger: AGTTTGTTCAGATATGGAGGCATTTGAAAGAAGTGGAGCTACCAAAGGCACCCACCTTTCTGGCTTCTGTCTTGAACTACAATGGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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| CDS CAA 72 bp | TGTAGTTCAAGACAGAAGCCAGAAAGGTGGGTGCCTTaGGTAGCTCCACTTCTTTCAAATGCCTCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: CSSRQKPERWVP*VAPLLSNASIS Trigger: AGATATGGAGGCATTTGAAAGAAGTGGAGCTACCAAAGGCACCCACCTTTCTGGCTTCTGTCTTGAACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041095.14 ENSMUST00000107264.2 |
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