Pregenerated sensors for ANXA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029484Ensembl transcript IDs: ENSMUST00000031447.12, ENSMUST00000196126.2, ENSMUST00000198631.2, ENSMUST00000199330.5, ENSMUST00000200379.5
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCAGACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTaGATGAAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACCATCAG | + |
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Preference number: 1 (lower is better) Translates to: QADRFCLAFACTLEC*MKAVCRDFEAVHHQ Trigger: CTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR CCA 90 bp | TCTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCCACTTTTCTGTaGGTTCGAGGAATTGGACCCTGTTTGCCAGAGATAATGGCAAGT | + |
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Preference number: 1 (lower is better) Translates to: SLSSLSLSLSLSTFL*VRGIGPCLPEIMAS Trigger: ACTTGCCATTATCTCTGGCAAACAGGGTCCAATTCCTCGAACCCACAGAAAAGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR TCA 90 bp | CACATTAATATGTATATGCTTGGTGGGAGCACCACAGTGCAAGTGTaGAGGTCAGAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: HINMYMLGGSTTVQV*RSEEYPMEANHSLS Trigger: AGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTCTGACCTTCACACTTGCACTGTGGTGCTCCCACCAAGCATATACATATTAATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR GCA 90 bp | ATTTATTACACATTAATATGTATATGCTTGGTGGGAGCACCACAGTaGAAGTGTGAAGGTCAGAGGAGTACCCTATGGAGGCGAATCACT | + |
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Preference number: 1 (lower is better) Translates to: IYYTLICICLVGAPQ*KCEGQRSTLWRRIT Trigger: AGTGATTCGCCTCCATAGGGTACTCCTCTGACCTTCACACTTGCACTGTGGTGCTCCCACCAAGCATATACATATTAATGTGTAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR TCA 90 bp | ATGTGCTCACATAGGATCACTTCCGAGGTATTGGGGACAAAGTCCTaGAACAGATCATTTATTTTCCTGGCTTTACTACCTAGTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: MCSHRITSEVLGTKS*NRSFIFLALLPSSY Trigger: ATAAGAACTAGGTAGTAAAGCCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGATCCTATGTGAGCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR CCA 90 bp | CCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTaGCTTTACTACCTAGTTCTTATGGTAGTCTTATGTCTTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: PRYWGQSPETDHLFS*LYYLVLMVVLCLLL Trigger: GAGAAGAAGACATAAGACTACCATAAGAACTAGGTAGTAAAGCCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCCATACACACATGGCTGAAGAGAGATTGTGAGCCAACACGTGAGGGTGACCTCTCCACTTTTCTGTaGGTTCGAGGAATTGGACCC | + |
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Preference number: 2 (lower is better) Translates to: IPIHTWLKRDCEPTREGDLSTFL*VRGIGP Trigger: GGGTCCAATTCCTCGAACCCACAGAAAAGTGGAGAG...GTCACCCTCACGTGTTGGCTCACAATCTCTCTTCAGCCATGTGTGTATGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR TCA 90 bp | AGCCTTCCAAGTAAGGTGAGCAGTGGCCTCATGTGCTCACATAGGATCACTTCCAAACATGGCGGAAAATaGGCAACTTTGAGCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: SLPSKVSSGLMCSHRITSKHGGK*ATLSLG Trigger: ACCTAAGCTCAAAGTTGCTCATTTTCCGCCATGTTT...GGAAGTGATCCTATGTGAGCACATGAGGCCACTGCTCACCTTACTTGGAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTGGCAGAACTGCACACTGTaGATCTCAATGGAAACACTT | + |
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Preference number: 2 (lower is better) Translates to: SLPRYWGQSPETDHLFSWQNCTL*ISMETL Trigger: AAGTGTTTCCATTGAGATTCACAGTGTGCAGTTCTG...CCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR TCA 90 bp | GATCACTTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTCAAATGTCATGTGCATaGATCGTTTCACAGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: DHFRGIGDKVLKQIIYFPQMSCA*IVSQKV Trigger: CACTTTCTGTGAAACGATTCATGCACATGACATTTG...AGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAAGCTTGCACTTTAGAGTaGTGCATGAAAGCAGTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQACTLE*CMKAVC Trigger: GCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGC...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTGGCTTTAAAGCAAATGTCATGTaGATGAATCGTTTCACAGAA | + |
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Preference number: 2 (lower is better) Translates to: FRGIGDKVLKQIIYFPGFKANVM*MNRFTE Trigger: TTCTGTGAAACGATTCATGCACATGACATTTGCTTT...AAAGCCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTACACAGATTCCAACTTCCTAAGCCAAACAGAAAATCATTAGTAGGTCTTAATCAAGTTCATTTTTaGCATTGCACTGAACGATGC | + |
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Preference number: 2 (lower is better) Translates to: ELHRFQLPKPNRKSLVGLNQVHF*HCTERC Trigger: GCATCGTTCAGTGCAATGGCAAAAATGAACTTGATT...AAGACCTACTAATGATTTTCTGTTTGGCTTAGGAAGTTGGAATCTGTGTAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCTATCAGGCAGACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTGCAGTGTGCAGAGATTTaGAGGCGGTCCACCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: CLSGRQVLSCICLHFRVLQCAEI*RRSTIR Trigger: CCTGATGGTGGACCGCCTCAAAATCTCTGCACACTG...CAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR TCA 72 bp | ATGTATATGCTTGGTGGGAGCACCACAGTGCAAGTGTaGAGGTCAGAGGAGTACCCTATGGAGGCGAATCAC | + |
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Preference number: 3 (lower is better) Translates to: MYMLGGSTTVQV*RSEEYPMEANH Trigger: GTGATTCGCCTCCATAGGGTACTCCTCTGACCTTCACACTTGCACTGTGGTGCTCCCACCAAGCATATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR GCA 72 bp | ATAAGCCTTCCAAGTAAGGTGAGCAGTGGCCTCATGTaGTCACATAGGATCACTTCCGAGGTATTGGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: ISLPSKVSSGLM*SHRITSEVLGT Trigger: TGTCCCCAATACCTCGGAAGTGATCCTATGTGAGCACATGAGGCCACTGCTCACCTTACTTGGAAGGCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR CCA 72 bp | GCATGTGTGTATGTGTGCCTGATACCCATACACACATaGCTGAAGAGAGATTGTGAGCCAACACGTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ACVYVCLIPIHT*LKRDCEPTREG Trigger: ACCCTCACGTGTTGGCTCACAATCTCTCTTCAGCCATGTGTGTATGGGTATCAGGCACACATACACACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR CAA 90 bp | ATACCCATACACACATGGCTGAAGAGAGATTGTGAGCCAACACGTGAGGGTGACGGAATTGGACCCTGTTaGCCAGAGATAATGGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: IPIHTWLKRDCEPTREGDGIGPC*PEIMAS Trigger: ACTTGCCATTATCTCTGGCAAACAGGGTCCAATTCC...GTCACCCTCACGTGTTGGCTCACAATCTCTCTTCAGCCATGTGTGTATGGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR TCA 72 bp | GAGCTTAGGTGGGCGGTGCATCAGAACTGCACACTGTaGATCTCAATGGAAACACTTGTAATCTGTAGACCG | + |
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Preference number: 3 (lower is better) Translates to: ELRWAVHQNCTL*ISMETLVICRP Trigger: CGGTCTACAGATTACAAGTGTTTCCATTGAGATTCACAGTGTGCAGTTCTGATGCACCGCCCACCTAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR GCA 72 bp | CGATGCCAATGCCTATCAGGCAGACAGGTTCTGTCTTaGATTTGCTTGCACTTTAGAGTGCTGCATGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: RCQCLSGRQVLS*ICLHFRVLHES Trigger: GCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCATTGGCATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR CCA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCCACTTTTCTGTaGGTTCGAGGAATTGGACCCTGTTTGCCAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLSLSTFL*VRGIGPCLPEI Trigger: TATCTCTGGCAAACAGGGTCCAATTCCTCGAACCCACAGAAAAGTGGAGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCTTCCAAGTAAGGTGAGCAGTGGCCTCATGTGCTCACATAGGATCACTTCCAACCAAGGCATTTTGTaGTGGTTAGATCGCCACATA | + |
|
Preference number: 3 (lower is better) Translates to: SLPSKVSSGLMCSHRITSNQGIL*WLDRHI Trigger: TATGTGGCGATCTAACCACAACAAAATGCCTTGGTT...GGAAGTGATCCTATGTGAGCACATGAGGCCACTGCTCACCTTACTTGGAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR CAA 90 bp | GAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCTCTCTCCTCTCTCTCTCTCACAAATGGATATTCTTaGCAACCCAGAAGAATTCTG | + |
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Preference number: 3 (lower is better) Translates to: EEYPMEANHSLSLSSLSLTNGYS*QPRRIL Trigger: CAGAATTCTTCTGGGTTGCAAAGAATATCCATTTGT...GAGAGAGAGAGAGGAGAGAGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR GCA 72 bp | AGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTaGATGAAAGCAGTGTGCAGAGATTTTGAGGCGGTC | + |
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Preference number: 3 (lower is better) Translates to: RFCLAFACTLEC*MKAVCRDFEAV Trigger: GACCGCCTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR GCA 72 bp | GACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTaGTGCATGAAAGCAGTGTGCAGAGATTTTGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: DRFCLAFACTLE*CMKAVCRDFEA Trigger: CGCCTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR GCA 72 bp | CAAGTTCATTTTTGCCATTGCACTGAACGATGCCAATaGCTATCAGGCAGACAGGTTCTGTCTTGCATTTGC | + |
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Preference number: 3 (lower is better) Translates to: QVHFCHCTERCQ*LSGRQVLSCIC Trigger: GCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCATTGGCATCGTTCAGTGCAATGGCAAAAATGAACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR GCA 72 bp | ATGTGTGTGGGTACTTTGTGTGCATGTGTGTATGTGTaGCTGATACCCATACACACATGGCTGAAGAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: MCVGTLCACVYV*LIPIHTWLKRD Trigger: ATCTCTCTTCAGCCATGTGTGTATGGGTATCAGGCACACATACACACATGCACACAAAGTACCCACACACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR-3UTR CAA 90 bp | GAACTACACAGATTCCAACTTCCTAAGCCAAACAGAAAATCATTAGTAGGTCTTCAGTGTGCAGAGATTTaGAGGCGGTCCACCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: ELHRFQLPKPNRKSLVGLQCAEI*RRSTIR Trigger: CCTGATGGTGGACCGCCTCAAAATCTCTGCACACTG...AAGACCTACTAATGATTTTCTGTTTGGCTTAGGAAGTTGGAATCTGTGTAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000196126.2 |
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| 3UTR TCA 72 bp | ATCTCAATGGAAACACTTGTAATCTGTAGACCGATCTaGGCCAACCAAGGCATTTTGTTGTGGTTAGATCGC | + |
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Preference number: 3 (lower is better) Translates to: ISMETLVICRPI*ANQGILLWLDR Trigger: GCGATCTAACCACAACAAAATGCCTTGGTTGGCTCAGATCGGTCTACAGATTACAAGTGTTTCCATTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| 3UTR TCA 72 bp | CATAGGATCACTTCCGAGGTATTGGGGACAAAGTCCTaGAACAGATCATTTATTTTCCTGGCTTTACTACCT | + |
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Preference number: 3 (lower is better) Translates to: HRITSEVLGTKS*NRSFIFLALLP Trigger: AGGTAGTAAAGCCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGATCCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR GCA 90 bp | AGAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCTCTCTCCTCTCTCTCTCTAGAGCCACCATGACGTaGTCGAAGTGGCCAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RGVPYGGESLSLSLLSLSRATMT*SKWPER Trigger: TCTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCT...AGAGAGAGAGAGGAGAGAGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR GCA 90 bp | AAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACCATCAGGGCAGGCAGCCATTGTTTCCTTCATCTGCCTaGTTGACCTGGTTGTTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KAVCRDFEAVHHQGRQPLFPSSA*LTWLLG Trigger: TCCTAACAACCAGGTCAAGCAGGCAGATGAAGGAAA...CAATGGCTGCCTGCCCTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR CCA 90 bp | TGCACTTTAGAGTGCTGCATGAAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACATGACGTGCTCGAAGTaGCCAGAGAGATCACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CTLECCMKAVCRDFEAVHMTCSK*PERSPF Trigger: GAAGGGTGATCTCTCTGGCCACTTCGAGCACGTCAT...GTGGACCGCCTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR CCA 90 bp | GAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCTCTCTCCTCTCTCTCTCTCCGACGGGCTAAAGCCTaGATAATCTTTTATGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: EEYPMEANHSLSLSSLSLRRAKA*IIFYGS Trigger: GGAACCATAAAAGATTATCCAGGCTTTAGCCCGTCG...GAGAGAGAGAGAGGAGAGAGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR CCA 90 bp | AAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACCATCAGGGCAGGCAGCCATTGTCTGAGCATCCTTTTTaGCCAGATGTTCATCCACTT | + |
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Preference number: 4 (lower is better) Translates to: KAVCRDFEAVHHQGRQPLSEHPF*PDVHPL Trigger: AAGTGGATGAACATCTGGCCAAAAAGGATGCTCAGA...CAATGGCTGCCTGCCCTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR TCA 90 bp | AAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACCATCAGGGCAGGCAGCCATTGTTATTCTGTTCAGAGTaGATTCATCTGTTCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: KAVCRDFEAVHHQGRQPLLFCSE*IHLFQH Trigger: GTGCTGGAACAGATGAATTCACTCTGAACAGAATAA...CAATGGCTGCCTGCCCTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR GCA 90 bp | ATACCCATACACACATGGCTGAAGAGAGATTGTGAGCCAACACGTGAGGGTGACGGGCATCTTCATCTGTaGCAGTTCCCTTCATGGATT | + |
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Preference number: 4 (lower is better) Translates to: IPIHTWLKRDCEPTREGDGHLHL*QFPSWI Trigger: AATCCATGAAGGGAACTGGCACAGATGAAGATGCCC...GTCACCCTCACGTGTTGGCTCACAATCTCTCTTCAGCCATGTGTGTATGGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR GCA 90 bp | ATACCCATACACACATGGCTGAAGAGAGATTGTGAGCCAACACGTGAGGGTGACTGTGAACTCCCTGAATaGGAGGGGAAGCAGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: IPIHTWLKRDCEPTREGDCELPE*EGKQRI Trigger: TATTCTCTGCTTCCCCTCGCATTCAGGGAGTTCACA...GTCACCCTCACGTGTTGGCTCACAATCTCTCTTCAGCCATGTGTGTATGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR CCA 90 bp | TGCCTATCAGGCAGACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTGCTGGATAATCTTTTATaGTTCCTCGAGGTCCAACCC | + |
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Preference number: 4 (lower is better) Translates to: CLSGRQVLSCICLHFRVLLDNLL*FLEVQP Trigger: GGGTTGGACCTCGAGGAACCATAAAAGATTATCCAG...CAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR GCA 90 bp | TTTGCTTGCACTTTAGAGTGCTGCATGAAAGCAGTGTGCAGAGATTTTGAGGCGCTCCTGTTCATACGCTaGTTGGTACTGCTTGACAAT | + |
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Preference number: 4 (lower is better) Translates to: FACTLECCMKAVCRDFEALLFIR*LVLLDN Trigger: ATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAG...CGCCTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR GCA 90 bp | GCATTTGCTTGCACTTTAGAGTGCTGCATGAAAGCAGTGTGCAGAGATTTTGAGGGGCATCTTCATCTGTaGCAGTTCCCTTCATGGATT | + |
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Preference number: 4 (lower is better) Translates to: AFACTLECCMKAVCRDFEGHLHL*QFPSWI Trigger: AATCCATGAAGGGAACTGGCACAGATGAAGATGCCC...CTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR CCA 90 bp | GCATTTGCTTGCACTTTAGAGTGCTGCATGAAAGCAGTGTGCAGAGATTTTGAGCGACGGGCTAAAGCCTaGATAATCTTTTATGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AFACTLECCMKAVCRDFERRAKA*IIFYGS Trigger: GGAACCATAAAAGATTATCCAGGCTTTAGCCCGTCG...CTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR CCA 90 bp | GATCTGAGCCAACCAAGGCATTTTGTTGTGGTTAGATCGCCACATATGCTTCTGTCTGCCTGCTTGACCTaGTTGTTAGGATTTCAATCA | + |
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Preference number: 4 (lower is better) Translates to: DLSQPRHFVVVRSPHMLLSACLT*LLGFQS Trigger: TGATTGAAATCCTAACAACCAGGTCAAGCAGGCAGA...CAGAAGCATATGTGGCGATCTAACCACAACAAAATGCCTTGGTTGGCTCAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR GCA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAAAGAGCCACCATGACGTaGTCGAAGTGGCCAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQRATMT*SKWPER Trigger: TCTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCT...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR GCA 90 bp | GCATTTGCTTGCACTTTAGAGTGCTGCATGAAAGCAGTGTGCAGAGATTTTGAGATGGATTTCTTCAGTTaGTTCGCATCAAACAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AFACTLECCMKAVCRDFEMDFFS*FASNRA Trigger: AGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCAT...CTCAAAATCTCTGCACACTGCTTTCATGCAGCACTCTAAAGTGCAAGCAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
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| CDS-3UTR GCA 90 bp | TCACTTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTGGGTCAAACCTTACATCTaGCAGAGTCAGCAGAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLPRYWGQSPETDHLFSWVKPYI*QSQQSF Trigger: AAAGCTCTGCTGACTCTGGCAGATGTAAGGTTTGAC...CCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
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| CDS-3UTR GCA 90 bp | GATCACTTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTTTTCCTTCATCTGCCTaGTTGACCTGGTTGTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DHFRGIGDKVLKQIIYFPFPSSA*LTWLLG Trigger: TCCTAACAACCAGGTCAAGCAGGCAGATGAAGGAAA...AGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS-3UTR CCA 90 bp | GATCACTTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTCTGGATAATCTTTTATaGTTCCTCGAGGTCCAACCC | + |
|
Preference number: 4 (lower is better) Translates to: DHFRGIGDKVLKQIIYFPLDNLL*FLEVQP Trigger: GGGTTGGACCTCGAGGAACCATAAAAGATTATCCAG...AGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGAGGTATTGGGGACAAAGTCCTGAAACAGATCATTTATTTTCCTGGCTTTTGCCAGTTCCCTTCATaGATTTCTTCAGTTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FRGIGDKVLKQIIYFPGFCQFPS*ISSVAS Trigger: CGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCA...AAAGCCAGGAAAATAAATGATCTGTTTCAGGACTTTGTCCCCAATACCTCGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTATCAGGCAGACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTGGATCAATCTCTGATCTaGAAACCATTATTCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSGRQVLSCICLHFRVLDQSLI*KPLFCS Trigger: TGAACAGAATAATGGTTTCCAGATCAGAGATTGATC...CAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAATGTCATGTGCATGAATCGTTTCACAGAAAGTGAAAAATCTCATGGTCTCCTGTTCATACGCTaGTTGGTACTGCTTGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: KANVMCMNRFTESEKSHGLLFIR*LVLLDN Trigger: ATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAG...ACCATGAGATTTTTCACTTTCTGTGAAACGATTCATGCACATGACATTTGCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS-3UTR GCA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAAATCTCTTCTACCATCTaGCAGAGTCAGCAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQISSTI*QSQQSF Trigger: AAAGCTCTGCTGACTCTGGCAGATGGTAGAAGAGAT...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR GCA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAAATTTGTCTTCGTCTGTaGCCCATTTGTTCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQICLRL*PICSHQ Trigger: CTGGTGAGAACAAATGGGGCACAGACGAAGACAAAT...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR CCA 90 bp | TTTGAACTACACAGATTCCAACTTCCTAAGCCAAACAGAAAATCATTAGTAGGTTGCCAGTTCCCTTCATaGATTTCTTCAGTTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FELHRFQLPKPNRKSLVGCQFPS*ISSVAS Trigger: CGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCA...ACCTACTAATGATTTTCTGTTTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR CCA 90 bp | GAACTACACAGATTCCAACTTCCTAAGCCAAACAGAAAATCATTAGTAGGTCTTTCTGCCTGCTTGACCTaGTTGTTAGGATTTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ELHRFQLPKPNRKSLVGLSACLT*LLGFQS Trigger: TGATTGAAATCCTAACAACCAGGTCAAGCAGGCAGA...AAGACCTACTAATGATTTTCTGTTTGGCTTAGGAAGTTGGAATCTGTGTAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR GCA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAACTGATGAAGTCTTTCTaGCAAAAACGCTGGAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQLMKSF*QKRWSV Trigger: AACACTCCAGCGTTTTTGGCAGAAAGACTTCATCAG...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS GCA 90 bp | TCCTGTTCATACGCTGCTTGGTACTGCTTGACAATCAGCTGTCGCTaGGCGTTCGACCGCTCCGTCAGAATGTTGATGAGGGTTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SCSYAAWYCLTISCR*AFDRSVRMLMRVFS Trigger: CGAGAAAACCCTCATCAACATTCTGACGGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCTCTCTCCTCTCTCTCTCTGCTGCTTGGTACTGCTaGACAATCAGCTGTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVPYGGESLSLSLLSLSAAWYC*TISCRC Trigger: GCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGC...AGAGAGAGAGAGGAGAGAGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS TCA 90 bp | TCAAGTCATCTTTCAGCTCCTGTTCATACGCTGCTTGGTACTGCTTaGCAATCAGCTGTCGCTGCGCGTTCGACCGCTCCGTCAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SSHLSAPVHTLLGTA*QSAVAARSTAPSEC Trigger: ACATTCTGACGGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGATGACTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS GCA 90 bp | TTCGCATCAAACAGGGCTGGTGCAGTAACAAGAGCCACCATGACGTaGTCGAAGTGGCCAGAGAGATCACCCTTCAAGTCATCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FASNRAGAVTRATMT*SKWPERSPFKSSFS Trigger: GCTGAAAGATGACTTGAAGGGTGATCTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS GCA 90 bp | TCCCTTCATGGATTTCTTCAGTTGCTTCGCATCAAACAGGGCTGGTaGAGTAACAAGAGCCACCATGACGTGCTCGAAGTGGCCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLHGFLQLLRIKQGW*SNKSHHDVLEVARE Trigger: CTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CCA 90 bp | AACAGGGCTGGTGCAGTAACAAGAGCCACCATGACGTGCTCGAAGTaGCCAGAGAGATCACCCTTCAAGTCATCTTTCAGCTCCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NRAGAVTRATMTCSK*PERSPFKSSFSSCS Trigger: TGAACAGGAGCTGAAAGATGACTTGAAGGGTGATCTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CCA 90 bp | AGTTCCCTTCATGGATTTCTTCAGTTGCTTCGCATCAAACAGGGCTaGTGCAGTAACAAGAGCCACCATGACGTGCTCGAAGTGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLHGFLQLLRIKQG*CSNKSHHDVLEVAR Trigger: TCTGGCCACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CCA 90 bp | TCCAGCACCCTTCAAAGCCTGATGAAGTCTTTCTGCCAAAAACGCTaGAGTGTTCCTCGCACAATGAACTATGGCCAGCAGCAGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSTLQSLMKSFCQKR*SVPRTMNYGQQQVF Trigger: GAAGACCTGCTGCTGGCCATAGTTCATTGTGCGAGGAACACTCCAGCGTTTTTGGCAGAAAGACTTCATCAGGCTTTGAAGGGTGCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR CAA 90 bp | TGCCTATCAGGCAGACAGGTTCTGTCTTGCATTTGCTTGCACTTTAGAGTGCTGGCTGCTTGGTACTGCTaGACAATCAGCTGTCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSGRQVLSCICLHFRVLAAWYC*TISCRC Trigger: GCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGC...CAGCACTCTAAAGTGCAAGCAAATGCAAGACAGAACCTGTCTGCCTGATAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS GCA 90 bp | AGGGCATCTTCATCTGTGCCAGTTCCCTTCATGGATTTCTTCAGTTaGTTCGCATCAAACAGGGCTGGTGCAGTAACAAGAGCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: RASSSVPVPFMDFFS*FASNRAGAVTRATM Trigger: CATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCACAGATGAAGATGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTACCCTATGGAGGCGAATCACTCTCTCTCTCTCTCCTCTCTCTCTCTCATGGATTTCTTCAGTaGCTTCGCATCAAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVPYGGESLSLSLLSLSHGFLQ*LRIKQG Trigger: GCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATG...AGAGAGAGAGAGGAGAGAGAGAGAGAGTGATTCGCCTCCATAGGGTACTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198631.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGTGTGCAGAGATTTTGAGGCGGTCCACCATCAGGGCAGGCAGCCATTGAGATGTTCATCCACTTaGAGGCTTTCATCTCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: KAVCRDFEAVHHQGRQPLRCSST*RLSSLL Trigger: TAGAAGAGATGAAAGCCTCAAAGTGGATGAACATCT...CAATGGCTGCCTGCCCTGATGGTGGACCGCCTCAAAATCTCTGCACACTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS TCA 90 bp | ATGTTAGTTTCAGCTGCGGGAAGCTCCGTAGACACAAGACCTCGGTaGATTTGTCTTCGTCTGTGCCCCATTTGTTCTCACCAGCATTAT | + |
|
Preference number: 5 (lower is better) Translates to: MLVSAAGSSVDTRPR*ICLRLCPICSHQHY Trigger: ATAATGCTGGTGAGAACAAATGGGGCACAGACGAAGACAAATTCACCGAGGTCTTGTGTCTACGGAGCTTCCCGCAGCTGAAACTAACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS GCA 90 bp | TCTTATACACTGTATAATAGGCCTGCGAGATTTCCTTCATCTGCCTaGTTGACCTGGTTGTTAGGATTTCAATCAGGGCATCTTCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SYTLYNRPARFPSSA*LTWLLGFQSGHLHL Trigger: CAGATGAAGATGCCCTGATTGAAATCCTAACAACCAGGTCAAGCAGGCAGATGAAGGAAATCTCGCAGGCCTATTATACAGTGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS-3UTR CAA 90 bp | GAACTACACAGATTCCAACTTCCTAAGCCAAACAGAAAATCATTAGTAGGTCTTGCCTGCTTGACCTGGTaGTTAGGATTTCAATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELHRFQLPKPNRKSLVGLACLTW*LGFQSG Trigger: CCCTGATTGAAATCCTAACAACCAGGTCAAGCAGGC...AAGACCTACTAATGATTTTCTGTTTGGCTTAGGAAGTTGGAATCTGTGTAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS-3UTR CAA 90 bp | CCTGATTTATGTTTAATGGTTTTGAACTACACAGATTCCAACTTCCTAAGCCAACATGGATTTCTTCAGTaGCTTCGCATCAAACAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PDLCLMVLNYTDSNFLSQHGFLQ*LRIKQG Trigger: GCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATG...TTGGCTTAGGAAGTTGGAATCTGTGTAGTTCAAAACCATTAAACATAAATCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS GCA 72 bp | TACGCTGCTTGGTACTGCTTGACAATCAGCTGTCGCTaGGCGTTCGACCGCTCCGTCAGAATGTTGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: YAAWYCLTISCR*AFDRSVRMLMR Trigger: CCTCATCAACATTCTGACGGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS CAA 72 bp | TCTTTCAGCTCCTGTTCATACGCTGCTTGGTACTGCTaGACAATCAGCTGTCGCTGCGCGTTCGACCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSSCSYAAWYC*TISCRCAFDRS Trigger: GGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS GCA 72 bp | TCATCTTTCAGCTCCTGTTCATACGCTGCTTGGTACTaGTTGACAATCAGCTGTCGCTGCGCGTTCGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFSSCSYAAWY*LTISCRCAFDR Trigger: GCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS CAA 90 bp | TTGACAATCAGCTGTCGCTGCGCGTTCGACCGCTCCGTCAGAATGTaGATGAGGGTTTTCTCGTCAGTCCCAAGTCCTCTGATCGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTISCRCAFDRSVRM*MRVFSSVPSPLIAF Trigger: GAAAGCGATCAGAGGACTTGGGACTGACGAGAAAACCCTCATCAACATTCTGACGGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS CCA 72 bp | GGTGCAGTAACAAGAGCCACCATGACGTGCTCGAAGTaGCCAGAGAGATCACCCTTCAAGTCATCTTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAVTRATMTCSK*PERSPFKSSFS Trigger: GCTGAAAGATGACTTGAAGGGTGATCTCTCTGGCCACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CAA 72 bp | TGCGGGAAGCTCCGTAGACACAAGACCTCGGTGAATTaGTCTTCGTCTGTGCCCCATTTGTTCTCACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CGKLRRHKTSVN*SSSVPHLFSPA Trigger: TGCTGGTGAGAACAAATGGGGCACAGACGAAGACAAATTCACCGAGGTCTTGTGTCTACGGAGCTTCCCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS CAA 90 bp | TTCAAGTCATCTTTCAGCTCCTGTTCATACGCTGCTTGGTACTGCTaGACAATCAGCTGTCGCTGCGCGTTCGACCGCTCCGTCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: FKSSFSSCSYAAWYC*TISCRCAFDRSVRM Trigger: CATTCTGACGGAGCGGTCGAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGATGACTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS GCA 72 bp | GGATTTCTTCAGTTGCTTCGCATCAAACAGGGCTGGTaGAGTAACAAGAGCCACCATGACGTGCTCGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GFLQLLRIKQGW*SNKSHHDVLEV Trigger: CACTTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CAA 90 bp | CAGGGCATCTTCATCTGTGCCAGTTCCCTTCATGGATTTCTTCAGTaGCTTCGCATCAAACAGGGCTGGTGCAGTAACAAGAGCCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGIFICASSLHGFLQ*LRIKQGWCSNKSHH Trigger: ATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCACAGATGAAGATGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS CCA 72 bp | TTCAAGTCATCTTTCAGCTCCTGTTCATACGCTGCTTaGTACTGCTTGACAATCAGCTGTCGCTGCGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FKSSFSSCSYAA*YCLTISCRCAF Trigger: GAACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGATGACTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS CCA 72 bp | CATGGATTTCTTCAGTTGCTTCGCATCAAACAGGGCTaGTGCAGTAACAAGAGCCACCATGACGTGCTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: HGFLQLLRIKQG*CSNKSHHDVLE Trigger: TTCGAGCACGTCATGGTGGCTCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 |
||
| CDS CAA 72 bp | CTTCAAGTCATCTTTCAGCTCCTGTTCATACGCTGCTaGGTACTGCTTGACAATCAGCTGTCGCTGCGCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LQVIFQLLFIRC*VLLDNQLSLRV Trigger: AACGCGCAGCGACAGCTGATTGTCAAGCAGTACCAAGCAGCGTATGAACAGGAGCTGAAAGATGACTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000199330.5 |
||
| CDS GCA 72 bp | TGTTCCAGCACCCTTCAAAGCCTGATGAAGTCTTTCTaGCAAAAACGCTGGAGTGTTCCTCGCACAATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSSTLQSLMKSF*QKRWSVPRTMN Trigger: GTTCATTGTGCGAGGAACACTCCAGCGTTTTTGGCAGAAAGACTTCATCAGGCTTTGAAGGGTGCTGGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS CCA 72 bp | CAATCAGGGCATCTTCATCTGTGCCAGTTCCCTTCATaGATTTCTTCAGTTGCTTCGCATCAAACAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QSGHLHLCQFPS*ISSVASHQTGL Trigger: CAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCACAGATGAAGATGCCCTGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS CCA 72 bp | CTTCAAAGCCTGATGAAGTCTTTCTGCCAAAAACGCTaGAGTGTTCCTCGCACAATGAACTATGGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LQSLMKSFCQKR*SVPRTMNYGQQ Trigger: CTGCTGGCCATAGTTCATTGTGCGAGGAACACTCCAGCGTTTTTGGCAGAAAGACTTCATCAGGCTTTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS GCA 72 bp | TCATCTGTGCCAGTTCCCTTCATGGATTTCTTCAGTTaGTTCGCATCAAACAGGGCTGGTGCAGTAACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSVPVPFMDFFS*FASNRAGAVTR Trigger: TCTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCACAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS CAA 72 bp | TTCATCTGTGCCAGTTCCCTTCATGGATTTCTTCAGTaGCTTCGCATCAAACAGGGCTGGTGCAGTAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: FICASSLHGFLQ*LRIKQGWCSNK Trigger: CTTGTTACTGCACCAGCCCTGTTTGATGCGAAGCAACTGAAGAAATCCATGAAGGGAACTGGCACAGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS GCA 72 bp | CTGTATAATAGGCCTGCGAGATTTCCTTCATCTGCCTaGTTGACCTGGTTGTTAGGATTTCAATCAGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LYNRPARFPSSA*LTWLLGFQSGH Trigger: ATGCCCTGATTGAAATCCTAACAACCAGGTCAAGCAGGCAGATGAAGGAAATCTCGCAGGCCTATTATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
||
| CDS CCA 72 bp | CCAAAAACGCTGGAGTGTTCCTCGCACAATGAACTATaGCCAGCAGCAGGTCTTCAAAATGTCCAGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: PKTLECSSHNEL*PAAGLQNVQII Trigger: AATTATCTGGACATTTTGAAGACCTGCTGCTGGCCATAGTTCATTGTGCGAGGAACACTCCAGCGTTTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031447.12 |
||
| CDS CAA 72 bp | TATAATAGGCCTGCGAGATTTCCTTCATCTGCCTGCTaGACCTGGTTGTTAGGATTTCAATCAGGGCATCTT | + |
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Preference number: 6 (lower is better) Translates to: YNRPARFPSSAC*TWLLGFQSGHL Trigger: AAGATGCCCTGATTGAAATCCTAACAACCAGGTCAAGCAGGCAGATGAAGGAAATCTCGCAGGCCTATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031447.12 ENSMUST00000198631.2 ENSMUST00000200379.5 |
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