Pregenerated sensors for ANXA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021950Ensembl transcript IDs: ENSMUST00000022519.15, ENSMUST00000120077.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGCTGGGCGGCTCCCTAGTCTGCAAGCTTCAGCATGGAGGGAATaGCTGGACAAGCCCGAGTTTCTCAGACCACAGCGTACTTGGGTC | + |
|
Preference number: 1 (lower is better) Translates to: RAGRLPSLQASAWRE*LDKPEFLRPQRTWV Trigger: GACCCAAGTACGCTGTGGTCTGAGAAACTCGGGCTTGTCCAGTCATTCCCTCCATGCTGAAGCTTGCAGACTAGGGAGCCGCCCAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CCA 90 bp | CTGGGCGGCTCCCTAGTCTGCAAGCTTCAGCATGGAGGGAATGACTaGACAAGCCCGAGTTTCTCAGACCACAGCGTACTTGGGTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LGGSLVCKLQHGGND*TSPSFSDHSVLGSG Trigger: TCCTGACCCAAGTACGCTGTGGTCTGAGAAACTCGGGCTTGTCCAGTCATTCCCTCCATGCTGAAGCTTGCAGACTAGGGAGCCGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR GCA 90 bp | TCATGTTCTTCAGGCTCGGAGACCACGATCAGAGGATGGGATTCATaGTCAGGGCTGGGCGGCTCCCTAGTCTGCAAGCTTCAGCATGGA | + |
|
Preference number: 1 (lower is better) Translates to: SCSSGSETTIRGWDS*SGLGGSLVCKLQHG Trigger: TCCATGCTGAAGCTTGCAGACTAGGGAGCCGCCCAGCCCTGAGCATGAATCCCATCCTCTGATCGTGGTCTCCGAGCCTGAAGAACATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR TCA 90 bp | AGAGGTAATGCTAGGGTGGGCGGTATACACATACCTAGAAATGACTaGCGGGAGAGGTGGAAGGGAAACCCAGGCTGGTCTCATCATCCG | + |
|
Preference number: 1 (lower is better) Translates to: RGNARVGGIHIPRND*RERWKGNPGWSHHP Trigger: CGGATGATGAGACCAGCCTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGCCCACCCTAGCATTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR TCA 90 bp | TCAGAGCCAAGGCATCTGTGTGCCCTGTGCCCAGGAGATTTTGTGTaGAGGGGAAGGAATGACCCACAGGACACTGCAAGCTTCTTTCTT | + |
|
Preference number: 1 (lower is better) Translates to: SEPRHLCALCPGDFV*RGRNDPQDTASFFL Trigger: AAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGGGCACAGGGCACACAGATGCCTTGGCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CCA 90 bp | GTGGAAGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATaGGATGAGAAGCATCAGAAACTGGGCAACAGAAGACTAAAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: VEGKPRLVSSSGSEA*DEKHQKLGNRRLKA Trigger: GGCTTTTAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR TCA 90 bp | AGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATGGGATaGGAAGCATCAGAAACTGGGCAACAGAAGACTAAAAGCCAGATG | + |
|
Preference number: 1 (lower is better) Translates to: RETQAGLIIRVRSMG*EASETGQQKTKSQM Trigger: CATCTGGCTTTTAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCACCCATGGTCGGGGCTaGAGCTGCAGGGGCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: WAVYTYLEMTDGRGGRETTHGRG*SCRGWA Trigger: AGCCCAGCCCCTGCAGCTTCAGCCCCGACCATGGGT...GGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR-3UTR TCA 90 bp | GGAATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTTCCGTTTACCCATGGTCGGGGCTaGAGCTGCAGGGGCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GMTHRTLQASFFMLMFPFTHGRG*SCRGWA Trigger: AGCCCAGCCCCTGCAGCTTCAGCCCCGACCATGGGT...AAACGGAAACATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCAGAGCTATGTGACCCTTTCTCAGATCCACGGCCGTGTCCTCTCATAGAGAAGGGAAACCCAGGCTaGTCTCATCATCCGGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LAELCDPFSDPRPCPLIEKGNPG*SHHPGQ Trigger: CTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTT...CTCTATGAGAGGACACGGCCGTGGATCTGAGAAAGGGTCACATAGCTCTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCTCTCATAGAGGTGCTCTCCCACATGCTCACTGGCTGCCTGATAATGATGGTCAGAAGCATGGGATaGGAAGCATCAGAAACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: CPLIEVLSHMLTGCLIMMVRSMG*EASETG Trigger: CCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGAC...CATCATTATCAGGCAGCCAGTGAGCATGTGGGAGAGCACCTCTATGAGAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR-3UTR CCA 90 bp | GCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCCAGTCCGGGTCAGAAGCATaGGATGAGAAGCATCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: AVYTYLEMTDGRGGRETQSGSEA*DEKHQK Trigger: TTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA...CTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCAGCTAAGACAACTGCTAGAAATCCATGTTCCTTGGTTCTTCCTCTGAAGCCAGGAGATTTTGTGTaGAGGGGAAGGAATGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LAAKTTARNPCSLVLPLKPGDFV*RGRNDP Trigger: TGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGG...CTTCAGAGGAAGAACCAAGGAACATGGATTTCTAGCAGTTGTCTTAGCTGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR-3UTR CCA 90 bp | TTAGCAGCTAAGACAACTGCTAGAAATCCATGTTCCTTGGTTCTTCCTCTGAAGTCCGGGTCAGAAGCATaGGATGAGAAGCATCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LAAKTTARNPCSLVLPLKSGSEA*DEKHQK Trigger: TTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA...CTTCAGAGGAAGAACCAAGGAACATGGATTTCTAGCAGTTGTCTTAGCTGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR GCA 72 bp | TCAGGCTCGGAGACCACGATCAGAGGATGGGATTCATaGTCAGGGCTGGGCGGCTCCCTAGTCTGCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SGSETTIRGWDS*SGLGGSLVCKL Trigger: AAGCTTGCAGACTAGGGAGCCGCCCAGCCCTGAGCATGAATCCCATCCTCTGATCGTGGTCTCCGAGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CCA 72 bp | TCATGTTCTTCAGGCTCGGAGACCACGATCAGAGGATaGGATTCATGCTCAGGGCTGGGCGGCTCCCTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SCSSGSETTIRG*DSCSGLGGSLV Trigger: GACTAGGGAGCCGCCCAGCCCTGAGCATGAATCCCATCCTCTGATCGTGGTCTCCGAGCCTGAAGAACATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR TCA 72 bp | CGGCTCCCTAGTCTGCAAGCTTCAGCATGGAGGGAATaGCTGGACAAGCCCGAGTTTCTCAGACCACAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: RLPSLQASAWRE*LDKPEFLRPQR Trigger: ACGCTGTGGTCTGAGAAACTCGGGCTTGTCCAGTCATTCCCTCCATGCTGAAGCTTGCAGACTAGGGAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR TCA 72 bp | GCTAGGGTGGGCGGTATACACATACCTAGAAATGACTaGCGGGAGAGGTGGAAGGGAAACCCAGGCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARVGGIHIPRND*RERWKGNPGWS Trigger: AGACCAGCCTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGCCCACCCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR TCA 72 bp | AGGCATCTGTGTGCCCTGTGCCCAGGAGATTTTGTGTaGAGGGGAAGGAATGACCCACAGGACACTGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RHLCALCPGDFV*RGRNDPQDTAS Trigger: GCTTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGGGCACAGGGCACACAGATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCCTTTCTCAGATCCACGGCCGTGTCCTCTCATAGAGGTGCTCTCCCACTGTGCCCAGGAGATTTaGTGTGAAGGGGAAGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: CDPFSDPRPCPLIEVLSHCAQEI*CEGEGM Trigger: CATTCCTTCCCCTTCACACAAAATCTCCTGGGCACA...GTGGGAGAGCACCTCTATGAGAGGACACGGCCGTGGATCTGAGAAAGGGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CCA 72 bp | TCCCTAGTCTGCAAGCTTCAGCATGGAGGGAATGACTaGACAAGCCCGAGTTTCTCAGACCACAGCGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: SLVCKLQHGGND*TSPSFSDHSVL Trigger: AAGTACGCTGTGGTCTGAGAAACTCGGGCTTGTCCAGTCATTCCCTCCATGCTGAAGCTTGCAGACTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CCA 72 bp | AAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATaGGATGAGAAGCATCAGAAACTGGGCAACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPRLVSSSGSEA*DEKHQKLGNRR Trigger: TCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR TCA 72 bp | CAGGCTGGTCTCATCATCCGGGTCAGAAGCATGGGATaGGAAGCATCAGAAACTGGGCAACAGAAGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QAGLIIRVRSMG*EASETGQQKTK Trigger: TTTAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGAGACCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| 3UTR TCA 72 bp | CCTGTGCCCAGGAGATTTTGTGTGAAGGGGAAGGAATaGCCCACAGGACACTGCAAGCTTCTTTCTTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: PVPRRFCVKGKE*PTGHCKLLSSC Trigger: ACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGGGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGGAAGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATGGTGCATTTCACCACAGTaGGCATGGCCTCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GEVEGKPRLVSSSGSEAWCISPQ*AWPPPA Trigger: CGCTGGAGGAGGCCATGCTCACTGTGGTGAAATGCA...CCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTTCCACCTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGTGGAAGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATGGTCCATCACGTGTCCCTaGTCCCTTCATGGCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEVEGKPRLVSSSGSEAWSITCP*SLHGVV Trigger: TACTACGCCATGAAGGGAGCAGGGACACGTGATGGA...CCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTTCCACCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGTGGAAGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCATGGTTCCTAAGCCCTTCATaGCATCGTGCAGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEVEGKPRLVSSSGSEAWFLSPS*HRAAPW Trigger: CCAAGGAGCTGCACGATGCCATGAAGGGCTTAGGAA...CCATGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTTCCACCTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCTGCATTTCACCACAGTaGGCATGGCCTCCTCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: WAVYTYLEMTDGRGGRETCISPQ*AWPPPA Trigger: CGCTGGAGGAGGCCATGCTCACTGTGGTGAAATGCA...GGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCAGAGCTATGTGACCCTTTCTCAGATCCACGGCCGTGTCCTCTCATAGAGTTCTCACCCGCTTCATaGAGGGCCTGTGCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAELCDPFSDPRPCPLIEFSPAS*RACASW Trigger: CCAAGATGCACAGGCCCTGCATGAAGCGGGTGAGAA...CTCTATGAGAGGACACGGCCGTGGATCTGAGAAAGGGTCACATAGCTCTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR GCA 90 bp | GCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCCAGCGCTCACATCATCTCTaGTGCCCTGCAGGAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: AVYTYLEMTDGRGGRETQRSHHL*CPAGDT Trigger: TGTGTCTCCTGCAGGGCAGCAGAGATGATGTGAGCG...CTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | GCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCCAGGCAATCTGCTGCCTCTaGACATTGCTCCTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVYTYLEMTDGRGGRETQAICCL*TLLLLV Trigger: CACCAAGAGGAGCAATGTGCAGAGGCAGCAGATTGC...CTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCCAGGAGATTTTGTGTGAAGGGGAAGGAATGACCCACAGGACACTGCAATCCATCACGTGTCCCTaGTCCCTTCATGGCGTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CAQEILCEGEGMTHRTLQSITCP*SLHGVV Trigger: TACTACGCCATGAAGGGAGCAGGGACACGTGATGGA...TTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR CCA 90 bp | TCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAAGACTACTCTCATCAGGTGAGTaGCACTGCGTGTGCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSEAWDEKHQKLGNRRLLSSGE*HCVCTG Trigger: TCCTGTGCACACGCAGTGCCACTCACCTGATGAGAG...TAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR GCA 90 bp | TCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAAGACTAGCAATCTGCTGCCTCTaGACATTGCTCCTCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSEAWDEKHQKLGNRRLAICCL*TLLLLV Trigger: CACCAAGAGGAGCAATGTGCAGAGGCAGCAGATTGC...TAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | TCATCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAAGATCATCTCTGCTGCCCTaGAGGAGACACACCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSGSEAWDEKHQKLGNRRSSLLP*RRHTRI Trigger: GATTCTGGTGTGTCTCCTGCAGGGCAGCAGAGATGA...TCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR TCA 90 bp | GCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCCAGCATCAGGGTCTGGGTTaGAATGAGAACTACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVYTYLEMTDGRGGRETQHQGLG*NENYPS Trigger: TGAAGGGTAGTTCTCATTTCAACCCAGACCCTGATG...CTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAGGAGATTTTGTGTGAAGGGGAAGGAATGACCCACAGGACACTGCAAAGGTCCTTTCCAAATTaGGCCTTGAAGGACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CAQEILCEGEGMTHRTLQRSFPN*ALKDLA Trigger: TGCCAAGTCCTTCAAGGCTCAATTTGGAAAGGACCT...TTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTCACACAAAATCTCCTGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR CCA 90 bp | GAAGGGGAAGGAATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTCCTAAGCCCTTCATaGCATCGTGCAGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGEGMTHRTLQASFFMLMFLSPS*HRAAPW Trigger: CCAAGGAGCTGCACGATGCCATGAAGGGCTTAGGAA...CATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATTCCTTCCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR GCA 90 bp | AATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTTCCGTTTGCCGCTCACATCATCTCTaGTGCCCTGCAGGAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: NDPQDTASFFLHVDVSVCRSHHL*CPAGDT Trigger: TGTGTCTCCTGCAGGGCAGCAGAGATGATGTGAGCG...GCAAACGGAAACATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR TCA 90 bp | TCATCATCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGATTCCAAATTGAGCCTTaGAGGACTTGGCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSGSEAWDEKHQKLGNRFQIEP*RTWQSA Trigger: AGCAGATTGCCAAGTCCTTCAAGGCTCAATTTGGAA...TCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR TCA 90 bp | AATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTTCCGTTTGCCATCAGGGTCTGGGTTaGAATGAGAACTACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NDPQDTASFFLHVDVSVCHQGLG*NENYPS Trigger: TGAAGGGTAGTTCTCATTTCAACCCAGACCCTGATG...GCAAACGGAAACATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR GCA 90 bp | GCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCCAGATAGTCTTCCTCATATaGCTTCATTATCTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVYTYLEMTDGRGGRETQIVFLI*LHYLSQ Trigger: CTGAGAGAGATAATGAAGGCATATGAGGAAGACTAT...CTGGGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCGGTATACACATACCTAGAAATGACTGACGGGAGAGGTGGAAGGGAAACCAGTCAATCTCACTCCTaGAAACAATGTTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: WAVYTYLEMTDGRGGRETSQSHS*KQCSLS Trigger: TGATAAGGAACATTGTTTCCAGGAGTGAGATTGACT...GGTTTCCCTTCCACCTCTCCCGTCAGTCATTTCTAGGTATGTGTATACCGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR GCA 90 bp | TCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAAGACTAATAGTCTTCCTCATATaGCTTCATTATCTCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSEAWDEKHQKLGNRRLIVFLI*LHYLSQ Trigger: CTGAGAGAGATAATGAAGGCATATGAGGAAGACTAT...TAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR TCA 90 bp | TATGATTCTGAAAGCCCAACGAATATTGAGAAGAGTTCTGTCATGTTCTTCAGGTTCCAAATTGAGCCTTaGAGGACTTGGCAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YDSESPTNIEKSSVMFFRFQIEP*RTWQSA Trigger: AGCAGATTGCCAAGTCCTTCAAGGCTCAATTTGGAA...CCTGAAGAACATGACAGAACTCTTCTCAATATTCGTTGGGCTTTCAGAATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR CCA 90 bp | GGAATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTTCCGTTTAGTCAATCTCACTCCTaGAAACAATGTTCCTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: GMTHRTLQASFFMLMFPFSQSHS*KQCSLS Trigger: TGATAAGGAACATTGTTTCCAGGAGTGAGATTGACT...AAACGGAAACATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| 3UTR CAA 72 bp | GTACAAATGTTTATGATTCTGAAAGCCCAACGAATATaGAGAAGAGTTCTGTCATGTTCTTCAGGCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VQMFMILKAQRI*RRVLSCSSGSE Trigger: CTCCGAGCCTGAAGAACATGACAGAACTCTTCTCAATATTCGTTGGGCTTTCAGAATCATAAACATTTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR CAA 90 bp | ACGGGAGAGGTGGAAGGGAAACCCAGGCTGGTCTCATCATCCGGGTCAGAAGCACAGGGCCTGTGCATCTaGGAGGACCAGTCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: TGEVEGKPRLVSSSGSEAQGLCI*EDQSWI Trigger: GATCCAGGACTGGTCCTCCAAGATGCACAGGCCCTG...TGCTTCTGACCCGGATGATGAGACCAGCCTGGGTTTCCCTTCCACCTCTCCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR CAA 90 bp | TCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAAGACTAATGATGGCCTGCTCATaGGTTCCAATCCCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: SGSEAWDEKHQKLGNRRLMMACS*VPIPFM Trigger: CATGAAGGGGATTGGAACCAATGAGCAGGCCATCAT...TAGTCTTCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR CAA 90 bp | AATGACCCACAGGACACTGCAAGCTTCTTTCTTCATGTTGATGTTTCCGTTTGCATGATGGCCTGCTCATaGGTTCCAATCCCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: NDPQDTASFFLHVDVSVCMMACS*VPIPFM Trigger: CATGAAGGGGATTGGAACCAATGAGCAGGCCATCAT...GCAAACGGAAACATCAACATGAAGAAAGAAGCTTGCAGTGTCCTGTGGGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS-3UTR CAA 90 bp | TCATCATCCGGGTCAGAAGCATGGGATGAGAAGCATCAGAAACTGGGCAACAGAATGAGTCTCTCAAATTaGCCACTCAGCTCTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSGSEAWDEKHQKLGNRMSLSN*PLSSDF Trigger: AAAGTCAGAGCTGAGTGGCAAATTTGAGAGACTCAT...TCTGTTGCCCAGTTTCTGATGCTTCTCATCCCATGCTTCTGACCCGGATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCAGCTAAGACAACTGCTAGAAATCCATGTTCCTTGGTTCTTCCTCTGAAGATGAGTCTCTCAAATTaGCCACTCAGCTCTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAAKTTARNPCSLVLPLKMSLSN*PLSSDF Trigger: AAAGTCAGAGCTGAGTGGCAAATTTGAGAGACTCAT...CTTCAGAGGAAGAACCAAGGAACATGGATTTCTAGCAGTTGTCTTAGCTGCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS GCA 72 bp | TCCCATAATCTTCTCACCCGCTTCATGCAGGGCCTGTaGATCTTGGAGGACCAGTCCTGGATCCACAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHNLLTRFMQGL*ILEDQSWIHKA Trigger: GGCTTTGTGGATCCAGGACTGGTCCTCCAAGATGCACAGGCCCTGCATGAAGCGGGTGAGAAGATTATGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022519.15 |
||
| CDS GCA 72 bp | TTCATATTCCTCGAACACCGCTTCATGCAGGGCCTGTaGATCTTGGAGGACCAGTCCTGGATCCACAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FIFLEHRFMQGL*ILEDQSWIHKA Trigger: GGCTTTGTGGATCCAGGACTGGTCCTCCAAGATGCACAGGCCCTGCATGAAGCGGTGTTCGAGGAATATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120077.2 |
||
| CDS CAA 72 bp | GACTTGGCAATCTGCTGCCTCTGCACATTGCTCCTCTaGGTGAGCACGTCTATGATGGCCTGCTCATTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: DLAICCLCTLLL*VSTSMMACSLV Trigger: AACCAATGAGCAGGCCATCATAGACGTGCTCACCAAGAGGAGCAATGTGCAGAGGCAGCAGATTGCCAAGTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022519.15 ENSMUST00000120077.2 |
||