Pregenerated sensors for ANXA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024659Ensembl transcript IDs: ENSMUST00000025561.8, ENSMUST00000171423.9, ENSMUST00000235280.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTCAATTTCCGAACGGGAGACCATAATCCTGATCAATGCCTTATaGCGAGTTCCGGCACCCTTTTCTAAAAGTGCATCAAATCCAACA | + |
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Preference number: 1 (lower is better) Translates to: MSISERETIILINAL*RVPAPFSKSASNPT Trigger: TGTTGGATTTGATGCACTTTTAGAAAAGGGTGCCGGAACTCGCCATAAGGCATTGATCAGGATTATGGTCTCCCGTTCGGAAATTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| 3UTR-3UTR CCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTGATCAATGCCTTATaGCGAGTTCCGGCACCCTTT | + |
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Preference number: 2 (lower is better) Translates to: IICKLLSQEWYQSDLLMGLINAL*RVPAPF Trigger: AAAGGGTGCCGGAACTCGCCATAAGGCATTGATCAG...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| 3UTR-3UTR CCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGTGGTTTCATCCAGGATaGCTTGGCAAAGAGAGATTC | + |
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Preference number: 2 (lower is better) Translates to: IICKLLSQEWYQSDLLMGWFHPG*LGKERF Trigger: GAATCTCTCTTTGCCAAGCCATCCTGGATGAAACCA...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| 3UTR-3UTR GCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTGTAATTAGACTTATCTaGCAAAGCAACTTTCCTACT | + |
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Preference number: 2 (lower is better) Translates to: NFFLRNGTKVTCLWGFIIVIRLI*QSNFPT Trigger: AGTAGGAAAGTTGCTTTGGCAGATAAGTCTAATTAC...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTAAAGTGACTTGCTTATaGGGCTTTATAATTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: NFFLRNGTKVTCLWGFIIKVTCL*GFIIWD Trigger: ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTT...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| 3UTR CCA 72 bp | TCCGAACGGGAGACCATAATCCTGATCAATGCCTTATaGCGAGTTCCGGCACCCTTTTCTAAAAGTGCATCA | + |
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Preference number: 3 (lower is better) Translates to: SERETIILINAL*RVPAPFSKSAS Trigger: TGATGCACTTTTAGAAAAGGGTGCCGGAACTCGCCATAAGGCATTGATCAGGATTATGGTCTCCCGTTCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| 3UTR GCA 72 bp | ACTTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATaGCATCGAAGGAAAACAGCTAAGAGACATTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TYLPKQLSYLSP*HRRKTAKRHSP Trigger: AGGAGAATGTCTCTTAGCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCAACACTCTGCGAAGATaGGGAAAGCTCCTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSNTLRR*GKLLLV Trigger: GACCAGCAGGAGCTTTCCTCATCTTCGCAGAGTGTT...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | TCAGAACCTTGCAGAATAGTTGGGATGTCTAGTTTCCACCACACAGAGCCACCAACCATGATAGCTTTGTaGAAGGCAGCAACATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SEPCRIVGMSSFHHTEPPTMIAL*KAATSE Trigger: CTCGGATGTTGCTGCCTTGCACAAAGCTATCATGGT...TGGTGGCTCTGTGTGGTGGAAACTAGACATCCCAACTATTCTGCAAGGTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR CCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCGACAACGGTCACCCTTaGCAAGAGCAAGCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSDNGHP*QEQARL Trigger: AAGCCTTGCTTGCTCTTGCCAAGGGTGACCGTTGTC...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATGTAGGGGCTCACTGCTaGCCCAGGACCACCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDVGAHC*PRTTFV Trigger: TACAAAGGTGGTCCTGGGTCAGCAGTGAGCCCCTAC...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | CAGGATGGCTTGGCAAAGAGAGATTCCATACTTCTTCTGGTAAAATACTTTGATGTAGGGGCTCACTGCTaGCCCAGGACCACCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: QDGLAKRDSILLLVKYFDVGAHC*PRTTFV Trigger: TACAAAGGTGGTCCTGGGTCAGCAGTGAGCCCCTAC...ATCAAAGTATTTTACCAGAAGAAGTATGGAATCTCTCTTTGCCAAGCCATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR TCA 90 bp | TCATTCATGTCAATTTCCGAACGGGAGACCATAATCCTGATCAATGCCTTATGGAACACTCTGCGAAGATaGGGAAAGCTCCTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SFMSISERETIILINALWNTLRR*GKLLLV Trigger: GACCAGCAGGAGCTTTCCTCATCTTCGCAGAGTGTT...CCATAAGGCATTGATCAGGATTATGGTCTCCCGTTCGGAAATTGACATGAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR GCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCCAAAGAAAGCTGGAGTaGTGGTGGCACACTTCACGA | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSQRKLE*WWHTSR Trigger: TCGTGAAGTGTGCCACCAGCACTCCAGCTTTCTTTG...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | TTAGACTTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAACTGATCAATGCCTTATaGCGAGTTCCGGCACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LDLSAKATFLLKPMPSKELINAL*RVPAPF Trigger: GAAGGGTGCCGGAACTCGCCATAAGGCATTGATCAG...TTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAAGTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTGTAGGGGCTCACTGCTaGCCCAGGACCACCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NFFLRNGTKVTCLWGFIIVGAHC*PRTTFV Trigger: TACAAAGGTGGTCCTGGGTCAGCAGTGAGCCCCTAC...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | GAACCTTGCAGAATAGTTGGGATGTCTAGTTTCCACCACACAGAGCCACCAGGATCATCTGCATCAAACTaGGCTGGAGTTTTTAGCATA | + |
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Preference number: 4 (lower is better) Translates to: EPCRIVGMSSFHHTEPPGSSASN*AGVFSI Trigger: TATGCTAAAAACTCCAGCTCAGTTTGATGCAGATGA...TCCTGGTGGCTCTGTGTGGTGGAAACTAGACATCCCAACTATTCTGCAAGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR GCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCACCATGATAGCTTTGTaGAAGGCAGCAACATCCGAG | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSTMIAL*KAATSE Trigger: CTCGGATGTTGCTGCCTTGCACAAAGCTATCATGGT...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | GCCATCGAAGGAAAACAGCTAAGAGACATTCTCCTCAGAACCTTGCAGAATAGTACCACGGAGTTCATCTaGATCAAACTGAGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: AIEGKQLRDILLRTLQNSTTEFI*IKLSWS Trigger: ACTCCAGCTCAGTTTGATGCAGATGAACTCCGTGGT...ACTATTCTGCAAGGTTCTGAGGAGAATGTCTCTTAGCTGTTTTCCTTCGATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | TATGGCGAGTTCCGGCACCCTTTTCTAAAAGTGCATCAAATCCAACAAGTATGTCAAAGAAAGCTGGAGTaGTGGTGGCACACTTCACGA | + |
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Preference number: 4 (lower is better) Translates to: YGEFRHPFLKVHQIQQVCQRKLE*WWHTSR Trigger: TCGTGAAGTGTGCCACCAGCACTCCAGCTTTCTTTG...ACATACTTGTTGGATTTGATGCACTTTTAGAAAAGGGTGCCGGAACTCGCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR GCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCCATAATCCTGATCAATaGCTTATGGCGAGTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSHNPDQ*LMASSG Trigger: GCCGGAACTCGCCATAAGGCATTGATCAGGATTATG...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | GATTTCATTCATGTCAATTTCCGAACGGGAGACCATAATCCTGATCAATGCCTTGACAACGGTCACCCTTaGCAAGAGCAAGCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DFIHVNFRTGDHNPDQCLDNGHP*QEQARL Trigger: AAGCCTTGCTTGCTCTTGCCAAGGGTGACCGTTGTC...AAGGCATTGATCAGGATTATGGTCTCCCGTTCGGAAATTGACATGAATGAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR TCA 90 bp | TTAGACTTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAGAAAACGGGCCTGCTTaGGGAATTCTGATACCATTG | + |
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Preference number: 4 (lower is better) Translates to: LDLSAKATFLLKPMPSKEENGPA*GILIPL Trigger: CAATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTC...TTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAAGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | TATGGCGAGTTCCGGCACCCTTTTCTAAAAGTGCATCAAATCCAACAAGTATGTGAAAACGGGCCTGCTTaGGGAATTCTGATACCATTG | + |
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Preference number: 4 (lower is better) Translates to: YGEFRHPFLKVHQIQQVCENGPA*GILIPL Trigger: CAATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTC...ACATACTTGTTGGATTTGATGCACTTTTAGAAAAGGGTGCCGGAACTCGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR TCA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACATCCGAGGATACATTaGAGGAAGGGTAGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKHPRIH*RKGRGS Trigger: TGAGCCCCTACCCTTCCTTCAATGTATCCTCGGATG...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | GCCATCGAAGGAAAACAGCTAAGAGACATTCTCCTCAGAACCTTGCAGAATAGTTCAAGAAAACGGGCCTaGTTGAGGAATTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: AIEGKQLRDILLRTLQNSSRKRA*LRNSDT Trigger: GGTATCAGAATTCCTCAAGCAGGCCCGTTTTCTTGA...ACTATTCTGCAAGGTTCTGAGGAGAATGTCTCTTAGCTGTTTTCCTTCGATGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCTCAAGAAAACGGGCCTaGTTGAGGAATTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSSRKRA*LRNSDT Trigger: GGTATCAGAATTCCTCAAGCAGGCCCGTTTTCTTGA...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | TTAGACTTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAACATAATCCTGATCAATaGCTTATGGCGAGTTCCGGC | + |
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Preference number: 4 (lower is better) Translates to: LDLSAKATFLLKPMPSKEHNPDQ*LMASSG Trigger: GCCGGAACTCGCCATAAGGCATTGATCAGGATTATG...TTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAAGTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAAGACAACGGTCACCCTTaGCAAGAGCAAGCAAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKDNGHP*QEQARL Trigger: AAGCCTTGCTTGCTCTTGCCAAGGGTGACCGTTGTC...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACTGATCAATGCCTTATaGCGAGTTCCGGCACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKLINAL*RVPAPF Trigger: GAAGGGTGCCGGAACTCGCCATAAGGCATTGATCAG...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCTGGTTTCATCCAGGATaGCTTGGCAAAGAGAGATTC | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSWFHPG*LGKERF Trigger: GAATCTCTCTTTGCCAAGCCATCCTGGATGAAACCA...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCATCCGAGGATACATTaGAGGAAGGGTAGGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGHPRIH*RKGRGS Trigger: TGAGCCCCTACCCTTCCTTCAATGTATCCTCGGATG...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTAACACTCTGCGAAGATaGGGAAAGCTCCTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: NFFLRNGTKVTCLWGFIINTLRR*GKLLLV Trigger: GACCAGCAGGAGCTTTCCTCATCTTCGCAGAGTGTT...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | TATGGCGAGTTCCGGCACCCTTTTCTAAAAGTGCATCAAATCCAACAAGTATGTTCAAGAAAACGGGCCTaGTTGAGGAATTCTGATACC | + |
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Preference number: 4 (lower is better) Translates to: YGEFRHPFLKVHQIQQVCSRKRA*LRNSDT Trigger: GGTATCAGAATTCCTCAAGCAGGCCCGTTTTCTTGA...ACATACTTGTTGGATTTGATGCACTTTTAGAAAAGGGTGCCGGAACTCGCCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR GCA 90 bp | GCCATCGAAGGAAAACAGCTAAGAGACATTCTCCTCAGAACCTTGCAGAATAGTAATTCTGAAACACTCTaGGAAGATGAGGAAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AIEGKQLRDILLRTLQNSNSETL*EDEESS Trigger: GGAGCTTTCCTCATCTTCGCAGAGTGTTTCAGAATT...ACTATTCTGCAAGGTTCTGAGGAGAATGTCTCTTAGCTGTTTTCCTTCGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTCGGCAAAGAAAGCTaGAGTGCTGGTGGCACACTT | + |
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Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGLGKES*SAGGTL Trigger: AAGTGTGCCACCAGCACTCCAGCTTTCTTTGCCGAG...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | AGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACATCTCGGCAAAGAAAGCTaGAGTGCTGGTGGCACACTT | + |
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Preference number: 4 (lower is better) Translates to: RNGTKVTCLWGFIIWDKHLGKES*SAGGTL Trigger: AAGTGTGCCACCAGCACTCCAGCTTTCTTTGCCGAG...ATGTTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAAGTCTCCAGATGTATCTaGAGTGATGTCTTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKVSRCI*SDVFGQ Trigger: CTGGCCAAAGACATCACTTCAGATACATCTGGAGAC...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTCAAAGAAAGCTGGAGTaGTGGTGGCACACTTCACGA | + |
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Preference number: 4 (lower is better) Translates to: NFFLRNGTKVTCLWGFIIQRKLE*WWHTSR Trigger: TCGTGAAGTGTGCCACCAGCACTCCAGCTTTCTTTG...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | TTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAACAGCTTTCATAGTCTCCTTTaGTTTCATCCAGGATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSAKATFLLKPMPSKENSFHSLL*FHPGWL Trigger: AAGCCATCCTGGATGAAACCAAAGGAGACTATGAAA...GCTGTTTTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGGAAAACGGGCCTGCTTaGGGAATTCTGATACCATTG | + |
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Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGENGPA*GILIPL Trigger: CAATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTC...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | TCATTCATGTCAATTTCCGAACGGGAGACCATAATCCTGATCAATGCCTTATGGACATATTCCTGTTCTTaGTTTTCAAGAAAACGGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFMSISERETIILINALWTYSCS*FSRKRA Trigger: GGCCCGTTTTCTTGAAAATCAAGAACAGGAATATGT...CCATAAGGCATTGATCAGGATTATGGTCTCCCGTTCGGAAATTGACATGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR TCA 90 bp | GCCATCGAAGGAAAACAGCTAAGAGACATTCTCCTCAGAACCTTGCAGAATAGTTTGTCAAAATCTCAATaGGAGTGTCTTCATCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: AIEGKQLRDILLRTLQNSLSKSQ*ECLHLF Trigger: GAACAGATGAAGACACTCTCATTGAGATTTTGACAA...ACTATTCTGCAAGGTTCTGAGGAGAATGTCTCTTAGCTGTTTTCCTTCGATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGGTCTCCAGATGTATCTaGAGTGATGTCTTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGVSRCI*SDVFGQ Trigger: CTGGCCAAAGACATCACTTCAGATACATCTGGAGAC...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGACCACGGAGTTCATCTaGATCAAACTGAGCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGTTEFI*IKLSWS Trigger: ACTCCAGCTCAGTTTGATGCAGATGAACTCCGTGGT...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTCATCCAGGATGGCTTaGCAAAGAGAGATTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDSSRMA*QREIPY Trigger: GTATGGAATCTCTCTTTGCCAAGCCATCCTGGATGA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTGGTTTCATCCAGGATaGCTTGGCAAAGAGAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDWFHPG*LGKERF Trigger: GAATCTCTCTTTGCCAAGCCATCCTGGATGAAACCA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTCATCCAGGATGGCTTaGCAAAGAGAGATTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: NFFLRNGTKVTCLWGFIISSRMA*QREIPY Trigger: GTATGGAATCTCTCTTTGCCAAGCCATCCTGGATGA...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAATCATCTGCATCAAACTaGGCTGGAGTTTTTAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKSSASN*AGVFSI Trigger: TATGCTAAAAACTCCAGCTCAGTTTGATGCAGATGA...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTCATCTGCATCAAACTaGGCTGGAGTTTTTAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDSSASN*AGVFSI Trigger: TATGCTAAAAACTCCAGCTCAGTTTGATGCAGATGA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGAATTCTGAAACACTCTaGGAAGATGAGGAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGNSETL*EDEESS Trigger: GGAGCTTTCCTCATCTTCGCAGAGTGTTTCAGAATT...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR GCA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTAATTCTGAAACACTCTaGGAAGATGAGGAAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFLRNGTKVTCLWGFIINSETL*EDEESS Trigger: GGAGCTTTCCTCATCTTCGCAGAGTGTTTCAGAATT...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | AGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACATACATATTCCTGTTCTTaGTTTTCAAGAAAACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RNGTKVTCLWGFIIWDKHTYSCS*FSRKRA Trigger: GGCCCGTTTTCTTGAAAATCAAGAACAGGAATATGT...ATGTTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CCA 90 bp | AGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACATTTTCATAGTCTCCTTTaGTTTCATCCAGGATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RNGTKVTCLWGFIIWDKHFHSLL*FHPGWL Trigger: AAGCCATCCTGGATGAAACCAAAGGAGACTATGAAA...ATGTTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR TCA 90 bp | GATGGCTTGGCAAAGAGAGATTCCATACTTCTTCTGGTAAAATACTTTGATTTCTTGTCAAAATCTCAATaGGAGTGTCTTCATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGLAKRDSILLLVKYFDFLSKSQ*ECLHLF Trigger: GAACAGATGAAGACACTCTCATTGAGATTTTGACAA...GAAATCAAAGTATTTTACCAGAAGAAGTATGGAATCTCTCTTTGCCAAGCCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR TCA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGTTGTCAAAATCTCAATaGGAGTGTCTTCATCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IICKLLSQEWYQSDLLMGLSKSQ*ECLHLF Trigger: GAACAGATGAAGACACTCTCATTGAGATTTTGACAA...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 90 bp | GGCTTTCCATTCTCCTGTAAGTACGCGGCCTTGATCTGCTGGCGCTaGGCATTGGTCCTCTTGGTAAGAATGTCAATGATGGTTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFPFSCKYAALICWR*ALVLLVRMSMMVAS Trigger: TGAAGCAACCATCATTGACATTCTTACCAAGAGGACCAATGCTCAGCGCCAGCAGATCAAGGCCGCGTACTTACAGGAGAATGGAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 90 bp | GTTCCAAGTCCCTTCATGGCACCACGGAGTTCATCTGCATCAAACTaGGCTGGAGTTTTTAGCATAGCCAAAACAACCTCCTCCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPSPFMAPRSSSASN*AGVFSIAKTTSSRW Trigger: CCACCTGGAGGAGGTTGTTTTGGCTATGCTAAAAACTCCAGCTCAGTTTGATGCAGATGAACTCCGTGGTGCCATGAAGGGACTTGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 90 bp | ACACTCTGCGAAGATGAGGAAAGCTCCTGCTGGTCAGAATTGTGGTaGAGACGTTCACGTCTGTCCCCTTTCTCCTTTCTCCAGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLCEDEESSCWSELW*RRSRLSPFSFLQLH Trigger: ATGAAGCTGGAGAAAGGAGAAAGGGGACAGACGTGAACGTCTTCACCACAATTCTGACCAGCAGGAGCTTTCCTCATCTTCGCAGAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CCA 90 bp | CAGCCAAATCTTGATTCACACTCAAGTCCTGACAACGGTCACCCTTaGCAAGAGCAAGCAAGGCTTTCCGAAAGTCTCCAGATGTATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPNLDSHSSPDNGHP*QEQARLSESLQMYL Trigger: CAGATACATCTGGAGACTTTCGGAAAGCCTTGCTTGCTCTTGCCAAGGGTGACCGTTGTCAGGACTTGAGTGTGAATCAAGATTTGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 90 bp | CAAGAGCAAGCAAGGCTTTCCGAAAGTCTCCAGATGTATCTGAAGTaGTGTCTTTGGCCAGATCTCTTTTCAGCTCTTCTCTGTAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: QEQARLSESLQMYLK*CLWPDLFSALLCRL Trigger: GAGTCTACAGAGAAGAGCTGAAAAGAGATCTGGCCAAAGACATCACTTCAGATACATCTGGAGACTTTCGGAAAGCCTTGCTTGCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | TTAGACTTATCTGCCAAAGCAACTTTCCTACTTAAGCCCATGCCATCGAAGGAAAGAAAACGGGCCTGCTaGAGGAATTCTGATACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LDLSAKATFLLKPMPSKERKRAC*RNSDTI Trigger: AATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTCT...TTCCTTCGATGGCATGGGCTTAAGTAGGAAAGTTGCTTTGGCAGATAAGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | GATTTCATTCATGTCAATTTCCGAACGGGAGACCATAATCCTGATCAATGCCTTTCTGAAGTGATGTCTTaGGCCAGATCTCTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFIHVNFRTGDHNPDQCLSEVMS*ARSLFS Trigger: GCTGAAAAGAGATCTGGCCAAAGACATCACTTCAGA...AAGGCATTGATCAGGATTATGGTCTCCCGTTCGGAAATTGACATGAATGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171423.9 |
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| CDS-3UTR CAA 90 bp | CTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAAAGAAAACGGGCCTGCTaGAGGAATTCTGATACCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRNGTKVTCLWGFIIWDKRKRAC*RNSDTI Trigger: AATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTCT...TTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTTAACCATGATAGCTTaGTGCAAGGCAGCAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDLTMIA*CKAATS Trigger: GGATGTTGCTGCCTTGCACAAAGCTATCATGGTTAA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTCTGAAGTGATGTCTTaGGCCAGATCTCTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDSEVMS*ARSLFS Trigger: GCTGAAAAGAGATCTGGCCAAAGACATCACTTCAGA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGAGAAAACGGGCCTGCTaGAGGAATTCTGATACCATT | + |
|
Preference number: 5 (lower is better) Translates to: IICKLLSQEWYQSDLLMGRKRAC*RNSDTI Trigger: AATGGTATCAGAATTCCTCAAGCAGGCCCGTTTTCT...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | AGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATAAACATTTAACCATGATAGCTTaGTGCAAGGCAGCAACATCC | + |
|
Preference number: 5 (lower is better) Translates to: RNGTKVTCLWGFIIWDKHLTMIA*CKAATS Trigger: GGATGTTGCTGCCTTGCACAAAGCTATCATGGTTAA...ATGTTTATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGGGATTGTATCAGCCAAATCTaGATTCACACTCAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLRNGTKVTCLWGFIIWDCISQI*IHTQVL Trigger: CAGGACTTGAGTGTGAATCAAGATTTGGCTGATACA...ATCCCAAATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | ATTATATGTAAACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGTTCATCCAGGATGGCTaGGCAAAGAGAGATTCCATA | + |
|
Preference number: 5 (lower is better) Translates to: IICKLLSQEWYQSDLLMGFIQDG*AKRDSI Trigger: TATGGAATCTCTCTTTGCCAAGCCATCCTGGATGAA...CCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTTTACATATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025561.8 ENSMUST00000235280.2 |
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| CDS-3UTR CAA 90 bp | AACTTCTTTCTCAGGAATGGTACCAAAGTGACTTGCTTATGGGGCTTTATAATTTGTATCAGCCAAATCTaGATTCACACTCAAGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NFFLRNGTKVTCLWGFIICISQI*IHTQVL Trigger: CAGGACTTGAGTGTGAATCAAGATTTGGCTGATACA...AATTATAAAGCCCCATAAGCAAGTCACTTTGGTACCATTCCTGAGAAAGAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 72 bp | TTCTCCTGTAAGTACGCGGCCTTGATCTGCTGGCGCTaGGCATTGGTCCTCTTGGTAAGAATGTCAATGATG | + |
|
Preference number: 6 (lower is better) Translates to: FSCKYAALICWR*ALVLLVRMSMM Trigger: CATCATTGACATTCTTACCAAGAGGACCAATGCTCAGCGCCAGCAGATCAAGGCCGCGTACTTACAGGAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 72 bp | GAAGATGAGGAAAGCTCCTGCTGGTCAGAATTGTGGTaGAGACGTTCACGTCTGTCCCCTTTCTCCTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EDEESSCWSELW*RRSRLSPFSFL Trigger: GAGAAAGGAGAAAGGGGACAGACGTGAACGTCTTCACCACAATTCTGACCAGCAGGAGCTTTCCTCATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 90 bp | TTCTCCAGCTTCATACAAAGCCCTGGCATCTGTATCAGCCAAATCTaGATTCACACTCAAGTCCTGACAACGGTCACCCTTGGCAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSFIQSPGICISQI*IHTQVLTTVTLGKS Trigger: GCTCTTGCCAAGGGTGACCGTTGTCAGGACTTGAGTGTGAATCAAGATTTGGCTGATACAGATGCCAGGGCTTTGTATGAAGCTGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 72 bp | CCCTTCATGGCACCACGGAGTTCATCTGCATCAAACTaGGCTGGAGTTTTTAGCATAGCCAAAACAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PFMAPRSSSASN*AGVFSIAKTTS Trigger: GGAGGTTGTTTTGGCTATGCTAAAAACTCCAGCTCAGTTTGATGCAGATGAACTCCGTGGTGCCATGAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 72 bp | GCAAGGCTTTCCGAAAGTCTCCAGATGTATCTGAAGTaGTGTCTTTGGCCAGATCTCTTTTCAGCTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARLSESLQMYLK*CLWPDLFSALL Trigger: GAGAAGAGCTGAAAAGAGATCTGGCCAAAGACATCACTTCAGATACATCTGGAGACTTTCGGAAAGCCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS TCA 72 bp | AGCAAGCAAGGCTTTCCGAAAGTCTCCAGATGTATCTaGAGTGATGTCTTTGGCCAGATCTCTTTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKQGFPKVSRCI*SDVFGQISFQL Trigger: GAGCTGAAAAGAGATCTGGCCAAAGACATCACTTCAGATACATCTGGAGACTTTCGGAAAGCCTTGCTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 72 bp | TTCATACAAAGCCCTGGCATCTGTATCAGCCAAATCTaGATTCACACTCAAGTCCTGACAACGGTCACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FIQSPGICISQI*IHTQVLTTVTL Trigger: AAGGGTGACCGTTGTCAGGACTTGAGTGTGAATCAAGATTTGGCTGATACAGATGCCAGGGCTTTGTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS GCA 72 bp | CATGTTGACTGTACTTTCCGTAATTCTGAAACACTCTaGGAAGATGAGGAAAGCTCCTGCTGGTCAGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: HVDCTFRNSETL*EDEESSCWSEL Trigger: CAATTCTGACCAGCAGGAGCTTTCCTCATCTTCGCAGAGTGTTTCAGAATTACGGAAAGTACAGTCAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 72 bp | ATGGTTGCTTCATCCACACCTTTAACCATGATAGCTTaGTGCAAGGCAGCAACATCCGAGGATACATTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MVASSTPLTMIA*CKAATSEDTLK Trigger: CTTCAATGTATCCTCGGATGTTGCTGCCTTGCACAAAGCTATCATGGTTAAAGGTGTGGATGAAGCAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 90 bp | AATGTCACCCTTCAGTTCCAGATCCAGAGCTTTGTTCATGTCATGTaGACTGTACTTTCCGTAATTCTGAAACACTCTGCGAAGATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NVTLQFQIQSFVHVM*TVLSVILKHSAKMR Trigger: CCTCATCTTCGCAGAGTGTTTCAGAATTACGGAAAGTACAGTCAACATGACATGAACAAAGCTCTGGATCTGGAACTGAAGGGTGACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 72 bp | CTTCAGTTCCAGATCCAGAGCTTTGTTCATGTCATGTaGACTGTACTTTCCGTAATTCTGAAACACTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LQFQIQSFVHVM*TVLSVILKHSA Trigger: CGCAGAGTGTTTCAGAATTACGGAAAGTACAGTCAACATGACATGAACAAAGCTCTGGATCTGGAACTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
||
| CDS GCA 72 bp | AGCATTGGTCCTCTTGGTAAGAATGTCAATGATGGTTaGTTCATCCACACCTTTAACCATGATAGCTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SIGPLGKNVNDG*FIHTFNHDSFV Trigger: CACAAAGCTATCATGGTTAAAGGTGTGGATGAAGCAACCATCATTGACATTCTTACCAAGAGGACCAATGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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| CDS CAA 90 bp | ATCTCTTTTCAGCTCTTCTCTGTAGACTCTATTAATCTCTCTGATTaGTTCGTTAGATCTTGTTGTCAAAATCTCAATGAGAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISFQLFSVDSINLSD*FVRSCCQNLNESVF Trigger: GAAGACACTCTCATTGAGATTTTGACAACAAGATCTAACGAACAAATCAGAGAGATTAATAGAGTCTACAGAGAAGAGCTGAAAAGAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
||
| CDS CAA 72 bp | CAGCTCTTCTCTGTAGACTCTATTAATCTCTCTGATTaGTTCGTTAGATCTTGTTGTCAAAATCTCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLFSVDSINLSD*FVRSCCQNLNE Trigger: CTCATTGAGATTTTGACAACAAGATCTAACGAACAAATCAGAGAGATTAATAGAGTCTACAGAGAAGAGCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025561.8 ENSMUST00000171423.9 ENSMUST00000235280.2 |
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