Pregenerated sensors for ANP32A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032249Ensembl transcript IDs: ENSMUST00000085519.13, ENSMUST00000128636.8
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAGTCACCTGGCAGAGGCCAGCCACGGCCTCCCGATCAACTCTaGGGATGTAGGACATACCAGAAAATGTTAGACCTCCAAGCCATC | + |
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Preference number: 1 (lower is better) Translates to: CESPGRGQPRPPDQL*GCRTYQKMLDLQAI Trigger: GATGGCTTGGAGGTCTAACATTTTCTGGTATGTCCTACATCCCCAGAGTTGATCGGGAGGCCGTGGCTGGCCTCTGCCAGGTGACTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR GCA 90 bp | GTTAGACCTCCAAGCCATCCTCTCCAGAGAGTAAGAACAAACACTTaGTTGGTGTGCACTAAGCTATTGCATTTATGGGGACAAAACCAG | + |
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Preference number: 1 (lower is better) Translates to: VRPPSHPLQRVRTNT*LVCTKLLHLWGQNQ Trigger: CTGGTTTTGTCCCCATAAATGCAATAGCTTAGTGCACACCAAGCAAGTGTTTGTTCTTACTCTCTGGAGAGGATGGCTTGGAGGTCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCGGGATCATAGCCCCAGAGTAATAAGAGTTCTCTTTGCAAAAAGCAAAGCCTACAAACCGGGGTGCTaGGTGCCTCTGGCAGCGACC | + |
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Preference number: 2 (lower is better) Translates to: SRDHSPRVIRVLFAKSKAYKPGC*VPLAAT Trigger: GGTCGCTGCCAGAGGCACCCAGCACCCCGGTTTGTA...GGCTTTGCTTTTTGCAAAGAGAACTCTTATTACTCTGGGGCTATGATCCCGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR CCA 90 bp | CGAACCGGAACCAGAACAGGAGTTAGTGAAGATGACAGGGGCTGTGAGTCACCTGAACAAACACTTGCTTaGTGTGCACTAAGCTATTGC | + |
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Preference number: 2 (lower is better) Translates to: RTGTRTGVSEDDRGCESPEQTLA*CALSYC Trigger: GCAATAGCTTAGTGCACACCAAGCAAGTGTTTGTTC...AGGTGACTCACAGCCCCTGTCATCTTCACTAACTCCTGTTCTGGTTCCGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR GCA 90 bp | GGAACCAGAACAGGAGTTAGTGAAGATGACAGGGGCTGTGAGTCACCTGGCAGATGTGCACTAAGCTATTaGATTTATGGGGACAAAACC | + |
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Preference number: 2 (lower is better) Translates to: GTRTGVSEDDRGCESPGRCALSY*IYGDKT Trigger: GGTTTTGTCCCCATAAATGCAATAGCTTAGTGCACA...TCTGCCAGGTGACTCACAGCCCCTGTCATCTTCACTAACTCCTGTTCTGGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR CAA 90 bp | AGACCTCCAAGCCATCCTCTCCAGAGAGTAAGAACAAACACTTGCTaGGTGTGCACTAAGCTATTGCATTTATGGGGACAAAACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: RPPSHPLQRVRTNTC*VCTKLLHLWGQNQT Trigger: TGTCTGGTTTTGTCCCCATAAATGCAATAGCTTAGTGCACACCAAGCAAGTGTTTGTTCTTACTCTCTGGAGAGGATGGCTTGGAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR GCA 90 bp | CGGGATCATAGCCCCAGAGTAATAAGAGTTCTCTTTGCAAAAAGCAAAGCCCACAACACTTGCTTGGTGTaGACTAAGCTATTGCATTTA | + |
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Preference number: 2 (lower is better) Translates to: RDHSPRVIRVLFAKSKAHNTCLV*TKLLHL Trigger: TAAATGCAATAGCTTAGTGCACACCAAGCAAGTGTT...GTGGGCTTTGCTTTTTGCAAAGAGAACTCTTATTACTCTGGGGCTATGATCCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR CCA 90 bp | TCTCGGGATCATAGCCCCAGAGTAATAAGAGTTCTCTTTGCAAAAAGCAAAGCCAAGCTATTGCATTTATaGGGACAAAACCAGACACAA | + |
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Preference number: 2 (lower is better) Translates to: SRDHSPRVIRVLFAKSKAKLLHL*GQNQTQ Trigger: TTGTGTCTGGTTTTGTCCCCATAAATGCAATAGCTT...GGCTTTGCTTTTTGCAAAGAGAACTCTTATTACTCTGGGGCTATGATCCCGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR-3UTR CAA 90 bp | ACCACACGAACCGGAACCAGAACAGGAGTTAGTGAAGATGACAGGGGCTGTGAGGTGTGCACTAAGCTATaGCATTTATGGGGACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: TTRTGTRTGVSEDDRGCEVCTKL*HLWGQN Trigger: GTTTTGTCCCCATAAATGCAATAGCTTAGTGCACAC...CTCACAGCCCCTGTCATCTTCACTAACTCCTGTTCTGGTTCCGGTTCGTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR GCA 72 bp | CCGGGTAAGAAAATACGAGTTTGCATTCCTTTCCTGTaGTCCAATGTATGTGAGAAGGAAAACAAGCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: PGKKIRVCIPFL*SNVCEKENKQN Trigger: GTTCTGCTTGTTTTCCTTCTCACATACATTGGAGCACAGGAAAGGAATGCAAACTCGTATTTTCTTACCCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS-3UTR TCA 90 bp | TGTGAGTCACCTGGCAGAGGCCAGCCACGGCCTCCCGATCAACTCTGGGGATGTACAGGTCTAGGCTCTTaGGATTCTCTAACTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CESPGRGQPRPPDQLWGCTGLGS*DSLTSS Trigger: TGAAGAAGTTAGAGAATCTCAAGAGCCTAGACCTGT...ACATCCCCAGAGTTGATCGGGAGGCCGTGGCTGGCCTCTGCCAGGTGACTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR CAA 72 bp | GGCTCTTCTCAAGGGCGGGAGAAAAATGAGTGGCAGTaGTTCTGTACCAATGAGACGCAGGGTAGGAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: GSSQGREKNEWQ*FCTNETQGRRD Trigger: GTCCCTCCTACCCTGCGTCTCATTGGTACAGAACAACTGCCACTCATTTTTCTCCCGCCCTTGAGAAGAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS-3UTR CCA 90 bp | CGAACCGGAACCAGAACAGGAGTTAGTGAAGATGACAGGGGCTGTGAGTCACCTTCATCTTCCACTAGCTaGGCATATTCATCATACTCC | + |
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Preference number: 4 (lower is better) Translates to: RTGTRTGVSEDDRGCESPSSSTS*AYSSYS Trigger: GGAGTATGATGAATATGCCCAGCTAGTGGAAGATGA...AGGTGACTCACAGCCCCTGTCATCTTCACTAACTCCTGTTCTGGTTCCGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| 3UTR CAA 72 bp | AGCCATCCTCTCCAGAGAGTAAGAACAAACACTTGCTaGGTGTGCACTAAGCTATTGCATTTATGGGGACAA | + |
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Preference number: 4 (lower is better) Translates to: SHPLQRVRTNTC*VCTKLLHLWGQ Trigger: TTGTCCCCATAAATGCAATAGCTTAGTGCACACCAAGCAAGTGTTTGTTCTTACTCTCTGGAGAGGATGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS-3UTR TCA 90 bp | CGGGATCATAGCCCCAGAGTAATAAGAGTTCTCTTTGCAAAAAGCAAAGCCCACGATTTTGCCTTCAATTaGCTTACAGTTATCCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RDHSPRVIRVLFAKSKAHDFAFN*LTVIQD Trigger: GTCCTGGATAACTGTAAGTCAATTGAAGGCAAAATC...GTGGGCTTTGCTTTTTGCAAAGAGAACTCTTATTACTCTGGGGCTATGATCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS-3UTR CAA 90 bp | CGAACCGGAACCAGAACAGGAGTTAGTGAAGATGACAGGGGCTGTGAGTCACCTAACAGGTCTAGGCTCTaGAGATTCTCTAACTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RTGTRTGVSEDDRGCESPNRSRL*RFSNFF Trigger: GAAGAAGTTAGAGAATCTCAAGAGCCTAGACCTGTT...AGGTGACTCACAGCCCCTGTCATCTTCACTAACTCCTGTTCTGGTTCCGGTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS-3UTR CAA 90 bp | CGGGATCATAGCCCCAGAGTAATAAGAGTTCTCTTTGCAAAAAGCAAAGCCCACCGATTTTGCCTTCAATaGACTTACAGTTATCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RDHSPRVIRVLFAKSKAHRFCLQ*TYSYPG Trigger: TCCTGGATAACTGTAAGTCAATTGAAGGCAAAATCG...GTGGGCTTTGCTTTTTGCAAAGAGAACTCTTATTACTCTGGGGCTATGATCCCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085519.13 |
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| CDS CAA 72 bp | ACAGTTATCCAGGACCAGCTCTTTCACCCCTTTTTGTaGTTTAATCCAGGAGGCAGCCCATCTTCTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: TVIQDQLFHPFL*FNPGGSPSSPP Trigger: GGGAGGAGAAGATGGGCTGCCTCCTGGATTAAACAACAAAAAGGGGTGAAAGAGCTGGTCCTGGATAACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128636.8 |
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| CDS CAA 72 bp | CTTACAGTTATCCAGGACCAGCTCTTTCACCCCTTTTaGTTGTTTAATCCAGGAGGCAGCCCATCTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LTVIQDQLFHPF*LFNPGGSPSSP Trigger: AGGAGAAGATGGGCTGCCTCCTGGATTAAACAACAAAAAGGGGTGAAAGAGCTGGTCCTGGATAACTGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128636.8 |
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