Pregenerated sensors for ANTXRL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047441Ensembl transcript IDs: ENSMUST00000058725.5, ENSMUST00000226211.2, ENSMUST00000227979.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAATaGAAACCTGGAGCGTGCGGCGAAAAATTCAAATACACTTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FISSQNAFKIQESKK*KPGACGEKFKYTCL Trigger: AAGACAAGTGTATTTGAATTTTTCGCCGCACGCTCCAGGTTTCCATTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGACTACAATCTAAGACCTaGTACGTGTGTCCAATGCAA | + |
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Preference number: 2 (lower is better) Translates to: GCSTETFVEDPICRSLCRLQSKT*YVCPMQ Trigger: TTGCATTGGACACACGTAGCAGGTCTTAGATTGTAG...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR-3UTR GCA 90 bp | TGGTTAGTATTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGAGCTACGTGTGTCCAATaGAATAAACAAAAGCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: WLVFKDWEGLFHRDLCGRATCVQ*NKQKPL Trigger: AAGAGGCTTTTGTTTATTGCATTGGACACACGTAGC...TCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAATACTAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR CCA 72 bp | GCCTTTGCAGATAGACGAAGACAGACTGGTAGGAAGTaGGACCCAGGGAGCTTGGTCCCTGTACATACAACA | + |
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Preference number: 3 (lower is better) Translates to: AFADRRRQTGRK*DPGSLVPVHTT Trigger: TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCTTCGTCTATCTGCAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR CCA 72 bp | GAAGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTaGTCCCTGTACATACAACATGATCTTACCTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: EDRLVGSGTQGA*SLYIQHDLTSD Trigger: GTCTGAGGTAAGATCATGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR-3UTR CAA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGATGGGACCCAGGGAGCTaGGTCCCTGTACATACAACA | + |
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Preference number: 3 (lower is better) Translates to: VPQRPLWKILFVAAFADRWDPGS*VPVHTT Trigger: TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCA...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR TCA 72 bp | TCAGACTGTGAGCATCTCCCTAGGTGTGGGGCTTGCTaGTCAGCAGCAAACCAGAACTTTCTCTCTACAATC | + |
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Preference number: 3 (lower is better) Translates to: SDCEHLPRCGAC*SAANQNFLSTI Trigger: GATTGTAGAGAGAAAGTTCTGGTTTGCTGCTGATCAGCAAGCCCCACACCTAGGGAGATGCTCACAGTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGACCTGCATGCCTCTGTTaGCACAGCCACAGCAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GCSTETFVEDPICRSLCRPACLC*HSHSRQ Trigger: TTGCCTGCTGTGGCTGTGGCAACAGAGGCATGCAGG...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGAGTCACCAGCAAGACTaGCAGGAACATCAGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: DWEGLFHRDLCGRSYLSQSHQQD*QEHQPG Trigger: ACCTGGCTGATGTTCCTGCCAGTCTTGCTGGTGACT...CTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | TGGTTAGTATTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGACTCTGGCTCCTTCTCTaGCTTTGGGGGAGGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: WLVFKDWEGLFHRDLCGRLWLLL*LWGRWR Trigger: CCGCCACCTCCCCCAAAGCCAGAGAAGGAGCCAGAG...TCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAATACTAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | GACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGTGCAAAGCTTCCAGGTaGAGCACAGCAAGAGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: DWEGLFHRDLCGRSYLSQCKASR*STARVE Trigger: CTCTACTCTTGCTGTGCTGCACCTGGAAGCTTTGCA...CTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | GCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATCCAGGTTTCCCTGCATaGCTCTGTTGCCACAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AVPQRPLWKILFVAAFADPGFPA*LCCHSH Trigger: GTGGCTGTGGCAACAGAGGCATGCAGGGAAACCTGG...ATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | AGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTGGTCCCTGTACATACAACAGGGGTATGGTGGTTCTaGAAGGTGAAAACAATCCCG | + |
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Preference number: 4 (lower is better) Translates to: RQTGRKWDPGSLVPVHTTGVWWF*KVKTIP Trigger: CGGGATTGTTTTCACCTTGCAGAACCACCATACCCC...TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGAGTGCCGAACAAGGCATaGAGGGACTGTGGCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: GCSTETFVEDPICRSLCRVPNKA*RDCGSS Trigger: TGATGAGCCACAGTCCCTCCATGCCTTGTTCGGCAC...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GTGTGGGGCTTGCTGATCAGCAGCAAACCAGAACTTTCTCTCTACAATCTAAGATGTGTTGGCAGGCAATaGGGCTGGAGGAGGACGAGC | + |
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Preference number: 4 (lower is better) Translates to: VWGLLISSKPELSLYNLRCVGRQ*GWRRTS Trigger: GCTCGTCCTCCTCCAGCCCCATTGCCTGCCAACACA...TCTTAGATTGTAGAGAGAAAGTTCTGGTTTGCTGCTGATCAGCAAGCCCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGAAAAGATTGCCGGGTATaGGGCGGGAGCAGAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VPQRPLWKILFVAAFADRKDCRV*GGSRGS Trigger: GCTGCCTCTGCTCCCGCCCCATACCCGGCAATCTTT...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | TGGTTAGTATTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGACCCTGCGCCTTGGGATaGCACCAAACCAATGGCATC | + |
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Preference number: 4 (lower is better) Translates to: WLVFKDWEGLFHRDLCGRPCALG*HQTNGI Trigger: GATGCCATTGGTTTGGTGTCATCCCAAGGCGCAGGG...TCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAATACTAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | GCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATGTGTCCAGGTTTCCCTaGATGCCTCTGTTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AVPQRPLWKILFVAAFADVSRFP*MPLLPQ Trigger: CTGTGGCAACAGAGGCATGCAGGGAAACCTGGACAC...ATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGACCTTTGCTCAGGCGGTaGAATAATTTCCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GCSTETFVEDPICRSLCRPLLRR*NNFQPG Trigger: TCCTGGCTGGAAATTATTCCACCGCCTGAGCAAAGG...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | AGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTGGTCCCTGTACATACAACAGAAAGACAATCCTTGTaGGGTATGGTGGTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: RQTGRKWDPGSLVPVHTTERQSL*GMVVLQ Trigger: TTGCAGAACCACCATACCCCACAAGGATTGTCTTTC...TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR CAA 72 bp | GGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTaGTCGCAGCCTTTGCAGATAGACGAAGACAGACTG | + |
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Preference number: 4 (lower is better) Translates to: GLFHRDLCGRSY*SQPLQIDEDRL Trigger: CAGTCTGTCTTCGTCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGATGCTGTGTCTGGCGTTaGTGGGAACTTCTGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPQRPLWKILFVAAFADRCCVWR*WELLKP Trigger: AGGCTTCAGAAGTTCCCACCAACGCCAGACACAGCA...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATGGTCCTTTAGAGATTaGGGGGAAAGGATAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GCSTETFVEDPICRSLCRWSFRD*GERIGV Trigger: CACACCTATCCTTTCCCCCCAATCTCTAAAGGACCA...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| 3UTR CAA 72 bp | AGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTaGCAGATAGACGAAGACAGACTGGTAGGAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RDLCGRSYLSQP*QIDEDRLVGSG Trigger: CCCACTTCCTACCAGTCTGTCTTCGTCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | TTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGCTCATTTGCTGTGTCTaGCGTTGGTGGGAACTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FKDWEGLFHRDLCGRSYLLICCV*RWWELL Trigger: CAGAAGTTCCCACCAACGCCAGACACAGCAAATGAG...CAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | TTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGCTTTCTGCATGTGTGTaGGTCCTTGAGGCACTATGT | + |
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Preference number: 4 (lower is better) Translates to: FKDWEGLFHRDLCGRSYLLSACV*VLEALC Trigger: ACATAGTGCCTCAAGGACTCACACACATGCAGAAAG...CAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | CTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATACCTTGTGGGGTATGGTaGTTCTGCAAGGTGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: LFHRDLCGRSYLSQPLQIPCGVW*FCKVKT Trigger: TGTTTTCACCTTGCAGAACCACCATACCCCACAAGG...TATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | TTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGATACCTGGCTTGGTATaGGGACTGTGGGGATTTGAA | + |
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Preference number: 4 (lower is better) Translates to: FKDWEGLFHRDLCGRSYLIPGLV*GLWGFE Trigger: TTCAAATCCCCACAGTCCCCATACCAAGCCAGGTAT...CAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | CTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGATTTCTTTACTGTCTaGGGTGAGTGGCAGGATAAC | + |
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Preference number: 4 (lower is better) Translates to: LFHRDLCGRSYLSQPLQIDFFTV*GEWQDN Trigger: GTTATCCTGCCACTCACCTCAGACAGTAAAGAAATC...TATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGAGCTCATTCATATCACTaGGACTTTCATCAACGACTT | + |
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Preference number: 4 (lower is better) Translates to: GCSTETFVEDPICRSLCRAHSYH*DFHQRL Trigger: AAGTCGTTGATGAAAGTCCCAGTGATATGAATGAGC...TCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGCTTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAACTCCTTCTCTGGCTTTaGGGGAGGTGGCGGCAGTTT | + |
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Preference number: 4 (lower is better) Translates to: RRGFISSQNAFKIQESKKLLLWL*GRWRQF Trigger: AAACTGCCGCCACCTCCCCCAAAGCCAGAGAAGGAG...TTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAAGCCTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGACAAACCCTCTGCAAATaGATAAATGTGGATCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: VPQRPLWKILFVAAFADRQTLCK*INVDPV Trigger: AACTGGATCCACATTTATTCATTTGCAGAGGGTTTG...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | GCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGTGTGTTTTATCTTTaGTCCAGGACAGGTTATACT | + |
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Preference number: 4 (lower is better) Translates to: AVPQRPLWKILFVAAFADSVFYL*SRTGYT Trigger: AGTATAACCTGTCCTGGACCAAAGATAAAACACACT...ATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | TCAAAATTCAAGAATCTAAGAAATGGAAACCTGGAGCGTGCGGCGAAAAATTCACTTTCTTGGTTGGTTTaGAAGCGGATCTTTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SKFKNLRNGNLERAAKNSLSWLV*KRIFGL Trigger: CAGCCCAAAGATCCGCTTTCAAACCAACCAAGAAAG...TGAATTTTTCGCCGCACGCTCCAGGTTTCCATTTCTTAGATTCTTGAATTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | TACAATCTAAGACCTGCTACGTGTGTCCAATGCAATAAACAAAAGCCTCTTAAAGGTGGTTCTGCAAGGTaGAAACAATCCCGATTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YNLRPATCVQCNKQKPLKGGSAR*KQSRLE Trigger: TTCCAATCGGGATTGTTTTCACCTTGCAGAACCACC...TTTAAGAGGCTTTTGTTTATTGCATTGGACACACGTAGCAGGTCTTAGATTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CCA 90 bp | AGAAGAGGCTTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAATTGGTATGGGGACTGTaGGGATTTGAAAGTGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: RRGFISSQNAFKIQESKKLVWGL*GFESVA Trigger: TGCTACACTTTCAAATCCCCACAGTCCCCATACCAA...TTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAAGCCTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR TCA 90 bp | AGAAGAGGCTTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAACGAGAAGGCTCTTATTaGTTTCTTTACTGTCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RRGFISSQNAFKIQESKKREGSY*FLYCLR Trigger: CCTCAGACAGTAAAGAAATCAATAAGAGCCTTCTCG...TTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAAGCCTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR GCA 90 bp | AGAAGAGGCTTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAAGGACAGGTTATACTGTaGTCATTCATATCACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RRGFISSQNAFKIQESKKGQVIL*SFISLG Trigger: TCCCAGTGATATGAATGAGCACAGTATAACCTGTCC...TTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAAGCCTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 90 bp | ATCCCGATTGGAACAAAGGCAGTGCTTTTGGCGGCAGGAGGCCTGTaGGCAGCTGGGTTTCATGACAGCGAAGCCGGGATAGCCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: IPIGTKAVLLAAGGL*AAGFHDSEAGIASL Trigger: CAGGGAGGCTATCCCGGCTTCGCTGTCATGAAACCCAGCTGCTCACAGGCCTCCTGCCGCCAAAAGCACTGCCTTTGTTCCAATCGGGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | AGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTGGTCCCTGTACATACAACAGCTCCTTCTCTGGCTTaGGGGGAGGTGGCGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RQTGRKWDPGSLVPVHTTAPSLA*GEVAAV Trigger: AACTGCCGCCACCTCCCCCAAAGCCAGAGAAGGAGC...TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 90 bp | CTGAAGCCTTTGCTCAGGCGGTGGAATAATTTCCAGCCAGGACCATaGTATCGGAGGCTCCCACCTGTGGTCTCTCCCTGTGATCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LKPLLRRWNNFQPGP*YRRLPPVVSPCDLS Trigger: GCTCAGATCACAGGGAGAGACCACAGGTGGGAGCCTCCGATACCATGGTCCTGGCTGGAAATTATTCCACCGCCTGAGCAAAGGCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226211.2 |
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| CDS-3UTR CAA 90 bp | GACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGACTTTCTTGGTTGGTTaGAAAGCGGATCTTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: DWEGLFHRDLCGRSYLSQTFLVG*KADLWA Trigger: AGCCCAAAGATCCGCTTTCAAACCAACCAAGAAAGT...CTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS GCA 90 bp | AACCCTCTGCAAATGAATAAATGTGGATCCAGTTGTCCGCCACACTaGCTGATTTGTCCAGGACGAGGTAGAGGTCGAAAATACCCTGAC | + |
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Preference number: 5 (lower is better) Translates to: NPLQMNKCGSSCPPH*LICPGRGRGRKYPD Trigger: GTCAGGGTATTTTCGACCTCTACCTCGTCCTGGACAAATCAGGCAGTGTGGCGGACAACTGGATCCACATTTATTCATTTGCAGAGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058725.5 ENSMUST00000226211.2 ENSMUST00000227979.2 |
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| CDS-3UTR CAA 90 bp | TGGTTAGTATTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGACACGTTTTGCCTCATTaGCTGTGTCTGGCGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: WLVFKDWEGLFHRDLCGRHVLPH*LCLALV Trigger: CACCAACGCCAGACACAGCAAATGAGGCAAAACGTG...TCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAATACTAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | AGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTGGTCCCTGTACATACAACATTCGGATCTGTTCGTTaGCCTTTCTTAGTCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RQTGRKWDPGSLVPVHTTFGSVR*PFLVLS Trigger: AGAAAGGACTAAGAAAGGCAAACGAACAGATCCGAA...TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | AGACAGACTGGTAGGAAGTGGGACCCAGGGAGCTTGGTCCCTGTACATACAACAATACTTCTCATTGGGTaGAAAGACAATCCTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: RQTGRKWDPGSLVPVHTTILLIG*KDNPCG Trigger: CCCACAAGGATTGTCTTTCAACCCAATGAGAAGTAT...TGTTGTATGTACAGGGACCAAGCTCCCTGGGTCCCACTTCCTACCAGTCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | TTTAAAGACTGGGAGGGGCTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGATCAGCCAGGTCCTCTaGAACACGATGCCTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: FKDWEGLFHRDLCGRSYLISQVL*NTMPCD Trigger: ATCACAAGGCATCGTGTTCAAGAGGACCTGGCTGAT...CAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAGCCCCTCCCAGTCTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | AGAAGAGGCTTTATTTCCTCCCAGAACGCATTCAAAATTCAAGAATCTAAGAAACCCTGCATGCCTCTGTaGCCACAGCCACAGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RRGFISSQNAFKIQESKKPCMPL*PQPQQA Trigger: TGCCTGCTGTGGCTGTGGCAACAGAGGCATGCAGGG...TTTCTTAGATTCTTGAATTTTGAATGCGTTCTGGGAGGAAATAAAGCCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | CTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGTGGTGAACACATCTTaGAGCACAGAGTCTGTGCAA | + |
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Preference number: 5 (lower is better) Translates to: LFHRDLCGRSYLSQPLQIVVNTS*STESVQ Trigger: TTGCACAGACTCTGTGCTCAAAGATGTGTTCACCAC...TATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | CTGTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATACTAGGACTCCAGCAGTaGGTACTGGTTATAATGAGT | + |
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Preference number: 5 (lower is better) Translates to: LFHRDLCGRSYLSQPLQILGLQQ*VLVIMS Trigger: ACTCATTATAACCAGTACCAACTGCTGGAGTCCTAG...TATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 90 bp | GAAATACTTCTCATTGGGTTGAAAGACAATCCTTGTGGGGTATGGTaGTTCTGCAAGGTGAAAACAATCCCGATTGGAACAAAGGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: EILLIGLKDNPCGVW*FCKVKTIPIGTKAV Trigger: CACTGCCTTTGTTCCAATCGGGATTGTTTTCACCTTGCAGAACCACCATACCCCACAAGGATTGTCTTTCAACCCAATGAGAAGTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | TCAAAATTCAAGAATCTAAGAAATGGAAACCTGGAGCGTGCGGCGAAAAATTCAACCCTGAGGCACGTTTaGCCTCATTTGCTGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: SKFKNLRNGNLERAAKNSTLRHV*PHLLCL Trigger: CAGACACAGCAAATGAGGCAAAACGTGCCTCAGGGT...TGAATTTTTCGCCGCACGCTCCAGGTTTCCATTTCTTAGATTCTTGAATTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGACAGTGTGTTTTATCTTaGGTCCAGGACAGGTTATAC | + |
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Preference number: 5 (lower is better) Translates to: VPQRPLWKILFVAAFADRQCVLS*VQDRLY Trigger: GTATAACCTGTCCTGGACCAAAGATAAAACACACTG...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS GCA 90 bp | TCCTCTCCAGTGTGTTTTATCTTTGGTCCAGGACAGGTTATACTGTaGTCATTCATATCACTGGGACTTTCATCAACGACTTTGGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSPVCFIFGPGQVIL*SFISLGLSSTTLES Trigger: TGACTCCAAAGTCGTTGATGAAAGTCCCAGTGATATGAATGAGCACAGTATAACCTGTCCTGGACCAAAGATAAAACACACTGGAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | GTTCCACAGAGACCTTTGTGGAAGATCCTATTTGTCGCAGCCTTTGCAGATAGACTGGTTATAATGAGTTaGTTCCCAATGAAGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: VPQRPLWKILFVAAFADRLVIMS*FPMKEM Trigger: CATCTCCTTCATTGGGAACAAACTCATTATAACCAG...TCTATCTGCAAAGGCTGCGACAAATAGGATCTTCCACAAAGGTCTCTGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 90 bp | TGTTCGTTTGCCTTTCTTAGTCCTTTCTGCATGTGTGTGAGTCCTTaGGGCACTATGTTCTTAAGCACGAGAAGGCTCTTATTGATTTCT | + |
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Preference number: 5 (lower is better) Translates to: CSFAFLSPFCMCVSP*GTMFLSTRRLLLIS Trigger: AGAAATCAATAAGAGCCTTCTCGTGCTTAAGAACATAGTGCCTCAAGGACTCACACACATGCAGAAAGGACTAAGAAAGGCAAACGAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 90 bp | GAGACTTTCTTGGTTGGTTTGAAAGCGGATCTTTGGGCTGTAGTGTaGCTGTGTGATGCTGAAATACTTCTCATTGGGTTGAAAGACAAT | + |
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Preference number: 5 (lower is better) Translates to: ETFLVGLKADLWAVV*LCDAEILLIGLKDN Trigger: ATTGTCTTTCAACCCAATGAGAAGTATTTCAGCATCACACAGTCACACTACAGCCCAAAGATCCGCTTTCAAACCAACCAAGAAAGTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | TTCAAGAATCTAAGAAATGGAAACCTGGAGCGTGCGGCGAAAAATTCAAATACAATTCTCCGGGCTTTTTaGGCCTCTTCCATAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: FKNLRNGNLERAAKNSNTILRAF*ASSIVS Trigger: TGACACTATGGAAGAGGCCAAAAAAGCCCGGAGAAT...TGTATTTGAATTTTTCGCCGCACGCTCCAGGTTTCCATTTCTTAGATTCTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS-3UTR CAA 90 bp | TCAAAATTCAAGAATCTAAGAAATGGAAACCTGGAGCGTGCGGCGAAAAATTCACATGTGTGTGAGTCCTaGAGGCACTATGTTCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: SKFKNLRNGNLERAAKNSHVCES*RHYVLK Trigger: CTTAAGAACATAGTGCCTCAAGGACTCACACACATG...TGAATTTTTCGCCGCACGCTCCAGGTTTCCATTTCTTAGATTCTTGAATTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | ATTGCCGGGTATGGGGCGGGAGCAGAGGCAGCATCCTaGCGGGAGACTTGGTATACCTGGCTTGGTATGGGG | + |
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Preference number: 6 (lower is better) Translates to: IAGYGAGAEAAS*RETWYTWLGMG Trigger: CCCCATACCAAGCCAGGTATACCAAGTCTCCCGCCAGGATGCTGCCTCTGCTCCCGCCCCATACCCGGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | GATCACAGTAGGGTTTGTGTTGGCAGGCAATGGGGCTaGAGGAGGACGAGCAGGAACAGGAGAACGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: DHSRVCVGRQWG*RRTSRNRRTSR Trigger: CCTGCTCGTTCTCCTGTTCCTGCTCGTCCTCCTCCAGCCCCATTGCCTGCCAACACAAACCCTACTGTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 90 bp | CCTGCGCCTTGGGATGACACCAAACCAATGGCATCGGGTGGCAGCTaGGGTGAAAGTAGTCACAGCATGTGTCCAGGTTTCCCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: PAPWDDTKPMASGGS*GESSHSMCPGFPAC Trigger: GCATGCAGGGAAACCTGGACACATGCTGTGACTACTTTCACCCAAGCTGCCACCCGATGCCATTGGTTTGGTGTCATCCCAAGGCGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 90 bp | CGGGAGCAGAGGCAGCATCCTGGCGGGAGACTTGGTATACCTGGCTaGGTATGGGGACTGTGGGGATTTGAAAGTGTAGCACTCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: REQRQHPGGRLGIPG*VWGLWGFESVALLI Trigger: AATCAGGAGTGCTACACTTTCAAATCCCCACAGTCCCCATACCAAGCCAGGTATACCAAGTCTCCCGCCAGGATGCTGCCTCTGCTCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS GCA 72 bp | GAAAGTAGTCACAGCATGTGTCCAGGTTTCCCTGCATaGCTCTGTTGCCACAGCCACAGCAGGCAACGATCA | + |
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Preference number: 6 (lower is better) Translates to: ESSHSMCPGFPA*LCCHSHSRQRS Trigger: TGATCGTTGCCTGCTGTGGCTGTGGCAACAGAGGCATGCAGGGAAACCTGGACACATGCTGTGACTACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | CGTTGGTGGGAACTTCTGAAGCCTTTGCTCAGGCGGTaGAATAATTTCCAGCCAGGACCATGGTATCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RWWELLKPLLRR*NNFQPGPWYRR Trigger: CCTCCGATACCATGGTCCTGGCTGGAAATTATTCCACCGCCTGAGCAAAGGCTTCAGAAGTTCCCACCAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058725.5 ENSMUST00000226211.2 |
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| CDS CCA 72 bp | GGCACGTTTTGCCTCATTTGCTGTGTCTGGCGTTGGTaGGAACTTCTGAAGCCTTTGCTCAGGCGGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GTFCLICCVWRW*ELLKPLLRRWN Trigger: ATTCCACCGCCTGAGCAAAGGCTTCAGAAGTTCCCACCAACGCCAGACACAGCAAATGAGGCAAAACGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058725.5 ENSMUST00000226211.2 |
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| CDS CCA 72 bp | CTCTTCCTCTGGCTCCTTCTCTGGCTTTGGGGGAGGTaGCGGCAGTTTCTTAGGCTTTATGCAAAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LFLWLLLWLWGR*RQFLRLYAKLP Trigger: TGGAAGCTTTGCATAAAGCCTAAGAAACTGCCGCCACCTCCCCCAAAGCCAGAGAAGGAGCCAGAGGAAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | CATCCTGGCGGGAGACTTGGTATACCTGGCTTGGTATaGGGACTGTGGGGATTTGAAAGTGTAGCACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPGGRLGIPGLV*GLWGFESVALL Trigger: CAGGAGTGCTACACTTTCAAATCCCCACAGTCCCCATACCAAGCCAGGTATACCAAGTCTCCCGCCAGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | GGTATGGTGGTTCTGCAAGGTGAAAACAATCCCGATTaGAACAAAGGCAGTGCTTTTGGCGGCAGGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GMVVLQGENNPD*NKGSAFGGRRP Trigger: AGGCCTCCTGCCGCCAAAAGCACTGCCTTTGTTCCAATCGGGATTGTTTTCACCTTGCAGAACCACCATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 72 bp | TGGGATGACACCAAACCAATGGCATCGGGTGGCAGCTaGGGTGAAAGTAGTCACAGCATGTGTCCAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: WDDTKPMASGGS*GESSHSMCPGF Trigger: GAAACCTGGACACATGCTGTGACTACTTTCACCCAAGCTGCCACCCGATGCCATTGGTTTGGTGTCATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 90 bp | GTCCTCTTGAACACGATGCCTTGTGATGCCCTAGGACTCCAGCAGTaGGTACTGGTTATAATGAGTTTGTTCCCAATGAAGGAGATGCCA | + |
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Preference number: 6 (lower is better) Translates to: VLLNTMPCDALGLQQ*VLVIMSLFPMKEMP Trigger: TGGCATCTCCTTCATTGGGAACAAACTCATTATAACCAGTACCAACTGCTGGAGTCCTAGGGCATCACAAGGCATCGTGTTCAAGAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS GCA 72 bp | CAAATGAATAAATGTGGATCCAGTTGTCCGCCACACTaGCTGATTTGTCCAGGACGAGGTAGAGGTCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: QMNKCGSSCPPH*LICPGRGRGRK Trigger: TTTTCGACCTCTACCTCGTCCTGGACAAATCAGGCAGTGTGGCGGACAACTGGATCCACATTTATTCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058725.5 ENSMUST00000226211.2 ENSMUST00000227979.2 |
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| CDS GCA 72 bp | GGGTTGAAAGACAATCCTTGTGGGGTATGGTGGTTCTaGAAGGTGAAAACAATCCCGATTGGAACAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: GLKDNPCGVWWF*KVKTIPIGTKA Trigger: TGCCTTTGTTCCAATCGGGATTGTTTTCACCTTGCAGAACCACCATACCCCACAAGGATTGTCTTTCAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 72 bp | AAGTGTAGCACTCCTGATTGGGTGGTGAACACATCTTaGAGCACAGAGTCTGTGCAACTGGGAGACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: KCSTPDWVVNTS*STESVQLGDFL Trigger: AAGAAAGTCTCCCAGTTGCACAGACTCTGTGCTCAAAGATGTGTTCACCACCCAATCAGGAGTGCTACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 72 bp | AGGGTTTGTGAATTTCTTCACCAAACCCTCTGCAAATaGATAAATGTGGATCCAGTTGTCCGCCACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: RVCEFLHQTLCK*INVDPVVRHTA Trigger: GGCAGTGTGGCGGACAACTGGATCCACATTTATTCATTTGCAGAGGGTTTGGTGAAGAAATTCACAAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058725.5 ENSMUST00000226211.2 |
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| CDS TCA 72 bp | GCCTTTCTTAGTCCTTTCTGCATGTGTGTGAGTCCTTaGGGCACTATGTTCTTAAGCACGAGAAGGCTCTTA | + |
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Preference number: 6 (lower is better) Translates to: AFLSPFCMCVSP*GTMFLSTRRLL Trigger: TAAGAGCCTTCTCGTGCTTAAGAACATAGTGCCTCAAGGACTCACACACATGCAGAAAGGACTAAGAAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 72 bp | AAGACAATCCTTGTGGGGTATGGTGGTTCTGCAAGGTaGAAACAATCCCGATTGGAACAAAGGCAGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: KTILVGYGGSAR*KQSRLEQRQCF Trigger: AAAGCACTGCCTTTGTTCCAATCGGGATTGTTTTCACCTTGCAGAACCACCATACCCCACAAGGATTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CCA 72 bp | CTCATTGGGTTGAAAGACAATCCTTGTGGGGTATGGTaGTTCTGCAAGGTGAAAACAATCCCGATTGGAACA | + |
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Preference number: 6 (lower is better) Translates to: LIGLKDNPCGVW*FCKVKTIPIGT Trigger: TGTTCCAATCGGGATTGTTTTCACCTTGCAGAACCACCATACCCCACAAGGATTGTCTTTCAACCCAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 72 bp | AACACGATGCCTTGTGATGCCCTAGGACTCCAGCAGTaGGTACTGGTTATAATGAGTTTGTTCCCAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: NTMPCDALGLQQ*VLVIMSLFPMK Trigger: CTTCATTGGGAACAAACTCATTATAACCAGTACCAACTGCTGGAGTCCTAGGGCATCACAAGGCATCGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 72 bp | TGTGACTGTGTGATGCTGAAATACTTCTCATTGGGTTaGAAGACAATCCTTGTGGGGTATGGTGGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CDCVMLKYFSLG*KTILVGYGGSA Trigger: TGCAGAACCACCATACCCCACAAGGATTGTCTTTCAACCCAATGAGAAGTATTTCAGCATCACACAGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 72 bp | TTGGTTGGTTTGAAAGCGGATCTTTGGGCTGTAGTGTaGCTGTGTGATGCTGAAATACTTCTCATTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LVGLKADLWAVV*LCDAEILLIGL Trigger: CAACCCAATGAGAAGTATTTCAGCATCACACAGTCACACTACAGCCCAAAGATCCGCTTTCAAACCAACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS TCA 72 bp | TTCCCAATGAAGGAGATGCCATTGTTCAGACTGACTTaGAGAGAAACGTCCTCTCCAGTGTGTTTTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: FPMKEMPLFRLT*RETSSPVCFIF Trigger: AAAGATAAAACACACTGGAGAGGACGTTTCTCTTCAAGTCAGTCTGAACAATGGCATCTCCTTCATTGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS GCA 72 bp | GTGTGTTTTATCTTTGGTCCAGGACAGGTTATACTGTaGTCATTCATATCACTGGGACTTTCATCAACGACT | + |
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Preference number: 6 (lower is better) Translates to: VCFIFGPGQVIL*SFISLGLSSTT Trigger: AGTCGTTGATGAAAGTCCCAGTGATATGAATGAGCACAGTATAACCTGTCCTGGACCAAAGATAAAACACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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| CDS CAA 72 bp | CTTGAAGAGAAACGTCCTCTCCAGTGTGTTTTATCTTaGGTCCAGGACAGGTTATACTGTGCTCATTCATAT | + |
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Preference number: 6 (lower is better) Translates to: LEEKRPLQCVLS*VQDRLYCAHSY Trigger: ATATGAATGAGCACAGTATAACCTGTCCTGGACCAAAGATAAAACACACTGGAGAGGACGTTTCTCTTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058725.5 |
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