Pregenerated sensors for ANXA11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021866Ensembl transcript IDs: ENSMUST00000022416.15, ENSMUST00000112364.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTACGTTTCCTGGCCAATaGCAGCAGGGGGCACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRTFPGQ*QQGAQV Trigger: CACCTGTGCCCCCTGCTGGCATTGGCCAGGAAACGT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGGAACCCCAGCCCTCCTaGGCCCTTTCGGCACAATAT | + |
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Preference number: 2 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPEPQPS*ALSAQY Trigger: ATATTGTGCCGAAAGGGCCCAGGAGGGCTGGGGTTC...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGAGTCCTAGGCAAGGATaGGGAGCCCCTCTCACCCAT | + |
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Preference number: 2 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPSPRQG*GAPLTH Trigger: ATGGGTGAGAGGGGCTCCCCATCCTTGCCTAGGACT...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACAGGGAGATGCCCCCTaGGAACCCCAGCCCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKQGDAP*EPQPSW Trigger: CCAGGAGGGCTGGGGTTCTCAGGGGGCATCTCCCTG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGCCGAAGTGTGCTCTTTaGGACGTTTCCTGGCCAATG | + |
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Preference number: 2 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPPKCAL*DVSWPM Trigger: CATTGGCCAGGAAACGTCCCAAAGAGCACACTTCGG...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGGCAACAAGGAGTGAGTaGAGGAACCGGAGAGATAAA | + |
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Preference number: 2 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPATRSE*RNRRDK Trigger: TTTATCTCTCCGGTTCCTGCACTCACTCCTTGTTGC...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR CCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACTTTGGGACGTTTCCTaGCCAATGCCAGCAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKLWDVS*PMPAGG Trigger: GCCCCCTGCTGGCATTGGCCAGGAAACGTCCCAAAG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAACAAGCAACAAGGAGTaGGTGCAGGAACCGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKTSNKE*VQEPER Trigger: TCTCTCCGGTTCCTGCACTCACTCCTTGTTGCTTGT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR CCA 72 bp | ATAGGGAAACCGAAGTGTGCTCTTTGGGACGTTTCCTaGCCAATGCCAGCAGGGGGCACAGGTGAGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: IGKPKCALWDVS*PMPAGGTGEPL Trigger: CAGTGGCTCACCTGTGCCCCCTGCTGGCATTGGCCAGGAAACGTCCCAAAGAGCACACTTCGGTTTCCCTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR-3UTR CAA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGGACGGCGGCGGTAATTaGGGGTTATTAGATAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPDGGGN*GLLDRE Trigger: TTCCCTATCTAATAACCCCAAATTACCGCCGCCGTC...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| 3UTR GCA 72 bp | TTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATaGCATGTAGAGATCAGAGGCTGTGATTCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: FSFRLHLLLLGT*HVEIRGCDSAC Trigger: GCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | GGTACATGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGCCCAGGATAGGCCCCTaGGGGCTGCTGCCCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GTCHVEIRGCDSACPTTLPRIGP*GLLPSG Trigger: CCCACTGGGCAGCAGCCCCCAGGGGCCTATCCTGGG...CAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | TGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGACATCCCCTCGGTTTCCAAACTaGGCTGGTGGCACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CHVEIRGCDSACPTTLTSPRFPN*AGGTAG Trigger: CCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGG...GGATGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR TCA 90 bp | TGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGACATCCCCGCTGGAAGTGTCCTaGTGTGTCGCTTCGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: CHVEIRGCDSACPTTLTSPLEVS*CVASNG Trigger: GCCATTCGAAGCGACACATCAGGACACTTCCAGCGG...GGATGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR GCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGCCCCTGGGGGCTGCTaGCCAGTGGGTGGCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAAPGGC*PVGGIG Trigger: GCCTATGCCACCCACTGGGCAGCAGCCCCCAGGGGC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | ACATGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGACAAGGGGGTGGCATTGGTaGCTGCCCAGGATAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TCHVEIRGCDSACPTTLTRGWHW*LPRIGH Trigger: ATGACCTATCCTGGGCAGTCACCAATGCCACCCCCT...TGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR GCA 90 bp | CTATTGGGTACATGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCGCGGTTCTCCCCAGCTaGATACAGCTCCTGGACATC | + |
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Preference number: 4 (lower is better) Translates to: LLGTCHVEIRGCDSACPTAVLPS*IQLLDI Trigger: GATGTCCAGGAGCTGTATGCAGCTGGGGAGAACCGC...GGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGTACCCAATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGTGGGTGGCATAGGCTaGCCTGGCACAGGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAVGGIG*PGTGAP Trigger: AGGGGCCCCTGTGCCAGGCCAGCCTATGCCACCCAC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | CCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGTGGGTGGCATAGGCTaGCCTGGCACAGGGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PSMAAMLSLLFSSSLAAIVGGIG*PGTGAP Trigger: AGGGGCCCCTGTGCCAGGCCAGCCTATGCCACCCAC...AATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | CATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTAGTACCTGCCACCAGGTaGGCCCGGCTCCGGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: HGCNAFSSLFVFTCCYWVVPATR*ARLREH Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGGTAC...TACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR TCA 90 bp | GGTACATGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGAGCACAGGATGGCGTTaGACTTGGACTCGTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: GTCHVEIRGCDSACPTTLSTGWR*TWTRLF Trigger: GAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCT...CAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGCCACCAGGAGGGACTaGAGGATAGCCACCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAATRRD*RIATPR Trigger: CCTGGGGGTGGCTATCCTCCAGTCCCTCCTGGTGGC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | CCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTTGGCATAGGCTGGCCTaGCACAGGGGCCCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: PSMAAMLSLLFSSSLAAIWHRLA*HRGPWV Trigger: TACCCAGGGGCCCCTGTGCCAGGCCAGCCTATGCCA...AATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCCTGCTGCCCAGTGGGTaGCATAGGCTGGCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKALLPSG*HRLAWH Trigger: GTGCCAGGCCAGCCTATGCCACCCACTGGGCAGCAG...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | CTATTGGGTACATGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLGTCHVEIRGCDSACPTSSRFP*EREMRS Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...GGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCATGTACCCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | GGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATAGGCATCCCAGGAGGTaGGTTTCCTCCTGGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GCNAFSSLFVFTCCYWVHRHPRR*VSSWGR Trigger: CCGCCCCCAGGAGGAAACCCACCTCCTGGGATGCCT...ATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGGCATAGGCTGGCCTaGCACAGGGGCCCCTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPWHRLA*HRGPWV Trigger: TACCCAGGGGCCCCTGTGCCAGGCCAGCCTATGCCA...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | GCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCTGCTGCCCAGTGGGTaGCATAGGCTGGCCTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: AAMLSLLFSSSLAAIGYMLLPSG*HRLAWH Trigger: GTGCCAGGCCAGCCTATGCCACCCACTGGGCAGCAG...CATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR TCA 90 bp | GCTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTTCCCCAGGCAGTCGATaGTGGCCTGCTCATCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: ANAPSMAAMLSLLFSSSLSPGSR*WPAHPF Trigger: GAACGGATGAGCAGGCCATCATCGACTGCCTGGGGA...AAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR TCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCCGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGT | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKARCETP*CESGSG Trigger: ACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCG...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | CTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCCACCAGGGGGCTCTTaGGGAAGTGAAGGTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: LMLPAWLQCFLFSFRLHLPPGGS*GSEGPS Trigger: GGATGGACCTTCACTTCCTCAAGAGCCCCCTGGTGG...CAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR GCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGGGACCACCACCTGGTaGAGCTGGAGGGTAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRGTTTW*SWRVAT Trigger: GGTGGCTACCCTCCAGCTGCACCAGGTGGTGGTCCC...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR GCA 90 bp | ATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTGGGACCACCACCTGGTaGAGCTGGAGGGTAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: MLSLLFSSSLAAIGYMPCGTTTW*SWRVAT Trigger: GGTGGCTACCCTCCAGCTGCACCAGGTGGTGGTCCC...ACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR GCA 90 bp | GGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATCTTGGCACTGGCTGCTaGCCAGGGGGTGGCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: GCNAFSSLFVFTCCYWVHLGTGC*PGGGIG Trigger: ACCAATGCCACCCCCTGGGCAGCAGCCAGTGCCAAG...ATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCCCTCGGTTTCCAAACTaGGCTGGTGGCACAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAPRFPN*AGGTAG Trigger: CCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGG...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | CTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGATCGCTGACGCTGCTTGTTaGACCGGCTCCCCAGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LFSFRLHLLLLGTCHVEIADAAC*TGSPGS Trigger: ACTGCCTGGGGAGCCGGTCCAACAAGCAGCGTCAGC...GATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTAAAACTGCCACCAGGTaGGCCCGGCTCCGGGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRKTATR*ARLREH Trigger: GTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGTTTT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | CTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTAAGAGGTAGTCCTGGTTaGACTGCCCCGCATAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LPAWLQCFLFSFRLHLLLRGSPG*TAPHSW Trigger: CCAACTATGCGGGGCAGTTCAACCAGGACTACCTCT...TAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR TCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCCCCAGGCAGTCGATaGTGGCCTGCTCATCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPSPGSR*WPAHPF Trigger: GAACGGATGAGCAGGCCATCATCGACTGCCTGGGGA...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGATAGGAGGATCTGCTaGCGCTGCTTGTTGGACCGG | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKADRRIC*RCLLDR Trigger: CCGGTCCAACAAGCAGCGTCAGCAGATCCTCCTATC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR GCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCTTGGCACTGGCTGCTaGCCAGGGGGTGGCATTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRLGTGC*PGGGIG Trigger: ACCAATGCCACCCCCTGGGCAGCAGCCAGTGCCAAG...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR GCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGACAGCCAGCATGCCCTaGTCCAGGTCCCCAGACATC | + |
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Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPTASMP*SRSPDI Trigger: GATGTCTGGGGACCTGGAGCAGGGCATGCTGGCTGT...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | TCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATGTATCCTGGGTAACTTaGCACTGGCTGCTGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQHGCNAFSSLFVFTCCYVSWVT*HWLLPR Trigger: CCTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATAC...ATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCTCCAAACTGGGCTGGTaGCACAGCAGGGGTGATGGT | + |
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Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKASKLGW*HSRGDG Trigger: ACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGA...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR TCA 90 bp | CATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HGCNAFSSLFVFTCCYWVPERER*GAAGSV Trigger: GACACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...TACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCACTGCCCCGCATAGTTaGCTACGTTATCCAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKATAPHS*LRYPAR Trigger: TCGGGCTGGATAACGTAGCCAACTATGCGGGGCAGT...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACCCAGGATAGGCCCCTaGGGGCTGCTGCCCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKPRIGP*GLLPSG Trigger: CCCACTGGGCAGCAGCCCCCAGGGGCCTATCCTGGG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGATCTCCAAACTGGGCTGGTaGCACAGCAGGGGTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSFRLHLLLLGTCHVEISKLGW*HSRGDG Trigger: ACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGA...GATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | CTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGGTTTCCAAACTGGGCTaGTGGCACAGCAGGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LMLPAWLQCFLFSFRLHLVSKLG*WHSRGD Trigger: ATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAAC...CAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGAGATGAGGAGCCGCTaGAAGTGTCCTGATGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAEMRSR*KCPDVS Trigger: CGACACATCAGGACACTTCCAGCGGCTCCTCATCTC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | CTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGGAGATGAGGAGCCGCTaGAAGTGTCCTGATGTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LMLPAWLQCFLFSFRLHLEMRSR*KCPDVS Trigger: CGACACATCAGGACACTTCCAGCGGCTCCTCATCTC...CAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTTGGGTAGGCTGGATATaGAGGCATCCCAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRWVGWI*RHPRRW Trigger: CCACCTCCTGGGATGCCTTCATATCCAGCCTACCCA...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | ATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTGATAGGAGGATCTGCTaGCGCTGCTTGTTGGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLFSSSLAAIGYMPCDRRIC*RCLLDR Trigger: CCGGTCCAACAAGCAGCGTCAGCAGATCCTCCTATC...ACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCCTGAGAGAGAGAGATaGGGAGCCGCTGGAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRPERER*GAAGSV Trigger: GACACTTCCAGCGGCTCCTCATCTCTCTCTCTCAGG...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGCGGTTCTCCCCAGCTaGATACAGCTCCTGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRAVLPS*IQLLDI Trigger: GATGTCCAGGAGCTGTATGCAGCTGGGGAGAACCGC...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | GGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATACTGCCCCGCATAGTTaGCTACGTTATCCAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: GCNAFSSLFVFTCCYWVHTAPHS*LRYPAR Trigger: TCGGGCTGGATAACGTAGCCAACTATGCGGGGCAGT...ATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCAGGTGGGTTTCCTCCTaGGGGCGGATACATTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKARWVSS*GRIHSI Trigger: TATGGAATGTATCCGCCCCCAGGAGGAAACCCACCT...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATAGGTGGGTTTCCTCCTaGGGGCGGATACATTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: SQHGCNAFSSLFVFTCCYRWVSS*GRIHSI Trigger: TATGGAATGTATCCGCCCCCAGGAGGAAACCCACCT...ATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGTATCCTGGGTAACTTaGCACTGGCTGCTGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRVSWVT*HWLLPR Trigger: CCTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATAC...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCAGATCCCGAGTATCCTaGGTAACTTGGCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKARSRVS*VTWHWL Trigger: CAGCCAGTGCCAAGTTACCCAGGATACTCGGGATCT...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTAGAGGTAGTCCTGGTTaGACTGCCCCGCATAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRRGSPG*TAPHSW Trigger: CCAACTATGCGGGGCAGTTCAACCAGGACTACCTCT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGTTGGCTGCCATGCCTaGGAGGTAGTCCTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLLFSSSLAAIGYMPCRVGCHA*EVVLVE Trigger: TTCAACCAGGACTACCTCTCAGGCATGGCAGCCAAC...TCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGATATCGTGGTACAGTaGCTTGCCGTACATCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTNLMTHFHQTPQYRHKADIVVQ*LAVHPL Trigger: AAGCGGATGTACGGCAAGTCACTGTACCACGATATC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGATCACATGTTGGCTGCCATaGCTGAGAGGTAGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSFRLHLLLLGTCHVEITCWLP*LRGSPG Trigger: ACCAGGACTACCTCTCAGGCATGGCAGCCAACATGT...GATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAAGGCATCCCAGGAGGTaGGTTTCCTCCTGGGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKRHPRR*VSSWGR Trigger: CCGCCCCCAGGAGGAAACCCACCTCCTGGGATGCCT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGTTTCCAAACTGGGCTaGTGGCACAGCAGGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRVSKLG*WHSRGD Trigger: ATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAAC...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | GCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCAGCTGCATACAGCTCCTaGACATCTCTCTGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMLSLLFSSSLAAIGYMPAAYSS*TSLWTR Trigger: CCTTGTCCAGAGAGATGTCCAGGAGCTGTATGCAGC...TGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCATCCAGAAGCAGCAGTaGTGGTACCTCGGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQCFLFSFRLHLLLLGTCIQKQQ*WYLGFQ Trigger: TTGGAAACCGAGGTACCATCACTGCTGCTTCTGGAT...GCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTTCATCACGGTTTCCCTaGGAGAGAGAGATGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRSSRFP*EREMRS Trigger: GCTCCTCATCTCTCTCTCTCAGGGAAACCGTGATGA...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTACATCTCCCGGCAGATaGTCTTCTCAATGTCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRTSPGR*SSQCLG Trigger: GCCGAGACATTGAGAAGAGCATCTGCCGGGAGATGT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | GCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACAGATTTGGCACGTTaGCTCCTCCAAATGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWLQCFLFSFRLHLLLLGTDLAR*LLQMFQ Trigger: CTGGAACATTTGGAGGAGCCAACGTGCCAAATCTGT...ACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAAGATCCCGAGTATCCTaGGTAACTTGGCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLFSSSLAAIGYMPCRRSRVS*VTWHWL Trigger: CAGCCAGTGCCAAGTTACCCAGGATACTCGGGATCT...TCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAGCTGACGCTGCTTGTTaGACCGGCTCCCCAGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKADAAC*TGSPGS Trigger: ACTGCCTGGGGAGCCGGTCCAACAAGCAGCGTCAGC...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGACAGATTTGGCACGTTaGCTCCTCCAAATGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPTDLAR*LLQMFQ Trigger: CTGGAACATTTGGAGGAGCCAACGTGCCAAATCTGT...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTTCCTGGACATCTCTCTaGACAAGGGACATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRSWTSL*TRDMST Trigger: TGTGGACATGTCCCTTGTCCAGAGAGATGTCCAGGA...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS-3UTR CCA 90 bp | TTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGTCCTGGACATCTCTCTaGACAAGGGACATGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFRLHLLLLGTCHVESWTSL*TRDMST Trigger: TGTGGACATGTCCCTTGTCCAGAGAGATGTCCAGGA...CTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAAGGGGGTGGCATTGGTaGCTGCCCAGGATAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKRGWHW*LPRIGH Trigger: ATGACCTATCCTGGGCAGTCACCAATGCCACCCCCT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACCGCTGGAAGTGTCCTaGTGTGTCGCTTCGAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKPLEVS*CVASNG Trigger: GCCATTCGAAGCGACACATCAGGACACTTCCAGCGG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGACATGTCCACATTTGTaGTCTCATCACGGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPTCPHL*SHHGFP Trigger: AGGGAAACCGTGATGAGAGCACAAATGTGGACATGT...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | TCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATATACAATGTCCTGCCTaGTTTCATCTAACTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQHGCNAFSSLFVFTCCYIQCPA*FHLTDP Trigger: TGGGTCAGTTAGATGAAAGCAGGCAGGACATTGTAT...ATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| 3UTR CAA 72 bp | TGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTaGCTGCTATTGGGTACATGCCATGTAGAGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WLQCFLFSFRLH*LLLGTCHVEIR Trigger: TCTGATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAGTTGGCTGCCATGCCTaGGAGGTAGTCCTGGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKVGCHA*EVVLVE Trigger: TTCAACCAGGACTACCTCTCAGGCATGGCAGCCAAC...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | ATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTACATGTCCACATTTGTaGTCTCATCACGGTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLSLLFSSSLAAIGYMPCTCPHL*SHHGFP Trigger: AGGGAAACCGTGATGAGAGCACAAATGTGGACATGT...ACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CCA 90 bp | CTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGTGTGTTCGTTACTTCTaGAAGCGAAGATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LMLPAWLQCFLFSFRLHLCVRYF*KRRSQS Trigger: TGATTGAGATCTTCGCTTCCAGAAGTAACGAACACA...CAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGCTGATTTTAGGTCTTTaGTCAAATCCTTGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPLILGL*SNPCHR Trigger: CCTATGGCAAGGATTTGATCAAAGACCTAAAATCAG...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAAGCACAGGATGGCGTTaGACTTGGACTCGTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKSTGWR*TWTRLF Trigger: GAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAACATGTTGGCTGCCATaGCTGAGAGGTAGTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKTCWLP*LRGSPG Trigger: ACCAGGACTACCTCTCAGGCATGGCAGCCAACATGT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACCGGTCCTTTGTTCCTaGTCCCCTCATAGCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKPVLCS*SPHSLV Trigger: AACAAGGCTATGAGGGGAGCAGGAACAAAGGACCGG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAGCTGCATACAGCTCCTaGACATCTCTCTGGACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKAAYSS*TSLWTR Trigger: CCTTGTCCAGAGAGATGTCCAGGAGCTGTATGCAGC...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAATCCAGAAGCAGCAGTaGTGGTACCTCGGTTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKIQKQQ*WYLGFQ Trigger: TTGGAAACCGAGGTACCATCACTGCTGCTTCTGGAT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGACTGATTTTAGGTCTTTaGTCAAATCCTTGCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLLFSSSLAAIGYMPCRLILGL*SNPCHR Trigger: CCTATGGCAAGGATTTGATCAAAGACCTAAAATCAG...TCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACATCCGCTTATACTCTaGTCGGATATCCAGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKHPLIL*SDIQQV Trigger: GACCTGCTGGATATCCGAGCAGAGTATAAGCGGATG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTTGTGTTCGTTACTTCTaGAAGCGAAGATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRCVRYF*KRRSQS Trigger: TGATTGAGATCTTCGCTTCCAGAAGTAACGAACACA...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACGTGGTACAGTGACTTaGCGTACATCCGCTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKRGTVT*RTSAYT Trigger: AGTATAAGCGGATGTACGGCAAGTCACTGTACCACG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 90 bp | TACCTGCCACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTTaGACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YLPPGGPGSGSTGWR*TWTRLFPGGSPQLH Trigger: ATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS TCA 90 bp | AAACTGCCACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTTaGACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLPPGGPGSGSTGWR*TWTRLFPGGSPQLH Trigger: ATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 90 bp | GCAGGACCTCGGCATCTCGCAAGGGGTCAAATCCAGAAGCAGCAGTaGTGGTACCTCGGTTTCCAAACTGGGCTGGTGGCACAGCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGPRHLARGQIQKQQ*WYLGFQTGLVAQQG Trigger: CCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCTTCTGGATTTGACCCCTTGCGAGATGCCGAGGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS GCA 90 bp | AAGGCGGGGGTGTTCTTGAGGCATTTCACCACAGCCAGCATGCCCTaGTCCAGGTCCCCAGACATCTCCCGGCAGATGCTCTTCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KAGVFLRHFTTASMP*SRSPDISRQMLFSM Trigger: CATTGAGAAGAGCATCTGCCGGGAGATGTCTGGGGACCTGGAGCAGGGCATGCTGGCTGTGGTGAAATGCCTCAAGAACACCCCCGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGACATCCGCCCAGGATAGGTCATaGGAGGCTGCCCAGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVEIRGCDSACPTTLTSAQDRS*EAAQDR Trigger: CCTATCCTGGGCAGCCTCCAATGACCTATCCTGGGC...GGATGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | TGCCATGTAGAGATCAGAGGCTGTGATTCTGCCTGCCCGACCACTCTGACATCCAGTATCCTGGGTAACTaGGCACTGGCTGCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CHVEIRGCDSACPTTLTSSILGN*ALAAAQ Trigger: CTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATACT...GGATGTCAGAGTGGTCGGGCAGGCAGAATCACAGCCTCTGATCTCTACATGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS TCA 90 bp | TGTAGGCTTTTTCTCAATACAATGTCCTGCCTGCTTTCATCTAACTaGCCCAGGACTGTCGTACCTGCCACCAGGTGGGCCCGGCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CRLFLNTMSCLLSSN*PRTVVPATRWARLR Trigger: CCGGAGCCGGGCCCACCTGGTGGCAGGTACGACAGTCCTGGGTCAGTTAGATGAAAGCAGGCAGGACATTGTATTGAGAAAAAGCCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS CCA 90 bp | TCCAGAAGCAGCAGTGATGGTACCTCGGTTTCCAAACTGGGCTGGTaGCACAGCAGGGGTGATGGTACTAGATCCCGAGTATCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSSSDGTSVSKLGW*HSRGDGTRSRVSWV Trigger: TACCCAGGATACTCGGGATCTAGTACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCTTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CCA 90 bp | AAATCCAGAAGCAGCAGTGATGGTACCTCGGTTTCCAAACTGGGCTaGTGGCACAGCAGGGGTGATGGTACTAGATCCCGAGTATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSRSSSDGTSVSKLG*WHSRGDGTRSRVSW Trigger: CCAGGATACTCGGGATCTAGTACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCTTCTGGATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CCA 90 bp | GGGTCAAATCCAGAAGCAGCAGTGATGGTACCTCGGTTTCCAAACTaGGCTGGTGGCACAGCAGGGGTGATGGTACTAGATCCCGAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GSNPEAAVMVPRFPN*AGGTAGVMVLDPEY Trigger: ATACTCGGGATCTAGTACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCTTCTGGATTTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCGCCCAGGGGGTGGCATaGGTGACTGCCCAGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAAQGVA*VTAQDR Trigger: CCTATCCTGGGCAGTCACCAATGCCACCCCCTGGGC...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATGCCCAGGGGGTGGCATaGGTGACTGCCCAGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQHGCNAFSSLFVFTCCYAQGVA*VTAQDR Trigger: CCTATCCTGGGCAGTCACCAATGCCACCCCCTGGGC...ATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTAAAGCCCTTCATAGCCTaGCGCAGGACCTCGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LPAWLQCFLFSFRLHLLLKPFIA*RRTSAS Trigger: AGATGCCGAGGTCCTGCGCAAGGCTATGAAGGGCTT...TAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTCACAAGGCCAAGCCCTTCATAGCCTaGCGCAGGACCTCGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: KTNLMTHFHQTPQYRHKAKPFIA*RRTSAS Trigger: AGATGCCGAGGTCCTGCGCAAGGCTATGAAGGGCTT...GGCCTTGTGACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 90 bp | ATCCATTTCCTTGCCTTGTCCTTTAAGACACCACCAGGGGGCTCTTaGGGAAGTGAAGGTCCATCCAGAGCACATCAGGCAAATATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHFLALSFKTPPGGS*GSEGPSRAHQANIL Trigger: CAGGATATTTGCCTGATGTGCTCTGGATGGACCTTCACTTCCTCAAGAGCCCCCTGGTGGTGTCTTAAAGGACAAGGCAAGGAAATGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTGCCCAGGATAGGTCATaGGAGGCTGCCCAGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRAQDRS*EAAQDR Trigger: CCTATCCTGGGCAGCCTCCAATGACCTATCCTGGGC...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGAAGGCGGGGGTGTTCTaGAGGCATTTCACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPKAGVF*RHFTTA Trigger: GGCTGTGGTGAAATGCCTCAAGAACACCCCCGCCTT...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 90 bp | CTTTCGATAGTCTCCAGAAGTATCTCCCGTGATATCGTGGTACAGTaGCTTGCCGTACATCCGCTTATACTCTGCTCGGATATCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSIVSRSISRDIVVQ*LAVHPLILCSDIQQ Trigger: CTGCTGGATATCCGAGCAGAGTATAAGCGGATGTACGGCAAGTCACTGTACCACGATATCACGGGAGATACTTCTGGAGACTATCGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | CTAATGCTCCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGAATGTTCCAGACATGTaGGCTGCCATGCCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LMLPAWLQCFLFSFRLHLNVPDM*AAMPER Trigger: CCTCTCAGGCATGGCAGCCAACATGTCTGGAACATT...CAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGGAGCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTAGTATCCTGGGTAACTaGGCACTGGCTGCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRSILGN*ALAAAQ Trigger: CTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATACT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTAGGATGGCGTTGAACTaGGACTCGTCTGTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRRMALN*DSSVPR Trigger: CCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCT...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGAGGATGGCGTTGAACTaGGACTCGTCTGTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFRLHLLLLGTCHVERMALN*DSSVPR Trigger: CCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCT...CTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGGAGCACAGGATGGCGTaGAACTTGGACTCGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EFGKNKPHDTFSPDTTVPEHRMA*NLDSSV Trigger: AACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTC...CGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | CCCAGCATGGCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTTACAGATTTGGCACGTaGGCTCCTCCAAATGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSMAAMLSLLFSSSLAAIYRFGT*APPNVP Trigger: TGGAACATTTGGAGGAGCCAACGTGCCAAATCTGTA...AATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGCCATGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | GCTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGGGGACATGTCCACATTaGTGCTCTCATCACGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AAMLSLLFSSSLAAIGYMGTCPH*CSHHGF Trigger: GAAACCGTGATGAGAGCACAAATGTGGACATGTCCC...CATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGGAGCACAGGATGGCGTaGAACTTGGACTCGTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NAFSSLFVFTCCYWVHAMEHRMA*NLDSSV Trigger: AACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTC...CATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGCAAAAACAAACCTCATGACACATTTTCACCAGACACCACAGTACCGTTACAGATTTGGCACGTaGGCTCCTCCAAATGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLAKTNLMTHFHQTPQYRYRFGT*APPNVP Trigger: TGGAACATTTGGAGGAGCCAACGTGCCAAATCTGTA...ACGGTACTGTGGTGTCTGGTGAAAATGTGTCATGAGGTTTGTTTTTGCCAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | CTGCAATGCTTTCTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCATCCATTTCCTTGCCTaGTCCTTTAAGACACCACCA | + |
|
Preference number: 5 (lower is better) Translates to: LQCFLFSFRLHLLLLGTCIHFLA*SFKTPP Trigger: TGGTGGTGTCTTAAAGGACAAGGCAAGGAAATGGAT...GCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAGAAAGCATTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTCTTTTCGTCTTCACTTGCTGCTATTGGGTACATGCCATGTAGAGATCTGGCAATCCATTTCCTaGCCTTGTCCTTTAAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: LFSFRLHLLLLGTCHVEIWQSIS*PCPLRH Trigger: GTGTCTTAAAGGACAAGGCAAGGAAATGGATTGCCA...GATCTCTACATGGCATGTACCCAATAGCAGCAAGTGAAGACGAAAAGAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAACCCCAGGATACAGATTaGGCACGTTGGCTCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKPQDTD*ARWLLQ Trigger: TTGGAGGAGCCAACGTGCCAAATCTGTATCCTGGGG...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAAATGTTCCAGACATGTaGGCTGCCATGCCTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKNVPDM*AAMPER Trigger: CCTCTCAGGCATGGCAGCCAACATGTCTGGAACATT...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAAGGGACATGTCCACATTaGTGCTCTCATCACGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKGTCPH*CSHHGF Trigger: GAAACCGTGATGAGAGCACAAATGTGGACATGTCCC...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS-3UTR CAA 90 bp | TTATTTGGAAACAGCTTTTGGCTACAGACATTCAGGTTTAAGGCACATTACAAATCGTGGTACAGTGACTaGCCGTACATCCGCTTATAC | + |
|
Preference number: 5 (lower is better) Translates to: LFGNSFWLQTFRFKAHYKSWYSD*PYIRLY Trigger: GTATAAGCGGATGTACGGCAAGTCACTGTACCACGA...TTTGTAATGTGCCTTAAACCTGAATGTCTGTAGCCAAAAGCTGTTTCCAAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 72 bp | CCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTTaGACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGGPGSGSTGWR*TWTRLFPGGSP Trigger: GGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CAA 90 bp | GCCACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTTGAACTaGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTGCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ATRWARLREHRMALN*DSSVPRRFSPAAYS Trigger: GCTGTATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CAA 90 bp | GTACCTGCCACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTaGAACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VPATRWARLREHRMA*NLDSSVPRRFSPAA Trigger: TGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGGTAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
||
| CDS CAA 72 bp | TGGGCCCGGCTCCGGGAGCACAGGATGGCGTTGAACTaGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: WARLREHRMALN*DSSVPRRFSPA Trigger: AGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CAA 72 bp | ACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTaGAACTTGGACTCGTCTGTTCCCAGGCGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRWARLREHRMA*NLDSSVPRRFS Trigger: GGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CAA 90 bp | AAAACTGCCACCAGGTGGGCCCGGCTCCGGGAGCACAGGATGGCGTaGAACTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: KTATRWARLREHRMA*NLDSSVPRRFSPAA Trigger: TGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAGTTCAACGCCATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS GCA 72 bp | GTCTCGGCCCGTCATCCTCTGATACTCGTTGAAAACTaGCACCAGGTGGGCCCGGCTCCGGGAGCACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSARHPLILVEN*HQVGPAPGAQD Trigger: ATCCTGTGCTCCCGGAGCCGGGCCCACCTGGTGGCAGTTTTCAACGAGTATCAGAGGATGACGGGCCGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS TCA 72 bp | TCTCAATGTCTCGGCCCGTCATCCTCTGATACTCGTTaGAAACTGCCACCAGGTGGGCCCGGCTCCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQCLGPSSSDTR*KLPPGGPGSGS Trigger: GCTCCCGGAGCCGGGCCCACCTGGTGGCAGTTTTCAACGAGTATCAGAGGATGACGGGCCGAGACATTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
||
| CDS CCA 72 bp | CACAGCAGGGGTGATGGTACTAGATCCCGAGTATCCTaGGTAACTTGGCACTGGCTGCTGCCCAGGGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HSRGDGTRSRVS*VTWHWLLPRGW Trigger: CCACCCCCTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATACTCGGGATCTAGTACCATCACCCCTGCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
||
| CDS CAA 90 bp | AGTATCCTGGGTAACTTGGCACTGGCTGCTGCCCAGGGGGTGGCATaGGTGACTGCCCAGGATAGGTCATTGGAGGCTGCCCAGGATAGG | + |
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Preference number: 6 (lower is better) Translates to: SILGNLALAAAQGVA*VTAQDRSLEAAQDR Trigger: CCTATCCTGGGCAGCCTCCAATGACCTATCCTGGGCAGTCACCAATGCCACCCCCTGGGCAGCAGCCAGTGCCAAGTTACCCAGGATACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS GCA 72 bp | TGCCCTGCTCCAGGTCCCCAGACATCTCCCGGCAGATaGTCTTCTCAATGTCTCGGCCCGTCATCCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CPAPGPQTSPGR*SSQCLGPSSSD Trigger: ATCAGAGGATGACGGGCCGAGACATTGAGAAGAGCATCTGCCGGGAGATGTCTGGGGACCTGGAGCAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS GCA 72 bp | CTTGGACTCGTCTGTTCCCAGGCGGTTCTCCCCAGCTaGATACAGCTCCTGGACATCTCTCTGGACAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LGLVCSQAVLPS*IQLLDISLDKG Trigger: TCCCTTGTCCAGAGAGATGTCCAGGAGCTGTATGCAGCTGGGGAGAACCGCCTGGGAACAGACGAGTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS TCA 72 bp | CAGATGCTCTTCTCAATGTCTCGGCCCGTCATCCTCTaGTACTCGTTGAAAACTGCCACCAGGTGGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: QMLFSMSRPVIL*YSLKTATRWAR Trigger: CCGGGCCCACCTGGTGGCAGTTTTCAACGAGTATCAGAGGATGACGGGCCGAGACATTGAGAAGAGCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS TCA 72 bp | GGATATCCAGCAGGTCAAGCTCGCTGCGAGACACCATaGTGCGAATCAGGGTCCGGTCCTTTGTTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GYPAGQARCETP*CESGSGPLFLL Trigger: GAGCAGGAACAAAGGACCGGACCCTGATTCGCATCATGGTGTCTCGCAGCGAGCTTGACCTGCTGGATATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS CCA 72 bp | AGCAGCAGTGATGGTACCTCGGTTTCCAAACTGGGCTaGTGGCACAGCAGGGGTGATGGTACTAGATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SSSDGTSVSKLG*WHSRGDGTRSR Trigger: TCGGGATCTAGTACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS TCA 72 bp | ACATGTTGGCTGCCATGCCTGAGAGGTAGTCCTGGTTaGACTGCCCCGCATAGTTGGCTACGTTATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TCWLPCLRGSPG*TAPHSWLRYPA Trigger: GGCTGGATAACGTAGCCAACTATGCGGGGCAGTTCAACCAGGACTACCTCTCAGGCATGGCAGCCAACATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS CCA 72 bp | CCAGAAGCAGCAGTGATGGTACCTCGGTTTCCAAACTaGGCTGGTGGCACAGCAGGGGTGATGGTACTAGAT | + |
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Preference number: 6 (lower is better) Translates to: PEAAVMVPRFPN*AGGTAGVMVLD Trigger: ATCTAGTACCATCACCCCTGCTGTGCCACCAGCCCAGTTTGGAAACCGAGGTACCATCACTGCTGCTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS TCA 72 bp | CTGAGAGAGAGAGATGAGGAGCCGCTGGAAGTGTCCTaGTGTGTCGCTTCGAATGGCCTCCTCCAGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LRERDEEPLEVS*CVASNGLLQSF Trigger: AAAACTCTGGAGGAGGCCATTCGAAGCGACACATCAGGACACTTCCAGCGGCTCCTCATCTCTCTCTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022416.15 ENSMUST00000112364.8 |
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| CDS TCA 72 bp | CTTGCCTTGTCCTTTAAGACACCACCAGGGGGCTCTTaGGGAAGTGAAGGTCCATCCAGAGCACATCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LALSFKTPPGGS*GSEGPSRAHQA Trigger: TGCCTGATGTGCTCTGGATGGACCTTCACTTCCTCAAGAGCCCCCTGGTGGTGTCTTAAAGGACAAGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS TCA 72 bp | TTTCTCAATACAATGTCCTGCCTGCTTTCATCTAACTaGCCCAGGACTGTCGTACCTGCCACCAGGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: FLNTMSCLLSSN*PRTVVPATRWA Trigger: GGCCCACCTGGTGGCAGGTACGACAGTCCTGGGTCAGTTAGATGAAAGCAGGCAGGACATTGTATTGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112364.8 |
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| CDS TCA 72 bp | GTCTCCAGAAGTATCTCCCGTGATATCGTGGTACAGTaGCTTGCCGTACATCCGCTTATACTCTGCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: VSRSISRDIVVQ*LAVHPLILCSD Trigger: ATCCGAGCAGAGTATAAGCGGATGTACGGCAAGTCACTGTACCACGATATCACGGGAGATACTTCTGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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| CDS CAA 72 bp | CCAGAAGTATCTCCCGTGATATCGTGGTACAGTGACTaGCCGTACATCCGCTTATACTCTGCTCGGATATCC | + |
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Preference number: 6 (lower is better) Translates to: PEVSPVISWYSD*PYIRLYSARIS Trigger: GGATATCCGAGCAGAGTATAAGCGGATGTACGGCAAGTCACTGTACCACGATATCACGGGAGATACTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022416.15 |
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