Pregenerated sensors for ANTXR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029338Ensembl transcript IDs: ENSMUST00000031281.14, ENSMUST00000199088.2
Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATCTACCAGGCTGGGGACAACGTCTCAAATCACAAGTCCTTATaGTGCGCTCCAGGTCTTTGGTTGGAGGCGGTCTTCCTGTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: GIYQAGDNVSNHKSL*CAPGLWLEAVFLLN Trigger: ATTCAACAGGAAGACCGCCTCCAACCAAAGACCTGGAGCGCAGCATAAGGACTTGTGATTTGAGACGTTGTCCCCAGCCTGGTAGATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | AGCATGCAAACTAACATTCCTCGGGATTTTCAGTGTCGTGAATCATaGGCTATCGCCGATGACTTTCATCACCTCTCATGTCGATGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SMQTNIPRDFQCRES*AIADDFHHLSCRWQ Trigger: CTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTCACGACACTGAAAATCCCGAGGAATGTTAGTTTGCATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR GCA 90 bp | GCAGAATCACCAGTCTCCATTGCAAACCTCTGTGGCTGGTGGATTTaGAGTCCTAGCTTTGGTATCATTACATCATCGATGTGTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AESPVSIANLCGWWI*SPSFGIITSSMCLL Trigger: AAGCAGACACATCGATGATGTAATGATACCAAAGCTAGGACTGCAAATCCACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | TTCCAGTCGAATATCCATTTCGCATCTGAAGTACAGTATCGAAAGTaGCTAGATTATCTGAGCTATTTCCTTCGGCTGCTGCCGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: FQSNIHFASEVQYRK*LDYLSYFLRLLPPS Trigger: GGAAGGCGGCAGCAGCCGAAGGAAATAGCTCAGATAATCTAGTCACTTTCGATACTGTACTTCAGATGCGAAATGGATATTCGACTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | TTCATGGCAGAATCACCAGTCTCCATTGCAAACCTCTGTGGCTGGTaGATTTGCAGTCCTAGCTTTGGTATCATTACATCATCGATGTGT | + |
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Preference number: 1 (lower is better) Translates to: FMAESPVSIANLCGW*ICSPSFGIITSSMC Trigger: ACACATCGATGATGTAATGATACCAAAGCTAGGACTGCAAATCCACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATTCTGCCATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | ACATTCATGGCAGAATCACCAGTCTCCATTGCAAACCTCTGTGGCTaGTGGATTTGCAGTCCTAGCTTTGGTATCATTACATCATCGATG | + |
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Preference number: 1 (lower is better) Translates to: TFMAESPVSIANLCG*WICSPSFGIITSSM Trigger: CATCGATGATGTAATGATACCAAAGCTAGGACTGCAAATCCACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATTCTGCCATGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | CCGTCCTTTGAAATTTCCATGAAGAGTACAATGCGGGCAATTATATaGGGATGCTCTAAATGGCTCTTTCCATCTCCTGCACTCACATGC | + |
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Preference number: 1 (lower is better) Translates to: PSFEISMKSTMRAII*GCSKWLFPSPALTC Trigger: GCATGTGAGTGCAGGAGATGGAAAGAGCCATTTAGAGCATCCTCATATAATTGCCCGCATTGTACTCTTCATGGAAATTTCAAAGGACGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | GCCGATGACTTTCATCACCTCTCATGTCGATGGCAGAACAAGTGTTaGAAAATGTTTAGTGCACAGAAAGCAGAAGGCAGAGGAAACATT | + |
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Preference number: 1 (lower is better) Translates to: ADDFHHLSCRWQNKC*KMFSAQKAEGRGNI Trigger: AATGTTTCCTCTGCCTTCTGCTTTCTGTGCACTAAACATTTTCCAACACTTGTTCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | GAATCATGGGCTATCGCCGATGACTTTCATCACCTCTCATGTCGATaGCAGAACAAGTGTTGGAAAATGTTTAGTGCACAGAAAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ESWAIADDFHHLSCR*QNKCWKMFSAQKAE Trigger: TTCTGCTTTCTGTGCACTAAACATTTTCCAACACTTGTTCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | CCTTATGCTGCGCTCCAGGTCTTTGGTTGGAGGCGGTCTTCCTGTTaGATTAACGCTCTATTAATTCTCTTGTCTCAAGTGCATAATAAA | + |
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Preference number: 1 (lower is better) Translates to: PYAALQVFGWRRSSC*INALLILLSQVHNK Trigger: TTTATTATGCACTTGAGACAAGAGAATTAATAGAGCGTTAATTCAACAGGAAGACCGCCTCCAACCAAAGACCTGGAGCGCAGCATAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | CAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTaGAGTACAGTATCGAAAGTGACTAGATTATCTGAGCTATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QARFVRFPVEYPFRI*STVSKVTRLSELFP Trigger: AGGAAATAGCTCAGATAATCTAGTCACTTTCGATACTGTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | GTGCCACAAACGTGGACACCAATGAAAAATATCACTGCCGTCCTTTaGAATTTCCATGAAGAGTACAATGCGGGCAATTATATGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: VPQTWTPMKNITAVL*NFHEEYNAGNYMRM Trigger: CATCCTCATATAATTGCCCGCATTGTACTCTTCATGGAAATTTCAAAGGACGGCAGTGATATTTTTCATTGGTGTCCACGTTTGTGGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR GCA 90 bp | CATCGATGTGTCTGCTTTGTCCTCTTACATAGTCAAAACGAGCTTTaGATAAACCCTAGCATGCAAACTAACATTCCTCGGGATTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: HRCVCFVLLHSQNEL*INPSMQTNIPRDFQ Trigger: CTGAAAATCCCGAGGAATGTTAGTTTGCATGCTAGGGTTTATGCAAAGCTCGTTTTGACTATGTAAGAGGACAAAGCAGACACATCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR GCA 90 bp | GCATCCAGTACCTTGAGGCGTCTCGTCTACATTTTGTCATGCGTGTaGACTTTCAGTGTAACAGTGACAAGATTTTCTAGTCAGAAATTT | + |
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Preference number: 1 (lower is better) Translates to: ASSTLRRLVYILSCV*TFSVTVTRFSSQKF Trigger: AAATTTCTGACTAGAAAATCTTGTCACTGTTACACTGAAAGTGCACACGCATGACAAAATGTAGACGAGACGCCTCAAGGTACTGGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | GTGGACACCAATGAAAAATATCACTGCCGTCCTTTGAAATTTCCATaGAGAGTACAATGCGGGCAATTATATGAGGATGCTCTAAATGGC | + |
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Preference number: 1 (lower is better) Translates to: VDTNEKYHCRPLKFP*RVQCGQLYEDALNG Trigger: GCCATTTAGAGCATCCTCATATAATTGCCCGCATTGTACTCTTCATGGAAATTTCAAAGGACGGCAGTGATATTTTTCATTGGTGTCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR TCA 90 bp | CTCCTGACTCACCCTCTTCATTTACAGCTCTTTGTTGTATTTTTATaGCACATCCTCCAGCCAGTGCAACAAATCTCAAGGAAGCTATTT | + |
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Preference number: 1 (lower is better) Translates to: LLTHPLHLQLFVVFL*HILQPVQQISRKLF Trigger: AAATAGCTTCCTTGAGATTTGTTGCACTGGCTGGAGGATGTGTCATAAAAATACAACAAAGAGCTGTAAATGAAGAGGGTGAGTCAGGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | CCCTCGTGGTGCAAACATGCTACAGGATTCTGTGAAAATTTGAAGTaGTTACCAAAGAAACATAGCCAGAGCTTCTGTAGTATTTTTGAT | + |
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Preference number: 1 (lower is better) Translates to: PSWCKHATGFCENLK*LPKKHSQSFCSIFD Trigger: ATCAAAAATACTACAGAAGCTCTGGCTATGTTTCTTTGGTAACCACTTCAAATTTTCACAGAATCCTGTAGCATGTTTGCACCACGAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR GCA 90 bp | CTATTTTGCCATTTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTaGAAACATGCTACAGGATTCTGTGAAAATTTGAAGTGGTTACCA | + |
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Preference number: 1 (lower is better) Translates to: LFCHLKAEVYLHPSW*KHATGFCENLKWLP Trigger: TGGTAACCACTTCAAATTTTCACAGAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAAATGGCAAAATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CCA 90 bp | AAGCTATTTTGCCATTTAAAGGCAGAGGTTTATTTACATCCCTCGTaGTGCAAACATGCTACAGGATTCTGTGAAAATTTGAAGTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: KLFCHLKAEVYLHPS*CKHATGFCENLKWL Trigger: TAACCACTTCAAATTTTCACAGAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAAATGGCAAAATAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | GCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTATGGGGAAAGCTCATaGCTCAAAATTCGCATCATT | + |
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Preference number: 2 (lower is better) Translates to: ASLARSKSLPLHATPKKSYGESS*LKIRII Trigger: AATGATGCGAATTTTGAGGCATGAGCTTTCCCCATA...GCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACTGTGGCTGGTGGATTTaGAGTCCTAGCTTTGGTATC | + |
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Preference number: 2 (lower is better) Translates to: AGALCQVSSRISISHLKYCGWWI*SPSFGI Trigger: GATACCAAAGCTAGGACTGCAAATCCACCAGCCACA...GTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | GCAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACTCATGCAAAGAGAGTTaGTGGCTTGTGACGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: AGALCQVSSRISISHLKYSCKES*WLVTLK Trigger: CTTCAGCGTCACAAGCCAGCAACTCTCTTTGCATGA...GTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGTTTCTTGTGTCCATCTaGCATCTTCTTCCAGTACAT | + |
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Preference number: 2 (lower is better) Translates to: KLGQEQKPSPSCHTQEELFLVSI*HLLPVH Trigger: ATGTACTGGAAGAAGATGCCAGATGGACACAAGAAA...CAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAAACATGCTACAGGATTCGTCTCTTTCCCAGGCTaGACCACAACCAAGGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LKAEVYLHPSWCKHATGFVSFPG*TTTKVW Trigger: CCACACCTTGGTTGTGGTTCAGCCTGGGAAAGAGAC...GAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGCATTGCAAACCTCTGTaGCTGGTGGATTTGCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVHCKPL*LVDLQS Trigger: GGACTGCAAATCCACCAGCCACAGAGGTTTGCAATG...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGACCACAACCAAGGTGTaGTGCTCCTCAATTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRTTTKV*CSSISK Trigger: CTTAGAAATTGAGGAGCACCACACCTTGGTTGTGGT...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGGTGCATAAGGCTTCTTaGAGCAGTGCCACAAACGTG | + |
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Preference number: 2 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVVHKAS*SSATNV Trigger: CACGTTTGTGGCACTGCTCCAAGAAGCCTTATGCAC...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGAAAATCTTCACAGGCTaGTGCTTGCTGTTGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRKIFTG*CLLLPL Trigger: TAAAGGCAACAGCAAGCAGCAGCCTGTGAAGATTTT...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAAACATGCTACAGGATTCGCTCTTTCCATCTCCTaGACTCACATGCCCGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LKAEVYLHPSWCKHATGFALSIS*THMPAK Trigger: TTTGGCGGGCATGTGAGTGCAGGAGATGGAAAGAGC...GAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 90 bp | CCACTGGTCATTGTCTATAACAGTTCACATCAAAGCAGGCGCGCTTaGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: PLVIVYNSSHQSRRA*SGFQSNIHFASEVQ Trigger: CTGTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGCTTTGATGTGAACTGTTATAGACAATGACCAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR TCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGAAAGGCTTTGCTATCTaGCATAGCTACAAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVKGFAI*HSYKAV Trigger: CACTGCCTTGTAGCTATGTCAGATAGCAAAGCCTTT...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGACGCTGAAGAGCCCTTaGAGACTTGAAGGAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVTLKSP*RLEGRK Trigger: TTTTCTTCCTTCAAGTCTCCAAGGGCTCTTCAGCGT...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGATCACCAGTCTCCATTaGAAACCTCTGTGGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LKYHEWVCACIRNEMPFGITSLH*KPLWLV Trigger: CACCAGCCACAGAGGTTTGCAATGGAGACTGGTGAT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGATCTTCACAGGCTGCTaGTTGCTGTTGCCTTTAATT | + |
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Preference number: 2 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVIFTGC*LLLPLI Trigger: AATTAAAGGCAACAGCAAGCAGCAGCCTGTGAAGAT...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAAACATGCTACAGGATTCTCTCCTGCACTCACATaGCCGCCAAACATGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: LKAEVYLHPSWCKHATGFSPALT*PPNMKC Trigger: ACATTTCATGTTTGGCGGGCATGTGAGTGCAGGAGA...GAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR GCA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCATACCAGCCTTCTATGTaGACACACAGATTATACCCG | + |
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Preference number: 2 (lower is better) Translates to: DSFVCTKEEISTDIVSRSYQPSM*THRLYP Trigger: CGGGTATAATCTGTGTGTGCACATAGAAGGCTGGTA...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 90 bp | AAAATCCTGCTTGCATCCAGTACCTTGAGGCGTCTCGTCTACATTTaGTCATGCGTGTGCACTTTCAGTGTAACAGTGACAAGATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KILLASSTLRRLVYI*SCVCTFSVTVTRFS Trigger: AGAAAATCTTGTCACTGTTACACTGAAAGTGCACACGCATGACAAAATGTAGACGAGACGCCTCAAGGTACTGGATGCAAGCAGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 90 bp | ATGACACATCCTCCAGCCAGTGCAACAAATCTCAAGGAAGCTATTTaGCCATTTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: MTHPPASATNLKEAI*PFKGRGLFTSLVVQ Trigger: TTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAAATGGCAAAATAGCTTCCTTGAGATTTGTTGCACTGGCTGGAGGATGTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 90 bp | GGGGAAGGCATCAGAGCTGCAACTCTTAGCACCAAATGTTTCTTCTaGGAGCACCAAATGCTTTACGGAAAACATTCCAAGTATCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: GEGIRAATLSTKCFF*EHQMLYGKHSKYLS Trigger: ACTTAGATACTTGGAATGTTTTCCGTAAAGCATTTGGTGCTCCAAGAAGAAACATTTGGTGCTAAGAGTTGCAGCTCTGATGCCTTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR TCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAAAAACGTGGACACCAATaGAAAATATCACTGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: THLFVQRRRSRLTSCPDQKRGHQ*KISLPS Trigger: GGACGGCAGTGATATTTTTCATTGGTGTCCACGTTT...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR TCA 90 bp | CAGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATCAGCTTCCAGAGTCTTaGGTCAGCATCTGCTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: QKTTQYTKHCTKYDQCVYQLPES*VSICFL Trigger: GAGAAAGCAGATGCTGACTCAAGACTCTGGAAGCTG...ATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATTTGATAAGCCTTTGTaGTCGCAGAGAGACATCCCA | + |
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Preference number: 2 (lower is better) Translates to: THLFVQRRRSRLTSCPDQFDKPL*SQRDIP Trigger: TGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 90 bp | GAAATTTCCTGTAAGGCACAAAGTAATGGAGGACTTGGAAAGGCTTaGCTATCTGACATAGCTACAAGGCAGTGGACTCCATTATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: EISCKAQSNGGLGKA*LSDIATRQWTPLSV Trigger: AACAGATAATGGAGTCCACTGCCTTGTAGCTATGTCAGATAGCAAAGCCTTTCCAAGTCCTCCATTACTTTGTGCCTTACAGGAAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTGCAAACCTCTGTGGCTaGTGGATTTGCAGTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: INLVHNFKGNGIPSVFEPANLCG*WICSPS Trigger: GCTAGGACTGCAAATCCACCAGCCACAGAGGTTTGC...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATCAGTATTCCAGCTGCTaGGGTTTCTTGTGTCCATCT | + |
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Preference number: 2 (lower is better) Translates to: QKTTQYTKHCTKYDQCVYQYSSC*GFLCPS Trigger: AGATGGACACAAGAAACCCCAGCAGCTGGAATACTG...ATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCTGGAAATCAGCATCATaGAGATACACTGTCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: HEPTASFNYTTDAPISLSWKSAS*RYTVTL Trigger: CAGTGTGACAGTGTATCTTCATGATGCTGATTTCCA...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR TCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGATAATTTGGCATCGTTaGCGTGACACGATGGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: LKYHEWVCACIRNEMPFGIIWHR*RDTMVI Trigger: TATCACCATCGTGTCACGTCAACGATGCCAAATTAT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR TCA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAGTACAGTATCGAAAGTaGCTAGATTATCTGAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: DSFVCTKEEISTDIVSRSVQYRK*LDYLSY Trigger: ATAGCTCAGATAATCTAGTCACTTTCGATACTGTAC...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR TCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATATCCATTTCGCATCTaGAGTACAGTATCGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: THLFVQRRRSRLTSCPDQYPFRI*STVSKV Trigger: CACTTTCGATACTGTACTTCAGATGCGAAATGGATA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR TCA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCATTCTCCCTTCCAAAGTaGTGGTTGTTGAACTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: DSFVCTKEEISTDIVSRSFSLPK*WLLNLF Trigger: AAATAAGTTCAACAACCATCACTTTGGAAGGGAGAA...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCTATTTACATCCCTCGTaGTGCAAACATGCTACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: HEPTASFNYTTDAPISLSYLHPS*CKHATG Trigger: TCCTGTAGCATGTTTGCACCACGAGGGATGTAAATA...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR GCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGAGTCAAAACGAGCTTTaGATAAACCCTAGCATGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LKYHEWVCACIRNEMPFGSQNEL*INPSMQ Trigger: TTGCATGCTAGGGTTTATGCAAAGCTCGTTTTGACT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR GCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCCATCATCGATGTGTCTaGTTTGTCCTCTTACATAGT | + |
|
Preference number: 2 (lower is better) Translates to: HEPTASFNYTTDAPISLSHHRCV*FVLLHS Trigger: ACTATGTAAGAGGACAAAGCAGACACATCGATGATG...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTCACCTCTCATGTCGATaGCAGAACAAGTGTTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: INLVHNFKGNGIPSVFEPHLSCR*QNKCWK Trigger: TTTCCAACACTTGTTCTGCCATCGACATGAGAGGTG...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR GCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTATTTTGTCATGCGTGTaGACTTTCAGTGTAACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: INLVHNFKGNGIPSVFEPILSCV*TFSVTV Trigger: CACTGTTACACTGAAAGTGCACACGCATGACAAAAT...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTTTAAAATATCACGAATaGGTGTGTGCCTGCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: INLVHNFKGNGIPSVFEPLKYHE*VCACIR Trigger: TCTGATGCAGGCACACACCCATTCGTGATATTTTAA...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCACTGCGCTCCAGGTCTTaGGTTGGAGGCGGTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DSFVCTKEEISTDIVSRSLRSRS*VGGGLP Trigger: AGGAAGACCGCCTCCAACCAAAGACCTGGAGCGCAG...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR GCA 72 bp | AAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTaGCCACTGCAGGTACTAATGAAGGGAGATCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: KSLPLHATPKKS*PLQVLMKGDLW Trigger: CCATAGATCTCCCTTCATTAGTACCTGCAGTGGGCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR GCA 72 bp | TGCTCTAAATGGCTCTTTCCATCTCCTGCACTCACATaGCCGCCAAACATGAAATGTTCGCCTTCTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CSKWLFPSPALT*PPNMKCSPSPF Trigger: GAAGGGAGAAGGCGAACATTTCATGTTTGGCGGGCATGTGAGTGCAGGAGATGGAAAGAGCCATTTAGAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGCGTCTCGTCTACATTTaGTCATGCGTGTGCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRRLVYI*SCVCTF Trigger: GAAAGTGCACACGCATGACAAAATGTAGACGAGACG...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GCCTCAAAATTCGCATCATTCCAGCTTCCAGAGTCTTaGGTCAGCATCTGCTTTCTCTGCCTGTGTATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASKFASFQLPES*VSICFLCLCIS Trigger: GCTGATACACAGGCAGAGAAAGCAGATGCTGACTCAAGACTCTGGAAGCTGGAATGATGCGAATTTTGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR GCA 72 bp | AGAGAAAATGGGCTGTTGTCCCAAGAACTTCTGAGATaGACCGGACTGTCGGTTCTGTTGGAAATCAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RENGLLSQELLR*TGLSVLLEISI Trigger: GATGCTGATTTCCAACAGAACCGACAGTCCGGTGCATCTCAGAAGTTCTTGGGACAACAGCCCATTTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CCA 72 bp | CTTTCTCTGCCTGTGTATCAGCCCCAAAGGCTAACATaGCTACAATCACTGAGCGTGTTTATTCCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLPVYQPQRLT*LQSLSVFIPGL Trigger: CAGACCTGGAATAAACACGCTCAGTGATTGTAGCCATGTTAGCCTTTGGGGCTGATACACAGGCAGAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACTTCACAGGCTGCTGCTaGCTGTTGCCTTTAATTATA | + |
|
Preference number: 3 (lower is better) Translates to: AGALCQVSSRISISHLKYFTGCC*LLPLII Trigger: TATAATTAAAGGCAACAGCAAGCAGCAGCCTGTGAA...GTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | ACTAAAGGGCAAAAATCCTGCTTGCATCCAGTACCTTaGGGCGTCTCGTCTACATTTTGTCATGCGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TKGQKSCLHPVP*GVSSTFCHACA Trigger: TGCACACGCATGACAAAATGTAGACGAGACGCCTCAAGGTACTGGATGCAAGCAGGATTTTTGCCCTTTAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GCGCTCCAGGTCTTTGGTTGGAGGCGGTCTTCCTGTTaGATTAACGCTCTATTAATTCTCTTGTCTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ALQVFGWRRSSC*INALLILLSQV Trigger: CACTTGAGACAAGAGAATTAATAGAGCGTTAATTCAACAGGAAGACCGCCTCCAACCAAAGACCTGGAGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CCA 72 bp | GCAGAATCACCAGTCTCCATTGCAAACCTCTGTGGCTaGTGGATTTGCAGTCCTAGCTTTGGTATCATTACA | + |
|
Preference number: 3 (lower is better) Translates to: AESPVSIANLCG*WICSPSFGIIT Trigger: TGTAATGATACCAAAGCTAGGACTGCAAATCCACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGATCGATGTGTCTGCTTaGTCCTCTTACATAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRIDVSA*SSYIVK Trigger: TTTGACTATGTAAGAGGACAAAGCAGACACATCGAT...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCCAAAGCAGGCGCGCTTaGTCAGGTTTCCAGTCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HEPTASFNYTTDAPISLSQSRRA*SGFQSN Trigger: ATTCGACTGGAAACCTGACAAAGCGCGCCTGCTTTG...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GCACCGGACTGTCGGTTCTGTTGGAAATCAGCATCATaGAGATACACTGTCACACTGTCTTCTTATCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: APDCRFCWKSAS*RYTVTLSSYLL Trigger: GAGAAGATAAGAAGACAGTGTGACAGTGTATCTTCATGATGCTGATTTCCAACAGAACCGACAGTCCGGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | ATATTAATGCTTTATGCACTGCTAAATCCCAAATGCTaGGAAAGGGGGATCTACCAGGCTGGGGACAACGTC | + |
|
Preference number: 3 (lower is better) Translates to: ILMLYALLNPKC*ERGIYQAGDNV Trigger: GACGTTGTCCCCAGCCTGGTAGATCCCCCTTTCTCAGCATTTGGGATTTAGCAGTGCATAAAGCATTAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GGCTTCTTGGAGCAGTGCCACAAACGTGGACACCAATaGAAAATATCACTGCCGTCCTTTGAAATTTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: GFLEQCHKRGHQ*KISLPSFEISM Trigger: CATGGAAATTTCAAAGGACGGCAGTGATATTTTTCATTGGTGTCCACGTTTGTGGCACTGCTCCAAGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GTACTAATGAAGGGAGATCTATGGAGATCTGCTGCCTaGCAGAAGACCACTCAGTACACTAAGCATTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: VLMKGDLWRSAA*QKTTQYTKHCT Trigger: TGTGCAATGCTTAGTGTACTGAGTGGTCTTCTGTCAGGCAGCAGATCTCCATAGATCTCCCTTCATTAGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR CCA 72 bp | GCTATCGCCGATGACTTTCATCACCTCTCATGTCGATaGCAGAACAAGTGTTGGAAAATGTTTAGTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: AIADDFHHLSCR*QNKCWKMFSAQ Trigger: CTGTGCACTAAACATTTTCCAACACTTGTTCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CCA 72 bp | ACTAACATTCCTCGGGATTTTCAGTGTCGTGAATCATaGGCTATCGCCGATGACTTTCATCACCTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TNIPRDFQCRES*AIADDFHHLSC Trigger: ACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTCACGACACTGAAAATCCCGAGGAATGTTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGAATCACCAGTCTCCATaGCAAACCTCTGTGGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LKYHEWVCACIRNEMPFGNHQSP*QTSVAG Trigger: ACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | AGACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTaGCATCGTGTCCAGATCAATCACACGGGAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: RLICLYKGGDLD*HRVQINHTGAI Trigger: AATAGCTCCCGTGTGATTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAAACATGCTACAGGATTCAGAGAAAATGGGCTGTaGTCCCAAGAACTTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKAEVYLHPSWCKHATGFRENGL*SQELLR Trigger: TCTCAGAAGTTCTTGGGACAACAGCCCATTTTCTCT...GAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTGCAAACATGCTACAGGATTCTCATTTGATAAGCCTTaGTGCTCGCAGAGAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: LKAEVYLHPSWCKHATGFSFDKP*CSQRDI Trigger: GATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGA...GAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | TCTTCATTTCAAGCTATTTACTGCAAACAGTTTCTTTaGCACCAGAGCAAGCTTGGCCAGGAGCAAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSFQAIYCKQFL*HQSKLGQEQKP Trigger: AGGCTTTTGCTCCTGGCCAAGCTTGCTCTGGTGTCAAAGAAACTGTTTGCAGTAAATAGCTTGAAATGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR GCA 72 bp | GTCTGCTTTGTCCTCTTACATAGTCAAAACGAGCTTTaGATAAACCCTAGCATGCAAACTAACATTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: VCFVLLHSQNEL*INPSMQTNIPR Trigger: CCGAGGAATGTTAGTTTGCATGCTAGGGTTTATGCAAAGCTCGTTTTGACTATGTAAGAGGACAAAGCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR GCA 72 bp | ACCTTGAGGCGTCTCGTCTACATTTTGTCATGCGTGTaGACTTTCAGTGTAACAGTGACAAGATTTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TLRRLVYILSCV*TFSVTVTRFSS Trigger: ACTAGAAAATCTTGTCACTGTTACACTGAAAGTGCACACGCATGACAAAATGTAGACGAGACGCCTCAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR GCA 72 bp | CTCCAGCCAGTGCAACAAATCTCAAGGAAGCTATTTTaGCATTTAAAGGCAGAGGTTTATTTACATCCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LQPVQQISRKLF*HLKAEVYLHPS Trigger: CGAGGGATGTAAATAAACCTCTGCCTTTAAATGGCAAAATAGCTTCCTTGAGATTTGTTGCACTGGCTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | GAAATTTCCATGAAGAGTACAATGCGGGCAATTATATaGGGATGCTCTAAATGGCTCTTTCCATCTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EISMKSTMRAII*GCSKWLFPSPA Trigger: TGCAGGAGATGGAAAGAGCCATTTAGAGCATCCTCATATAATTGCCCGCATTGTACTCTTCATGGAAATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | TGTCCAGATCAATCACACGGGAGCTATTGCTATGTATaGAAAGTGTCACATAAAGATTCGCAATGTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CPDQSHGSYCYV*KVSHKDSQCPL Trigger: CAGAGGACATTGCGAATCTTTATGTGACACTTTTCATACATAGCAATAGCTCCCGTGTGATTGATCTGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR GCA 72 bp | GTCCTAGCTTTGGTATCATTACATCATCGATGTGTCTaGTTTGTCCTCTTACATAGTCAAAACGAGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLALVSLHHRCV*FVLLHSQNELC Trigger: GCAAAGCTCGTTTTGACTATGTAAGAGGACAAAGCAGACACATCGATGATGTAATGATACCAAAGCTAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR-3UTR CAA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGAAAGTAATGGAGGACTaGGAAAGGCTTTGCTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKYHEWVCACIRNEMPFGKVMED*ERLCYL Trigger: CAGATAGCAAAGCCTTTCCAAGTCCTCCATTACTTT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | AATATCCATTTCGCATCTGAAGTACAGTATCGAAAGTaGCTAGATTATCTGAGCTATTTCCTTCGGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NIHFASEVQYRK*LDYLSYFLRLL Trigger: CAGCAGCCGAAGGAAATAGCTCAGATAATCTAGTCACTTTCGATACTGTACTTCAGATGCGAAATGGATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | ACGTGGACACCAATGAAAAATATCACTGCCGTCCTTTaGAATTTCCATGAAGAGTACAATGCGGGCAATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TWTPMKNITAVL*NFHEEYNAGNY Trigger: ATAATTGCCCGCATTGTACTCTTCATGGAAATTTCAAAGGACGGCAGTGATATTTTTCATTGGTGTCCACGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CCA 72 bp | TGCCATTTAAAGGCAGAGGTTTATTTACATCCCTCGTaGTGCAAACATGCTACAGGATTCTGTGAAAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: CHLKAEVYLHPS*CKHATGFCENL Trigger: CAAATTTTCACAGAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAAATGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | TTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTaGAGTACAGTATCGAAAGTGACTAGATTATCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: FVRFPVEYPFRI*STVSKVTRLSE Trigger: CTCAGATAATCTAGTCACTTTCGATACTGTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR GCA 72 bp | CATTTAAAGGCAGAGGTTTATTTACATCCCTCGTGGTaGAAACATGCTACAGGATTCTGTGAAAATTTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLKAEVYLHPSW*KHATGFCENLK Trigger: CTTCAAATTTTCACAGAATCCTGTAGCATGTTTGCACCACGAGGGATGTAAATAAACCTCTGCCTTTAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR TCA 72 bp | AATGAAAAATATCACTGCCGTCCTTTGAAATTTCCATaGAGAGTACAATGCGGGCAATTATATGAGGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: NEKYHCRPLKFP*RVQCGQLYEDA Trigger: AGCATCCTCATATAATTGCCCGCATTGTACTCTTCATGGAAATTTCAAAGGACGGCAGTGATATTTTTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCCTCCTCCTCCATTGGTaGAGAAGGTGGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLARSKSLPLHATPKKSCLLLHW*RRWWGR Trigger: CCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAG...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCCTCCTCCTCCTCCATTaGTGCAGAAGGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLARSKSLPLHATPKKSLLLLH*CRRWWG Trigger: CCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAG...GCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGGGGTCTGGGTCGAGGTaGTCTGGATGGGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQEQKPSPSCHTQEELGSGSR*SGWDGD Trigger: ATCCCCATCCCATCCAGACCACCTCGACCCAGACCC...CAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCAACACTAGCGCCAAGTaGCCTGGACTTCTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLARSKSLPLHATPKKSCNTSAK*PGLLCL Trigger: GAGGCAAAGAAGTCCAGGTCACTTGGCGCTAGTGTT...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGGTGTACCACTTTGTCTaGGGTGCCTGGTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQEQKPSPSCHTQEELVYHFV*GAWCVG Trigger: ACCCACACACCAGGCACCTCAGACAAAGTGGTACAC...CAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGATTTTTGCAAGAGGGCTaGTCCTGGGCTTGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQAWPGAKAFPFMPHPRRFLQEG*SWACSN Trigger: GTTGCTGCAAGCCCAGGAGCAGCCCTCTTGCAAAAA...TCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGACGGCGTGTCTCTCTTaGCATTCCTCCTCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLGQEQKPSPSCHTQEETACLS*HSSSPH Trigger: ATGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGT...CTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGGAGGTGCCTGGTGTGTaGGTCTGGGTCGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQYSSCWGFLCPSGIFFQEVPGV*VWVEVV Trigger: GACCACCTCGACCCAGACCCACACACCAGGCACCTC...CTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| 3UTR CAA 72 bp | GGGGCCACACATTCATGGCAGAATCACCAGTCTCCATaGCAAACCTCTGTGGCTGGTGGATTTGCAGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GATHSWQNHQSP*QTSVAGGFAVL Trigger: TAGGACTGCAAATCCACCAGCCACAGAGGTTTGCAATGGAGACTGGTGATTCTGCCATGAATGTGTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CCA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCACAAGAGGGCTGCTCCTaGGCTTGCAGCAACGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSFVCTKEEISTDIVSRSQEGCS*ACSNDP Trigger: GGGGTCGTTGCTGCAAGCCCAGGAGCAGCCCTCTTG...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGCATTGGTGCAGAAGGTaGTGGGGGAGGGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRHWCRR*WGRVLD Trigger: ATCAAGGACCCTCCCCCACCACCTTCTGCACCAATG...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | AAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGTTTGTTCAGGACAGGTaGAGGACAAAGGATGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLGQEQKPSPSCHTQEELFVQDR*RTKDGT Trigger: AGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAA...CAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCTTGACAGGGAAAACCTaGTCCTTGGAATCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLARSKSLPLHATPKKSCLTGKT*SLESAI Trigger: AATTGCTGATTCCAAGGACCAGGTTTTCCCTGTCAA...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTACATTTAGGTGTCATTGGTGCAGAAGGTaGTGGGGGAGGGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSCVHLASSSSTFRCHWCRR*WGRVLD Trigger: ATCAAGGACCCTCCCCCACCACCTTCTGCACCAATG...ACACCTAAATGTACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAAGAGGTGCCTGGTGTGTaGGTCTGGGTCGAGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQEVPGV*VWVEVV Trigger: GACCACCTCGACCCAGACCCACACACCAGGCACCTC...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | GCTTCCAGAGTCTTGAGTCAGCATCTGCTTTCTCTGCCTGTGTATCAGCCCCAACCCTACACAGACACTTaGAGGACTCAATTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASRVLSQHLLSLPVYQPQPYTDT*RTQFQD Trigger: ATCCTGGAATTGAGTCCTTCAAGTGTCTGTGTAGGG...TTGGGGCTGATACACAGGCAGAGAAAGCAGATGCTGACTCAAGACTCTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGGTGTACCACTTTGTCTaGGGTGCCTGGTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVVYHFV*GAWCVG Trigger: ACCCACACACCAGGCACCTCAGACAAAGTGGTACAC...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCTGTATATGTGCTGTTTaGAGTGAATGTACAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLARSKSLPLHATPKKSCCICAV*SECTED Trigger: GTCCTCTGTACATTCACTGCAAACAGCACATATACA...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGGTTCTCTGCATAAGATaGTACCAGGCCGTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRVLCIR*YQAVQL Trigger: AAGCTGGACGGCCTGGTACCATCTTATGCAGAGAAC...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CCA 90 bp | ACCGGACTGTCGGTTCTGTTGGAAATCAGCATCATGAAGATACACTGTCACACTTGGTGCAGAAGGTGGTaGGGGAGGGTCCTTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: TGLSVLLEISIMKIHCHTWCRRW*GRVLDN Trigger: GTTATCAAGGACCCTCCCCCACCACCTTCTGCACCA...AGTGTGACAGTGTATCTTCATGATGCTGATTTCCAACAGAACCGACAGTCCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGAACACTAGCGCCAAGTaGCCTGGACTTCTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVNTSAK*PGLLCL Trigger: GAGGCAAAGAAGTCCAGGTCACTTGGCGCTAGTGTT...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR TCA 90 bp | TGGGGAAAGCTCATGCCTCAAAATTCGCATCATTCCAGCTTCCAGAGTCTTGAGAGGATGGAACTTGGCTaGATGCTCACTGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WGKLMPQNSHHSSFQSLERMELG*MLTGFS Trigger: TGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCT...CTCAAGACTCTGGAAGCTGGAATGATGCGAATTTTGAGGCATGAGCTTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGATACATTCTGTGGCTGTaGTTGTTAAGGATCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQAWPGAKAFPFMPHPRRYILWL*LLRILR Trigger: TCTCAAGATCCTTAACAATCACAGCCACAGAATGTA...TCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR GCA 90 bp | ATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGCTTTGCCTCGTTCTCTaGATAAGATGGTACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IQYSSCWGFLCPSGIFFQLCLVL*IRWYQA Trigger: GGCCTGGTACCATCTTATGCAGAGAACGAGGCAAAG...CTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCGGGTCTGGGTCGAGGTaGTCTGGATGGGATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HEPTASFNYTTDAPISLSGSGSR*SGWDGD Trigger: ATCCCCATCCCATCCAGACCACCTCGACCCAGACCC...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | GCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTACATTTAGGTGTATGCCTTTGAGAGCTTaGAATCCACCTTTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAGVSCVHLASSSSTFRCMPLRA*NPPLTG Trigger: CCCTGTCAAAGGTGGATTTCAAGCTCTCAAAGGCAT...ACACCTAAATGTACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTATGTGCTGTTTGCAGTaGATGTACAGAGGACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSIPAAGVSCVHLASSSSMCCLQ*MYRGHC Trigger: GCAGTGTCCTCTGTACATTCACTGCAAACAGCACAT...ACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGAAAGCTCATGCCTCAAAATTCGCATCATTCCAGCTTCCAGAGTCTTGAGTGGAACTTGGCTGAATaGTCACTGGCTTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: WGKLMPQNSHHSSFQSLEWNLAE*SLASHS Trigger: AGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCA...CTCAAGACTCTGGAAGCTGGAATGATGCGAATTTTGAGGCATGAGCTTTCCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTGATCAAAGCCCAGAGTaGATCCAAACGACCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSIPAAGVSCVHLASSSSDQSPE*IQTTLD Trigger: ATCAAGGGTCGTTTGGATGCACTCTGGGCTTTGATC...ACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGAGCTTTAGTCCTTCATaGATGTATGTTTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKLGQEQKPSPSCHTQEESFSPS*MYVSPT Trigger: AGTTGGAGAAACATACATCCATGAAGGACTAAAGCT...CTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCCAGAGTCTTGAGTCAGCATCTGCTTTCTCTGCCTGTGTATCAGCCCCAATGGCTGAATGCTCACTaGCTTCTCACTCTTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ASRVLSQHLLSLPVYQPQWLNAH*LLTLCI Trigger: TATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCA...TTGGGGCTGATACACAGGCAGAGAAAGCAGATGCTGACTCAAGACTCTGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTGTGCAGGACAAAGGATaGAACTTGGCTGAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSIPAAGVSCVHLASSSSVQDKG*NLAECS Trigger: TGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCAC...ACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR TCA 90 bp | ACCGGACTGTCGGTTCTGTTGGAAATCAGCATCATGAAGATACACTGTCACACTCCCTACACAGACACTTaGAGGACTCAATTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGLSVLLEISIMKIHCHTPYTDT*RTQFQD Trigger: ATCCTGGAATTGAGTCCTTCAAGTGTCTGTGTAGGG...AGTGTGACAGTGTATCTTCATGATGCTGATTTCCAACAGAACCGACAGTCCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CCA 90 bp | CAACAAAAAGTGAAGCTGGGTATTGATATAACACAAAATAAAGCTGGGAAGACACAAGAGGGCTGCTCCTaGGCTTGCAGCAACGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQKVKLGIDITQNKAGKTQEGCS*ACSNDP Trigger: GGGGTCGTTGCTGCAAGCCCAGGAGCAGCCCTCTTG...TGTCTTCCCAGCTTTATTTTGTGTTATATCAATACCCAGCTTCACTTTTTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACGGAAAACCTGGTCCTTaGAATCAGCAATTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGALCQVSSRISISHLKYGKPGP*NQQFFP Trigger: TGGAAAGAATTGCTGATTCCAAGGACCAGGTTTTCC...GTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CAA 72 bp | CTTGCATCCAGTACCTTGAGGCGTCTCGTCTACATTTaGTCATGCGTGTGCACTTTCAGTGTAACAGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LASSTLRRLVYI*SCVCTFSVTVT Trigger: TGTCACTGTTACACTGAAAGTGCACACGCATGACAAAATGTAGACGAGACGCCTCAAGGTACTGGATGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCTTTTTGCAAGAGGGCTaGTCCTGGGCTTGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HEPTASFNYTTDAPISLSFLQEG*SWACSN Trigger: GTTGCTGCAAGCCCAGGAGCAGCCCTCTTGCAAAAA...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTCTCCTCCTCCATTGGTaGAGAAGGTGGTGGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: INLVHNFKGNGIPSVFEPLLLHW*RRWWGR Trigger: CCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAG...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CCA 90 bp | ATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGGGAAAACCTGGTCCTTaGAATCAGCAATTCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQYSSCWGFLCPSGIFFQGKPGP*NQQFFP Trigger: TGGAAAGAATTGCTGATTCCAAGGACCAGGTTTTCC...CTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTCTCCTCCTCCTCCATTaGTGCAGAAGGTGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: INLVHNFKGNGIPSVFEPLLLLH*CRRWWG Trigger: CCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAG...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| 3UTR CAA 72 bp | TGTAAGGCACAAAGTAATGGAGGACTTGGAAAGGCTTaGCTATCTGACATAGCTACAAGGCAGTGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CKAQSNGGLGKA*LSDIATRQWTP Trigger: TGGAGTCCACTGCCTTGTAGCTATGTCAGATAGCAAAGCCTTTCCAAGTCCTCCATTACTTTGTGCCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAACTTGAAATCCACCTTTaGCAGGGAAAACCTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQLEIHL*QGKPGP Trigger: AGGACCAGGTTTTCCCTGTCAAAGGTGGATTTCAAG...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAAATGCCTTTGAGAGCTTaGAATCCACCTTTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQMPLRA*NPPLTG Trigger: CCCTGTCAAAGGTGGATTTCAAGCTCTCAAAGGCAT...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | GACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCACCAGTCAGAACAACTTaGAATTTCTCCCCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: DSFVCTKEEISTDIVSRSPVRTT*NFSPTQ Trigger: CTGTGTAGGGGAGAAATTTCAAGTTGTTCTGACTGG...TGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR TCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCAGGATGGAACTTGGCTaGATGCTCACTGGCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HEPTASFNYTTDAPISLSRMELG*MLTGFS Trigger: TGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCT...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGCTTTGCCTCGTTCTCTaGATAAGATGGTACCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKYHEWVCACIRNEMPFGLCLVL*IRWYQA Trigger: GGCCTGGTACCATCTTATGCAGAGAACGAGGCAAAG...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR GCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATGGAACTTGGCTGAATaGTCACTGGCTTCTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQWNLAE*SLASHS Trigger: AGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAAGTGCAGGACAAAGGATaGAACTTGGCTGAATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQVQDKG*NLAECS Trigger: TGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCAC...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CCA 90 bp | CAGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATACCTCATCACCTTCCTaGGGTCTCATCAAGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: QKTTQYTKHCTKYDQCVYTSSPS*GLIKDT Trigger: GGTGTCCTTGATGAGACCCCAGGAAGGTGATGAGGT...ATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR TCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGATGTGCTGTTTGCAGTaGATGTACAGAGGACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKYHEWVCACIRNEMPFGMCCLQ*MYRGHC Trigger: GCAGTGTCCTCTGTACATTCACTGCAAACAGCACAT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR TCA 90 bp | ACCGGACTGTCGGTTCTGTTGGAAATCAGCATCATGAAGATACACTGTCACACTTACATTCTGTGGCTGTaGTTGTTAAGGATCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGLSVLLEISIMKIHCHTYILWL*LLRILR Trigger: TCTCAAGATCCTTAACAATCACAGCCACAGAATGTA...AGTGTGACAGTGTATCTTCATGATGCTGATTTCCAACAGAACCGACAGTCCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR GCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATTTGTTCAGGACAGGTaGAGGACAAAGGATGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQFVQDR*RTKDGT Trigger: AGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CCA 90 bp | CAACAAAAAGTGAAGCTGGGTATTGATATAACACAAAATAAAGCTGGGAAGACATGGTGCAGAAGGTGGTaGGGGAGGGTCCTTGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QQKVKLGIDITQNKAGKTWCRRW*GRVLDN Trigger: GTTATCAAGGACCCTCCCCCACCACCTTCTGCACCA...TGTCTTCCCAGCTTTATTTTGTGTTATATCAATACCCAGCTTCACTTTTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| 3UTR CAA 72 bp | ATTGTCTATAACAGTTCACATCAAAGCAGGCGCGCTTaGTCAGGTTTCCAGTCGAATATCCATTTCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IVYNSSHQSRRA*SGFQSNIHFAS Trigger: AGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGCTTTGATGTGAACTGTTATAGACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 72 bp | ATCTTCATTTCAAGCTATTTACTGCAAACAGTTTCTTaGACACCAGAGCAAGCTTGGCCAGGAGCAAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFISSYLLQTVS*TPEQAWPGAKA Trigger: GGCTTTTGCTCCTGGCCAAGCTTGCTCTGGTGTCAAAGAAACTGTTTGCAGTAAATAGCTTGAAATGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR TCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAACCGTCAAAGCAATTATaGTACTGGAGGCTTTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQPSKQL*YWRLLS Trigger: GCTTAAAAGCCTCCAGTATCATAATTGCTTTGACGG...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR GCA 90 bp | TTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTTGGCAAAATAATGGTTaGTTGGGAAGAAAACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSIPAAGVSCVHLASSSSWQNNG*LGRKHN Trigger: ATTGTGTTTTCTTCCCAAGCAACCATTATTTTGCCA...ACTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATGGCTGAATGCTCACTaGCTTCTCACTCTTTGTATA | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQWLNAH*LLTLCI Trigger: TATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR TCA 90 bp | AGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATTCCAGTCAGAACAACTTaGAATTTCTCCCCTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRPLSTLSIAQNMTSVYIPVRTT*NFSPTQ Trigger: CTGTGTAGGGGAGAAATTTCAAGTTGTTCTGACTGG...AATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR GCA 90 bp | CATGAGCCTACTGCTTCCTTTAACTATACAACAGATGCTCCAATTAGTCTAAGCTGTATATGTGCTGTTTaGAGTGAATGTACAGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HEPTASFNYTTDAPISLSCICAV*SECTED Trigger: GTCCTCTGTACATTCACTGCAAACAGCACATATACA...GCTTAGACTAATTGGAGCATCTGTTGTATAGTTAAAGGAAGCAGTAGGCTCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTGATCAAAGCCCAGAGTaGATCCAAACGACCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: INLVHNFKGNGIPSVFEPDQSPE*IQTTLD Trigger: ATCAAGGGTCGTTTGGATGCACTCTGGGCTTTGATC...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR TCA 90 bp | AGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATTCCGTCAAAGCAATTATaGTACTGGAGGCTTTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRPLSTLSIAQNMTSVYIPSKQL*YWRLLS Trigger: GCTTAAAAGCCTCCAGTATCATAATTGCTTTGACGG...AATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR GCA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATGGCAAAATAATGGTTaGTTGGGAAGAAAACACAAT | + |
|
Preference number: 4 (lower is better) Translates to: THLFVQRRRSRLTSCPDQWQNNG*LGRKHN Trigger: ATTGTGTTTTCTTCCCAAGCAACCATTATTTTGCCA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CCA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGAGCTTTAGTCCTTCATaGATGTATGTTTCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: LKYHEWVCACIRNEMPFGSFSPS*MYVSPT Trigger: AGTTGGAGAAACATACATCCATGAAGGACTAAAGCT...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 72 bp | TACCAAAGAAACATAGCCAGAGCTTCTGTAGTATTTTaGATGCTCTTAAAATATCACGAATGGGTGTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQRNIARASVVF*MLLKYHEWVCA Trigger: GGCACACACCCATTCGTGATATTTTAAGAGCATCAAAAATACTACAGAAGCTCTGGCTATGTTTCTTTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR GCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTAATCCTCCAGTCCTTTaGCAATTTTGTACCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: INLVHNFKGNGIPSVFEPNPPVL*QFCTCL Trigger: GAGACAGGTACAAAATTGGCAAAGGACTGGAGGATT...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CCA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTTTGACAGGGAAAACCTaGTCCTTGGAATCAGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: INLVHNFKGNGIPSVFEPLTGKT*SLESAI Trigger: AATTGCTGATTCCAAGGACCAGGTTTTCCCTGTCAA...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 72 bp | TCTGTAAAACCACCAACTAGAAATGTCTCCATCAACTaGCTCCTCAATACAGATAGTGCTTCAATCTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVKPPTRNVSIN*LLNTDSASILK Trigger: CTTTAAGATTGAAGCACTATCTGTATTGAGGAGCAAGTTGATGGAGACATTTCTAGTTGGTGGTTTTACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| 3UTR CAA 72 bp | ACCCGTAACATCAACCATGAATCAACTGTGAACATGTaGGATATTTTACAATGGAATAGAATTCCATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRNINHESTVNM*DILQWNRIPSC Trigger: ACAAGATGGAATTCTATTCCATTGTAAAATATCCAACATGTTCACAGTTGATTCATGGTTGATGTTACGGGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTACGCATGGCTCCACTaGGCTCTCATGAGGCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLARSKSLPLHATPKKSYAWLH*ALMRHG Trigger: GCCGTGCCTCATGAGAGCCAAGTGGAGCCATGCGTA...GCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS TCA 90 bp | CAGAGTGCATCCAAACGACCCTTGATTGGCGTGTACCACTTTGTCTaGGGTGCCTGGTGTGTGGGTCTGGGTCGAGGTGGTCTGGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSASKRPLIGVYHFV*GAWCVGLGRGGLDG Trigger: CCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACAAAGTGGTACACGCCAATCAAGGGTCGTTTGGATGCACTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 90 bp | GTTGGGCAAAGGATCCTCCTCCTCCTCCTCCATTGGTGCAGAAGGTaGTGGGGGAGGGTCCTTGATAACCACTTTGCAGCAAAGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGQRILLLLLHWCRR*WGRVLDNHFAAKGP Trigger: TGGCCCCTTTGCTGCAAAGTGGTTATCAAGGACCCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAGGAGGATCCTTTGCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 90 bp | GTACCACTTTGTCTGAGGTGCCTGGTGTGTGGGTCTGGGTCGAGGTaGTCTGGATGGGATGGGGATCTCTTCTTCAGGGACCATCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VPLCLRCLVCGSGSR*SGWDGDLFFRDHHH Trigger: GTGGTGATGGTCCCTGAAGAAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACAAAGTGGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCCCACTGTTGGCGTGTACCACTTaGTCTGAGGTGCCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSKSLPLHATPKKSCPLLACTT*SEVPGV Trigger: CACACCAGGCACCTCAGACAAAGTGGTACACGCCAA...CAGTGGGCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCCACGGCGTGTCTCTCTaGCCATTCCTCCTCACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLARSKSLPLHATPKKSCHGVSL*PFLLTS Trigger: TGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGTG...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS CCA 90 bp | GGGCAAAGGATCCTCCTCCTCCTCCTCCATTGGTGCAGAAGGTGGTaGGGGAGGGTCCTTGATAACCACTTTGCAGCAAAGGGGCCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GQRILLLLLHWCRRW*GRVLDNHFAAKGPK Trigger: TTTTGGCCCCTTTGCTGCAAAGTGGTTATCAAGGACCCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAGGAGGATCCTTTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 90 bp | ACTTTGTCTGAGGTGCCTGGTGTGTGGGTCTGGGTCGAGGTGGTCTaGATGGGATGGGGATCTCTTCTTCAGGGACCATCACCACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TLSEVPGVWVWVEVV*MGWGSLLQGPSPQH Trigger: ATGCTGTGGTGATGGTCCCTGAAGAAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS TCA 90 bp | TCGTTAGTGTCTGCTCCTGATACGCATGGCTCCACTTGGCTCTCATaGGGCACGGCGTGTCTCTCTTGCCATTCCTCCTCACCTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLVSAPDTHGSTWLS*GTACLSCHSSSPHH Trigger: GTGATGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGTGCCTCATGAGAGCCAAGTGGAGCCATGCGTATCAGGAGCAGACACTAACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS GCA 90 bp | CCACTTCTTGTTGGGCAAAGGATCCTCCTCCTCCTCCTCCATTGGTaGAGAAGGTGGTGGGGGAGGGTCCTTGATAACCACTTTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLVGQRILLLLLHW*RRWWGRVLDNHFAA Trigger: TGCTGCAAAGTGGTTATCAAGGACCCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAGGAGGATCCTTTGCCCAACAAGAAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 90 bp | TGTCTGAGGTGCCTGGTGTGTGGGTCTGGGTCGAGGTGGTCTGGATaGGATGGGGATCTCTTCTTCAGGGACCATCACCACAGCATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CLRCLVCGSGSRWSG*DGDLFFRDHHHSIF Trigger: AAAAATGCTGTGGTGATGGTCCCTGAAGAAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | GCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCGTGACCTGGACTTCTTaGCCTCGTTCTCTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASLARSKSLPLHATPKKSVTWTS*PRSLHK Trigger: CTTATGCAGAGAACGAGGCAAAGAAGTCCAGGTCAC...GCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | AGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGCATGGCTGCAATCCCATaGGTACATTCTGTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLARSKSLPLHATPKKSCMAAIP*VHSVAV Trigger: CACAGCCACAGAATGTACCAATGGGATTGCAGCCAT...GCAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS CCA 90 bp | CACGGCGTGTCTCTCTTGCCATTCCTCCTCACCTCATCACCTTCCTaGGGTCTCATCAAGGACACCCGGTCATACTGCTTCATGATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HGVSLLPFLLTSSPS*GLIKDTRSYCFMIK Trigger: TTTGATCATGAAGCAGTATGACCGGGTGTCCTTGATGAGACCCCAGGAAGGTGATGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | AGCAAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGAAATCGAAGGCTTTTTaGCAAGAGGGCTGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKLGQEQKPSPSCHTQEEKSKAF*QEGCSW Trigger: CCAGGAGCAGCCCTCTTGCAAAAAAGCCTTCGATTT...CTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS GCA 90 bp | CCCTCATCACCTTCCTGGGGTCTCATCAAGGACACCCGGTCATACTaGTTCATGATCAAAGCCCAGAGTGCATCCAAACGACCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PSSPSWGLIKDTRSY*FMIKAQSASKRPLI Trigger: AATCAAGGGTCGTTTGGATGCACTCTGGGCTTTGATCATGAAGCAGTATGACCGGGTGTCCTTGATGAGACCCCAGGAAGGTGATGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CAA 90 bp | AAGCTTGGCCAGGAGCAAAAGCCTTCCCCTTCATGCCACACCCAAGAAGAGCTGGATGCCTTTGAGAGCTaGAAATCCACCTTTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLGQEQKPSPSCHTQEELDAFES*KSTFDR Trigger: CCTGTCAAAGGTGGATTTCAAGCTCTCAAAGGCATC...CAGCTCTTCTTGGGTGTGGCATGAAGGGGAAGGCTTTTGCTCCTGGCCAAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | TTAGTGTCATTTGATAAGCCTTTGTGCTCGCAGAGAGACATCCCACTGACCCGGTTGGCGTGTACCACTTaGTCTGAGGTGCCTGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSFDKPLCSQRDIPLTRLACTT*SEVPGV Trigger: CACACCAGGCACCTCAGACAAAGTGGTACACGCCAA...CCGGGTCAGTGGGATGTCTCTCTGCGAGCACAAAGGCTTATCAAATGACACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS GCA 90 bp | ACCTCATCACCTTCCTGGGGTCTCATCAAGGACACCCGGTCATACTaGTTCATGATCAAAGCCCAGAGTGCATCCAAACGACCCTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TSSPSWGLIKDTRSY*FMIKAQSASKRPLI Trigger: AATCAAGGGTCGTTTGGATGCACTCTGGGCTTTGATCATGAAGCAGTATGACCGGGTGTCCTTGATGAGACCCCAGGAAGGTGATGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTGGGCTGCTCCTGGGCTaGCAGCAACGACCCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: INLVHNFKGNGIPSVFEPGLLLG*QQRPRT Trigger: GGTCCGGGGTCGTTGCTGCAAGCCCAGGAGCAGCCC...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CAA 90 bp | CAACAAAAAGTGAAGCTGGGTATTGATATAACACAAAATAAAGCTGGGAAGACAGGGCTGCTCCTGGGCTaGCAGCAACGACCCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QQKVKLGIDITQNKAGKTGLLLG*QQRPRT Trigger: GGTCCGGGGTCGTTGCTGCAAGCCCAGGAGCAGCCC...TGTCTTCCCAGCTTTATTTTGTGTTATATCAATACCCAGCTTCACTTTTTGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCGCGCTTTGTCAGGTTTCCAGTCGAATATCCATTTCGCATCTGAAGTACAAATCGAAGGCTTTTTaGCAAGAGGGCTGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGALCQVSSRISISHLKYKSKAF*QEGCSW Trigger: CCAGGAGCAGCCCTCTTGCAAAAAAGCCTTCGATTT...GTACTTCAGATGCGAAATGGATATTCGACTGGAAACCTGACAAAGCGCGCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | GTGAATCATGGGCTATCGCCGATGACTTTCATCACCTCTCATGTCGATGGCAGAGTGACCTGGACTTCTTaGCCTCGTTCTCTGCATAAG | + |
|
Preference number: 5 (lower is better) Translates to: VNHGLSPMTFITSHVDGRVTWTS*PRSLHK Trigger: CTTATGCAGAGAACGAGGCAAAGAAGTCCAGGTCAC...TCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | GTGAATCATGGGCTATCGCCGATGACTTTCATCACCTCTCATGTCGATGGCAGAGATGCCTTTGAGAGCTaGAAATCCACCTTTGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNHGLSPMTFITSHVDGRDAFES*KSTFDR Trigger: CCTGTCAAAGGTGGATTTCAAGCTCTCAAAGGCATC...TCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | GTGAATCATGGGCTATCGCCGATGACTTTCATCACCTCTCATGTCGATGGCAGATCCTTGATAACCACTTaGCAGCAAAGGGGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VNHGLSPMTFITSHVDGRSLITT*QQRGQN Trigger: GTTTTGGCCCCTTTGCTGCAAAGTGGTTATCAAGGA...TCTGCCATCGACATGAGAGGTGATGAAAGTCATCGGCGATAGCCCATGATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | TACATAATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCACAGTCGGCCACTTCTaGTTGGGCAAAGGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YIIQYSSCWGFLCPSGIFTVGHF*LGKGSS Trigger: GGAGGATCCTTTGCCCAACAAGAAGTGGCCGACTGT...GAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAATTATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS TCA 90 bp | TTGTTCAAAATCAAGGACCCCAACGCAGTAAACACTAGCGCCAAGTaGCCTGGACTTCTTTGCCTCGTTCTCTGCATAAGATGGTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKIKDPNAVNTSAK*PGLLCLVLCIRWYQ Trigger: CTGGTACCATCTTATGCAGAGAACGAGGCAAAGAAGTCCAGGTCACTTGGCGCTAGTGTTTACTGCGTTGGGGTCCTTGATTTTGAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS GCA 90 bp | TGGCTGAATGCTCACTGGCTTCTCACTCTTTGTATATGTGCTGTTTaGAGTGAATGTACAGAGGACACTGCCATCGTGACTGATCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: WLNAHWLLTLCICAV*SECTEDTAIVTDRR Trigger: ACGTCGATCAGTCACGATGGCAGTGTCCTCTGTACATTCACTGCAAACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | GTTACTAACCAGAGCAGTTGTGTGTCCAACCCTACAAAGTGTAAGCTCCATGTGATGGCTGCAATCCCATaGGTACATTCTGTGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTNQSSCVSNPTKCKLHVMAAIP*VHSVAV Trigger: CACAGCCACAGAATGTACCAATGGGATTGCAGCCAT...CACATGGAGCTTACACTTTGTAGGGTTGGACACACAACTGCTCTGGTTAGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | ATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTTCCAGTCCTTGATAACCACTTaGCAGCAAAGGGGCCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IQYSSCWGFLCPSGIFFQSLITT*QQRGQN Trigger: GTTTTGGCCCCTTTGCTGCAAAGTGGTTATCAAGGA...CTGGAAGAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAAACAGTCGGCCACTTCTaGTTGGGCAAAGGATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: THLFVQRRRSRLTSCPDQTVGHF*LGKGSS Trigger: GGAGGATCCTTTGCCCAACAAGAAGTGGCCGACTGT...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS TCA 90 bp | CCATCTTTGTTCAGGACAGGTGCAGGACAAAGGATGGAACTTGGCTaGATGCTCACTGGCTTCTCACTCTTTGTATATGTGCTGTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLFRTGAGQRMELG*MLTGFSLFVYVLFA Trigger: TGCAAACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CCA 90 bp | CAGGACAGGTGCAGGACAAAGGATGGAACTTGGCTGAATGCTCACTaGCTTCTCACTCTTTGTATATGTGCTGTTTGCAGTGAATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: QDRCRTKDGTWLNAH*LLTLCICAVCSECT Trigger: TGTACATTCACTGCAAACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS TCA 90 bp | AAGATGGTACCAGGCCGTCCAGCTTACCGTCCGTCAAAGCAATTATaGTACTGGAGGCTTTTAAGCCTCCTGCATTTTGAATTTGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: KMVPGRPAYRPSKQL*YWRLLSLLHFEFVR Trigger: ACGAACAAATTCAAAATGCAGGAGGCTTAAAAGCCTCCAGTATCATAATTGCTTTGACGGACGGTAAGCTGGACGGCCTGGTACCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CCA 90 bp | TTCTCCATCTTTGTTCAGGACAGGTGCAGGACAAAGGATGGAACTTaGCTGAATGCTCACTGGCTTCTCACTCTTTGTATATGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FSIFVQDRCRTKDGT*LNAHWLLTLCICAV Trigger: AACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAAGATGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CCA 90 bp | CAAGAGTTTCTCCATCTTTGTTCAGGACAGGTGCAGGACAAAGGATaGAACTTGGCTGAATGCTCACTGGCTTCTCACTCTTTGTATATG | + |
|
Preference number: 5 (lower is better) Translates to: QEFLHLCSGQVQDKG*NLAECSLASHSLYM Trigger: CATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAAGATGGAGAAACTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | TACATAATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCGGGAAAACCTGGTCCTaGGAATCAGCAATTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YIIQYSSCWGFLCPSGIFGKTWS*ESAILS Trigger: GGAAAGAATTGCTGATTCCAAGGACCAGGTTTTCCC...GAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAATTATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | ACCGGACTGTCGGTTCTGTTGGAAATCAGCATCATGAAGATACACTGTCACACTCTGGCTTCTCACTCTTaGTATATGTGCTGTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGLSVLLEISIMKIHCHTLASHS*YMCCLQ Trigger: CTGCAAACAGCACATATACAAAGAGTGAGAAGCCAG...AGTGTGACAGTGTATCTTCATGATGCTGATTTCCAACAGAACCGACAGTCCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATCTTTCCAGCTGAGCTaGTTCAAAATCAAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: THLFVQRRRSRLTSCPDQSFQLS*FKIKDP Trigger: GGGGTCCTTGATTTTGAACAAGCTCAGCTGGAAAGA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS-3UTR CAA 90 bp | TACATAATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCTCACCACAGCATTTTTaGCTTTCTCTAGCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: YIIQYSSCWGFLCPSGIFSPQHF*LSLALH Trigger: GTGCAAGGCTAGAGAAAGCAAAAAATGCTGTGGTGA...GAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAATTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | TTAAAATATCACGAATGGGTGTGTGCCTGCATCAGAAATGAAATGCCTTTTGGGGGGAAAACCTGGTCCTaGGAATCAGCAATTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKYHEWVCACIRNEMPFGGKTWS*ESAILS Trigger: GGAAAGAATTGCTGATTCCAAGGACCAGGTTTTCCC...CCCAAAAGGCATTTCATTTCTGATGCAGGCACACACCCATTCGTGATATTTTAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | TACATAATTCAGTATTCCAGCTGCTGGGGTTTCTTGTGTCCATCTGGCATCTTCAGAGCTGTGTTTCCTTaGCCACAGACAATAAATCGT | + |
|
Preference number: 5 (lower is better) Translates to: YIIQYSSCWGFLCPSGIFRAVFP*PQTINR Trigger: ACGATTTATTGTCTGTGGCAAAGGAAACACAGCTCT...GAAGATGCCAGATGGACACAAGAAACCCCAGCAGCTGGAATACTGAATTATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS-3UTR CAA 90 bp | ACTCATTTGTTTGTACAAAGGAGGAGATCTCGACTGACATCGTGTCCAGATCAATTTCAATCCAGTTATTaGCTACACTGCCAGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: THLFVQRRRSRLTSCPDQFQSSY*LHCQTC Trigger: ACAAGTCTGGCAGTGTAGCAAATAACTGGATTGAAA...TTGATCTGGACACGATGTCAGTCGAGATCTCCTCCTTTGTACAAACAAATGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
||
| CDS-3UTR CAA 90 bp | CAGAAGACCACTCAGTACACTAAGCATTGCACAAAATATGACCAGTGTGTATATCTGGCTTCTCACTCTTaGTATATGTGCTGTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKTTQYTKHCTKYDQCVYLASHS*YMCCLQ Trigger: CTGCAAACAGCACATATACAAAGAGTGAGAAGCCAG...ATATACACACTGGTCATATTTTGTGCAATGCTTAGTGTACTGAGTGGTCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | CAACAAAAAGTGAAGCTGGGTATTGATATAACACAAAATAAAGCTGGGAAGACATCTTTCCAGCTGAGCTaGTTCAAAATCAAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: QQKVKLGIDITQNKAGKTSFQLS*FKIKDP Trigger: GGGGTCCTTGATTTTGAACAAGCTCAGCTGGAAAGA...TGTCTTCCCAGCTTTATTTTGTGTTATATCAATACCCAGCTTCACTTTTTGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
||
| CDS-3UTR CAA 90 bp | ATTAATCTGGTTCATAACTTTAAGGGCAATGGAATTCCATCTGTCTTTGAACCTTCACCACAGCATTTTTaGCTTTCTCTAGCCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: INLVHNFKGNGIPSVFEPSPQHF*LSLALH Trigger: GTGCAAGGCTAGAGAAAGCAAAAAATGCTGTGGTGA...AGGTTCAAAGACAGATGGAATTCCATTGCCCTTAAAGTTATGAACCAGATTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS CCA 72 bp | TGCCTGGTGTGTGGGTCTGGGTCGAGGTGGTCTGGATaGGATGGGGATCTCTTCTTCAGGGACCATCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: CLVCGSGSRWSG*DGDLFFRDHHH Trigger: GTGGTGATGGTCCCTGAAGAAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 72 bp | TGTCTGAGGTGCCTGGTGTGTGGGTCTGGGTCGAGGTaGTCTGGATGGGATGGGGATCTCTTCTTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLRCLVCGSGSR*SGWDGDLFFRD Trigger: GTCCCTGAAGAAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CAA 72 bp | CTCCACTTGGCTCTCATGAGGCACGGCGTGTCTCTCTaGCCATTCCTCCTCACCTCATCACCTTCCTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHLALMRHGVSL*PFLLTSSPSWG Trigger: ACCCCAGGAAGGTGATGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGTGCCTCATGAGAGCCAAGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS CAA 90 bp | TACGCATGGCTCCACTTGGCTCTCATGAGGCACGGCGTGTCTCTCTaGCCATTCCTCCTCACCTCATCACCTTCCTGGGGTCTCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: YAWLHLALMRHGVSL*PFLLTSSPSWGLIK Trigger: CTTGATGAGACCCCAGGAAGGTGATGAGGTGAGGAGGAATGGCAAGAGAGACACGCCGTGCCTCATGAGAGCCAAGTGGAGCCATGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS TCA 72 bp | TCTGCTCCTGATACGCATGGCTCCACTTGGCTCTCATaGGGCACGGCGTGTCTCTCTTGCCATTCCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAPDTHGSTWLS*GTACLSCHSSS Trigger: TGAGGAGGAATGGCAAGAGAGACACGCCGTGCCTCATGAGAGCCAAGTGGAGCCATGCGTATCAGGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199088.2 |
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| CDS CCA 72 bp | AGGATCCTCCTCCTCCTCCTCCATTGGTGCAGAAGGTaGTGGGGGAGGGTCCTTGATAACCACTTTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RILLLLLHWCRR*WGRVLDNHFAA Trigger: TGCTGCAAAGTGGTTATCAAGGACCCTCCCCCACCACCTTCTGCACCAATGGAGGAGGAGGAGGAGGATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 72 bp | TGTACCACTTTGTCTGAGGTGCCTGGTGTGTGGGTCTaGGTCGAGGTGGTCTGGATGGGATGGGGATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: CTTLSEVPGVWV*VEVVWMGWGSL Trigger: AAGAGATCCCCATCCCATCCAGACCACCTCGACCCAGACCCACACACCAGGCACCTCAGACAAAGTGGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CAA 90 bp | ACACTGCCAGACTTGTCCAGTACGAAGTACAAATCGAAGGCTTTTTaGCAAGAGGGCTGCTCCTGGGCTTGCAGCAACGACCCCGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: TLPDLSSTKYKSKAF*QEGCSWACSNDPGP Trigger: CGGTCCGGGGTCGTTGCTGCAAGCCCAGGAGCAGCCCTCTTGCAAAAAAGCCTTCGATTTGTACTTCGTACTGGACAAGTCTGGCAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CCA 72 bp | CGGGAGAAGTTTATGCATCGGCCCTCATCACCTTCCTaGGGTCTCATCAAGGACACCCGGTCATACTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: REKFMHRPSSPS*GLIKDTRSYCF Trigger: GAAGCAGTATGACCGGGTGTCCTTGATGAGACCCCAGGAAGGTGATGAGGGCCGATGCATAAACTTCTCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031281.14 |
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| CDS GCA 72 bp | CCTTCCTGGGGTCTCATCAAGGACACCCGGTCATACTaGTTCATGATCAAAGCCCAGAGTGCATCCAAACGA | + |
|
Preference number: 6 (lower is better) Translates to: PSWGLIKDTRSY*FMIKAQSASKR Trigger: TCGTTTGGATGCACTCTGGGCTTTGATCATGAAGCAGTATGACCGGGTGTCCTTGATGAGACCCCAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS TCA 72 bp | ATCAAGGACCCCAACGCAGTAAACACTAGCGCCAAGTaGCCTGGACTTCTTTGCCTCGTTCTCTGCATAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IKDPNAVNTSAK*PGLLCLVLCIR Trigger: TCTTATGCAGAGAACGAGGCAAAGAAGTCCAGGTCACTTGGCGCTAGTGTTTACTGCGTTGGGGTCCTTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS GCA 72 bp | GGACAGGTGCAGGACAAAGGATGGAACTTGGCTGAATaGTCACTGGCTTCTCACTCTTTGTATATGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GQVQDKGWNLAE*SLASHSLYMCC Trigger: ACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS TCA 72 bp | CTGATCGACGTGACTGCTCTTCCAGTCAGAACAACTTaGAATTTCTCCCCTACACAGACACTTGAAGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: LIDVTALPVRTT*NFSPTQTLEGL Trigger: GAGTCCTTCAAGTGTCTGTGTAGGGGAGAAATTTCAAGTTGTTCTGACTGGAAGAGCAGTCACGTCGATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS TCA 72 bp | TTCAGGACAGGTGCAGGACAAAGGATGGAACTTGGCTaGATGCTCACTGGCTTCTCACTCTTTGTATATGTG | + |
|
Preference number: 6 (lower is better) Translates to: FRTGAGQRMELG*MLTGFSLFVYV Trigger: CACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS TCA 72 bp | CGATGGCTGCAATCCCATTGGTACATTCTGTGGCTGTaGTTGTTAAGGATCTTGAGACAGCAGACTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RWLQSHWYILWL*LLRILRQQTSH Trigger: ATGGGAAGTCTGCTGTCTCAAGATCCTTAACAATCACAGCCACAGAATGTACCAATGGGATTGCAGCCATCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS GCA 72 bp | GCTCACTGGCTTCTCACTCTTTGTATATGTGCTGTTTaGAGTGAATGTACAGAGGACACTGCCATCGTGACT | + |
|
Preference number: 6 (lower is better) Translates to: AHWLLTLCICAV*SECTEDTAIVT Trigger: AGTCACGATGGCAGTGTCCTCTGTACATTCACTGCAAACAGCACATATACAAAGAGTGAGAAGCCAGTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CAA 90 bp | TTTCTCCATCTTTGTTCAGGACAGGTGCAGGACAAAGGATGGAACTaGGCTGAATGCTCACTGGCTTCTCACTCTTTGTATATGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FLHLCSGQVQDKGWN*AECSLASHSLYMCC Trigger: ACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAAGATGGAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS GCA 72 bp | AACTTCAAGAGTTTCTCCATCTTTGTTCAGGACAGGTaGAGGACAAAGGATGGAACTTGGCTGAATGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: NFKSFSIFVQDR*RTKDGTWLNAH Trigger: GTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCACCTGTCCTGAACAAAGATGGAGAAACTCTTGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS GCA 72 bp | CAAGAGCAGCAACAACACCAAAATAGCTACGATGGCTaGAATCCCATTGGTACATTCTGTGGCTGTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: QEQQQHQNSYDG*NPIGTFCGCDC Trigger: ACAATCACAGCCACAGAATGTACCAATGGGATTGCAGCCATCGTAGCTATTTTGGTGTTGTTGCTGCTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CCA 72 bp | TGCAGGACAAAGGATGGAACTTGGCTGAATGCTCACTaGCTTCTCACTCTTTGTATATGTGCTGTTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CRTKDGTWLNAH*LLTLCICAVCS Trigger: ACTGCAAACAGCACATATACAAAGAGTGAGAAGCCAGTGAGCATTCAGCCAAGTTCCATCCTTTGTCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CAA 72 bp | CCAACTGGCTTAACGGCCTTTAAATCCTCCAGTCCTTaGCCAATTTTGTACCTGTCTCCAGTTAATGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PTGLTAFKSSSP*PILYLSPVNGK Trigger: TTTGCCATTAACTGGAGACAGGTACAAAATTGGCAAAGGACTGGAGGATTTAAAGGCCGTTAAGCCAGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CAA 90 bp | CCAACTGGCTTAACGGCCTTTAAATCCTCCAGTCCTTTGCCAATTTaGTACCTGTCTCCAGTTAATGGCAAAATAATGGTTGCTTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PTGLTAFKSSSPLPI*YLSPVNGKIMVAWE Trigger: TTCCCAAGCAACCATTATTTTGCCATTAACTGGAGACAGGTACAAAATTGGCAAAGGACTGGAGGATTTAAAGGCCGTTAAGCCAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CAA 72 bp | AACAACACCAAAATAGCTACGATGGCTGCAATCCCATaGGTACATTCTGTGGCTGTGATTGTTAAGGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: NNTKIATMAAIP*VHSVAVIVKDL Trigger: AAGATCCTTAACAATCACAGCCACAGAATGTACCAATGGGATTGCAGCCATCGTAGCTATTTTGGTGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS CAA 90 bp | CTCTTCCAGTCAGAACAACTTGAAATTTCTCCCCTACACAGACACTaGAAGGACTCAATTCCAGGATTTCAGTACATGATTGAGCTAATA | + |
|
Preference number: 6 (lower is better) Translates to: LFQSEQLEISPLHRH*KDSIPGFQYMIELI Trigger: TATTAGCTCAATCATGTACTGAAATCCTGGAATTGAGTCCTTCAAGTGTCTGTGTAGGGGAGAAATTTCAAGTTGTTCTGACTGGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
||
| CDS TCA 72 bp | AGGATCTTGAGACAGCAGACTTCCCATCATTATAGCTaGTTGAAACTTCAAGAGTTTCTCCATCTTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RILRQQTSHHYS*LKLQEFLHLCS Trigger: TGAACAAAGATGGAGAAACTCTTGAAGTTTCAATCAGCTATAATGATGGGAAGTCTGCTGTCTCAAGATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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| CDS CAA 72 bp | TTAACGGCCTTTAAATCCTCCAGTCCTTTGCCAATTTaGTACCTGTCTCCAGTTAATGGCAAAATAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: LTAFKSSSPLPI*YLSPVNGKIMV Trigger: AACCATTATTTTGCCATTAACTGGAGACAGGTACAAAATTGGCAAAGGACTGGAGGATTTAAAGGCCGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031281.14 ENSMUST00000199088.2 |
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