Pregenerated sensors for ANTKMT (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057411

Ensembl transcript IDs: ENSMUST00000072735.9, ENSMUST00000236161.2, ENSMUST00000236683.2, ENSMUST00000237093.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS-3UTR CCA 90 bp	GTGGCGCACGACTTTAATCCCAGCACTCCGGAGGCAGAGGCAGAGGCAGGCAGACGGAGACCACATTGGTaGGCCGCCAGCACGATCCTG	+
Preference number: 4 (lower is better) Translates to: VAHDFNPSTPEAEAEAGRRRPHW*AASTIL Trigger: CAGGATCGTGCTGGCGGCCCACCAATGTGGTCTCCG...TCTGCCTGCCTCTGCCTCTGCCTCCGGAGTGCTGGGATTAAAGTCGTGCGCCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237093.2
3UTR CAA 72 bp	ATCAGGTACAAGCAGGAAATCTTGAAACTGAGGAAGTaGGTGAATATTGGAGATCCCCAAGGAGTAGAAGCT	+
Preference number: 4 (lower is better) Translates to: IRYKQEILKLRK*VNIGDPQGVEA Trigger: AGCTTCTACTCCTTGGGGATCTCCAATATTCACCAACTTCCTCAGTTTCAAGATTTCCTGCTTGTACCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237093.2
CDS GCA 90 bp	CTGCAGCAGCAGCGCCCATATAGTATAGACGGCCAATCCCGAGCCTaGCGCCGCTTGCACTATCTCCAGCAAGCCCAGCCGCTTCTCGCG	+
Preference number: 5 (lower is better) Translates to: LQQQRPYSIDGQSRA*RRLHYLQQAQPLLA Trigger: CGCGAGAAGCGGCTGGGCTTGCTGGAGATAGTGCAAGCGGCGGCAGGCTCGGGATTGGCCGTCTATACTATATGGGCGCTGCTGCTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072735.9 ENSMUST00000237093.2
CDS GCA 90 bp	GGGAATCGTCCAGATACCACACGGGCCCCCACAGGGAGCTCTGCTTaGAGTTTGTCCTCCAGCAGTTGGAGCACACTGGGAGCCAGGAAC	+
Preference number: 5 (lower is better) Translates to: GNRPDTTRAPTGSSA*SLSSSSWSTLGARN Trigger: GTTCCTGGCTCCCAGTGTGCTCCAACTGCTGGAGGACAAACTGCAAGCAGAGCTCCCTGTGGGGGCCCGTGTGGTATCTGGACGATTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2
CDS GCA 90 bp	AAGGGGGAATCGTCCAGATACCACACGGGCCCCCACAGGGAGCTCTaGTTGCAGTTTGTCCTCCAGCAGTTGGAGCACACTGGGAGCCAG	+
Preference number: 5 (lower is better) Translates to: KGESSRYHTGPHREL*LQFVLQQLEHTGSQ Trigger: CTGGCTCCCAGTGTGCTCCAACTGCTGGAGGACAAACTGCAAGCAGAGCTCCCTGTGGGGGCCCGTGTGGTATCTGGACGATTCCCCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2
CDS CCA 90 bp	CCGTGCAAGTCCCACAAGCCACGGGTTCAGCTCATATCCCATAGCTaGACGGAGACCACATTGGTGGGCCGCCAGCACGATCCTGCCATC	+
Preference number: 5 (lower is better) Translates to: PCKSHKPRVQLISHS*TETTLVGRQHDPAI Trigger: GATGGCAGGATCGTGCTGGCGGCCCACCAATGTGGTCTCCGTCCAGCTATGGGATATGAGCTGAACCCGTGGCTTGTGGGACTTGCACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS GCA 90 bp	GTAGCAGACACTCGCAGAACAACCGGCTCTCCAGGCATGCAGCCGTaGAAGTCCCACAAGCCACGGGTTCAGCTCATATCCCATAGCTGG	+
Preference number: 5 (lower is better) Translates to: VADTRRTTGSPGMQP*KSHKPRVQLISHSW Trigger: CCAGCTATGGGATATGAGCTGAACCCGTGGCTTGTGGGACTTGCACGGCTGCATGCCTGGAGAGCCGGTTGTTCTGCGAGTGTCTGCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS CAA 72 bp	ACCACACGGGCCCCCACAGGGAGCTCTGCTTGCAGTTaGTCCTCCAGCAGTTGGAGCACACTGGGAGCCAGG	+
Preference number: 6 (lower is better) Translates to: TTRAPTGSSACS*SSSSWSTLGAR Trigger: CCTGGCTCCCAGTGTGCTCCAACTGCTGGAGGACAAACTGCAAGCAGAGCTCCCTGTGGGGGCCCGTGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2
CDS CAA 90 bp	CGTCCAGATACCACACGGGCCCCCACAGGGAGCTCTGCTTGCAGTTaGTCCTCCAGCAGTTGGAGCACACTGGGAGCCAGGAACACAGAC	+
Preference number: 6 (lower is better) Translates to: RPDTTRAPTGSSACS*SSSSWSTLGARNTD Trigger: GTCTGTGTTCCTGGCTCCCAGTGTGCTCCAACTGCTGGAGGACAAACTGCAAGCAGAGCTCCCTGTGGGGGCCCGTGTGGTATCTGGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2
CDS CAA 90 bp	GGGGAATCGTCCAGATACCACACGGGCCCCCACAGGGAGCTCTGCTaGCAGTTTGTCCTCCAGCAGTTGGAGCACACTGGGAGCCAGGAA	+
Preference number: 6 (lower is better) Translates to: GESSRYHTGPHRELC*QFVLQQLEHTGSQE Trigger: TTCCTGGCTCCCAGTGTGCTCCAACTGCTGGAGGACAAACTGCAAGCAGAGCTCCCTGTGGGGGCCCGTGTGGTATCTGGACGATTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2
CDS CAA 72 bp	TATAGTATAGACGGCCAATCCCGAGCCTGCCGCCGCTaGCACTATCTCCAGCAAGCCCAGCCGCTTCTCGCG	+
Preference number: 6 (lower is better) Translates to: YSIDGQSRACRR*HYLQQAQPLLA Trigger: CGCGAGAAGCGGCTGGGCTTGCTGGAGATAGTGCAAGCGGCGGCAGGCTCGGGATTGGCCGTCTATACTATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072735.9 ENSMUST00000237093.2
CDS CCA 72 bp	AGCTCATATCCCATAGCTGGACGGAGACCACATTGGTaGGCCGCCAGCACGATCCTGCCATCACCAGAGCCT	+
Preference number: 6 (lower is better) Translates to: SSYPIAGRRPHW*AASTILPSPEP Trigger: AGGCTCTGGTGATGGCAGGATCGTGCTGGCGGCCCACCAATGTGGTCTCCGTCCAGCTATGGGATATGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS CCA 72 bp	TCCCACAAGCCACGGGTTCAGCTCATATCCCATAGCTaGACGGAGACCACATTGGTGGGCCGCCAGCACGAT	+
Preference number: 6 (lower is better) Translates to: SHKPRVQLISHS*TETTLVGRQHD Trigger: ATCGTGCTGGCGGCCCACCAATGTGGTCTCCGTCCAGCTATGGGATATGAGCTGAACCCGTGGCTTGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS CCA 72 bp	TTCAGCTCATATCCCATAGCTGGACGGAGACCACATTaGTGGGCCGCCAGCACGATCCTGCCATCACCAGAG	+
Preference number: 6 (lower is better) Translates to: FSSYPIAGRRPH*WAASTILPSPE Trigger: CTCTGGTGATGGCAGGATCGTGCTGGCGGCCCACCAATGTGGTCTCCGTCCAGCTATGGGATATGAGCTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS CAA 72 bp	GTTCAGCTCATATCCCATAGCTGGACGGAGACCACATaGGTGGGCCGCCAGCACGATCCTGCCATCACCAGA	+
Preference number: 6 (lower is better) Translates to: VQLISHSWTETT*VGRQHDPAITR Trigger: TCTGGTGATGGCAGGATCGTGCTGGCGGCCCACCAATGTGGTCTCCGTCCAGCTATGGGATATGAGCTGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2 ENSMUST00000237093.2
CDS CCA 72 bp	GATGGCCTTGATGGGCACCCCACAAGAAGACACAGTTaGCCCAGAACCATGGACATCATAGGCCCAAACTCT	+
Preference number: 6 (lower is better) Translates to: DGLDGHPTRRHS*PRTMDIIGPNS Trigger: AGAGTTTGGGCCTATGATGTCCATGGTTCTGGGCCAACTGTGTCTTCTTGTGGGGTGCCCATCAAGGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072735.9 ENSMUST00000236161.2 ENSMUST00000236683.2