Pregenerated sensors for ANXA9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015702Ensembl transcript IDs: ENSMUST00000015846.9, ENSMUST00000107183.8, ENSMUST00000123365.2, ENSMUST00000164406.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGTTGAGGAATGTGAACAGGGGAGGAGCCAGGGAGGCGACAGGTTaGCTGTCATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTG | + |
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Preference number: 1 (lower is better) Translates to: RLRNVNRGGAREATG*LSFLTEPAGGTQML Trigger: CAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCCTGTTCACATTCCTCAACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR CCA 90 bp | TCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTaGGGTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGT | + |
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Preference number: 1 (lower is better) Translates to: SEVQPREEARVHGVP*GSSMFSTKYGNLSG Trigger: ACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR TCA 90 bp | GACTCCCGTTACTCCTCTCTAGAATGGAGCTGGAAGATGCCAGTCTaGGAAGAGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: DSRYSSLEWSWKMPV*EEGNPKELRGPASR Trigger: TCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTAACGGGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164406.8 |
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| 3UTR CCA 90 bp | CCAAAGGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATaGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: PKELRGPASRGGQGA*CSLGFFHVFNQIWE Trigger: TTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCCTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR TCA 90 bp | AACTCCCGTTACTCCTCTCTAGAATGGAGCTGGAAGATGCCAGTCTaGGAAGAGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGA | + |
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Preference number: 1 (lower is better) Translates to: NSRYSSLEWSWKMPV*EEGNPKELRGPASR Trigger: TCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTAACGGGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR TCA 90 bp | TGGCTGAGCATACTTCAAAGGCACCTCAACTCCATGGCCTCCTCCTaGTCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAA | + |
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Preference number: 1 (lower is better) Translates to: WLSILQRHLNSMASS*SMASSTQTLTRKQK Trigger: TTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGATCAGGAGGAGGCCATGGAGTTGAGGTGCCTTTGAAGTATGCTCAGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR TCA 90 bp | CATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGTaGACTGCCAAAACATTTGACTCCCAGGGAGATGTTCTGGCCTTA | + |
|
Preference number: 1 (lower is better) Translates to: HGLLHPDFNQETKRW*TAKTFDSQGDVLAL Trigger: TAAGGCCAGAACATCTCCCTGGGAGTCAAATGTTTTGGCAGTTCACCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR CAA 90 bp | CCGGTTGAGGAATGTGAACAGGGGAGGAGCCAGGGAGGCGACAGGTaGCCTGTCATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: PVEECEQGRSQGGDR*PVISHRASRGNPNV Trigger: AACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCCTGTTCACATTCCTCAACCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTTCCATGGCCTCCTCCTaGTCCATGGCCTCCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: ISHRASRGNPNVGSSALSSMASS*SMASST Trigger: GGTGGAGGAGGCCATGGATCAGGAGGAGGCCATGGA...AGAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR CAA 90 bp | CTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTaGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LRGPASRGGQGAWCS*GFFHVFNQIWESQR Trigger: CCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTGTTAAGGGAGGCCAGGGTGCATaGTGTTCCTTGGGGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: VRFPGEKIQEWGVLVTVKGGQGA*CSLGFF Trigger: GAAGAACCCCAAGGAACACCATGCACCCTGGCCTCC...CTTAACAGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR CCA 90 bp | AATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTGGAGGCCAGGGTGCATaGTGTTCCTTGGGGTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: NYVRFPGEKIQEWGVLVTGGQGA*CSLGFF Trigger: GAAGAACCCCAAGGAACACCATGCACCCTGGCCTCC...AGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGTCCATGGCCTCCTCCTaGTCCATGGCCTCCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: LFTVLNYVRFPGEKIQEWSMASS*SMASST Trigger: GGTGGAGGAGGCCATGGATCAGGAGGAGGCCATGGA...CCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR TCA 90 bp | CATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTTCCTGTTGAATGGCTaGGCATACTTCAAAGGCACC | + |
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Preference number: 2 (lower is better) Translates to: HFSQSQQGEPKCWLFRSFFLLNG*AYFKGT Trigger: GGTGCCTTTGAAGTATGCTCAGCCATTCAACAGGAA...GAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTGATCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGAATGGAGCTGGAAGATaGCAGTCTGAGAAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LLIHGLLHPDFNQETKRWNGAGR*QSEKRE Trigger: TTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATT...CCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGATCAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR CCA 90 bp | TACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTGTTTACTCCTCTCTAGAATaGAGCTGGAAGATGCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: YVRFPGEKIQEWGVLVTVYSSLE*SWKMPV Trigger: GACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTA...AACAGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGTGAACTGAATGGAGCTGGAAGATaGCAGTCTGAGAAGAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SMASSTQTLTRKQKDGELNGAGR*QSEKRE Trigger: TTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATT...CAGTTCACCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR TCA 90 bp | GCGTTCCTACCTTGGAGCAGGGGAGTAAAATATTTGACCCGGTTGAGGAATGTGCTGTTCTTAATTACGTaGGATTTCCTGGGGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: AFLPWSRGVKYLTRLRNVLFLIT*DFLGRR Trigger: TCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAG...CACATTCCTCAACCGGGTCAAATATTTTACTCCCCTGCTCCAAGGTAGGAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTAACTGTTAAGTGCAGTACTGGGGTAAAAACAGGATTCCTGTTGAATGGCTACTCCTCTCTAGAATaGAGCTGGAAGATGCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LVTVKCSTGVKTGFLLNGYSSLE*SWKMPV Trigger: GACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTA...GCCATTCAACAGGAATCCTGTTTTTACCCCAGTACTGCACTTAACAGTTACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGTGCATGGTGTTCCTTaGGGTTCTTCCATGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LFTVLNYVRFPGEKIQEWVHGVP*GSSMFS Trigger: TGAAAACATGGAAGAACCCCAAGGAACACCATGCAC...CCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGAATGGAGCTGGAAGATaGCAGTCTGAGAAGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: FLFTVLNYVRFPGEKIQENGAGR*QSEKRE Trigger: TTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATT...CTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR GCA 72 bp | GGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTaGATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: GTQRSSLERRPG*MVFLGVLPCFQ Trigger: TTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR CCA 72 bp | CTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATaGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAA | + |
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Preference number: 3 (lower is better) Translates to: LRGPASRGGQGA*CSLGFFHVFNQ Trigger: TTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR CCA 72 bp | CAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTaGGGTTCTTCCATGTTTTCAACCAAATATGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: QPREEARVHGVP*GSSMFSTKYGN Trigger: ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR TCA 72 bp | TACTCCTCTCTAGAATGGAGCTGGAAGATGCCAGTCTaGGAAGAGGGAAATCCAAAGGAACTCAGAGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: YSSLEWSWKMPV*EEGNPKELRGP Trigger: TGGACCTCTGAGTTCCTTTGGATTTCCCTCTTCTCAGACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| 3UTR CCA 72 bp | TGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATaGGAATCTCAGCGGTTTCGAGTGTCGCGTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: CSLGFFHVFNQI*ESQRFRVSRQG Trigger: ACCCTGACGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCCAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGGCTGTCCTCAGTTCCTaGGCATCAAATTGGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GEEPGRRQVACHFSQSQQAVLSS*ASNWAA Trigger: TGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGC...CTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| CDS-3UTR TCA 90 bp | CTCCCGTTACTCCTCTCTAGAATGGAGCTGGAAGATGCCAGTCTGAGAAGAGGGAACTCAAGAACGTCCTaGGGGTGCCCAGGGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LPLLLSRMELEDASLRRGNSRTS*GCPGSP Trigger: GGGGGACCCTGGGCACCCTCAGGACGTTCTTGAGTT...CCCTCTTCTCAGACTGGCATCTTCCAGCTCCATTCTAGAGAGGAGTAACGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR TCA 90 bp | AGGAGCCAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGGGGGCATTGGTCTCAGTCCTaGTATCTTCCTCAGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSQGGDRLPVISHRASRGHWSQS*YLPQPP Trigger: TGGAGGCTGAGGAAGATATCAGGACTGAGACCAATG...CCCCCTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| CDS-3UTR TCA 90 bp | CTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTAGGCTCAGTTTCCTaGAGGGCTTGGTGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LRGPASRGGQGAWCSLGFLGSVS*RAWWSL Trigger: CAAACTCCACCAAGCCCTTCAGGAAACTGAGCCTAA...GAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCACGGGCGCTGCTCGGGTaGCCAGGATTTCCAAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ERRPGCMVFLGVLPCFQPRALLG*PGFPRL Trigger: TAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCG...TGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR TCA 90 bp | CCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCACAAGACCCAGGGAGCTaGGGATCTCCTGAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PREEARVHGVPWGSSMFSQDPGS*GSPESE Trigger: CTCTGACTCAGGAGATCCTCAGCTCCCTGGGTCTTG...TGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | GTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGAGCTGGGCATCTCCATaGAAACAGTTCCGGATAGCA | + |
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Preference number: 4 (lower is better) Translates to: VQPREEARVHGVPWGSSMSWASP*KQFRIA Trigger: TGCTATCCGGAACTGTTTCCATGGAGATGCCCAGCT...CATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | CAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGGGGGAACCCAACCCGCGTCAGCACTTaGAAATTAGGCTCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: QGGDRLPVISHRASRGNPTRVST*KLGSVS Trigger: GGAAACTGAGCCTAATTTCCAAGTGCTGACGCGGGT...TGGGTTCCCCCTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCACAAGACCCAGGGAGCTaGGGATCTCCTGAGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ERRPGCMVFLGVLPCFQPQDPGS*GSPESE Trigger: CTCTGACTCAGGAGATCCTCAGCTCCCTGGGTCTTG...TGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTAGGCTCAGTTTCCTaGAGGGCTTGGTGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PASRGGQGAWCSLGFFHVLGSVS*RAWWSL Trigger: CAAACTCCACCAAGCCCTTCAGGAAACTGAGCCTAA...AACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR GCA 90 bp | GTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGGCTGTCTTTGCTCTCTaGTCCGATTGGTCAGTACAT | + |
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Preference number: 4 (lower is better) Translates to: VQPREEARVHGVPWGSSMAVFAL*SDWSVH Trigger: ATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGC...CATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR GCA 90 bp | AAGAGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGTCCAGCCTGCTGAAGTaGCCGGACATCTTGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KREIQRNSEVQPREEARVSSLLK*PDILFF Trigger: GAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGA...CACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCAGAGATGTTCCCAGTaGTCCACAGCTCGCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: KREIQRNSEVQPREEARVQRCSQ*STARRH Trigger: ATGTCTGCGAGCTGTGGACCACTGGGAACATCTCTG...CACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGGAGCCAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGTCCTCAGCCTCCACCTaGAAGTCATGCTTATATACT | + |
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Preference number: 4 (lower is better) Translates to: GEEPGRRQVACHFSQSQQSSAST*KSCLYT Trigger: AGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGA...CTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTACCCGCGTCAGCACTTaGAAATTAGGCTCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PASRGGQGAWCSLGFFHVTRVST*KLGSVS Trigger: GGAAACTGAGCCTAATTTCCAAGTGCTGACGCGGGT...AACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGAACTCAAGAACGTCCTaGGGGTGCCCAGGGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: RPGCMVFLGVLPCFQPNMNSRTS*GCPGSP Trigger: GGGGGACCCTGGGCACCCTCAGGACGTTCTTGAGTT...CATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTAACGACAATCCCCTCTaGCTACATCCTGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PASRGGQGAWCSLGFFHVNDNPL*LHPEEK Trigger: CTTCTCTTCAGGATGTAGTCAGAGGGGATTGTCGTT...AACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTGTTAAGTCTCACGGTCCCCCTTaGTCAGGGCCAGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRFPGEKIQEWGVLVTVKSHGPP*SGPEAG Trigger: ACCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGA...CTTAACAGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | CCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCACAGAGATGTTCCCAGTaGTCCACAGCTCGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: PREEARVHGVPWGSSMFSQRCSQ*STARRH Trigger: ATGTCTGCGAGCTGTGGACCACTGGGAACATCTCTG...TGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | AATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTTCTCACGGTCCCCCTTaGTCAGGGCCAGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NYVRFPGEKIQEWGVLVTSHGPP*SGPEAG Trigger: ACCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGA...AGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCATCCAGCCTGCTGAAGTaGCCGGACATCTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERRPGCMVFLGVLPCFQPSSLLK*PDILFF Trigger: GAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGA...TGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGGAGCCAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGTCAGTACATCCACAATaGTATCATAGTCCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEEPGRRQVACHFSQSQQSVHPQ*YHSPHL Trigger: AAGGTGTGGACTATGATACCATTGTGGATGTACTGA...CTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCTACCTTGGAGCAGGGGAGTAAAATATTTGACCCGGTTGAGGAATGTGAACGGGCGCTGCTCGGGTaGCCAGGATTTCCAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VPTLEQGSKIFDPVEECERALLG*PGFPRL Trigger: TAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCG...TTCACATTCCTCAACCGGGTCAAATATTTTACTCCCCTGCTCCAAGGTAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTCCTCAGCCTCCACCTaGAAGTCATGCTTATATACT | + |
|
Preference number: 4 (lower is better) Translates to: PASRGGQGAWCSLGFFHVSSAST*KSCLYT Trigger: AGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGA...AACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| 3UTR CAA 72 bp | CCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTaGGGGTTCTTCCATGTTTTCAACCAAATATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PASRGGQGAWCS*GFFHVFNQIWE Trigger: TTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGTCTCACGGTCCCCCTTaGTCAGGGCCAGAAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLPCFQPNMGISAVSSVASHGPP*SGPEAG Trigger: ACCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGA...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTGCTGTCCTCAGTTCCTaGGCATCAAATTGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISHRASRGNPNVGSSALSAVLSS*ASNWAA Trigger: TGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGC...AGAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATCGGGCGCTGCTCGGGTaGCCAGGATTTCCAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RVHGVPWGSSMFSTKYGNRALLG*PGFPRL Trigger: TAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCG...ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCATTGCCCTGCTGTACTaGATTCTCCAGCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HFSQSQQGEPKCWLFRSFIALLY*ILQPAE Trigger: TTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAAT...GAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGCAAGACCCAGGGAGCTaGGGATCTCCTGAGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPCFQPNMGISAVSSVAQDPGS*GSPESE Trigger: CTCTGACTCAGGAGATCCTCAGCTCCCTGGGTCTTG...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATTAGGCTCAGTTTCCTaGAGGGCTTGGTGGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EEARVHGVPWGSSMFSTKLGSVS*RAWWSL Trigger: CAAACTCCACCAAGCCCTTCAGGAAACTGAGCCTAA...TTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GCGTTCCTACCTTGGAGCAGGGGAGTAAAATATTTGACCCGGTTGAGGAATGTGCCAGAGAGCGCTGCCTaGAAGGACTTCAATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFLPWSRGVKYLTRLRNVPESAA*KDFNRS Trigger: GGATCTATTGAAGTCCTTGCAGGCAGCGCTCTCTGG...CACATTCCTCAACCGGGTCAAATATTTTACTCCCCTGCTCCAAGGTAGGAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTGCTGTCTTTGCTCTCTaGTCCGATTGGTCAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: ISHRASRGNPNVGSSALSAVFAL*SDWSVH Trigger: ATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGC...AGAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR GCA 90 bp | TCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGTGAACTGTCCAGCCTGCTGAAGTaGCCGGACATCTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SMASSTQTLTRKQKDGELSSLLK*PDILFF Trigger: GAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGA...CAGTTCACCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGCAGAGATGTTCCCAGTaGTCCACAGCTCGCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RPGCMVFLGVLPCFQPNMQRCSQ*STARRH Trigger: ATGTCTGCGAGCTGTGGACCACTGGGAACATCTCTG...CATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATTCAGTACATCCACAATaGTATCATAGTCCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: REIQRNSEVQPREEARVHSVHPQ*YHSPHL Trigger: AAGGTGTGGACTATGATACCATTGTGGATGTACTGA...ATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | TACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGGTGTGTTGGTAACTGTTATTGCCCTGCTGTACTaGATTCTCCAGCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YVRFPGEKIQEWGVLVTVIALLY*ILQPAE Trigger: TTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAAT...AACAGTTACCAACACACCCCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGCATTGGTCTCAGTCCTaGTATCTTCCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPGCMVFLGVLPCFQPNMHWSQS*YLPQPP Trigger: TGGAGGCTGAGGAAGATATCAGGACTGAGACCAATG...CATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATAAACGACAATCCCCTCTaGCTACATCCTGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGQGAWCSLGFFHVFNQINDNPL*LHPEEK Trigger: CTTCTCTTCAGGATGTAGTCAGAGGGGATTGTCGTT...TATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATAGAAATGAGCTGTCTTTaGTCTCTGCTCCGATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGQGAWCSLGFFHVFNQIEMSCL*SLLRLV Trigger: GACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTC...TATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | TCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGTGAACTGGCTCTCTGCTCCGATTaGTCAGTACATCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SMASSTQTLTRKQKDGELALCSD*SVHPQW Trigger: CCATTGTGGATGTACTGACCAATCGGAGCAGAGAGC...CAGTTCACCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGATTCCTGTTGAATGGCTGAGCATACTTCAAAGGCACCTCAACTCCATGGCTGTCCTCAGTTCCTaGGCATCAAATTGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRIPVEWLSILQRHLNSMAVLSS*ASNWAA Trigger: TGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGC...CATGGAGTTGAGGTGCCTTTGAAGTATGCTCAGCCATTCAACAGGAATCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTTTTTACTGTCCCAAATTTCTTCTTaGACTCAGCCCGAATGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QSQQGEPKCWLFRSFFLLSQISS*TQPECL Trigger: TAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGA...CAGTAAAAAGAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAATCCCAAATTTCTTCTTaGACTCAGCCCGAATGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RGGQGAWCSLGFFHVFNQSQISS*TQPECL Trigger: TAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGA...TTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGTCCAGAGAGCGCTGCCTaGAAGGACTTCAATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVFNQIWESQRFRVSRPESAA*KDFNRS Trigger: GGATCTATTGAAGTCCTTGCAGGCAGCGCTCTCTGG...ACGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGATCCATGGCCTCCTCCACCCAGACTTTAACCAGGAAACAAAAAGATGGTCCACCTGGAAGTCATaGTTATATACTGCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLIHGLLHPDFNQETKRWSTWKS*LYTARH Trigger: ATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGA...CCATCTTTTTGTTTCCTGGTTAAAGTCTGGGTGGAGGAGGCCATGGATCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGAGCTGGGCATCTCCATaGAAACAGTTCCGGATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPCFQPNMGISAVSSVASWASP*KQFRIA Trigger: TGCTATCCGGAACTGTTTCCATGGAGATGCCCAGCT...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGACCCGCGTCAGCACTTaGAAATTAGGCTCAGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPCFQPNMGISAVSSVATRVST*KLGSVS Trigger: GGAAACTGAGCCTAATTTCCAAGTGCTGACGCGGGT...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATCATTGGTCTCAGTCCTaGTATCTTCCTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVHGVPWGSSMFSTKYGNHWSQS*YLPQPP Trigger: TGGAGGCTGAGGAAGATATCAGGACTGAGACCAATG...ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGGCTGTCTTTGCTCTCTaGTCCGATTGGTCAGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPCFQPNMGISAVSSVAAVFAL*SDWSVH Trigger: ATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGC...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGCCAGAGAGCGCTGCCTaGAAGGACTTCAATAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LFTVLNYVRFPGEKIQEWPESAA*KDFNRS Trigger: GGATCTATTGAAGTCCTTGCAGGCAGCGCTCTCTGG...CCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATATTGCCCTGCTGTACTaGATTCTCCAGCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVHGVPWGSSMFSTKYGNIALLY*ILQPAE Trigger: TTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAAT...ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATAACGACAATCCCCTCTaGCTACATCCTGAAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVHGVPWGSSMFSTKYGNNDNPL*LHPEEK Trigger: CTTCTCTTCAGGATGTAGTCAGAGGGGATTGTCGTT...ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCTACCTTGGAGCAGGGGAGTAAAATATTTGACCCGGTTGAGGAATGTGAATCCACCTGGAAGTCATaGTTATATACTGCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VPTLEQGSKIFDPVEECESTWKS*LYTARH Trigger: ATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGA...TTCACATTCCTCAACCGGGTCAAATATTTTACTCCCCTGCTCCAAGGTAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGGCTCTCTGCTCCGATTaGTCAGTACATCCACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFTVLNYVRFPGEKIQEWALCSD*SVHPQW Trigger: CCATTGTGGATGTACTGACCAATCGGAGCAGAGAGC...CCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGGGAATTCCACCTGGAAGTCATaGTTATATACTGCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVHGVPWGSSMFSTKYGNSTWKS*LYTARH Trigger: ATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGA...ATTCCCATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGTTCCTCAGCCTCCACCTaGAAGTCATGCTTATATACT | + |
|
Preference number: 4 (lower is better) Translates to: FFHVFNQIWESQRFRVSRSSAST*KSCLYT Trigger: AGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGA...ACGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTCTTTCTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCGAAATGAGCTGTCTTTaGTCTCTGCTCCGATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLFLFTVLNYVRFPGEKIEMSCL*SLLRLV Trigger: GACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTC...GATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAGAAAGAGCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTAACTGTTAAGTGCAGTACTGGGGTAAAAACAGGATTCCTGTTGAATGGCTCCCAAATTTCTTCTTaGACTCAGCCCGAATGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVTVKCSTGVKTGFLLNGSQISS*TQPECL Trigger: TAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGA...GCCATTCAACAGGAATCCTGTTTTTACCCCAGTACTGCACTTAACAGTTACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCACGATTTTCTCCAGATaGCCAGAGAGCGCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGPASRGGQGAWCSLGFTIFSR*PESAAC Trigger: GCAGGCAGCGCTCTCTGGCAATCTGGAGAAAATCGT...GAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 90 bp | TCAGCCTCCACCTGGAAGTCATGCTTATATACTGCCAGGCATGCCTaGAGTCCGGGCGCTGCTCGGGTGGCCAGGATTTCCAAGGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: SASTWKSCLYTARHA*SPGAARVARISKAT Trigger: TGTAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAGGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 90 bp | CCTGATATCTTCCTCAGCCTCCACCTGGAAGTCATGCTTATATACTaGCAGGCATGCCTGCAGTCCGGGCGCTGCTCGGGTGGCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PDIFLSLHLEVMLIY*QACLQSGRCSGGQD Trigger: ATCCTGGCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGAAGATATCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGGGGGAACCCAACGATTTTCTCCAGATaGCCAGAGAGCGCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QGGDRLPVISHRASRGNPTIFSR*PESAAC Trigger: GCAGGCAGCGCTCTCTGGCAATCTGGAGAAAATCGT...TGGGTTCCCCCTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCACTCTCACGGTCCCCCTaGCTCAGGGCCAGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERRPGCMVFLGVLPCFQPLSRSP*LRARSR Trigger: CCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGAG...TGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | GTCCAGCCTCGAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGAAGGAGCAGGACCCATaGCCCTGCTGTACTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: VQPREEARVHGVPWGSSMKEQDP*PCCTGF Trigger: GAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTT...CATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTCGAGGCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 90 bp | GAAGTCATGCTTATATACTGCCAGGCATGCCTGCAGTCCGGGCGCTaGTCGGGTGGCCAGGATTTCCAAGGCTACATCCTCAGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: EVMLIYCQACLQSGR*SGGQDFQGYILSRT Trigger: GGTTCTGCTGAGGATGTAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGAGCCAGGGAGGCGACAGGTTGCCTGTCATTTCTCACAGAGCCAGCAGTGCTCTCTGCTCCGATaGGTCAGTACATCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GEEPGRRQVACHFSQSQQCSLLR*VSTSTM Trigger: CATTGTGGATGTACTGACCAATCGGAGCAGAGAGCA...CTGCTGGCTCTGTGAGAAATGACAGGCAACCTGTCGCCTCCCTGGCTCCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAATCCAAAGGAACTCAGAGGTCCAGCCTCGAGAGGAGGCCAGGGTGCATACGATTTTCTCCAGATaGCCAGAGAGCGCTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: REIQRNSEVQPREEARVHTIFSR*PESAAC Trigger: GCAGGCAGCGCTCTCTGGCAATCTGGAGAAAATCGT...ATGCACCCTGGCCTCCTCTCGAGGCTGGACCTCTGAGTTCCTTTGGATTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCAAGGAGCAGGACCCATaGCCCTGCTGTACTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HFSQSQQGEPKCWLFRSFKEQDP*PCCTGF Trigger: GAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTT...GAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS TCA 90 bp | TTCCGGATAGCATCCTCCAGTTCCTGGCCAGTGCATCTCCGGTACTaGTCAAACACTCGGATGAGGTGTTCAGGACTGCGTTGTGTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FRIASSSSWPVHLRY*SNTRMRCSGLRCVR Trigger: CCTTACACAACGCAGTCCTGAACACCTCATCCGAGTGTTTGATCAGTACCGGAGATGCACTGGCCAGGAACTGGAGGATGCTATCCGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CCA 90 bp | GAACCAGAGGTCTTCAAGGCTGTCCTCAGTTCCTGGGCATCAAATTaGGCTGCAGGCTGTAGGAGAGCCACCACGATTTTCTCCAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: EPEVFKAVLSSWASN*AAGCRRATTIFSRL Trigger: CAATCTGGAGAAAATCGTGGTGGCTCTCCTACAGCCTGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGCCTTGAAGACCTCTGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CCA 90 bp | AGGATACCATTGGTCTCAGTCCTGATATCTTCCTCAGCCTCCACCTaGAAGTCATGCTTATATACTGCCAGGCATGCCTGCAGTCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIPLVSVLISSSAST*KSCLYTARHACSPG Trigger: GCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGAAGATATCAGGACTGAGACCAATGGTATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCATGCTCTCTGCTCCGATaGGTCAGTACATCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ERRPGCMVFLGVLPCFQPCSLLR*VSTSTM Trigger: CATTGTGGATGTACTGACCAATCGGAGCAGAGAGCA...TGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCAGGAGTGGCTCTCACGGTCCCCCTaGCTCAGGGCCAGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFTVLNYVRFPGEKIQEWLSRSP*LRARSR Trigger: CCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGAG...CCACTCCTGGATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CCGCTCTTTCTTTTTACTGTTCTTAATTACGTGAGATTTCCTGGGGAGAAGATCCTCTCACGGTCCCCCTaGCTCAGGGCCAGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLFLFTVLNYVRFPGEKILSRSP*LRARSR Trigger: CCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGAGAG...GATCTTCTCCCCAGGAAATCTCACGTAATTAAGAACAGTAAAAAGAAAGAGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGAAGGAGCAGGACCCATaGCCCTGCTGTACTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RPGCMVFLGVLPCFQPNMKEQDP*PCCTGF Trigger: GAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTT...CATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTTTTTACTGAGGGCTTGGTGGAGTTaGTTAGCAAAGTACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSQQGEPKCWLFRSFFLLRAWWS*LAKYSA Trigger: AGCGCTGTACTTTGCTAACAAACTCCACCAAGCCCT...CAGTAAAAAGAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAAAGAAATGAGCTGTCTTaGCTCTCTGCTCCGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: EEARVHGVPWGSSMFSTKRNELS*LSAPIG Trigger: ACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTCT...TTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 90 bp | CAGGACCCATTGCCCTGCTGTACTGGATTCTCCAGCCTGCTGAAGTaGCCGGACATCTTGTTCTTCCAAGTTGTAATCAATAATTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QDPLPCCTGFSSLLK*PDILFFQVVINNSR Trigger: TCTGGAATTATTGATTACAACTTGGAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAATGGGTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | GAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATAGGGCTTGGTGGAGTTaGTTAGCAAAGTACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: EARVHGVPWGSSMFSTKYRAWWS*LAKYSA Trigger: AGCGCTGTACTTTGCTAACAAACTCCACCAAGCCCT...ATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | CATTTCTCACAGAGCCAGCAGGGGGAACCCAAATGTTGGCTCTTCCGCTCTTTCTTCCCAAATTTCTTCTaGAACTCAGCCCGAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFSQSQQGEPKCWLFRSFFPNFF*NSARML Trigger: AAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAA...GAAAGAGCGGAAGAGCCAACATTTGGGTTCCCCCTGCTGGCTCTGTGAGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGTGCTCTCTGCTCCGATaGGTCAGTACATCCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: VLPCFQPNMGISAVSSVACSLLR*VSTSTM Trigger: CATTGTGGATGTACTGACCAATCGGAGCAGAGAGCA...CGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAAATATGAGAAATGAGCTGTCTTaGCTCTCTGCTCCGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPGCMVFLGVLPCFQPNMRNELS*LSAPIG Trigger: ACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTCT...CATATTTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCTACCTTGGAGCAGGGGAGTAAAATATTTGACCCGGTTGAGGAATGTGAAAGGGCTTGGTGGAGTTaGTTAGCAAAGTACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPTLEQGSKIFDPVEECERAWWS*LAKYSA Trigger: AGCGCTGTACTTTGCTAACAAACTCCACCAAGCCCT...TTCACATTCCTCAACCGGGTCAAATATTTTACTCCCCTGCTCCAAGGTAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGGCCAGGGTGCATGGTGTTCCTTGGGGTTCTTCCATGTTTTCAACCAATTCCCAAATTTCTTCTaGAACTCAGCCCGAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGGQGAWCSLGFFHVFNQFPNFF*NSARML Trigger: AAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAA...TTGGTTGAAAACATGGAAGAACCCCAAGGAACACCATGCACCCTGGCCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS TCA 90 bp | ACTTCAATAGATCCTGTTTGGTGCGCTCTTGAAAGGCTCGAGAAATaGGCTGTCTTTGCTCTCTGCTCCGATTGGTCAGTACATCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TSIDPVWCALERLEK*AVFALCSDWSVHPQ Trigger: TTGTGGATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTCTCGAGCCTTTCAAGAGCGCACCAAACAGGATCTATTGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS TCA 90 bp | CTTCAGCTCTACACAGGGCCAGTAGTGCTGAACGACAATCCCCTCTaGCTACATCCTGAAGAGAAGAATAGAGAGACTTCCCAAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLYTGPVVLNDNPL*LHPEEKNRETSQIS Trigger: AGAAATTTGGGAAGTCTCTCTATTCTTCTCTTCAGGATGTAGTCAGAGGGGATTGTCGTTCAGCACTACTGGCCCTGTGTAGAGCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 90 bp | ATTGGTCAGTACATCCACAATGGTATCATAGTCCACACCTTGGCCTaGGATAGCCTTCAGCAGTCTTTGTACATCCTTGTCCACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IGQYIHNGIIVHTLA*DSLQQSLYILVHTE Trigger: TTCAGTGTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGACTATGATACCATTGTGGATGTACTGACCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS TCA 90 bp | CTACATCCTGAAGAGAAGAATAGAGAGACTTCCCAAATTTCTTCTTaGACTCAGCCCGAATGCTTAGAAGGTCACTCTCGCTTCGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHPEEKNRETSQISS*TQPECLEGHSRFGR Trigger: TCTCCCGAAGCGAGAGTGACCTTCTAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAAGTCTCTCTATTCTTCTCTTCAGGATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCCATGTTTTCAACCAAATATGGGAATCTCAGCGGTTTCGAGTGTCGCGTTTCCCAAATTTCTTCTaGAACTCAGCCCGAATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FFHVFNQIWESQRFRVSRFPNFF*NSARML Trigger: AAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAA...ACGCGACACTCGAAACCGCTGAGATTCCCATATTTGGTTGAAAACATGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CCA 72 bp | CTGCCAGGCATGCCTGCAGTCCGGGCGCTGCTCGGGTaGCCAGGATTTCCAAGGCTACATCCTCAGCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPGMPAVRALLG*PGFPRLHPQQN Trigger: GTTCTGCTGAGGATGTAGCCTTGGAAATCCTGGCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS TCA 72 bp | CCCAGGCTGCGGTCTTGTCGGCAAGACCCAGGGAGCTaGGGATCTCCTGAGTCAGAGATGTTCCCAGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRLRSCRQDPGS*GSPESEMFPVV Trigger: GACCACTGGGAACATCTCTGACTCAGGAGATCCTCAGCTCCCTGGGTCTTGCCGACAAGACCGCAGCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000123365.2 ENSMUST00000164406.8 |
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| CDS GCA 72 bp | CTCCACCTGGAAGTCATGCTTATATACTGCCAGGCATaGCTGCAGTCCGGGCGCTGCTCGGGTGGCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LHLEVMLIYCQA*LQSGRCSGGQD Trigger: ATCCTGGCCACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 72 bp | TTCCTCAGCCTCCACCTGGAAGTCATGCTTATATACTaGCAGGCATGCCTGCAGTCCGGGCGCTGCTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLSLHLEVMLIY*QACLQSGRCSG Trigger: ACCCGAGCAGCGCCCGGACTGCAGGCATGCCTGGCAGTATATAAGCATGACTTCCAGGTGGAGGCTGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CAA 90 bp | CGGTCCCCCTTGCTCAGGGCCAGAAGCAGGTCCTGCAGGATACCATaGGTCTCAGTCCTGATATCTTCCTCAGCCTCCACCTGGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSPLLRARSRSCRIP*VSVLISSSASTWKS Trigger: TGACTTCCAGGTGGAGGCTGAGGAAGATATCAGGACTGAGACCAATGGTATCCTGCAGGACCTGCTTCTGGCCCTGAGCAAGGGGGACCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CAA 90 bp | TCGGATGAGGTGTTCAGGACTGCGTTGTGTAAGGAGCAGGACCCATaGCCCTGCTGTACTGGATTCTCCAGCCTGCTGAAGTGCCCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SDEVFRTALCKEQDP*PCCTGFSSLLKCPD Trigger: GTCCGGGCACTTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTTACACAACGCAGTCCTGAACACCTCATCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 72 bp | AGGACTGCGTTGTGTAAGGAGCAGGACCCATTGCCCTaGTGTACTGGATTCTCCAGCCTGCTGAAGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTALCKEQDPLP*CTGFSSLLKCP Trigger: CGGGCACTTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTTACACAACGCAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS GCA 72 bp | TCACGGTCCCCCTTGCTCAGGGCCAGAAGCAGGTCCTaGAGGATACCATTGGTCTCAGTCCTGATATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSPLLRARSRS*RIPLVSVLISS Trigger: GGAAGATATCAGGACTGAGACCAATGGTATCCTGCAGGACCTGCTTCTGGCCCTGAGCAAGGGGGACCGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CCA 72 bp | GCAGAACCAGAGGTCTTCAAGGCTGTCCTCAGTTCCTaGGCATCAAATTGGGCTGCAGGCTGTAGGAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AEPEVFKAVLSS*ASNWAAGCRRA Trigger: GGCTCTCCTACAGCCTGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGCCTTGAAGACCTCTGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS TCA 72 bp | GCATCCTCCAGTTCCTGGCCAGTGCATCTCCGGTACTaGTCAAACACTCGGATGAGGTGTTCAGGACTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSWPVHLRY*SNTRMRCSGLR Trigger: ACGCAGTCCTGAACACCTCATCCGAGTGTTTGATCAGTACCGGAGATGCACTGGCCAGGAACTGGAGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CAA 90 bp | TCCACACCTTGGCCTGCGATAGCCTTCAGCAGTCTTTGTACATCCTaGTCCACACTGAAACTCAAGAACGTCCTGAGGGTGCCCAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: STPWPAIAFSSLCTS*STLKLKNVLRVPRV Trigger: GACCCTGGGCACCCTCAGGACGTTCTTGAGTTTCAGTGTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
||
| CDS CCA 72 bp | GTCTTCAAGGCTGTCCTCAGTTCCTGGGCATCAAATTaGGCTGCAGGCTGTAGGAGAGCCACCACGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: VFKAVLSSWASN*AAGCRRATTIF Trigger: GAAAATCGTGGTGGCTCTCCTACAGCCTGCAGCCCAATTTGATGCCCAGGAACTGAGGACAGCCTTGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 90 bp | TCTCCGGTACTGATCAAACACTCGGATGAGGTGTTCAGGACTGCGTaGTGTAAGGAGCAGGACCCATTGCCCTGCTGTACTGGATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPVLIKHSDEVFRTA*CKEQDPLPCCTGFS Trigger: GGAGAATCCAGTACAGCAGGGCAATGGGTCCTGCTCCTTACACAACGCAGTCCTGAACACCTCATCCGAGTGTTTGATCAGTACCGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 72 bp | CTGATCAAACACTCGGATGAGGTGTTCAGGACTGCGTaGTGTAAGGAGCAGGACCCATTGCCCTGCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: LIKHSDEVFRTA*CKEQDPLPCCT Trigger: AGTACAGCAGGGCAATGGGTCCTGCTCCTTACACAACGCAGTCCTGAACACCTCATCCGAGTGTTTGATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CCA 72 bp | TTTCTCAACATGGAAGCTAGGCTGATCAGAGCCAGCTaGGCATCTCCATGGAAACAGTTCCGGATAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: FLNMEARLIRAS*ASPWKQFRIAS Trigger: GGATGCTATCCGGAACTGTTTCCATGGAGATGCCCAGCTGGCTCTGATCAGCCTAGCTTCCATGTTGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 72 bp | TGGCCTGCGATAGCCTTCAGCAGTCTTTGTACATCCTaGTCCACACTGAAACTCAAGAACGTCCTGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WPAIAFSSLCTS*STLKLKNVLRV Trigger: CACCCTCAGGACGTTCTTGAGTTTCAGTGTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 90 bp | GGTATCATAGTCCACACCTTGGCCTGCGATAGCCTTCAGCAGTCTTaGTACATCCTTGTCCACACTGAAACTCAAGAACGTCCTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GIIVHTLACDSLQQS*YILVHTETQERPEG Trigger: ACCCTCAGGACGTTCTTGAGTTTCAGTGTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGACTATGATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 90 bp | GCTCCGATTGGTCAGTACATCCACAATGGTATCATAGTCCACACCTaGGCCTGCGATAGCCTTCAGCAGTCTTTGTACATCCTTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: APIGQYIHNGIIVHT*ACDSLQQSLYILVH Trigger: GTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGACTATGATACCATTGTGGATGTACTGACCAATCGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 72 bp | GTCCACACCTTGGCCTGCGATAGCCTTCAGCAGTCTTaGTACATCCTTGTCCACACTGAAACTCAAGAACGT | + |
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Preference number: 6 (lower is better) Translates to: VHTLACDSLQQS*YILVHTETQER Trigger: ACGTTCTTGAGTTTCAGTGTGGACAAGGATGTACAAAGACTGCTGAAGGCTATCGCAGGCCAAGGTGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 72 bp | GGTGCGCTCTTGAAAGGCTCGAGAAATGAGCTGTCTTaGCTCTCTGCTCCGATTGGTCAGTACATCCACAAT | + |
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Preference number: 6 (lower is better) Translates to: GALLKGSRNELS*LSAPIGQYIHN Trigger: ATTGTGGATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTCTCGAGCCTTTCAAGAGCGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS GCA 72 bp | TTGCCCTGCTGTACTGGATTCTCCAGCCTGCTGAAGTaGCCGGACATCTTGTTCTTCCAAGTTGTAATCAAT | + |
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Preference number: 6 (lower is better) Translates to: LPCCTGFSSLLK*PDILFFQVVIN Trigger: ATTGATTACAACTTGGAAGAACAAGATGTCCGGGCACTTCAGCAGGCTGGAGAATCCAGTACAGCAGGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS CAA 90 bp | ATCCTGTTTGGTGCGCTCTTGAAAGGCTCGAGAAATGAGCTGTCTTaGCTCTCTGCTCCGATTGGTCAGTACATCCACAATGGTATCATA | + |
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Preference number: 6 (lower is better) Translates to: ILFGALLKGSRNELS*LSAPIGQYIHNGII Trigger: TATGATACCATTGTGGATGTACTGACCAATCGGAGCAGAGAGCAAAGACAGCTCATTTCTCGAGCCTTTCAAGAGCGCACCAAACAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS TCA 72 bp | TGCAAGGACTTCAATAGATCCTGTTTGGTGCGCTCTTaGAAGGCTCGAGAAATGAGCTGTCTTTGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CKDFNRSCLVRS*KAREMSCLCSL Trigger: CAGAGAGCAAAGACAGCTCATTTCTCGAGCCTTTCAAGAGCGCACCAAACAGGATCTATTGAAGTCCTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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| CDS TCA 72 bp | GAAGAGAAGAATAGAGAGACTTCCCAAATTTCTTCTTaGACTCAGCCCGAATGCTTAGAAGGTCACTCTCGC | + |
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Preference number: 6 (lower is better) Translates to: EEKNRETSQISS*TQPECLEGHSR Trigger: GCGAGAGTGACCTTCTAAGCATTCGGGCTGAGTTCAAGAAGAAATTTGGGAAGTCTCTCTATTCTTCTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015846.9 ENSMUST00000107183.8 ENSMUST00000164406.8 |
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