Pregenerated sensors for ANXA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029994Ensembl transcript IDs: ENSMUST00000001187.15, ENSMUST00000113675.8, ENSMUST00000123732.4, ENSMUST00000127152.9, ENSMUST00000155456.8, ENSMUST00000204398.2, ENSMUST00000204441.3
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGGCCACAGGGACAAATGTCAGGACAGCCGTCAGTGTGCTGAGTaGCAGGGCAGCAGCTCTCTTTTGAAAGTCACATGGTGTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: LGHRDKCQDSRQCAE*QGSSSLLKVTWCSQ Trigger: CTGTGAACACCATGTGACTTTCAAAAGAGAGCTGCTGCCCTGGCACTCAGCACACTGACGGCTGTCCTGACATTTGTCCCTGTGGCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR GCA 90 bp | CATCAAACACGTGGAGCAGATGGTTCCGGTTCCGGGAACAGAGAATaGTTAGGAATTTCACCTCGTCTGTCCCCCATCTCTTCTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: HQTRGADGSGSGNRE*LGISPRLSPISSLQ Trigger: CTGGAGAGAAGAGATGGGGGACAGACGAGGTGAAATTCCTAAGCATTCTCTGTTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CCA 90 bp | AAGGTTGGTATCAGGATTCAATGGTGGCCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTCTTCTTCCAGAGGTCCTGAGTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: KVGIRIQWWPGEMAQ*LRALTLLPEVLSSI Trigger: AATTGAACTCAGGACCTCTGGAAGAAGAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGGCCACCATTGAATCCTGATACCAACCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR TCA 90 bp | TTCATACACTTCCCGGGAAGAAAATGGTCTCAGGGTAGAAGGAGATaGAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATA | + |
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Preference number: 1 (lower is better) Translates to: FIHFPGRKWSQGRRR*SKPHHIQQLSTTMI Trigger: TATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCTGAGACCATTTTCTTCCCGGGAAGTGTATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR TCA 90 bp | GCTTCCAGATGTCTCAGACTTAATGCTCTGTTCAATGTCCTTCTGTaGGATTCTTTTGTATTCATCAAACACGTGGAGCAGATGGTTCCG | + |
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Preference number: 1 (lower is better) Translates to: ASRCLRLNALFNVLL*DSFVFIKHVEQMVP Trigger: CGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATCTCACAGAAGGACATTGAACAGAGCATTAAGTCTGAGACATCTGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CAA 90 bp | GAGCAGAGGCAGCTCCTTCCCTCTGTGACATTCAGCGCTGAGCACTaGCATAGCGTGGGGCACGTCCTGGGTTCCGTTCCTTGGCCACAC | + |
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Preference number: 2 (lower is better) Translates to: EQRQLLPSVTFSAEH*HSVGHVLGSVPWPH Trigger: GTGTGGCCAAGGAACGGAACCCAGGACGTGCCCCACGCTATGCAAGTGCTCAGCGCTGAATGTCACAGAGGGAAGGAGCTGCCTCTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAGAAGGAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGACAGCCGTCAGTGTGCTaGGTGCCAGGGCAGCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: RVEGDEASPTIFSNCQLRQPSVC*VPGQQL Trigger: GAGCTGCTGCCCTGGCACTCAGCACACTGACGGCTG...TCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGTCCTGCGGCGTCTTGTGTTAATCATCTCCTCCACAGAGAACGAGCAGAGCTCCTTCCCTCTGTaGCATTCAGCGCTGAGCACT | + |
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Preference number: 2 (lower is better) Translates to: PSVLRRLVLIISSTENEQSSFPL*HSALST Trigger: AGTGCTCAGCGCTGAATGTCACAGAGGGAAGGAGCT...CTGCTCGTTCTCTGTGGAGGAGATGATTAACACAAGACGCCGCAGGACAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CAA 90 bp | CAGGACAGCCGTCAGTGTGCTGAGTGCCAGGGCAGCAGCTCTCTTTaGAAAGTCACATGGTGTTCACAGGTCCCACCTCATGTTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: QDSRQCAECQGSSSL*KVTWCSQVPPHVLF Trigger: AAAGAGAACATGAGGTGGGACCTGTGAACACCATGTGACTTTCAAAAGAGAGCTGCTGCCCTGGCACTCAGCACACTGACGGCTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | CGGTTCCGGGAACAGAGAATGCTTAGGAATTTCACCTCGTCTGTCCCCCATCTCGCTGACAGTCCCACGTaGAGAAATGACTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RFREQRMLRNFTSSVPHLADSPT*RNDWLP Trigger: AGGAAGCCAGTCATTTCTTCACGTGGGACTGTCAGC...GAGATGGGGGACAGACGAGGTGAAATTCCTAAGCATTCTCTGTTCCCGGAACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGTCCTGCGGCGTCTTGTGTTAATCATCTCCTCCACAGAGAACGAGCAGGCAGAAAAACTCTTCTaGGGTCAGCCACACCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PSVLRRLVLIISSTENEQAEKLF*GQPHPE Trigger: CTCTGGGTGTGGCTGACCTCAGAAGAGTTTTTCTGC...CTGCTCGTTCTCTGTGGAGGAGATGATTAACACAAGACGCCGCAGGACAGAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | TACTTGGCCACAGGGACAAATGTCAGGACAGCCGTCAGTGTGCTGAGTGCCAGGGCAGCAGCTCTCTTTTaGAAGTCACATGGTGTTCAC | + |
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Preference number: 2 (lower is better) Translates to: YLATGTNVRTAVSVLSARAAALF*KSHGVH Trigger: GTGAACACCATGTGACTTTCAAAAGAGAGCTGCTGC...CCTGGCACTCAGCACACTGACGGCTGTCCTGACATTTGTCCCTGTGGCCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGTCCTGCGGCGTCTTGTGTTAATCATCTCCTCCACAGAGAACGAGCAGCTCTTTAGGGAAGTATaGAGAGCAGAGGCAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSVLRRLVLIISSTENEQLFREV*RAEAAP Trigger: AGGAGCTGCCTCTGCTCTTCATACTTCCCTAAAGAG...CTGCTCGTTCTCTGTGGAGGAGATGATTAACACAAGACGCCGCAGGACAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | CGGTTCCGGGAACAGAGAATGCTTAGGAATTTCACCTCGTCTGTCCCCCATCTCGGTATCAGGATTCAATaGTGGCCTGGAGAGATGGCT | + |
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Preference number: 2 (lower is better) Translates to: RFREQRMLRNFTSSVPHLGIRIQ*WPGEMA Trigger: AGCCATCTCTCCAGGCCACCATTGAATCCTGATACC...GAGATGGGGGACAGACGAGGTGAAATTCCTAAGCATTCTCTGTTCCCGGAACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGTAGAAGGAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGAGCTGACAGTCCCACGTaGAGAAATGACTGGCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVEGDEASPTIFSNCQLRADSPT*RNDWLP Trigger: AGGAAGCCAGTCATTTCTTCACGTGGGACTGTCAGC...TCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCACTAGGTGGGCATGCTaGGCTTTACAAAAGGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: YDDRQSQRKGACENFGSVTRWAC*ALQKAQ Trigger: CTGGGCCTTTTGTAAAGCCCAGCATGCCCACCTAGT...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | CTCCGCATGCACTTCACTATAGCCAACAGGGCATCTTCAAAGCTTCCAGATGTCGATTCAATGGTGGCCTaGAGAGATGGCTCAGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: LRMHFTIANRASSKLPDVDSMVA*RDGSVV Trigger: AACCACTGAGCCATCTCTCCAGGCCACCATTGAATC...GACATCTGGAAGCTTTGAAGATGCCCTGTTGGCTATAGTGAAGTGCATGCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CAA 90 bp | CGAGGAACGACCGAGCACACGGGATCTGCTGAGCCACACTTGAGATaGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCC | + |
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Preference number: 2 (lower is better) Translates to: RGTTEHTGSAEPHLR*NLFDELVTLFHTLP Trigger: GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTGTGGCTCAGCAGATCCCGTGTGCTCGGTCGTTCCTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATAGGCAGAAGACTAGGTGGGCATaGTGGGCTTTACAAAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: EMKQAPPYSATVNYDDRQKTRWA*WALQKA Trigger: GGCCTTTTGTAAAGCCCAGCATGCCCACCTAGTCTT...CTGCCTATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CAA 90 bp | TCAGCACGAGGAACGACCGAGCACACGGGATCTGCTGAGCCACACTaGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACA | + |
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Preference number: 2 (lower is better) Translates to: SARGTTEHTGSAEPH*RLNLFDELVTLFHT Trigger: TGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTGTGGCTCAGCAGATCCCGTGTGCTCGGTCGTTCCTCGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | GATTCTTTTGTATTCATCAAACACGTGGAGCAGATGGTTCCGGTTCCGGGAACAATCAGGATTCAATGGTaGCCTGGAGAGATGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DSFVFIKHVEQMVPVPGTIRIQW*PGEMAQ Trigger: CTGAGCCATCTCTCCAGGCCACCATTGAATCCTGAT...TGTTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCGATAATAACATAGTCTaGATCCCAGGAGGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: YDDRQSQRKGACENFGSVDNNIV*IPGGNW Trigger: CCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | GAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATAGGCAGGATAATAACATAGTCTaGATCCCAGGAGGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: EMKQAPPYSATVNYDDRQDNNIV*IPGGNW Trigger: CCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC...CTGCCTATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGTAGAAGGAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGAGATAATAACATAGTCTaGATCCCAGGAGGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: RVEGDEASPTIFSNCQLRDNNIV*IPGGNW Trigger: CCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC...TCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCCGTCAGTGTGCTGAGTaGCAGGGCAGCAGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: HLRLNLFDELVTLFHTLPRQCAE*QGSSSL Trigger: AAGAGAGCTGCTGCCCTGGCACTCAGCACACTGACG...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCATCCCAGGAGGCAACTaGAGGCGTTTTAATTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: YDDRQSQRKGACENFGSVIPGGN*RRFNWK Trigger: TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGAT...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | GAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATAGGCAGATCCCAGGAGGCAACTaGAGGCGTTTTAATTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: EMKQAPPYSATVNYDDRQIPGGN*RRFNWK Trigger: TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGAT...CTGCCTATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCCGCATGCACTTCACTATAGCCAACAGGGCATCTTCAAAGCTTCCAGATGTCTTTTGAAAGTCACATaGTGTTCACAGGTCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: TPHALHYSQQGIFKASRCLLKVT*CSQVPP Trigger: AGGTGGGACCTGTGAACACCATGTGACTTTCAAAAG...ACATCTGGAAGCTTTGAAGATGCCCTGTTGGCTATAGTGAAGTGCATGCGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | GATTCTTTTGTATTCATCAAACACGTGGAGCAGATGGTTCCGGTTCCGGGAACACTAAGAAAGACTAGGTaGGCATGCTGGGCTTTACAA | + |
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Preference number: 2 (lower is better) Translates to: DSFVFIKHVEQMVPVPGTLRKTR*ACWALQ Trigger: TTGTAAAGCCCAGCATGCCCACCTAGTCTTTCTTAG...TGTTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CAA 90 bp | GTCTCAGACTTAATGCTCTGTTCAATGTCCTTCTGTGAGATTCTTTaGTATTCATCAAACACGTGGAGCAGATGGTTCCGGTTCCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: VSDLMLCSMSFCEIL*YSSNTWSRWFRFRE Trigger: TTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATCTCACAGAAGGACATTGAACAGAGCATTAAGTCTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAGCTGACAGTCCCACGTaGAGAAATGACTGGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: STSTKHKRGNNLIKTWSTADSPT*RNDWLP Trigger: AGGAAGCCAGTCATTTCTTCACGTGGGACTGTCAGC...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR TCA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCTTCTTCCAGAGGTCCTaGGTTCAATTCCCAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: HLRLNLFDELVTLFHTLPFFQRS*VQFPET Trigger: GGTTTCTGGGAATTGAACTCAGGACCTCTGGAAGAA...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR GCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACACCACACCCAGAGCATTaGATTATCAGAGCAACCTTG | + |
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Preference number: 2 (lower is better) Translates to: STSTKHKRGNNLIKTWSTPHPEH*IIRATL Trigger: CAAGGTTGCTCTGATAATGCAATGCTCTGGGTGTGG...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR-3UTR CCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAATTAAAAAGGCACAGTaGGGATCAAATAAACAGTCT | + |
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Preference number: 2 (lower is better) Translates to: STSTKHKRGNNLIKTWSTIKKAQ*GSNKQS Trigger: AGACTGTTTATTTGATCCCCACTGTGCCTTTTTAAT...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| 3UTR TCA 72 bp | CCACAGGGACAAATGTCAGGACAGCCGTCAGTGTGCTaGGTGCCAGGGCAGCAGCTCTCTTTTGAAAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: PQGQMSGQPSVC*VPGQQLSFESH Trigger: GTGACTTTCAAAAGAGAGCTGCTGCCCTGGCACTCAGCACACTGACGGCTGTCCTGACATTTGTCCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CCA 72 bp | TGGGCTTTACAAAAGGCCCAGGGTTTGTATGCTACTTaGCCACAGGGACAAATGTCAGGACAGCCGTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: WALQKAQGLYAT*PQGQMSGQPSV Trigger: CACTGACGGCTGTCCTGACATTTGTCCCTGTGGCCAAGTAGCATACAAACCCTGGGCCTTTTGTAAAGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CCA 72 bp | GAGTGCCAGGGCAGCAGCTCTCTTTTGAAAGTCACATaGTGTTCACAGGTCCCACCTCATGTTCTCTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: ECQGSSSLLKVT*CSQVPPHVLFR Trigger: CCTAAAGAGAACATGAGGTGGGACCTGTGAACACCATGTGACTTTCAAAAGAGAGCTGCTGCCCTGGCACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CCA 72 bp | ATCAGGATTCAATGGTGGCCTGGAGAGATGGCTCAGTaGTTAAGAGCACTGACTCTTCTTCCAGAGGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: IRIQWWPGEMAQ*LRALTLLPEVL Trigger: CAGGACCTCTGGAAGAAGAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGGCCACCATTGAATCCTGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR TCA 72 bp | TCACAGGTCCCACCTCATGTTCTCTTTAGGGAAGTATaGAGAGCAGAGGCAGCTCCTTCCCTCTGTGACATT | + |
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Preference number: 3 (lower is better) Translates to: SQVPPHVLFREV*RAEAAPSLCDI Trigger: AATGTCACAGAGGGAAGGAGCTGCCTCTGCTCTTCATACTTCCCTAAAGAGAACATGAGGTGGGACCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTGTAATGGAATCTaGTGCCCTTTTCTGGTGTGTCTGAAGACAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: TTWWLTTICNGI*CPFLVCLKTAT Trigger: TGTAGCTGTCTTCAGACACACCAGAAAAGGGCATCAGATTCCATTACAGATGGTTGTGAGCCACCATGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR GCA 72 bp | GATTCAATGGTATGCCTAAGAAAGACTAGGTGGGCATaGTGGGCTTTACAAAAGGCCCAGGGTTTGTATGCT | + |
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Preference number: 3 (lower is better) Translates to: DSMVCLRKTRWA*WALQKAQGLYA Trigger: AGCATACAAACCCTGGGCCTTTTGTAAAGCCCAGCATGCCCACCTAGTCTTTCTTAGGCATACCATTGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR CCA 72 bp | GAGATTCTTTTGTATTCATCAAACACGTGGAGCAGATaGTTCCGGTTCCGGGAACAGAGAATGCTTAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: EILLYSSNTWSR*FRFREQRMLRN Trigger: ATTCCTAAGCATTCTCTGTTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CAA 90 bp | GATTCTTTTGTATTCATCAAACACGTGGAGCAGATGGTTCCGGTTCCGGGAACAGGGCTTGTGAGAACTTaGGATCTGTCTAAAATAAGA | + |
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Preference number: 3 (lower is better) Translates to: DSFVFIKHVEQMVPVPGTGLVRT*DLSKIR Trigger: TCTTATTTTAGACAGATCCAAAGTTCTCACAAGCCC...TGTTCCCGGAACCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CAA 90 bp | ACTCCGCATGCACTTCACTATAGCCAACAGGGCATCTTCAAAGCTTCCAGATGTCACTTGAGATTGAACTaGTTTGATGAGTTGGTAACT | + |
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Preference number: 3 (lower is better) Translates to: TPHALHYSQQGIFKASRCHLRLN*FDELVT Trigger: AGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG...ACATCTGGAAGCTTTGAAGATGCCCTGTTGGCTATAGTGAAGTGCATGCGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CAA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAGGCAGCAGCTCTCTTTaGAAAGTCACATGGTGTTCA | + |
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Preference number: 3 (lower is better) Translates to: STSTKHKRGNNLIKTWSTGSSSL*KVTWCS Trigger: TGAACACCATGTGACTTTCAAAAGAGAGCTGCTGCC...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| 3UTR-3UTR CAA 90 bp | CATTCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCCTCTTGACTGTCACTTaGAGCAAGATTAGGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSTSTKHKRGNNLIKTWSLLTVT*SKIRTV Trigger: CACTGTCCTAATCTTGCTCAAAGTGACAGTCAAGAG...GCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| 3UTR-3UTR CAA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACATCTGCTGAGCCACACTaGAGATTGAACTTGTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: STSTKHKRGNNLIKTWSTSAEPH*RLNLFD Trigger: ATCAAACAAGTTCAATCTCAAGTGTGGCTCAGCAGA...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| 3UTR TCA 72 bp | TCTGTAATGGAATCTGATGCCCTTTTCTGGTGTGTCTaGAGACAGCTACAGTGTACTCAGATACACAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SVMESDALFWCV*RQLQCTQIHKI Trigger: TATTTTGTGTATCTGAGTACACTGTAGCTGTCTTCAGACACACCAGAAAAGGGCATCAGATTCCATTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| 3UTR-3UTR CAA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCGGGCTTGTGAGAACTTaGGATCTGTCTAAAATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLRLNLFDELVTLFHTLPGLVRT*DLSKIR Trigger: TCTTATTTTAGACAGATCCAAAGTTCTCACAAGCCC...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| 3UTR CAA 72 bp | CAGCTCCTTCCCTCTGTGACATTCAGCGCTGAGCACTaGCATAGCGTGGGGCACGTCCTGGGTTCCGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLLPSVTFSAEH*HSVGHVLGSVP Trigger: AGGAACGGAACCCAGGACGTGCCCCACGCTATGCAAGTGCTCAGCGCTGAATGTCACAGAGGGAAGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTAGAAGGAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RVEGDEASPTIFSNCQLRSCRHS*SPGAGR Trigger: CCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGA...TCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | TGCCAGGGCAGCAGCTCTCTTTTGAAAGTCACATGGTGTTCACAGGTCCCACCTTCAGGTCCCTGCCAATaGTGCTCTTGTAGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQGSSSLLKVTWCSQVPPSGPCQ*CSCRHS Trigger: GGAGTGCCTACAAGAGCACCATTGGCAGGGACCTGA...AGGTGGGACCTGTGAACACCATGTGACTTTCAAAAGAGAGCTGCTGCCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | GACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGTCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DDNNIVCIPGGNWRRFNWSCRHS*SPGAGR Trigger: CCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGA...CCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCGCACTCCTGATCTCCTaGCGCTGGGCGGTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YDDRQSQRKGACENFGSVALLIS*RWAVFL Trigger: CAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGC...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | TACTTGGCCACAGGGACAAATGTCAGGACAGCCGTCAGTGTGCTGAGTGCCAGGCATCTTCAGTTGCGTTaGATCCTGAAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLATGTNVRTAVSVLSARHLQLR*ILKQLS Trigger: TGAAAGCTGCTTCAGGATTCAACGCAACTGAAGATG...CCTGGCACTCAGCACACTGACGGCTGTCCTGACATTTGTCCCTGTGGCCAAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGTCCTGCGGCGTCTTGTGTTAATCATCTCCTCCACAGAGAACGAGCAGTCACCTGCTCAAAGTTaGTGCTCAGCTCCGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVLRRLVLIISSTENEQSPAQS*CSAPTS Trigger: TGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGA...CTGCTCGTTCTCTGTGGAGGAGATGATTAACACAAGACGCCGCAGGACAGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | AATTCCCAGAAACCACATGGTGGCTCACAACCATCTGTAATGGAATCTGATGCCGCACTCCTGATCTCCTaGCGCTGGGCGGTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSQKPHGGSQPSVMESDAALLIS*RWAVFL Trigger: CAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGC...GGCATCAGATTCCATTACAGATGGTTGTGAGCCACCATGTGGTTTCTGGGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNSCRHS*SPGAGR Trigger: CCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGA...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | GAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATAGGCAGGCCTTCCTCAGGGTCTaGGCATCTTCAGTTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMKQAPPYSATVNYDDRQAFLRV*ASSVAL Trigger: CAACGCAACTGAAGATGCCCAGACCCTGAGGAAGGC...CTGCCTATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| 3UTR CAA 72 bp | CAGCCACACCCAGAGCATTGCATTATCAGAGCAACCTaGGCTGAGGCCACTCTTGACTGTCACTTTGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPHPEHCIIRAT*AEATLDCHFEQ Trigger: TTGCTCAAAGTGACAGTCAAGAGTGGCCTCAGCCAAGGTTGCTCTGATAATGCAATGCTCTGGGTGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | CTCCGCATGCACTTCACTATAGCCAACAGGGCATCTTCAAAGCTTCCAGATGTCGTTGTGTCCTCAGTGTaGGGAAGAGATCTGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: LRMHFTIANRASSKLPDVVVSSV*GRDLES Trigger: GGATTCCAGATCTCTTCCTCACACTGAGGACACAAC...GACATCTGGAAGCTTTGAAGATGCCCTGTTGGCTATAGTGAAGTGCATGCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | GACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGTCAGGTCCCTGCCAATaGTGCTCTTGTAGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDNNIVCIPGGNWRRFNWSGPCQ*CSCRHS Trigger: GGAGTGCCTACAAGAGCACCATTGGCAGGGACCTGA...CCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| 3UTR CAA 72 bp | GGAACGACCGAGCACACGGGATCTGCTGAGCCACACTaGAGATTGAACTTGTTTGATGAGTTGGTAACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTTEHTGSAEPH*RLNLFDELVTL Trigger: CAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTGTGGCTCAGCAGATCCCGTGTGCTCGGTCGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | ATGGGGGTTAAAGTCCTAAGGTTGGTATCAGGATTCAATGGTGGCCTGGAGAGAGTACTCGCTGGAACATaGAGGATGTGTCAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGVKVLRLVSGFNGGLERVLAGT*RMCQSR Trigger: TCTGCTCTGACACATCCTTCATGTTCCAGCGAGTAC...TCTCTCCAGGCCACCATTGAATCCTGATACCAACCTTAGGACTTTAACCCCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCTCACCTGCTCAAAGTTaGTGCTCAGCTCCGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YDDRQSQRKGACENFGSVSPAQS*CSAPTS Trigger: TGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGA...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | CGGTTCCGGGAACAGAGAATGCTTAGGAATTTCACCTCGTCTGTCCCCCATCTCCTTCCATATTGCTGCTaGTATGTCTGGTTGATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RFREQRMLRNFTSSVPHLLPYCC*YVWLIR Trigger: TCGAATCAACCAGACATACCAGCAGCAATATGGAAG...GAGATGGGGGACAGACGAGGTGAAATTCCTAAGCATTCTCTGTTCCCGGAACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATGCCTTCCTCAGGGTCTaGGCATCTTCAGTTGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNAFLRV*ASSVAL Trigger: CAACGCAACTGAAGATGCCCAGACCCTGAGGAAGGC...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCGCACTCCTGATCTCCTaGCGCTGGGCGGTGTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTSTKHKRGNNLIKTWSALLIS*RWAVFL Trigger: CAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGC...GCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | GATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGAAATCAGGTCCCTGCCAATaGTGCTCTTGTAGGCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DNNIVCIPGGNWRRFNWKSGPCQ*CSCRHS Trigger: GGAGTGCCTACAAGAGCACCATTGGCAGGGACCTGA...TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGGGTTAAAGTCCTAAGGTTGGTATCAGGATTCAATGGTGGCCTGGAGAGGCTCCTTCCATATTaGTGCTGGTATGTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMGVKVLRLVSGFNGGLERLLPY*CWYVWL Trigger: CAACCAGACATACCAGCAGCAATATGGAAGGAGCCT...CTCCAGGCCACCATTGAATCCTGATACCAACCTTAGGACTTTAACCCCCATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | GACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGGGGTGTTGTCATCAGTaGCTAAGCCCTTCATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: DDNNIVCIPGGNWRRFNWGCCHQ*LSPSWI Trigger: AATCCATGAAGGGCTTAGGCACTGATGACAACACCC...CCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
||
| CDS-3UTR TCA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATGTACTCGCTGGAACATaGAGGATGTGTCAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNVLAGT*RMCQSR Trigger: TCTGCTCTGACACATCCTTCATGTTCCAGCGAGTAC...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGAAGGAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGTGAGGAAGAGATCTaGAATCCAGGAGTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVEGDEASPTIFSNCQLRCEEEI*NPGVLK Trigger: TTTCAACACTCCTGGATTCCAGATCTCTTCCTCACA...TCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTCCTTCTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| 3UTR CAA 72 bp | ACCGAGCACACGGGATCTGCTGAGCCACACTTGAGATaGAACTTGTTTGATGAGTTGGTAACTCTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TEHTGSAEPHLR*NLFDELVTLFH Trigger: ATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTGTGGCTCAGCAGATCCCGTGTGCTCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATAGGCTCCTTCCATATTaGTGCTGGTATGTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNRLLPY*CWYVWL Trigger: CAACCAGACATACCAGCAGCAATATGGAAGGAGCCT...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAGTACTCGCTGGAACATaGAGGATGTGTCAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STSTKHKRGNNLIKTWSTVLAGT*RMCQSR Trigger: TCTGCTCTGACACATCCTTCATGTTCCAGCGAGTAC...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | CATTCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCTCACCTGCTCAAAGTTaGTGCTCAGCTCCGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTSTKHKRGNNLIKTWSSPAQS*CSAPTS Trigger: TGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGA...GCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | CATTCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCGTCAATCTCTGCTCTTaGGACCATCACTCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSTSTKHKRGNNLIKTWSVNLCS*DHHSDE Trigger: CTCATCAGAGTGATGGTCTCAAGAGCAGAGATTGAC...GCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCGTCAATCTCTGCTCTTaGGACCATCACTCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLRLNLFDELVTLFHTLPVNLCS*DHHSDE Trigger: CTCATCAGAGTGATGGTCTCAAGAGCAGAGATTGAC...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
||
| CDS-3UTR GCA 90 bp | GATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGAAACTCCTTCCATATTGCTaGTGGTATGTCTGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DNNIVCIPGGNWRRFNWKLLPYC*WYVWLI Trigger: AATCAACCAGACATACCAGCAGCAATATGGAAGGAG...TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCAGGCTCCTTCCATATTaGTGCTGGTATGTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLRLNLFDELVTLFHTLPRLLPY*CWYVWL Trigger: CAACCAGACATACCAGCAGCAATATGGAAGGAGCCT...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAGGGTGTTGTCATCAGTaGCTAAGCCCTTCATGGATT | + |
|
Preference number: 4 (lower is better) Translates to: STSTKHKRGNNLIKTWSTGCCHQ*LSPSWI Trigger: AATCCATGAAGGGCTTAGGCACTGATGACAACACCC...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
||
| 3UTR CAA 72 bp | TTAATGCTCTGTTCAATGTCCTTCTGTGAGATTCTTTaGTATTCATCAAACACGTGGAGCAGATGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLCSMSFCEIL*YSSNTWSRWFR Trigger: CCGGAACCATCTGCTCCACGTGTTTGATGAATACAAAAGAATCTCACAGAAGGACATTGAACAGAGCATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
||
| CDS-3UTR TCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACACATCTTCAGTTGCGTTaGATCCTGAAGCAGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSTKHKRGNNLIKTWSTHLQLR*ILKQLS Trigger: TGAAAGCTGCTTCAGGATTCAACGCAACTGAAGATG...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR GCA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACACTCCTTCCATATTGCTaGTGGTATGTCTGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: STSTKHKRGNNLIKTWSTLLPYC*WYVWLI Trigger: AATCAACCAGACATACCAGCAGCAATATGGAAGGAG...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | CATTCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCCTTCCATATTGCTGCTaGTATGTCTGGTTGATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSTSTKHKRGNNLIKTWSLPYCC*YVWLIR Trigger: TCGAATCAACCAGACATACCAGCAGCAATATGGAAG...GCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS-3UTR CCA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCCTTCCATATTGCTGCTaGTATGTCTGGTTGATTCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLRLNLFDELVTLFHTLPLPYCC*YVWLIR Trigger: TCGAATCAACCAGACATACCAGCAGCAATATGGAAG...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
||
| CDS TCA 90 bp | AGTCCTCAATCAGGTCCCTGCCAATGGTGCTCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGGTGTTTCTGTAGGCTAAGATTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SPQSGPCQWCSCRHS*SPGAGRCFCRLRFR Trigger: TCGGAATCTTAGCCTACAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGAGCACCATTGGCAGGGACCTGATTGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
||
| CDS CCA 90 bp | TTTCCTTCATCCCTGCCAGCCGCCGACAGGGACACCAGTACTCGCTaGAACATGAAGGATGTGTCAGAGCAGATGTCCTCTTCAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSSLPAADRDTSTR*NMKDVSEQMSSSRL Trigger: GAGCCTTGAAGAGGACATCTGCTCTGACACATCCTTCATGTTCCAGCGAGTACTGGTGTCCCTGTCGGCGGCTGGCAGGGATGAAGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS-3UTR CAA 90 bp | GACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGATCACCTGCTCAAAGTaGCTGCTCAGCTCCGACTTC | + |
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Preference number: 5 (lower is better) Translates to: DDNNIVCIPGGNWRRFNWITCSK*LLSSDF Trigger: GAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGAT...CCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | TACGATGATAGGCAGAGCCAAAGAAAGGGGGCTTGTGAGAACTTTGGATCTGTCGCATCTTCAGTTGCGTaGAATCCTGAAGCAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: YDDRQSQRKGACENFGSVASSVA*NPEAAF Trigger: GAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGC...GACAGATCCAAAGTTCTCACAAGCCCCCTTTCTTTGGCTCTGCCTATCATCGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | ACTCCGCATGCACTTCACTATAGCCAACAGGGCATCTTCAAAGCTTCCAGATGTGCATCTTCAGTTGCGTaGAATCCTGAAGCAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: TPHALHYSQQGIFKASRCASSVA*NPEAAF Trigger: GAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGC...ACATCTGGAAGCTTTGAAGATGCCCTGTTGGCTATAGTGAAGTGCATGCGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | GATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGAAAATCACCTGCTCAAAGTaGCTGCTCAGCTCCGACTTC | + |
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Preference number: 5 (lower is better) Translates to: DNNIVCIPGGNWRRFNWKITCSK*LLSSDF Trigger: GAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGAT...TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATACTCTGATGAGGGTGTaGTCATCAGTGCCTAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNTLMRV*SSVPKP Trigger: GGGCTTAGGCACTGATGACAACACCCTCATCAGAGT...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS-3UTR CAA 90 bp | CACTTGAGATTGAACTTGTTTGATGAGTTGGTAACTCTGTTTCATACACTTCCCTGGAATCCAGGAGTGTaGAAAGACCTGGGCGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HLRLNLFDELVTLFHTLPWNPGV*KDLGVL Trigger: CAGGACGCCCAGGTCTTTCAACACTCCTGGATTCCA...GGGAAGTGTATGAAACAGAGTTACCAACTCATCAAACAAGTTCAATCTCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAACTCTGATGAGGGTGTaGTCATCAGTGCCTAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: STSTKHKRGNNLIKTWSTTLMRV*SSVPKP Trigger: GGGCTTAGGCACTGATGACAACACCCTCATCAGAGT...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS-3UTR CAA 90 bp | ATAGACGATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATCCGGAAGTGTCACCCTaGATGAAAGAGTACAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: IDDNNIVCIPGGNWRRFNPEVSP*MKEYKD Trigger: GTCTTTGTACTCTTTCATCAAGGGTGACACTTCCGG...ATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATCGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS-3UTR CAA 90 bp | GAGATGAAGCAAGCCCCACCATATTCAGCAACTGTCAACTACGATGATAGGCAGTTCTGTGAGATTCTTTaGTATTCATCAAACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: EMKQAPPYSATVNYDDRQFCEIL*YSSNTW Trigger: CCACGTGTTTGATGAATACAAAAGAATCTCACAGAA...CTGCCTATCATCGTAGTTGACAGTTGCTGAATATGGTGGGGCTTGCTTCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS-3UTR CAA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACAGCATCTTCAGTTGCGTaGAATCCTGAAGCAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: STSTKHKRGNNLIKTWSTASSVA*NPEAAF Trigger: GAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGC...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 |
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| CDS-3UTR CAA 90 bp | TCAACCTCTACAAAACACAAACGAGGAAATAATCTGATAAAGACGTGGAGCACACCGGAAGTGTCACCCTaGATGAAAGAGTACAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: STSTKHKRGNNLIKTWSTPEVSP*MKEYKD Trigger: GTCTTTGTACTCTTTCATCAAGGGTGACACTTCCGG...TGTGCTCCACGTCTTTATCAGATTATTTCCTCGTTTGTGTTTTGTAGAGGTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS-3UTR CAA 90 bp | GATAATAACATAGTCTGCATCCCAGGAGGCAACTGGAGGCGTTTTAATTGGAAATTCTGTGAGATTCTTTaGTATTCATCAAACACGTGG | + |
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Preference number: 5 (lower is better) Translates to: DNNIVCIPGGNWRRFNWKFCEIL*YSSNTW Trigger: CCACGTGTTTGATGAATACAAAAGAATCTCACAGAA...TTTCCAATTAAAACGCCTCCAGTTGCCTCCTGGGATGCAGACTATGTTATTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 |
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| CDS TCA 72 bp | TGCCAGCCCTGCCAATGGTGCTCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGGTGTTTCTGTAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: CQPCQWCSCRHS*SPGAGRCFCRL Trigger: TAGCCTACAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGAGCACCATTGGCAGGGCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155456.8 |
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| CDS TCA 72 bp | TCAGGTCCCTGCCAATGGTGCTCTTGTAGGCACTCCTaGTCTCCTGGCGCTGGGCGGTGTTTCTGTAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: SGPCQWCSCRHS*SPGAGRCFCRL Trigger: TAGCCTACAGAAACACCGCCCAGCGCCAGGAGATCAGGAGTGCCTACAAGAGCACCATTGGCAGGGACCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS GCA 72 bp | GACAGCCCTCGTCCGTGCCAGCTCCCTGCTCAAAGTTaGTGCTCAGCTCCGACTTCAAGTCCTCAATCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DSPRPCQLPAQS*CSAPTSSPQSG Trigger: ACCTGATTGAGGACTTGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGGAGCTGGCACGGACGAGGGCTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123732.4 |
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| CDS CCA 72 bp | TCCCTGCCAGCCGCCGACAGGGACACCAGTACTCGCTaGAACATGAAGGATGTGTCAGAGCAGATGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLPAADRDTSTR*NMKDVSEQMSS Trigger: AGAGGACATCTGCTCTGACACATCCTTCATGTTCCAGCGAGTACTGGTGTCCCTGTCGGCGGCTGGCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CAA 72 bp | AGACAGCCCTCGTCCGTGCCAGCTCCCTGCTCAAAGTaGCTGCTCAGCTCCGACTTCAAGTCCTCAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RQPSSVPAPCSK*LLSSDFKSSIR Trigger: CCTGATTGAGGACTTGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGGAGCTGGCACGGACGAGGGCTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123732.4 |
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| CDS GCA 72 bp | ATCTCAATCAGACAGCCCTCGTCCGTGCCAGCTCCCTaGTCAAAGTTGCTGCTCAGCTCCGACTTCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: ISIRQPSSVPAP*SKLLLSSDFKS Trigger: GGACTTGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGGAGCTGGCACGGACGAGGGCTGTCTGATTGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123732.4 |
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| CDS GCA 72 bp | TACAGCACTGTGGGTGTCATCAGCCCCAGGATCACCTaGTCAAAGTTGCTGCTCAGCTCCGACTTCAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: YSTVGVISPRIT*SKLLLSSDFKS Trigger: GGACTTGAAGTCGGAGCTGAGCAGCAACTTTGAGCAGGTGATCCTGGGGCTGATGACACCCACAGTGCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS TCA 72 bp | TGGCCTTCCTCAGGGTCTGGGCATCTTCAGTTGCGTTaGATCCTGAAGCAGCTTTCACGGTTCCTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: WPSSGSGHLQLR*ILKQLSRFLLW Trigger: CCAAAGGAGGAACCGTGAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGCCCAGACCCTGAGGAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS TCA 72 bp | CAAGGCTCCTTCCATATTGCTGCTGGTATGTCTGGTTaGTTCGACGGATCTCCTCAGGGGTACGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QGSFHIAAGMSG*FDGSPQGYERP Trigger: TGGCCTCTCGTACCCCTGAGGAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CAA 72 bp | TCAAGGCTCCTTCCATATTGCTGCTGGTATGTCTGGTaGATTCGACGGATCTCCTCAGGGGTACGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SRLLPYCCWYVW*IRRISSGVREA Trigger: GGCCTCTCGTACCCCTGAGGAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS TCA 72 bp | CCTCAGGGTCTGGGCATCTTCAGTTGCGTTGAATCCTaGAGCAGCTTTCACGGTTCCTCCTTTGGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: PQGLGIFSCVES*SSFHGSSFGFH Trigger: ATGGAAGCCAAAGGAGGAACCGTGAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGCCCAGACCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CCA 72 bp | GGATCCTTGTTGTGTCCTCAGTGTGAGGAAGAGATCTaGAATCCAGGAGTGTTGAAAGACCTGGGCGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLLCPQCEEEI*NPGVLKDLGVL Trigger: CAGGACGCCCAGGTCTTTCAACACTCCTGGATTCCAGATCTCTTCCTCACACTGAGGACACAACAAGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| CDS CAA 72 bp | ATGGCCTTCCTCAGGGTCTGGGCATCTTCAGTTGCGTaGAATCCTGAAGCAGCTTTCACGGTTCCTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: MAFLRVWASSVA*NPEAAFTVPPL Trigger: CAAAGGAGGAACCGTGAAAGCTGCTTCAGGATTCAACGCAACTGAAGATGCCCAGACCCTGAGGAAGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CCA 72 bp | TCTTCAAGGCTCCTTCCATATTGCTGCTGGTATGTCTaGTTGATTCGACGGATCTCCTCAGGGGTACGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSRLLPYCCWYV*LIRRISSGVRE Trigger: CTCTCGTACCCCTGAGGAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS TCA 72 bp | CTCAGTGTGAGGAAGAGATCTGGAATCCAGGAGTGTTaGAAGACCTGGGCGTCCTGCTTCATAAGAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LSVRKRSGIQEC*KTWASCFIRAS Trigger: TGATGCTCTTATGAAGCAGGACGCCCAGGTCTTTCAACACTCCTGGATTCCAGATCTCTTCCTCACACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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| CDS GCA 72 bp | GAGCAGATGTCCTCTTCAAGGCTCCTTCCATATTGCTaGTGGTATGTCTGGTTGATTCGACGGATCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: EQMSSSRLLPYC*WYVWLIRRISS Trigger: TGAGGAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTGAAGAGGACATCTGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS GCA 72 bp | TCAGAGCAGATGTCCTCTTCAAGGCTCCTTCCATATTaGTGCTGGTATGTCTGGTTGATTCGACGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SEQMSSSRLLPY*CWYVWLIRRIS Trigger: GGAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTGAAGAGGACATCTGCTCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CAA 72 bp | GTCAGAGCAGATGTCCTCTTCAAGGCTCCTTCCATATaGCTGCTGGTATGTCTGGTTGATTCGACGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: VRADVLFKAPSI*LLVCLVDSTDL Trigger: GAGATCCGTCGAATCAACCAGACATACCAGCAGCAATATGGAAGGAGCCTTGAAGAGGACATCTGCTCTGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000001187.15 ENSMUST00000113675.8 ENSMUST00000123732.4 ENSMUST00000127152.9 ENSMUST00000204398.2 ENSMUST00000204441.3 |
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| CDS CAA 90 bp | TTGTTGTGTCCTCAGTGTGAGGAAGAGATCTGGAATCCAGGAGTGTaGAAAGACCTGGGCGTCCTGCTTCATAAGAGCATCATCAAGGTA | + |
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Preference number: 6 (lower is better) Translates to: LLCPQCEEEIWNPGV*KDLGVLLHKSIIKV Trigger: TACCTTGATGATGCTCTTATGAAGCAGGACGCCCAGGTCTTTCAACACTCCTGGATTCCAGATCTCTTCCTCACACTGAGGACACAACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127152.9 |
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