Pregenerated sensors for AOAH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021322Ensembl transcript IDs: ENSMUST00000021757.5, ENSMUST00000221982.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGCTGCTGAAGAAGGTCTTCTGGGCCTGTTGCACAGCAGCCCCTaGAATGAGCAGGTGGGAGGGTTTATCCACCTTTCTCTCCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: EAAEEGLLGLLHSSP*NEQVGGFIHLSLPQ Trigger: CTGGGGGAGAGAAAGGTGGATAAACCCTCCCACCTGCTCATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGACCTTCTTCAGCAGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 90 bp | CTGAGAGGAAAGTGGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTaGGCCTGTTGCACAGCAGCCCCTGGAATGAGCAGGTGGGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: LRGKWSAERLLKKVF*ACCTAAPGMSRWEG Trigger: ACCCTCCCACCTGCTCATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR GCA 90 bp | AAGTGGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGGGCCTGTTaGACAGCAGCCCCTGGAATGAGCAGGTGGGAGGGTTTATCCACC | + |
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Preference number: 1 (lower is better) Translates to: KWSAERLLKKVFWAC*TAAPGMSRWEGLST Trigger: GGTGGATAAACCCTCCCACCTGCTCATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 90 bp | TTAATGGACATTGCCATTAAGGTCTGTCCCCAACTGAGAGGAAAGTaGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGGGCCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: LMDIAIKVCPQLRGK*SAERLLKKVFWACC Trigger: GCAACAGGCCCAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTGGGGACAGACCTTAATGGCAATGTCCATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR GCA 90 bp | TCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGGTCTTCTGGGCCTGTTaGACAGCAGCCCCTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: SSDPGILASPGVNCPQRWVFWAC*TAAPGM Trigger: CATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGAC...CCATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTAGAGAGGAAAGTGGTCTaGAGAGAGGCTGCTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KQDKRIRAVRGGGGPALLERKVV*REAAEE Trigger: TTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTC...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTATCAATAGTTCCTACTTaGCACTGTGGGGCCAACTGT | + |
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Preference number: 2 (lower is better) Translates to: KQDKRIRAVRGGGGPALLSIVPT*HCGANC Trigger: ACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGA...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAACTGAAGAAGGTCTTCTaGGCCTGTTGCACAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: WATPSTGVPLGVQRLNPKLKKVF*ACCTAA Trigger: GGCTGCTGTGCAACAGGCCCAGAAGACCTTCTTCAG...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAACAACTGAGAGGAAAGTaGTCTGCAGAGAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WATPSTGVPLGVQRLNPKQLRGK*SAERLL Trigger: CAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTG...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CCA 90 bp | ATTTCAATAGTTCCTACTTGCCACTGTGGGGCCAACTGTCTCATACCTGTGGGCCCTGGAATGAGCAGGTaGGAGGGTTTATCCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: ISIVPTCHCGANCLIPVGPGMSR*EGLSTF Trigger: AAAGGTGGATAAACCCTCCCACCTGCTCATTCCAGG...GCCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR GCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGAGTCCTGGAGTCAATTaGCCACAGAGATGGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RQFILEAGQENQGCKGWGSPGVN*PQRWRE Trigger: TTCTCTCCATCTCTGTGGGCAATTGACTCCAGGACT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CAA 90 bp | ACTTCCCTTTACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTaGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGAGAGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: TSLYKELECPQTLVS*QVLESIAHRDGEKT Trigger: AGTCTTCTCTCCATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGAGAGAAGACTTGCTGTaGGAAGCAAAGGACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: RQFILEAGQENQGCKGWGREDLL*EAKDIA Trigger: AGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR TCA 90 bp | GGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTGTAGGAAAGTGTTTCAGAGTTaGACAGAGAAGACTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GWGWASIAIRMCSGHCCRKVFQS*TEKTCC Trigger: ACAGCAAGTCTTCTCTGTTCAACTCTGAAACACTTT...CCTACAACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAAGACTCTAGTACAGATTaGAGTTCATATATGCACAGG | + |
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Preference number: 2 (lower is better) Translates to: WATPSTGVPLGVQRLNPKDSSTD*SSYMHR Trigger: CCTGTGCATATATGAACTTCAATCTGTACTAGAGTC...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGAATTGCCCACAGAGATaGAGAGAAGACTCTAGTACA | + |
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Preference number: 2 (lower is better) Translates to: RQFILEAGQENQGCKGWGNCPQR*REDSST Trigger: TGTACTAGAGTCTTCTCTCCATCTCTGTGGGCAATT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CAA 90 bp | GACACAGAAAAGAAAGTGATTGCTAGACTTCCCTTTACAAGGAACTaGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: DTEKKVIARLPFTRN*NVLRPWYPCKSWSQ Trigger: TTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGGAAGTCTAGCAATCACTTTCTTTTCTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR GCA 90 bp | AACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCATTGAAGTTCATATATaGACAGGAACTCTGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: NLNVLRPWYPCKSWSQLPIEVHI*TGTLIR Trigger: CCTGATCAGAGTTCCTGTGCATATATGAACTTCAAT...GGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR GCA 72 bp | GCAGAGAGGCTGCTGAAGAAGGTCTTCTGGGCCTGTTaGACAGCAGCCCCTGGAATGAGCAGGTGGGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: AERLLKKVFWAC*TAAPGMSRWEG Trigger: ACCCTCCCACCTGCTCATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGACCTTCTTCAGCAGCCTCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 72 bp | CTACTTGCCACTGTGGGGCCAACTGTCTCATACCTGTaGGCTACACCAAGCACAGGGGTACCTCTGGGCGTA | + |
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Preference number: 3 (lower is better) Translates to: LLATVGPTVSYL*ATPSTGVPLGV Trigger: TACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CAA 90 bp | ATTTCAATAGTTCCTACTTGCCACTGTGGGGCCAACTGTCTCATACCTGTGGGCGGTCTTCTGGGCCTGTaGCACAGCAGCCCCTGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ISIVPTCHCGANCLIPVGGLLGL*HSSPWN Trigger: ATTCCAGGGGCTGCTGTGCAACAGGCCCAGAAGACC...GCCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CAA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTAGGGAAGCAAAGGACATaGCTGTTAATGGACATTGCC | + |
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Preference number: 3 (lower is better) Translates to: KQDKRIRAVRGGGGPALLGKQRT*LLMDIA Trigger: GGCAATGTCCATTAACAGCAATGTCCTTTGCTTCCC...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAACAGACCCTGGTATCCTaGCAAGTCCTGGAGTCAATT | + |
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Preference number: 3 (lower is better) Translates to: WATPSTGVPLGVQRLNPKQTLVS*QVLESI Trigger: AATTGACTCCAGGACTTGCAAGGATACCAGGGTCTG...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CAA 90 bp | GGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTGTAGGCCCTTTACAAGGAACTaGAATGTCCTCAGACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: GWGWASIAIRMCSGHCCRPFTRN*NVLRPW Trigger: CCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGG...CCTACAACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 72 bp | ATTGCCATTAAGGTCTGTCCCCAACTGAGAGGAAAGTaGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: IAIKVCPQLRGK*SAERLLKKVFW Trigger: CCAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTGGGGACAGACCTTAATGGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR GCA 72 bp | ACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTTaGAAGTCCTGGAGTCAATTGCCCACAGAGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: TRNLNVLRPWYP*KSWSQLPTEME Trigger: CTCCATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 72 bp | TTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTaGAGTCAATTGCCCACAGAGATGGAGAGAAGACTC | + |
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Preference number: 3 (lower is better) Translates to: LNVLRPWYPCKS*SQLPTEMERRL Trigger: GAGTCTTCTCTCCATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR-3UTR CAA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTTGAACAGAGAAGACTaGCTGTGGGAAGCAAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: RQFILEAGQENQGCKGWGLNRED*LWEAKD Trigger: GTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAA...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 72 bp | CTTCCCTTTACAAGGAACTTGAATGTCCTCAGACCCTaGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACA | + |
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Preference number: 3 (lower is better) Translates to: LPFTRNLNVLRP*YPCKSWSQLPT Trigger: TGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR TCA 72 bp | GGGGCTGATGTAAGAAGTCCACCAAATGCCAGTAACTaGGGAGACTTGTGCATGATTTCAATAGTTCCTACT | + |
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Preference number: 3 (lower is better) Translates to: GADVRSPPNASN*GDLCMISIVPT Trigger: AGTAGGAACTATTGAAATCATGCACAAGTCTCCTCAGTTACTGGCATTTGGTGGACTTCTTACATCAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR TCA 72 bp | TGCCCACAGAGATGGAGAGAAGACTCTAGTACAGATTaGAGTTCATATATGCACAGGAACTCTGATCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CPQRWREDSSTD*SSYMHRNSDQD Trigger: ATCCTGATCAGAGTTCCTGTGCATATATGAACTTCAATCTGTACTAGAGTCTTCTCTCCATCTCTGTGGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CCA 72 bp | AAAAGTGTTTCAGAGTTGAACAGAGAAGACTTGCTGTaGGAAGCAAAGGACATTGCTGTTAATGGACATTGC | + |
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Preference number: 3 (lower is better) Translates to: KSVSELNREDLL*EAKDIAVNGHC Trigger: GCAATGTCCATTAACAGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAACTCTGAAACACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTAGGGCGGACGGCAGGTTaGGGAAGGAGTTCACAGACA | + |
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Preference number: 4 (lower is better) Translates to: KQDKRIRAVRGGGGPALLGRTAG*GRSSQT Trigger: TGTCTGTGAACTCCTTCCTCAACCTGCCGTCCGCCC...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | ATTTCAATAGTTCCTACTTGCCACTGTGGGGCCAACTGTCTCATACCTGTGGGCGGAGTAGCTGTCACCTaGCTGGTCCTCAGAGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISIVPTCHCGANCLIPVGGVAVT*LVLRGH Trigger: GTGCCCTCTGAGGACCAGCCAGGTGACAGCTACTCC...GCCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | GGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTGTAGGGGCCTCCTGGGGAAGTaGGTAGAGATGACACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: GWGWASIAIRMCSGHCCRGLLGK*VEMTLW Trigger: CCACAGTGTCATCTCTACCCACTTCCCCAGGAGGCC...CCTACAACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGTTACACCAGAGAGTTaGGGCCAGTTGAGCTCATCG | + |
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Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMVTPES*GQLSSS Trigger: CGATGAGCTCAACTGGCCCCAACTCTCTGGTGTAAC...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGTGAAGCCACCTCATTaGGGTGGAATCCATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMVKPPH*GGIHPQ Trigger: CTGTGGATGGATTCCACCCCAATGAGGTGGCTTCAC...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | TGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATAGTCTCCCAGCAAAATaGTTCCCCTGGGCTGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: CPQTLVSLQVLESIAHRDSLPAK*FPWAVN Trigger: GTTCACAGCCCAGGGGAATCATTTTGCTGGGAGACT...ATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | TGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATTTTCAGGCAGGTAGCTaGAGAGTCTCTCCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: CPQTLVSLQVLESIAHRDFQAGS*RVSPSP Trigger: TGGCGATGGAGAGACTCTGCAGCTACCTGCCTGAAA...ATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAAGGACAGCACCCCGCTTaGAAAATTCCAGAGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: WATPSTGVPLGVQRLNPKGQHPA*KIPEHS Trigger: GCTATGCTCTGGAATTTTGCAAGCGGGGTGCTGTCC...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAAGCCACCTCATTGGGGTaGAATCCATCCACAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: WATPSTGVPLGVQRLNPKATSLG*NPSTGS Trigger: TGAACCTGTGGATGGATTCCACCCCAATGAGGTGGC...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGACAGGTTCAATAAGCTaGCATGGCTGTCCACCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMTGSIS*HGCPPL Trigger: AAGAGGTGGACAGCCATGGCAGCTTATTGAACCTGT...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | TGTAAGGGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTCCGGAGGGTCTTGTTaGAAGACATCCAGCCGTTAC | + |
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Preference number: 4 (lower is better) Translates to: CKGWGWASIAIRMCSGHCSGGSC*KTSSRY Trigger: GTAACGGCTGGATGTCTTCCAACAAGACCCTCCGGA...ACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCCCTTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTAAACACTGTGCTTGTCTaGATCTATGTCTTTGAATGG | + |
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Preference number: 4 (lower is better) Translates to: KQDKRIRAVRGGGGPALLNTVLV*IYVFEW Trigger: CCATTCAAAGACATAGATTCAGACAAGCACAGTGTT...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGTTACAGTTGGAGTCCTaGTGGATATCCCAGTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMLQLES*WISQLS Trigger: AGACAACTGGGATATCCATCAGGACTCCAACTGTAA...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCAATGGCTGGATGGTCTaGTGCCTGGTTCCTAGACAA | + |
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Preference number: 4 (lower is better) Translates to: NLNVLRPWYPCKSWSQLPNGWMV*CLVPRQ Trigger: TTGTCTAGGAACCAGGCATCAGACCATCCAGCCATT...GGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGAGCCGTTACAGGGATTaGGCTGCAGGCATCTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RQFILEAGQENQGCKGWGSRYRD*AAGILE Trigger: TTCTAAGATGCCTGCAGCTCAATCCCTGTAACGGCT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGATTTGCTTGCAGAAGTaGAGCCACCTCATTGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQFILEAGQENQGCKGWGICLQK*SHLIGV Trigger: CACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAAT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTGTAGGGGGTGGTATCGGTTGTaGAAGCTATCCCAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GWGWASIAIRMCSGHCCRGWYRL*KLSQRK Trigger: TTTTCTCTGGGATAGCTTGCACAACCGATACCACCC...CCTACAACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | TCCCCAACTGAGAGGAAAGTGGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGAGGAGTGGTCATTTCTaGTACTGTGTCAGCTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SPTERKVVCREAAEEGLLRSGHF*YCVSFR Trigger: TCGAAAGCTGACACAGTACCAGAAATGACCACTCCT...CAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CAA 72 bp | CTGAGGAGACTTGTGCATGATTTCAATAGTTCCTACTaGCCACTGTGGGGCCAACTGTCTCATACCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRRLVHDFNSSY*PLWGQLSHTCG Trigger: CCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGAAATCATGCACAAGTCTCCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | TGTTTCAGAGTTGAACAGAGAAGACTTGCTGTGGGAAGCAAAGGACATTGCTGTGGGCACAGAGGCCAATaGGTGAGAGAGCAGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CFRVEQRRLAVGSKGHCCGHRGQ*VREQKK Trigger: CTTCTTCTGCTCTCTCACTCATTGGCCTCTGTGCCC...ACAGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAACTCTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | AACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCTGGACTGAAGAGTTGTaGACTTCAGCCAGTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLNVLRPWYPCKSWSQLPWTEEL*TSASCS Trigger: TGAGCAACTGGCTGAAGTTCACAACTCTTCAGTCCA...GGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | TGTAAGGGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTCTGCCATTGGGCAGGTaGGAATTTAGATGTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CKGWGWASIAIRMCSGHCLPLGR*EFRCVR Trigger: TCTGACACATCTAAATTCTCACCTGCCCAATGGCAG...ACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCCCTTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAATTACAGGGATTGAGCTaGAGGCATCTTAGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WATPSTGVPLGVQRLNPKLQGLS*RHLRKE Trigger: CTCCTTTCTAAGATGCCTGCAGCTCAATCCCTGTAA...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | AACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCTGGCATAAAGGACAATaGCTGGATGGTCTGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLNVLRPWYPCKSWSQLPWHKGQ*LDGLMP Trigger: AGGCATCAGACCATCCAGCCATTGTCCTTTATGCCA...GGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| 3UTR CAA 72 bp | TACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTaGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: YKELECPQTLVS*QVLESIAHRDG Trigger: TCCATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGGTTGGGAAAACACTGTaGTTGTCTGAATCTATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMVGKTL*LSESMS Trigger: AGACATAGATTCAGACAAGCACAGTGTTTTCCCAAC...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGTGTCCACCTCTTTTCTaGCAGTCCTCTATTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMCPPLF*QSSIIS Trigger: TGAAATAATAGAGGACTGGCAGAAAAGAGGTGGACA...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGAGTTGAACAGAGAAGACTTGCTGTGGGAAGCAAAGGACATTGCTGTGTAGAGATGACACTGTaGTTGGACAGCACCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CFRVEQRRLAVGSKGHCCVEMTL*LDSTPL Trigger: AAGCGGGGTGCTGTCCAACCACAGTGTCATCTCTAC...ACAGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAACTCTGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | GGGTGGGGGTGGGCCAGCATTGCTATAAGAATGTGTTCAGGTCATTGTTGTAGGAATCTGAGAGTTGAATaGATTCTCCTTTCCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWGWASIAIRMCSGHCCRNLRVE*ILLSQD Trigger: GTCCTGGGAAAGGAGAATCCATTCAACTCTCAGATT...CCTACAACAATGACCTGAACACATTCTTATAGCAATGCTGGCCCACCCCCACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | ATTGCTAGACTTCCCTTTACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTGTTCACAGACATCTGTaGAGCTGTCAGCCATTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IARLPFTRNLNVLRPWYPVHRHL*SCQPFR Trigger: CCTGAATGGCTGACAGCTTCACAGATGTCTGTGAAC...AGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGGAAGTCTAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGCTTCAATTCCACTCGTaGAGTCCAGAAATCCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQFILEAGQENQGCKGWGLQFHS*SPEIQL Trigger: TAACTGGATTTCTGGACTCCACGAGTGGAATTGAAG...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGCATCGTTTCCAATCATaGCATAAAGGACAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQFILEAGQENQGCKGWGHRFQS*HKGQWL Trigger: CAGCCATTGTCCTTTATGCCATGATTGGAAACGATG...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTTTTCTGGCAGATCTTaGTCAAAAATGGTAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQFILEAGQENQGCKGWGFSGRS*SKMVGN Trigger: GTTCCCTACCATTTTTGACCAAGATCTGCCAGAAAA...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR TCA 90 bp | TACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCACATCGAGTAGTTTTATaGTGTCTGAGCCAAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKELECPQTLVSLQVLESHRVVL*CLSQMS Trigger: AGACATTTGGCTCAGACATCATAAAACTACTCGATG...TGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | TGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATAAAGGAGAAGAACTGTaGATAGGTCACATCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: CPQTLVSLQVLESIAHRDKGEEL*IGHIFI Trigger: AATAAAGATGTGACCTATGCACAGTTCTTCTCCTTT...ATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| 3UTR CAA 72 bp | AAGAAAGTGATTGCTAGACTTCCCTTTACAAGGAACTaGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKVIARLPFTRN*NVLRPWYPCKS Trigger: GGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTAAAGGGAAGTCTAGCAATCACTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GAGGCAAATATTGGAGTGCAGACAGTTTATTTTGGAAGCAGGACAAGAGAATCACAGACACGATTTGCTTaGAGAAGTGAAGCCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EANIGVQTVYFGSRTRESQTRFA*RSEATS Trigger: TGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTG...TGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCTGCACTCCAATATTTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CAA 72 bp | TTATTGAGGCAAATATTGGAGTGCAGACAGTTTATTTaGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRQILECRQFI*EAGQENQGCKG Trigger: CCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCTGCACTCCAATATTTGCCTCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GAGGCAAATATTGGAGTGCAGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGATCAATACCCCAGATaGCATTACAGTTGGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EANIGVQTVYFGSRTRESDQYPR*HYSWSP Trigger: AGGACTCCAACTGTAATGGCATCTGGGGTATTGATC...TGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCTGCACTCCAATATTTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | CCTAAATCTGTGGCATCTCAGAAAAGGCTGAGGAAAGTGAGACACAGAAAAGAAATCTATGTCTTTGAATaGCACGGCCTTCTTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKSVASQKRLRKVRHRKEIYVFE*HGLLYR Trigger: TCTATAAAGAAGGCCGTGCCATTCAAAGACATAGAT...TTCTTTTCTGTGTCTCACTTTCCTCAGCCTTTTCTGAGATGCCACAGATTTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| 3UTR CAA 72 bp | ATTGGAAAAAGTGTTTCAGAGTTGAACAGAGAAGACTaGCTGTGGGAAGCAAAGGACATTGCTGTTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGKSVSELNRED*LWEAKDIAVNG Trigger: TCCATTAACAGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAACTCTGAAACACTTTTTCCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR GCA 90 bp | GAGGCAAATATTGGAGTGCAGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGATAGTCTCTGTGATTaGAATGGTTTCTCTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EANIGVQTVYFGSRTRESDSLCD*NGFSFS Trigger: TGAGAAAGAGAAACCATTGCAATCACAGAGACTATC...TGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCTGCACTCCAATATTTGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CCA 90 bp | ATGCACAGGAACTCTGATCAGGATCCTTGTAGAAAATGGTATATAGTATTTGTAAGATGCCATTACAGTTaGAGTCCTGATGGATATCCC | + |
|
Preference number: 4 (lower is better) Translates to: MHRNSDQDPCRKWYIVFVRCHYS*SPDGYP Trigger: GGGATATCCATCAGGACTCCAACTGTAATGGCATCT...TACAAATACTATATACCATTTTCTACAAGGATCCTGATCAGAGTTCCTGTGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 90 bp | TCAATTCCACTCGTGGAGTCCAGAAATCCAGTTACACCAGAGAGTTaGGGCCAGTTGAGCTCATCGGTAAGGGCGGACGGCAGGTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SIPLVESRNPVTPES*GQLSSSVRADGRLR Trigger: CCTCAACCTGCCGTCCGCCCTTACCGATGAGCTCAACTGGCCCCAACTCTCTGGTGTAACTGGATTTCTGGACTCCACGAGTGGAATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | AAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTGGGCCAGCATTGCTAAGAGGGTGGTATCGGTaGTGCAAGCTATCCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQDKRIRAVRGGGGPALLRGWYR*CKLSQR Trigger: TCTCTGGGATAGCTTGCACAACCGATACCACCCTCT...TAGCAATGCTGGCCCACCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | TCCCCAACTGAGAGGAAAGTGGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGGTCCGGAGGGTCTTGTaGGAAGACATCCAGCCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPTERKVVCREAAEEGLLVRRVL*EDIQPL Trigger: TAACGGCTGGATGTCTTCCAACAAGACCCTCCGGAC...CAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | TGGGCTACACCAAGCACAGGGGTACCTCTGGGCGTACAAAGATTGAACCCTAAAAGAGTCCGGAGGGTCTaGTTGGAAGACATCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WATPSTGVPLGVQRLNPKRVRRV*LEDIQP Trigger: CGGCTGGATGTCTTCCAACAAGACCCTCCGGACTCT...TTTAGGGTTCAATCTTTGTACGCCCAGAGGTACCCCTGTGCTTGGTGTAGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 90 bp | TCCCAGACACGATTTGCTTGCAGAAGTGAAGCCACCTCATTGGGGTaGAATCCATCCACAGGTTCAATAAGCTGCCATGGCTGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SQTRFACRSEATSLG*NPSTGSISCHGCPP Trigger: AGGTGGACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | GTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTGCCCACAGAGATGCCCGGGTACACTGTCTaGTCACTGTCATTACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLRPWYPCKSWSQLPTEMPGYTV*SLSLQS Trigger: TGACTGTAATGACAGTGACAAGACAGTGTACCCGGG...CATCTCTGTGGGCAATTGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 90 bp | CTTTTCAGGCAGGTAGCTGCAGAGTCTCTCCATCGCCACCTGGACTaGAGAGTTGTGAACTTCAGCCAGTTGCTCAATCACAGATACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFRQVAAESLHRHLD*RVVNFSQLLNHRYQ Trigger: CTGGTATCTGTGATTGAGCAACTGGCTGAAGTTCACAACTCTTCAGTCCAGGTGGCGATGGAGAGACTCTGCAGCTACCTGCCTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021757.5 ENSMUST00000221982.2 |
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| CDS TCA 90 bp | GAGTCCGGAGGGTCTTGTTGGAAGACATCCAGCCGTTACAGGGATTaGGCTGCAGGCATCTTAGAAAGGAGAAGAACTGTGCATAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ESGGSCWKTSSRYRD*AAGILERRRTVHRS Trigger: TGACCTATGCACAGTTCTTCTCCTTTCTAAGATGCCTGCAGCTCAATCCCTGTAACGGCTGGATGTCTTCCAACAAGACCCTCCGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | ATTTCAATAGTTCCTACTTGCCACTGTGGGGCCAACTGTCTCATACCTGTGGGCCAGCCGTTACAGGGATaGAGCTGCAGGCATCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ISIVPTCHCGANCLIPVGQPLQG*SCRHLR Trigger: TCTAAGATGCCTGCAGCTCAATCCCTGTAACGGCTG...GCCCACAGGTATGAGACAGTTGGCCCCACAGTGGCAAGTAGGAACTATTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGAGTGAAGCCACCTCATaGGGGTGGAATCCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RQFILEAGQENQGCKGWGSEATS*GWNPST Trigger: TGTGGATGGATTCCACCCCAATGAGGTGGCTTCACT...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 90 bp | ATGGAATTCCATCTTTCGGATCAATACCCCAGATGCCATTACAGTTaGAGTCCTGATGGATATCCCAGTTGTCTGGCCTTCTGCCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MEFHLSDQYPRCHYS*SPDGYPSCLAFCPG Trigger: ACCCGGGCAGAAGGCCAGACAACTGGGATATCCATCAGGACTCCAACTGTAATGGCATCTGGGGTATTGATCCGAAAGATGGAATTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS TCA 90 bp | GGCTGCCATTGGGCAGGTGAGAATTTAGATGTGTCAGAGTCTGCATaGCGTTGGCGTACATTTGTTCAGGAGTGGTCATTTCTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GCHWAGENLDVSESA*RWRTFVQEWSFLVL Trigger: CAGTACCAGAAATGACCACTCCTGAACAAATGTACGCCAACGTCATGCAGACTCTGACACATCTAAATTCTCACCTGCCCAATGGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS GCA 90 bp | GAAGCCACCTCATTGGGGTGGAATCCATCCACAGGTTCAATAAGCTaGCATGGCTGTCCACCTCTTTTCTGCCAGTCCTCTATTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EATSLGWNPSTGSIS*HGCPPLFCQSSIIS Trigger: TGAAATAATAGAGGACTGGCAGAAAAGAGGTGGACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS CCA 90 bp | CACCTCATTGGGGTGGAATCCATCCACAGGTTCAATAAGCTGCCATaGCTGTCCACCTCTTTTCTGCCAGTCCTCTATTATTTCATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLIGVESIHRFNKLP*LSTSFLPVLYYFME Trigger: TTCCATGAAATAATAGAGGACTGGCAGAAAAGAGGTGGACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS TCA 90 bp | CCATCTGGTAAGCCGTATAAAATAACGTGGCTGCCATTGGGCAGGTaGGAATTTAGATGTGTCAGAGTCTGCATGACGTTGGCGTACATT | + |
|
Preference number: 5 (lower is better) Translates to: PSGKPYKITWLPLGR*EFRCVRVCMTLAYI Trigger: AATGTACGCCAACGTCATGCAGACTCTGACACATCTAAATTCTCACCTGCCCAATGGCAGCCACGTTATTTTATACGGCTTACCAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS TCA 90 bp | CCATTGAAGCTGTATCTTTTCCCAGACACGATTTGCTTGCAGAAGTaGAGCCACCTCATTGGGGTGGAATCCATCCACAGGTTCAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLKLYLFPDTICLQK*SHLIGVESIHRFNK Trigger: CTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGAAAAGATACAGCTTCAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS CCA 90 bp | GTGTCCTCCTTGGTCTCCAAACACCTCTTCAATCTGAGAGTTGAATaGATTCTCCTTTCCCAGGACATGAGGCCATTGAAGCTGTATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSSLVSKHLFNLRVE*ILLSQDMRPLKLYL Trigger: AAGATACAGCTTCAATGGCCTCATGTCCTGGGAAAGGAGAATCCATTCAACTCTCAGATTGAAGAGGTGTTTGGAGACCAAGGAGGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
||
| CDS-3UTR CAA 90 bp | AGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAGGGCTGTAAGGGGTGGGGGTCTGAATCTATGTCTTaGAATGGCACGGCCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RQFILEAGQENQGCKGWGSESMS*NGTAFF Trigger: AAAGAAGGCCGTGCCATTCAAAGACATAGATTCAGA...CCCCCACCCCTTACAGCCCTGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | TCCCCAACTGAGAGGAAAGTGGTCTGCAGAGAGGCTGCTGAAGAAGGTCTTCTGAAGATGCACCATTTTTaGAGATACTCTGATAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SPTERKVVCREAAEEGLLKMHHF*RYSDSL Trigger: GAGACTATCAGAGTATCTCAAAAAATGGTGCATCTT...CAGAAGACCTTCTTCAGCAGCCTCTCTGCAGACCACTTTCCTCTCAGTTGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | TGTTTCAGAGTTGAACAGAGAAGACTTGCTGTGGGAAGCAAAGGACATTGCTGTGTGAACTTCAGCCAGTaGCTCAATCACAGATACCAG | + |
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Preference number: 5 (lower is better) Translates to: CFRVEQRRLAVGSKGHCCVNFSQ*LNHRYQ Trigger: CTGGTATCTGTGATTGAGCAACTGGCTGAAGTTCAC...ACAGCAATGTCCTTTGCTTCCCACAGCAAGTCTTCTCTGTTCAACTCTGAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | ATGCACAGGAACTCTGATCAGGATCCTTGTAGAAAATGGTATATAGTATTTGTAGAGAGTTGGGGCCAGTaGAGCTCATCGGTAAGGGCG | + |
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Preference number: 5 (lower is better) Translates to: MHRNSDQDPCRKWYIVFVESWGQ*SSSVRA Trigger: CGCCCTTACCGATGAGCTCAACTGGCCCCAACTCTC...TACAAATACTATATACCATTTTCTACAAGGATCCTGATCAGAGTTCCTGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | TACAAGGAACTTGAATGTCCTCAGACCCTGGTATCCTTGCAAGTCCTGGAGTCAATTTTCTGGCAGATCTaGGTCAAAAATGGTAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: YKELECPQTLVSLQVLESIFWQI*VKNGRE Trigger: TTCCCTACCATTTTTGACCAAGATCTGCCAGAAAAT...TGACTCCAGGACTTGCAAGGATACCAGGGTCTGAGGACATTCAAGTTCCTTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | GAGGCAAATATTGGAGTGCAGACAGTTTATTTTGGAAGCAGGACAAGAGAATCAAGAGTCTGCATGACGTaGGCGTACATTTGTTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: EANIGVQTVYFGSRTRESRVCMT*AYICSG Trigger: TCCTGAACAAATGTACGCCAACGTCATGCAGACTCT...TGATTCTCTTGTCCTGCTTCCAAAATAAACTGTCTGCACTCCAATATTTGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | CCTAAATCTGTGGCATCTCAGAAAAGGCTGAGGAAAGTGAGACACAGAAAAGAAGGGAAAACACTGTGCTaGTCTGAATCTATGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PKSVASQKRLRKVRHRKEGKTLC*SESMSL Trigger: CAAAGACATAGATTCAGACAAGCACAGTGTTTTCCC...TTCTTTTCTGTGTCTCACTTTCCTCAGCCTTTTCTGAGATGCCACAGATTTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 90 bp | AACATCGTTTCCAATCATGGCATAAAGGACAATGGCTGGATGGTCTaGTGCCTGGTTCCTAGACAAGCTTTCAATAAAATTCTTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: NIVSNHGIKDNGWMV*CLVPRQAFNKILQI Trigger: AATCTGAAGAATTTTATTGAAAGCTTGTCTAGGAACCAGGCATCAGACCATCCAGCCATTGTCCTTTATGCCATGATTGGAAACGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS-3UTR CAA 90 bp | ATGCACAGGAACTCTGATCAGGATCCTTGTAGAAAATGGTATATAGTATTTGTACAGGACATGAGGCCATaGAAGCTGTATCTTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: MHRNSDQDPCRKWYIVFVQDMRP*KLYLFP Trigger: TGGGAAAAGATACAGCTTCAATGGCCTCATGTCCTG...TACAAATACTATATACCATTTTCTACAAGGATCCTGATCAGAGTTCCTGTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 90 bp | ATGTCTTTGAATGGCACGGCCTTCTTTATAGATAATTCAATTTTCTaGCAGATCTTGGTCAAAAATGGTAGGGAACAAATGTTACGACCA | + |
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Preference number: 5 (lower is better) Translates to: MSLNGTAFFIDNSIF*QILVKNGREQMLRP Trigger: TGGTCGTAACATTTGTTCCCTACCATTTTTGACCAAGATCTGCCAGAAAATTGAATTATCTATAAAGAAGGCCGTGCCATTCAAAGACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | CTCGTGGAGTCCAGAAATCCAGTTACACCAGAGAGTTaGGGCCAGTTGAGCTCATCGGTAAGGGCGGACGGC | + |
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Preference number: 6 (lower is better) Translates to: LVESRNPVTPES*GQLSSSVRADG Trigger: GCCGTCCGCCCTTACCGATGAGCTCAACTGGCCCCAACTCTCTGGTGTAACTGGATTTCTGGACTCCACGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | ACGACCACTTCTGGGATATTTCATGGTAGAGGACCTCCTGAGGACTaGTCTCGCCTTCTCCAGTGCAGACTCCCAGGCCTCCTGGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TTTSGIFHGRGPPED*SRLLQCRLPGLLGK Trigger: CTTCCCCAGGAGGCCTGGGAGTCTGCACTGGAGAAGGCGAGACAAGTCCTCAGGAGGTCCTCTACCATGAAATATCCCAGAAGTGGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | CTCGTGGAGTCCAGAAATCCAGTTACACCAGAGAGTTGGGGCCAGTaGAGCTCATCGGTAAGGGCGGACGGCAGGTTGAGGAAGGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LVESRNPVTPESWGQ*SSSVRADGRLRKEF Trigger: GAACTCCTTCCTCAACCTGCCGTCCGCCCTTACCGATGAGCTCAACTGGCCCCAACTCTCTGGTGTAACTGGATTTCTGGACTCCACGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 72 bp | GGCCAGTTGAGCTCATCGGTAAGGGCGGACGGCAGGTaGAGGAAGGAGTTCACAGACATCTGTGAAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GQLSSSVRADGR*RKEFTDICEAV Trigger: GACAGCTTCACAGATGTCTGTGAACTCCTTCCTCAACCTGCCGTCCGCCCTTACCGATGAGCTCAACTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | GAGAGTTGGGGCCAGTTGAGCTCATCGGTAAGGGCGGACGGCAGGTaGAGGAAGGAGTTCACAGACATCTGTGAAGCTGTCAGCCATTCA | + |
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Preference number: 6 (lower is better) Translates to: ESWGQLSSSVRADGR*RKEFTDICEAVSHS Trigger: TGAATGGCTGACAGCTTCACAGATGTCTGTGAACTCCTTCCTCAACCTGCCGTCCGCCCTTACCGATGAGCTCAACTGGCCCCAACTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS GCA 72 bp | AGGCGGTCTTCAAGAACAGCTTTTCAGGCAGGTAGCTaGAGAGTCTCTCCATCGCCACCTGGACTGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: RRSSRTAFQAGS*RVSPSPPGLKS Trigger: ACTCTTCAGTCCAGGTGGCGATGGAGAGACTCTGCAGCTACCTGCCTGAAAAGCTGTTCTTGAAGACCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021757.5 ENSMUST00000221982.2 |
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| CDS CAA 72 bp | TACAGTCACGCCCTCGCCAGTGGTAGCCCCGCAGCGTaGGGAAAACACTGTGCTTGTCTGAATCTATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSHALASGSPAA*GKHCACLNLCL Trigger: AAGACATAGATTCAGACAAGCACAGTGTTTTCCCAACGCTGCGGGGCTACCACTGGCGAGGGCGTGACTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | GAGAGTTGTTCGGCTCTCTCTGAAGTGAGAGTCCGGAGGGTCTTGTaGGAAGACATCCAGCCGTTACAGGGATTGAGCTGCAGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: ESCSALSEVRVRRVL*EDIQPLQGLSCRHL Trigger: AAGATGCCTGCAGCTCAATCCCTGTAACGGCTGGATGTCTTCCAACAAGACCCTCCGGACTCTCACTTCAGAGAGAGCCGAACAACTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | TTGGAGAGTTGTTCGGCTCTCTCTGAAGTGAGAGTCCGGAGGGTCTaGTTGGAAGACATCCAGCCGTTACAGGGATTGAGCTGCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: LESCSALSEVRVRRV*LEDIQPLQGLSCRH Trigger: ATGCCTGCAGCTCAATCCCTGTAACGGCTGGATGTCTTCCAACAAGACCCTCCGGACTCTCACTTCAGAGAGAGCCGAACAACTCTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 72 bp | CAGGTAGCTGCAGAGTCTCTCCATCGCCACCTGGACTaGAGAGTTGTGAACTTCAGCCAGTTGCTCAATCAC | + |
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Preference number: 6 (lower is better) Translates to: QVAAESLHRHLD*RVVNFSQLLNH Trigger: GTGATTGAGCAACTGGCTGAAGTTCACAACTCTTCAGTCCAGGTGGCGATGGAGAGACTCTGCAGCTACCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021757.5 ENSMUST00000221982.2 |
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| CDS GCA 72 bp | GGTAGAGATGACACTGTGGTTGGACAGCACCCCGCTTaGAAAATTCCAGAGCATAGCACACCACATCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: GRDDTVVGQHPA*KIPEHSTPHQP Trigger: AGGCTGATGTGGTGTGCTATGCTCTGGAATTTTGCAAGCGGGGTGCTGTCCAACCACAGTGTCATCTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021757.5 ENSMUST00000221982.2 |
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| CDS GCA 72 bp | TCATTGGGGTGGAATCCATCCACAGGTTCAATAAGCTaGCATGGCTGTCCACCTCTTTTCTGCCAGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLGWNPSTGSIS*HGCPPLFCQSS Trigger: AGAGGACTGGCAGAAAAGAGGTGGACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | CCAGGACATGAGGCCATTGAAGCTGTATCTTTTCCCAGACACGATTaGCTTGCAGAAGTGAAGCCACCTCATTGGGGTGGAATCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: PGHEAIEAVSFPRHD*LAEVKPPHWGGIHP Trigger: TGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGAAAAGATACAGCTTCAATGGCCTCATGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 72 bp | CAGAGTCTCTCCATCGCCACCTGGACTGAAGAGTTGTaGACTTCAGCCAGTTGCTCAATCACAGATACCAGT | + |
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Preference number: 6 (lower is better) Translates to: QSLSIATWTEEL*TSASCSITDTS Trigger: ACTGGTATCTGTGATTGAGCAACTGGCTGAAGTTCACAACTCTTCAGTCCAGGTGGCGATGGAGAGACTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021757.5 ENSMUST00000221982.2 |
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| CDS TCA 72 bp | GGGTCTTGTTGGAAGACATCCAGCCGTTACAGGGATTaGGCTGCAGGCATCTTAGAAAGGAGAAGAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSCWKTSSRYRD*AAGILERRRTV Trigger: CACAGTTCTTCTCCTTTCTAAGATGCCTGCAGCTCAATCCCTGTAACGGCTGGATGTCTTCCAACAAGACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 72 bp | CTGTATCTTTTCCCAGACACGATTTGCTTGCAGAAGTaGAGCCACCTCATTGGGGTGGAATCCATCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LYLFPDTICLQK*SHLIGVESIHR Trigger: CCTGTGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGAAAAGATACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | GGGGTGGAATCCATCCACAGGTTCAATAAGCTGCCATaGCTGTCCACCTCTTTTCTGCCAGTCCTCTATTAT | + |
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Preference number: 6 (lower is better) Translates to: GVESIHRFNKLP*LSTSFLPVLYY Trigger: ATAATAGAGGACTGGCAGAAAAGAGGTGGACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 72 bp | CAGACACGATTTGCTTGCAGAAGTGAAGCCACCTCATaGGGGTGGAATCCATCCACAGGTTCAATAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: QTRFACRSEATS*GWNPSTGSISC Trigger: GCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 72 bp | GAGGCCATTGAAGCTGTATCTTTTCCCAGACACGATTaGCTTGCAGAAGTGAAGCCACCTCATTGGGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EAIEAVSFPRHD*LAEVKPPHWGG Trigger: TCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGAAAAGATACAGCTTCAATGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 90 bp | ATCTTTTCCCAGACACGATTTGCTTGCAGAAGTGAAGCCACCTCATaGGGGTGGAATCCATCCACAGGTTCAATAAGCTGCCATGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: IFSQTRFACRSEATS*GWNPSTGSISCHGC Trigger: ACAGCCATGGCAGCTTATTGAACCTGTGGATGGATTCCACCCCAATGAGGTGGCTTCACTTCTGCAAGCAAATCGTGTCTGGGAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | CATCTTTCGGATCAATACCCCAGATGCCATTACAGTTaGAGTCCTGATGGATATCCCAGTTGTCTGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: HLSDQYPRCHYS*SPDGYPSCLAF Trigger: GAAGGCCAGACAACTGGGATATCCATCAGGACTCCAACTGTAATGGCATCTGGGGTATTGATCCGAAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 72 bp | AGGGTCTTGTTGGAAGACATCCAGCCGTTACAGGGATaGAGCTGCAGGCATCTTAGAAAGGAGAAGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: RVLLEDIQPLQG*SCRHLRKEKNC Trigger: ACAGTTCTTCTCCTTTCTAAGATGCCTGCAGCTCAATCCCTGTAACGGCTGGATGTCTTCCAACAAGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 72 bp | AAGCCGTATAAAATAACGTGGCTGCCATTGGGCAGGTaGGAATTTAGATGTGTCAGAGTCTGCATGACGTTG | + |
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Preference number: 6 (lower is better) Translates to: KPYKITWLPLGR*EFRCVRVCMTL Trigger: CAACGTCATGCAGACTCTGACACATCTAAATTCTCACCTGCCCAATGGCAGCCACGTTATTTTATACGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | TTGGTCTCCAAACACCTCTTCAATCTGAGAGTTGAATaGATTCTCCTTTCCCAGGACATGAGGCCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVSKHLFNLRVE*ILLSQDMRPLK Trigger: CTTCAATGGCCTCATGTCCTGGGAAAGGAGAATCCATTCAACTCTCAGATTGAAGAGGTGTTTGGAGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CAA 72 bp | GTTGAATGGATTCTCCTTTCCCAGGACATGAGGCCATaGAAGCTGTATCTTTTCCCAGACACGATTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VEWILLSQDMRP*KLYLFPDTICL Trigger: CAAGCAAATCGTGTCTGGGAAAAGATACAGCTTCAATGGCCTCATGTCCTGGGAAAGGAGAATCCATTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | AACGATGGTAAATGGATTTTTCTTCAATTCCACTCGTaGAGTCCAGAAATCCAGTTACACCAGAGAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: NDGKWIFLQFHS*SPEIQLHQRVG Trigger: CCCAACTCTCTGGTGTAACTGGATTTCTGGACTCCACGAGTGGAATTGAAGAAAAATCCATTTACCATCGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS CCA 72 bp | TGTCAGCTTTCGAATTACAAACATCGTTTCCAATCATaGCATAAAGGACAATGGCTGGATGGTCTGATGCCT | + |
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Preference number: 6 (lower is better) Translates to: CQLSNYKHRFQS*HKGQWLDGLMP Trigger: AGGCATCAGACCATCCAGCCATTGTCCTTTATGCCATGATTGGAAACGATGTTTGTAATTCGAAAGCTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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| CDS TCA 72 bp | TCCAATCATGGCATAAAGGACAATGGCTGGATGGTCTaGTGCCTGGTTCCTAGACAAGCTTTCAATAAAATT | + |
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Preference number: 6 (lower is better) Translates to: SNHGIKDNGWMV*CLVPRQAFNKI Trigger: AATTTTATTGAAAGCTTGTCTAGGAACCAGGCATCAGACCATCCAGCCATTGTCCTTTATGCCATGATTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021757.5 |
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