Pregenerated sensors for ANP32E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015749Ensembl transcript IDs: ENSMUST00000015893.13, ENSMUST00000165307.8, ENSMUST00000167876.3, ENSMUST00000168106.8, ENSMUST00000169426.8, ENSMUST00000170125.2, ENSMUST00000170213.2, ENSMUST00000171035.8, ENSMUST00000171368.8
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGAGCAGCTGGGAGGGGACACACAGCTGACCCGACCGACAGCCTaGTGGCACGGCCACCCAGAGACCGCTCCACGGCAAGTCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LEQLGGDTQLTRPTA*WHGHPETAPRQVWP Trigger: AGGCCAGACTTGCCGTGGAGCGGTCTCTGGGTGGCCGTGCCAGCAGGCTGTCGGTCGGGTCAGCTGTGTGTCCCCTCCCAGCTGCTCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR GCA 90 bp | AACCAGGTCAGACATGTGAAGTTGAAAGAGCAGCAGCCCCACTGTTaGAATTTCGATGTGTCCCAGAAGAGAGGCAAAATACGTATGCTG | + |
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Preference number: 1 (lower is better) Translates to: NQVRHVKLKEQQPHC*NFDVSQKRGKIRML Trigger: CAGCATACGTATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAGTGGGGCTGCTGCTCTTTCAACTTCACATGTCTGACCTGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR GCA 90 bp | ACTGAAACAAGGAAACAAAGCCAATCCTTTGGCGATCCCTGCACTTaGGCTGAACTCAGTACACATTTATCTCAGTCAGGCATGCAACTT | + |
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Preference number: 1 (lower is better) Translates to: TETRKQSQSFGDPCT*AELSTHLSQSGMQL Trigger: AAGTTGCATGCCTGACTGAGATAAATGTGTACTGAGTTCAGCGCAAGTGCAGGGATCGCCAAAGGATTGGCTTTGTTTCCTTGTTTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR GCA 90 bp | GCTACAACTGATCACGCTTTCAAAACTACAGGAAGAATTAAAGGTTaGTCTCAGAAACATAATAAATACTTCACAGAGTTGGTATCCAAA | + |
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Preference number: 1 (lower is better) Translates to: ATTDHAFKTTGRIKG*SQKHNKYFTELVSK Trigger: TTTGGATACCAACTCTGTGAAGTATTTATTATGTTTCTGAGAGCAACCTTTAATTCTTCCTGTAGTTTTGAAAGCGTGATCAGTTGTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAAAAGCAAGTGCCTTGTGCATGGAGCTTCCGGGACAAAGGGAGAGAGAGAGGCAGAACTGAGTCCATaGCCTGCCTCTGAAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: LKSKCLVHGASGTKGEREAELSP*PASEEN Trigger: GTTCTCTTCAGAGGCAGGTCATGGACTCAGTTCTGC...CTCTCTCTCTCCCTTTGTCCCGGAAGCTCCATGCACAAGGCACTTGCTTTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR TCA 90 bp | CACTGTTGCAATTTCGATGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGGTCACTGAGCAGAACTaGGTCCATGACCTGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: HCCNFDVSQKRGKIRMLMVTEQN*VHDLPL Trigger: CAGAGGCAGGTCATGGACTCAGTTCTGCTCAGTGAC...CATCAGCATACGTATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGCAATTTCGATGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGCTTGGCTGAGGTGCAGATaGAGTCTCTGGGGCATTACA | + |
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Preference number: 2 (lower is better) Translates to: LLQFRCVPEERQNTYADAWLRCR*SLWGIT Trigger: TGTAATGCCCCAGAGACTTCATCTGCACCTCAGCCA...AGCATCAGCATACGTATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCACTATGTTCCAATCAAAGGCTACAACTGATCACGCTTTCAAAACTACAGTGGCTGAGGTGCAGATaGAGTCTCTGGGGCATTACA | + |
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Preference number: 2 (lower is better) Translates to: LPLCSNQRLQLITLSKLQWLRCR*SLWGIT Trigger: TGTAATGCCCCAGAGACTTCATCTGCACCTCAGCCA...CTGTAGTTTTGAAAGCGTGATCAGTTGTAGCCTTTGATTGGAACATAGTGGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGTTGCAATTTCGATGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGGGGCATTACAGCTTTTaGCAGCTTTCTTTTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HCCNFDVSQKRGKIRMLMGHYSF*QLSFGW Trigger: CCATCCAAAAGAAAGCTGGCAAAAGCTGTAATGCCC...CATCAGCATACGTATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCGGTACTGTAACTTGAATGCTCCATCTCTTCCATGCCACTTGTTTGAAACCTTGCCAGCTTTCTTTTaGATGGGAACAGGAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: PRYCNLNAPSLPCHLFETLPAFF*MGTGMK Trigger: CTTCATTCCTGTTCCCATCCAAAAGAAAGCTGGCAA...GGTTTCAAACAAGTGGCATGGAAGAGATGGAGCATTCAAGTTACAGTACCGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | TTAAAAAGCAAGTGCCTTGTGCATGGAGCTTCCGGGACAAAGGGAGAGAGAGAGCATTCAAAAGACTACTaGCATTTCATATTACAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LKSKCLVHGASGTKGEREHSKDY*HFILQL Trigger: CAGCTGTAATATGAAATGGCAGTAGTCTTTTGAATG...CTCTCTCTCTCCCTTTGTCCCGGAAGCTCCATGCACAAGGCACTTGCTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCCACTATGTTCCAATCAAAGGCTACAACTGATCACGCTTTCAAAACTACAGGCTCCATCTCTTCCATaGCACTTGTTTGAAACCGAG | + |
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Preference number: 2 (lower is better) Translates to: LPLCSNQRLQLITLSKLQAPSLP*HLFETE Trigger: CTCGGTTTCAAACAAGTGGCATGGAAGAGATGGAGC...CTGTAGTTTTGAAAGCGTGATCAGTTGTAGCCTTTGATTGGAACATAGTGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCTCTCGCTCTGCTTCTACTTCCCAAACCATGATAGGAAAGCCTTCAGACATTCAAAAGACTACTaGCATTTCATATTACAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RTLSLCFYFPNHDRKAFRHSKDY*HFILQL Trigger: CAGCTGTAATATGAAATGGCAGTAGTCTTTTGAATG...TCTGAAGGCTTTCCTATCATGGTTTGGGAAGTAGAAGCAGAGCGAGAGGGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAACTTCTACAGAATAGAAAACCCACCCTTGCTTATTTGCATGAAAATAGGGCATTACAGCTTTTaGCAGCTTTCTTTTGGATGG | + |
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Preference number: 2 (lower is better) Translates to: TQNFYRIENPPLLICMKIGHYSF*QLSFGW Trigger: CCATCCAAAAGAAAGCTGGCAAAAGCTGTAATGCCC...TATTTTCATGCAAATAAGCAAGGGTGGGTTTTCTATTCTGTAGAAGTTCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGCTAAGTTTAAAAAGAAAGACTTAAAAAGCAAGTaGCTTGTGCATGGAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CVPEERQNTYADAKFKKKDLKSK*LVHGAS Trigger: GGAAGCTCCATGCACAAGGCACTTGCTTTTTAAGTC...TTTCTTTTTAAACTTAGCATCAGCATACGTATTTTGCCTCTCTTCTGGGACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAACTTCTACAGAATAGAAAACCCACCCTTGCTTATTTGCATGAAAATACCAGAACCTGGCATAGTTTaGAAAGAGAATTCTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: QNFYRIENPPLLICMKIPEPGIV*KENSLE Trigger: CTCTAAAGAATTCTCTTTGCAAACTATGCCAGGTTC...TGGTATTTTCATGCAAATAAGCAAGGGTGGGTTTTCTATTCTGTAGAAGTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR CCA 72 bp | CAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTaGCCTGGTCCTGGAGGTCTAATCGTCGTCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QCDRSPAPRSVR*PGPGGLIVVFL Trigger: GAGGAAGACGACGATTAGACCTCCAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170213.2 |
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| 3UTR GCA 72 bp | TCTCATCAGTTCTCAGCTGGCAATCAGTCTGACCTCTaGGAGAGGACGCTGCTGCTTATCCTAGCAGACTCG | + |
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Preference number: 3 (lower is better) Translates to: SHQFSAGNQSDL*ERTLLLILADS Trigger: CGAGTCTGCTAGGATAAGCAGCAGCGTCCTCTCGCAGAGGTCAGACTGATTGCCAGCTGAGAACTGATGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR TCA 72 bp | CTGTCACTGAGCAGAACTGAGTCCATGACCTGCCTCTaGAGAGAACCCTCTCGCTCTGCTTCTACTTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LSLSRTESMTCL*REPSRSASTSQ Trigger: TTGGGAAGTAGAAGCAGAGCGAGAGGGTTCTCTTCAGAGGCAGGTCATGGACTCAGTTCTGCTCAGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCGGGACAAAGGGAGAGAGAGAGAGGGGCCTGTCCGCTCATGTTTGAAGCCATCAAACAGTCTCCTATaGCCACTATGTTCCAATCAA | + |
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Preference number: 3 (lower is better) Translates to: FRDKGREREGPVRSCLKPSNSLL*PLCSNQ Trigger: TTGATTGGAACATAGTGGCAATAGGAGACTGTTTGA...TGGCTTCAAACATGAGCGGACAGGCCCCTCTCTCTCTCTCCCTTTGTCCCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR GCA 72 bp | AGACATGTGAAGTTGAAAGAGCAGCAGCCCCACTGTTaGAATTTCGATGTGTCCCAGAAGAGAGGCAAAATA | + |
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Preference number: 3 (lower is better) Translates to: RHVKLKEQQPHC*NFDVSQKRGKI Trigger: TATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAGTGGGGCTGCTGCTCTTTCAACTTCACATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR GCA 72 bp | GAAACAAGGAAACAAAGCCAATCCTTTGGCGATCCCTaGACTTGCGCTGAACTCAGTACACATTTATCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ETRKQSQSFGDP*TCAELSTHLSQ Trigger: CTGAGATAAATGTGTACTGAGTTCAGCGCAAGTGCAGGGATCGCCAAAGGATTGGCTTTGTTTCCTTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR-3UTR CAA 90 bp | AAACAGTCTCCTATTGCCACTATGTTCCAATCAAAGGCTACAACTGATCACGCTTTTGCCAGCTTTCTTTaGGATGGGAACAGGAATGAA | + |
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Preference number: 3 (lower is better) Translates to: KQSPIATMFQSKATTDHAFASFL*DGNRNE Trigger: TTCATTCCTGTTCCCATCCAAAAGAAAGCTGGCAAA...AGCGTGATCAGTTGTAGCCTTTGATTGGAACATAGTGGCAATAGGAGACTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR TCA 72 bp | AATTCTTTAGAGACTGACAGCAGGAGTTCCAATTACTaGAACAAGGAAACAAAGCCAATCCTTTGGCGATCC | + |
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Preference number: 3 (lower is better) Translates to: NSLETDSRSSNY*NKETKPILWRS Trigger: GGATCGCCAAAGGATTGGCTTTGTTTCCTTGTTTCAGTAATTGGAACTCCTGCTGTCAGTCTCTAAAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | GACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGGAGTCCCTCTCCCACTTCTaGGCCAGCTTCATCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: DNVIALQRPGVSGGLVLESLSHF*ASFILI Trigger: GATGAGGATGAAGCTGGCTCAGAAGTGGGAGAGGGA...CTCCAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170213.2 ENSMUST00000171368.8 |
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| CDS-3UTR TCA 90 bp | GACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGGAGATCCGTCCAGGTAGGTaGTCTGCTGCAGCAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: DNVIALQRPGVSGGLVLEIRPGR*SAAAVQ Trigger: TTGAACTGCTGCAGCAGATCACCTACCTGGACGGAT...CTCCAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | AAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGTCCCTCTCCCACTTCTaGGCCAGCTTCATCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: KDNVIALQRPGVSGGLVLSLSHF*ASFILI Trigger: GATGAGGATGAAGCTGGCTCAGAAGTGGGAGAGGGA...CAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170213.2 ENSMUST00000171368.8 |
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| CDS-3UTR TCA 90 bp | AACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCTCCCTCTCCCACTTCTaGGCCAGCTTCATCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: NKDNVIALQRPGVSGGLVSLSHF*ASFILI Trigger: GATGAGGATGAAGCTGGCTCAGAAGTGGGAGAGGGA...GACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170213.2 ENSMUST00000171368.8 |
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| CDS-3UTR CCA 90 bp | CAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGGAGTTTATTCAAGCTaGGAAGCCGGGCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QRQCDRSPAPRSVRWPGPGVYSS*EAGPRN Trigger: GTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACTCC...AGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS-3UTR TCA 90 bp | AGAAACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGTCCCTCTCCCACTTCTaGGCCAGCTTCATCCTCATC | + |
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Preference number: 4 (lower is better) Translates to: RNKDNVIALQRPGVSGGLSLSHF*ASFILI Trigger: GATGAGGATGAAGCTGGCTCAGAAGTGGGAGAGGGA...CAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170213.2 ENSMUST00000171368.8 |
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| CDS-3UTR GCA 90 bp | AGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGGAATTTGGACATTTCTCTaGCAGGACTTCCAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RQCDRSPAPRSVRWPGPGIWTFL*QDFQAS Trigger: GGAGGCTTGGAAGTCCTGGCAGAGAAATGTCCAAAT...TCCAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 |
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| CDS-3UTR CCA 90 bp | AACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCGGAGTTTATTCAAGCTaGGAAGCCGGGCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: NKDNVIALQRPGVSGGLVGVYSS*EAGPRN Trigger: GTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACTCC...GACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS-3UTR CCA 90 bp | AGAAACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGGAGTTTATTCAAGCTaGGAAGCCGGGCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RNKDNVIALQRPGVSGGLGVYSS*EAGPRN Trigger: GTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACTCC...CAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS-3UTR TCA 90 bp | AAGAAACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTATCCGTCCAGGTAGGTaGTCTGCTGCAGCAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: KKQRQCDRSPAPRSVRWPIRPGR*SAAAVQ Trigger: TTGAACTGCTGCAGCAGATCACCTACCTGGACGGAT...AGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | CAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGGAGGTTCGTCCTCTTCATCCTaGATTTCGTCTTTCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: QCDRSPAPRSVRWPGPGGSSSSS*ISSFIK Trigger: CTTAATGAAAGACGAAATTCAGGATGAAGAGGACGA...ACCTCCAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000169426.8 ENSMUST00000171368.8 |
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| CDS-3UTR GCA 90 bp | TTCCGGGACAAAGGGAGAGAGAGAGAGGGGCCTGTCCGCTCATGTTTGAAGCCAATTTGGACATTTCTCTaGCAGGACTTCCAAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FRDKGREREGPVRSCLKPIWTFL*QDFQAS Trigger: GGAGGCTTGGAAGTCCTGGCAGAGAAATGTCCAAAT...TGGCTTCAAACATGAGCGGACAGGCCCCTCTCTCTCTCTCCCTTTGTCCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165307.8 |
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| CDS-3UTR TCA 90 bp | AAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTGGCCTGGTCCTGCTTCGATTTCCCCATTaGCACACAAGCAATTATCGA | + |
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Preference number: 4 (lower is better) Translates to: KDNVIALQRPGVSGGLVLLRFPH*HTSNYR Trigger: TCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAG...CAGGACCAGGCCACCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| 3UTR CAA 72 bp | CGCCTGCCTCTGACACGAAGCCCTCGGTACTGTAACTaGAATGCTCCATCTCTTCCATGCCACTTGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: RLPLTRSPRYCN*NAPSLPCHLFE Trigger: TTCAAACAAGTGGCATGGAAGAGATGGAGCATTCAAGTTACAGTACCGAGGGCTTCGTGTCAGAGGCAGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | AGAGAACCCTCTCGCTCTGCTTCTACTTCCCAAACCATGATAGGAAAGCCTTCAATCCGTCCAGGTAGGTaGTCTGCTGCAGCAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: REPSRSASTSQTMIGKPSIRPGR*SAAAVQ Trigger: TTGAACTGCTGCAGCAGATCACCTACCTGGACGGAT...TGAAGGCTTTCCTATCATGGTTTGGGAAGTAGAAGCAGAGCGAGAGGGTTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR CCA 90 bp | TACATAAAGAAACAAAGACAATGTGATCGCTCTCCAGCGCCCAGGAGTGTCAGGTTCATAGCCTTCCGGTaGGCCAGCTTCATCTTCGTC | + |
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Preference number: 4 (lower is better) Translates to: YIKKQRQCDRSPAPRSVRFIAFR*ASFIFV Trigger: GACGAAGATGAAGCTGGCCCACCGGAAGGCTATGAA...CCTGACACTCCTGGGCGCTGGAGAGCGATCACATTGTCTTTGTTTCTTTATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000171368.8 |
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| CDS-3UTR TCA 90 bp | AGTTACACATCATCTCCTACTGGGACAGCTATCATACATAAAGAAACAAAGACAATCCGTCCAGGTAGGTaGTCTCCTCCGGGGCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: SYTSSPTGTAIIHKETKTIRPGR*SPPGLC Trigger: ACAGAGCCCCGGAGGAGATCACCTACCTGGACGGAT...TGTCTTTGTTTCTTTATGTATGATAGCTGTCCCAGTAGGAGATGATGTGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171368.8 |
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| 3UTR CAA 72 bp | CAGACATGTGAAGTTGAAAGAGCAGCAGCCCCACTGTaGCAATTTCGATGTGTCCCAGAAGAGAGGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QTCEVERAAAPL*QFRCVPEERQN Trigger: ATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAGTGGGGCTGCTGCTCTTTCAACTTCACATGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | TTAAAAAGCAAGTGCCTTGTGCATGGAGCTTCCGGGACAAAGGGAGAGAGAGAGTCGTCCTCTTCATCCTaGATTTCGTCTTTCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: LKSKCLVHGASGTKGERESSSSS*ISSFIK Trigger: CTTAATGAAAGACGAAATTCAGGATGAAGAGGACGA...CTCTCTCTCTCCCTTTGTCCCGGAAGCTCCATGCACAAGGCACTTGCTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR CCA 90 bp | CTATGTTCCAATCAAAGGCTACAACTGATCACGCTTTCAAAACTACAGGAAGAAGGAGTTTATTCAAGCTaGGAAGCCGGGCCAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LCSNQRLQLITLSKLQEEGVYSS*EAGPRN Trigger: GTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACTCC...TTCTTCCTGTAGTTTTGAAAGCGTGATCAGTTGTAGCCTTTGATTGGAACATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR CAA 72 bp | ACTTGCTATGTTAAAAACCAGGTCAGACATGTGAAGTaGAAAGAGCAGCAGCCCCACTGTTGCAATTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: TCYVKNQVRHVK*KEQQPHCCNFD Trigger: ATCGAAATTGCAACAGTGGGGCTGCTGCTCTTTCAACTTCACATGTCTGACCTGGTTTTTAACATAGCAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | CTGTTGCAATTTCGATGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGCTTCGTCCTCTTCATCCTaGATTTCGTCTTTCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: LLQFRCVPEERQNTYADASSSSS*ISSFIK Trigger: CTTAATGAAAGACGAAATTCAGGATGAAGAGGACGA...AGCATCAGCATACGTATTTTGCCTCTCTTCTGGGACACATCGAAATTGCAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | CCACACTTTTCCTATAAAAAGTTACACATCATCTCCTACTGGGACAGCTATCATCTTCGATTTCCCCATTaGCACACAAGCAATTATCGA | + |
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Preference number: 4 (lower is better) Translates to: PHFSYKKLHIISYWDSYHLRFPH*HTSNYR Trigger: TCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAG...ATGATAGCTGTCCCAGTAGGAGATGATGTGTAACTTTTTATAGGAAAAGTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| 3UTR CAA 72 bp | AGAACCCAGAACTTCTACAGAATAGAAAACCCACCCTaGCTTATTTGCATGAAAATACCACCCACTAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: RTQNFYRIENPP*LICMKIPPTKL Trigger: TAGCTTAGTGGGTGGTATTTTCATGCAAATAAGCAAGGGTGGGTTTTCTATTCTGTAGAAGTTCTGGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | TGTGTCCCAGAAGAGAGGCAAAATACGTATGCTGATGCTAAGTTTAAAAAGAAACTTCGATTTCCCCATTaGCACACAAGCAATTATCGA | + |
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Preference number: 4 (lower is better) Translates to: CVPEERQNTYADAKFKKKLRFPH*HTSNYR Trigger: TCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAG...TTTCTTTTTAAACTTAGCATCAGCATACGTATTTTGCCTCTCTTCTGGGACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | AACCAGCTTTATCATTCAAAAGACTACTGCCATTTCATATTACAGCTGAGTGTACTTCGATTTCCCCATTaGCACACAAGCAATTATCGA | + |
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Preference number: 4 (lower is better) Translates to: NQLYHSKDYCHFILQLSVLRFPH*HTSNYR Trigger: TCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAG...TACACTCAGCTGTAATATGAAATGGCAGTAGTCTTTTGAATGATAAAGCTGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 |
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| CDS-3UTR TCA 90 bp | AGACTAGCAAATCTTAACCGGAATGGTAAGGCCAAAATAGTAAAACCACACTTTGCGCTTCTACTGTACTaGGATCTTTTATTTTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RLANLNRNGKAKIVKPHFALLLY*DLLFCF Trigger: GAAACAAAATAAAAGATCTCAGTACAGTAGAAGCGC...AAAGTGTGGTTTTACTATTTTGGCCTTACCATTCCGGTTAAGATTTGCTAGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 |
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| CDS-3UTR TCA 90 bp | CCTATAAAAAGTTACACATCATCTCCTACTGGGACAGCTATCATACATAAAGAATCGTCCTCTTCATCCTaGATTTCGTCTTTCATTAAG | + |
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Preference number: 4 (lower is better) Translates to: PIKSYTSSPTGTAIIHKESSSSS*ISSFIK Trigger: CTTAATGAAAGACGAAATTCAGGATGAAGAGGACGA...TTCTTTATGTATGATAGCTGTCCCAGTAGGAGATGATGTGTAACTTTTTATAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000169426.8 ENSMUST00000171368.8 |
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| CDS CCA 72 bp | CATCGTCCTCTTCATCCTTCCGGAGTTTATTCAAGCTaGGAAGCCGGGCCAAGGAACTCAACTCCACGTTGG | + |
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Preference number: 6 (lower is better) Translates to: HRPLHPSGVYSS*EAGPRNSTPRW Trigger: CCAACGTGGAGTTGAGTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACTCCGGAAGGATGAAGAGGACGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170125.2 |
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| CDS CAA 72 bp | AAGCTGGGAAGCCGGGCCAAGGAACTCAACTCCACGTaGGCCATGCTAAGAAACTCCAGTTCCTTAAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: KLGSRAKELNST*AMLRNSSSLKV Trigger: CACCTTTAAGGAACTGGAGTTTCTTAGCATGGCCAACGTGGAGTTGAGTTCCTTGGCCCGGCTTCCCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS CAA 90 bp | AGTTTATTCAAGCTGGGAAGCCGGGCCAAGGAACTCAACTCCACGTaGGCCATGCTAAGAAACTCCAGTTCCTTAAAGGTGTCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SLFKLGSRAKELNST*AMLRNSSSLKVSFR Trigger: CCTGAATGACACCTTTAAGGAACTGGAGTTTCTTAGCATGGCCAACGTGGAGTTGAGTTCCTTGGCCCGGCTTCCCAGCTTGAATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS CAA 90 bp | AACTCCAGTTCCTTAAAGGTGTCATTCAGGCCTTCGATTTCCCCATaGACACACAAGCAATTATCGAGGACTAACTCTGTCACCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NSSSLKVSFRPSISP*THKQLSRTNSVTSS Trigger: GGAGGAGGTGACAGAGTTAGTCCTCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAGGCCTGAATGACACCTTTAAGGAACTGGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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| CDS TCA 72 bp | CTTCGTTGTCCTCCTGGTCGAATCCGTCCAGGTAGGTaGTCTGCTGCAGCAGTTCAAAAATACTTTCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: LRCPPGRIRPGR*SAAAVQKYFLY Trigger: ATAGAGAAAGTATTTTTGAACTGCTGCAGCAGATCACCTACCTGGACGGATTCGACCAGGAGGACAACGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000167876.3 ENSMUST00000168106.8 ENSMUST00000171035.8 |
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| CDS CAA 72 bp | TCCTTAAAGGTGTCATTCAGGCCTTCGATTTCCCCATaGACACACAAGCAATTATCGAGGACTAACTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SLKVSFRPSISP*THKQLSRTNSV Trigger: GACAGAGTTAGTCCTCGATAATTGCTTGTGTGTCAATGGGGAAATCGAAGGCCTGAATGACACCTTTAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000015893.13 ENSMUST00000165307.8 ENSMUST00000168106.8 ENSMUST00000170125.2 |
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