RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034863

Ensembl transcript IDs: ENSMUST00000093450.6, ENSMUST00000213382.2

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTaGGGAGGGAGAGCGCGGTTC +
Preference number: 2 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRRRGGP*GGRARF
Trigger: GAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
3UTR-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGAGGCGAGGCGGACCCTaGGGAGGGAGAGCGCGGTTC +
Preference number: 2 (lower is better)
Translates to: GERQGRGGASGGLWASRQRRGGP*GGRARF
Trigger: GAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCT...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
3UTR GCA 72 bp CCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTaGGGAGGGAGAGCGCGGTTCGCAGGGCCCCACGGC +
Preference number: 3 (lower is better)
Translates to: PAPTASRRRGGP*GGRARFAGPHG
Trigger: GCCGTGGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGGCCTGGGCCTCCAAGTaGCGTCGGGGATCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRAWASK*RRGSGR
Trigger: GCGCCCGGATCCCCGACGGCACTTGGAGGCCCAGGC...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCACCGCCCAGGCACCTaGGGCTCCCAGCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSHRPGT*GSQLRP
Trigger: AGGGCGGAGCTGGGAGCCGCAGGTGCCTGGGCGGTG...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCCACCGCCCAGGCACCTaGGGCTCCCAGCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGHRPGT*GSQLRP
Trigger: AGGGCGGAGCTGGGAGCCGCAGGTGCCTGGGCGGTG...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCCCCGCTGCCCAGCCTaGGGTACAGGTGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRPRCPA*GTGAAA
Trigger: TGCAGCCGCACCTGTACCGCAGGCTGGGCAGCGGGG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCTGGCCTGCGCCGCCCTaGGCCCCGCTCAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPWPAPP*APLSKA
Trigger: AGCTTTGCTGAGCGGGGCGCAGGGCGGCGCAGGCCA...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGGCTCTGGCCCGGGACTaGCTGGAGGCCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRALARD*LEAPQA
Trigger: AGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGC...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCCTCCAAGAGGCCGTCTaGGCTGGGGCCTGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGLQEAV*AGAWPA
Trigger: CGCAGGCCAGGCCCCAGCCCAGACGGCCTCTTGGAG...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCTCCAAGAGGCCGTCTaGGCTGGGGCCTGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQLQEAV*AGAWPA
Trigger: CGCAGGCCAGGCCCCAGCCCAGACGGCCTCTTGGAG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCAGCCCAGCTCCCCGCTaGCCAGCCTGCGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGSPAPR*PACGTG
Trigger: ACCTGTACCGCAGGCTGGGCAGCGGGGAGCTGGGCT...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCTCCCCTCCTTCCCCTaGTGGCCTCCGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRLPSFP*WPPLHS
Trigger: GCTGTGGAGCGGAGGCCAGCAGGGGAAGGAGGGGAG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCTCGCGCGCCGAGAATaGGAACAGCTTCCCGGGCCG +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQLARRE*EQLPGP
Trigger: CGGCCCGGGAAGCTGTTCGCATTCTCGGCGCGCGAG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCCGCCCTCATCAGCCTaGGCCTCCAAGTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQPPSSA*ASKCRR
Trigger: CCGACGGCACTTGGAGGCCCAGGCTGATGAGGGCGG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCTCATTCTCCTCCTCTaGCGCCCCGCAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPLILLL*RPAATA
Trigger: GGCGGTGGCTGCGGGGCGCCAGAGGAGGAGAATGAG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCTCATTCTCCTCCTCTaGCGCCCCGCAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQLILLL*RPAATA
Trigger: GGCGGTGGCTGCGGGGCGCCAGAGGAGGAGAATGAG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGACAGTCTGGGGCTCTaGCCCGGGACTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPDSLGL*PGTAWR
Trigger: CCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCGGCCTTCACGGCCTTaGGCAGACCCAGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRRPSRP*ADPAHR
Trigger: CCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCCCCGCTGCCCAGCCTaGGGTACAGGTGCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSPRCPA*GTGAAA
Trigger: TGCAGCCGCACCTGTACCGCAGGCTGGGCAGCGGGG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTAGCCCAGCTCCCCGCTaGCCAGCCTGCGGTACAGGT +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPSPAPR*PACGTG
Trigger: ACCTGTACCGCAGGCTGGGCAGCGGGGAGCTGGGCT...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGCCTGGGCCTCCAAGTaGCGTCGGGGATCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQAWASK*RRGSGR
Trigger: GCGCCCGGATCCCCGACGGCACTTGGAGGCCCAGGC...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCTCCCCTCCTTCCCCTaGTGGCCTCCGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPLPSFP*WPPLHS
Trigger: GCTGTGGAGCGGAGGCCAGCAGGGGAAGGAGGGGAG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGAGCACCGCCTGCAACTaGCGCTCGAGGCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQSTACN*RSRLWV
Trigger: GACCCAGAGCCTCGAGCGGCAGTTGCAGGCGGTGCT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCCTGAACTGGGGACGTaGCTCCTCCACAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQPELGT*LLHSLP
Trigger: GGGGAGGCTGTGGAGGAGCCACGTCCCCAGTTCAGG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCCGCCCTCATCAGCCTaGGCCTCCAAGTGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPPPSSA*ASKCRR
Trigger: CCGACGGCACTTGGAGGCCCAGGCTGATGAGGGCGG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGACAGTCTGGGGCTCTaGCCCGGGACTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPDSLGL*PGTAWR
Trigger: CCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTC...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGACCTCGCGCACGTTCTaGAGCAGCTGCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQTSRTF*SSCRVM
Trigger: CATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGT...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGTGGCCTGCGCCGCCCTaGGCCCCGCTCAGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQWPAPP*APLSKA
Trigger: AGCTTTGCTGAGCGGGGCGCAGGGCGGCGCAGGCCA...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGCTCTGGCCCGGGACTaGCTGGAGGCCCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQALARD*LEAPQA
Trigger: AGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGC...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGGTGAGCTGCGGTGAATaGTCCTCCTCTGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRVSCGE*SSSGGS
Trigger: CGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCAC...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGTGAGCTGCGGTGAATaGTCCTCCTCTGGCGGGTCG +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGVSCGE*SSSGGS
Trigger: CGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCAC...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCGGCCAAAGGGCCTCTaGAGGCCAGTGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQRPKGL*RPVQSL
Trigger: CAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGTTAAGGCCTGTGACCTaGGTCCTCCGGCCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRLRPVT*VLRPRF
Trigger: GAACCGCGGCCGGAGGACGCAGGTCACAGGCCTTAA...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGTTAAGGCCTGTGACCTaGGTCCTCCGGCCGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQLRPVT*VLRPRF
Trigger: GAACCGCGGCCGGAGGACGCAGGTCACAGGCCTTAA...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGGGACCAGCACCGCCTaGAACTGCCGCTCGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSGTSTA*NCRSRL
Trigger: GAGCCTCGAGCGGCAGTTGCAGGCGGTGCTGGTCCC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCGCGTGTGGCGGTGGTaGCGAACTTGCACGATCAGC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRRVWRW*RTCTIS
Trigger: GCTGATCGTGCAAGTTCGCCACCACCGCCACACGCG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGGCACGCGTGTGGCGGTaGTGGCGAACTTGCACGATC +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQARVWR*WRTCTI
Trigger: GATCGTGCAAGTTCGCCACCACCGCCACACGCGTGC...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCGGATGCCCCTGAACTaGGGACGTGGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRRMPLN*GRGSST
Trigger: TGTGGAGGAGCCACGTCCCCAGTTCAGGGGCATCCG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCGGATGCCCCTGAACTaGGGACGTGGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPRMPLN*GRGSST
Trigger: TGTGGAGGAGCCACGTCCCCAGTTCAGGGGCATCCG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGCACAGGGCGGCCAGTaGGAAGGCAGAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPAQGGQ*EGRGEE
Trigger: CTCTTCTCCTCTGCCTTCCCACTGGCCGCCCTGTGC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGGCACAGGGCGGCCAGTaGGAAGGCAGAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRAQGGQ*EGRGEE
Trigger: CTCTTCTCCTCTGCCTTCCCACTGGCCGCCCTGTGC...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCTGCCGCTCGAGGCTCTaGGTCAGGGACAGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPCRSRL*VRDRSS
Trigger: GCTACTCCTGTCCCTGACCCAGAGCCTCGAGCGGCA...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGATGCCCACCCGGATGTaGTTCAGCAGCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQMPTRM*FSSHSS
Trigger: GCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCAT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGTCTCAATCAGGTTGTTaGCGAGGGCGCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQSQSGC*RGRTGR
Trigger: CCGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGA...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCACCCATCGCCTCCATaGCCTTCTGCCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQHPSPP*PSATGQ
Trigger: TTGGCCAGTGGCAGAAGGTCATGGAGGCGATGGGTG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCGGCCTTCACGGCCTTaGGCAGACCCAGCTCATCGG +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRPSRP*ADPAHR
Trigger: CCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTACCTCGCGCACGTTCTaGAGCAGCTGCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPTSRTF*SSCRVM
Trigger: CATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGT...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCGGTACAGGTGCGGCTaGAGCACCTCGCGCACGTTC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRYRCG*STSRTF
Trigger: GAACGTGCGCGAGGTGCTGCAGCCGCACCTGTACCG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCCTCCGCTCCACAGCTaGCTCCTCCTCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQPPLHS*LLLLLI
Trigger: AATGAGGAGGAGGAGGAGGCAGCTGTGGAGCGGAGG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGAGCCTCCCCCTGCTTaGCTCGAAGGTTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSEPPPA*LEGSAT
Trigger: GGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTC...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGGAGCCTCCCCCTGCTTaGCTCGAAGGTTCTGCAACC +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQEPPPA*LEGSAT
Trigger: GGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTC...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGACCCCGAGGCCCTTCTaGAACCTCCCCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSTPRPF*NLPSFP
Trigger: GGGGAAGGAGGGGAGGTTCCAGAAGGGCCTCGGGGT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGAACAGGCGCTGCAGCTaGCCACACTGGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQNRRCS*PHWPMR
Trigger: CCTCATTGGCCAGTGTGGCCAGCTGCAGCGCCTGTT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGTGTCTGGGAAGGTCATaGGCACGTCGCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQCLGRS*ARRSPQ
Trigger: CTGAGGACTGCGACGTGCTCATGACCTTCCCAGACA...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTTCTCAATCAGGTTGTTaGCGAGGGCGCACAGGGCGG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPSQSGC*RGRTGR
Trigger: CCGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGA...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCACCCATCGCCTCCATaGCCTTCTGCCACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPHPSPP*PSATGQ
Trigger: TTGGCCAGTGGCAGAAGGTCATGGAGGCGATGGGTG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCTTCGCAGGAGAAGCTaGGGGTGCCCCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRLRRRS*GCPLQI
Trigger: AATTTGGAGGGGGCACCCGCAGCTTCTCCTGCGAAG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCACGTTCTGCAGCAGCTaGCGGGTGATGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSTFCSS*RVMSRV
Trigger: CACCCTACTCATCACCCGGCAGCTGCTGCAGAACGT...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCTCTGCCTGCGTGAGCTaGGGTGAATGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPSACVS*GECSSS
Trigger: AGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGA...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGTCTGCCTGCGTGAGCTaGGGTGAATGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQSACVS*GECSSS
Trigger: AGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGA...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCGGCCAAAGGGCCTCTaGAGGCCAGTGCAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRPKGL*RPVQSL
Trigger: CAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGCCTCCATGACCTTCTaGCACTGGCCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGASMTF*HWPMLS
Trigger: GGAGAGCATTGGCCAGTGGCAGAAGGTCATGGAGGC...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGGCCTCCATGACCTTCTaGCACTGGCCAATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQASMTF*HWPMLS
Trigger: GGAGAGCATTGGCCAGTGGCAGAAGGTCATGGAGGC...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGCACGCGTGTGGCGGTaGTGGCGAACTTGCACGATC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSARVWR*WRTCTI
Trigger: GATCGTGCAAGTTCGCCACCACCGCCACACGCGTGC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGCCTGAACTGGGGACGTaGCTCCTCCACAGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQPELGT*LLHSLP
Trigger: GGGGAGGCTGTGGAGGAGCCACGTCCCCAGTTCAGG...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGATGCCCACCCGGATGTaGTTCAGCAGCCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSMPTRM*FSSHSS
Trigger: GCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCAT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGCCGCTCCTGCGATGTaGAGAAGCGTAGCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSAAPAM*RSVARS
Trigger: AGAGCGAGCTACGCTTCTTCACATCGCAGGAGCGGC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGGCCAGTGCAGAGCTTaGAGGCATCACTTCGGATCT +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSGQCRA*RHHFGS
Trigger: AGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCC...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGGGCCACACTGGCCAATaGGGTAGCAGTTTACCACGA +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQGHTGQ*GSSLPR
Trigger: TCGTGGTAAACTGCTACCTCATTGGCCAGTGTGGCC...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGATCAGCTCGGGAATaGCCACCCGGATGTGATTCA +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQRSARE*PPGCDS
Trigger: TGAATCACATCCGGGTGGGCATTCCCGAGCTGATCG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCGATCAGCTCGGGAATaGCCACCCGGATGTGATTCA +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPRSARE*PPGCDS
Trigger: TGAATCACATCCGGGTGGGCATTCCCGAGCTGATCG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCTTCGCAGGAGAAGCTaGGGGTGCCCCCTCCAAATT +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPLRRRS*GCPLQI
Trigger: AATTTGGAGGGGGCACCCGCAGCTTCTCCTGCGAAG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCATGCTCTGCCGCTCCTaGGATGTGAAGAAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGMLCRS*DVKKRS
Trigger: GCTACGCTTCTTCACATCGCAGGAGCGGCAGAGCAT...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCATGCTCTGCCGCTCCTaGGATGTGAAGAAGCGTAGC +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSMLCRS*DVKKRS
Trigger: GCTACGCTTCTTCACATCGCAGGAGCGGCAGAGCAT...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCCTCCGCTCCACAGCTaGCTCCTCCTCCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSPPLHS*LLLLLI
Trigger: AATGAGGAGGAGGAGGAGGCAGCTGTGGAGCGGAGG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCGTCGCAGTCCTCAGTaGGCACTGTCTTCATCCATG +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPRRSPQ*ALSSSM
Trigger: CATGGATGAAGACAGTGCCCACTGAGGACTGCGACG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCAGCTCCGGAATGATTaGCTGGTCCTCCAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRQLRND*LVLQEA
Trigger: CGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCATGACCTTCTGCCACTaGCCAATGCTCTCCACACGC +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGMTFCH*PMLSTR
Trigger: GCGTGTGGAGAGCATTGGCCAGTGGCAGAAGGTCAT...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGCACAGAGGCAGGCTaGCAAGTAGTTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGGTEAG*QVVGKA
Trigger: TGCTTTTCCAACTACTTGTCAGCCTGCCTCTGTGCC...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGGCACAGAGGCAGGCTaGCAAGTAGTTGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPGTEAG*QVVGKA
Trigger: TGCTTTTCCAACTACTTGTCAGCCTGCCTCTGTGCC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGGCCAGTGCAGAGCTTaGAGGCATCACTTCGGATCT +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPGQCRA*RHHFGS
Trigger: AGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCC...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCTGTATGATGCCTCGTaGAGCCAGCTCCGGAATGAT +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPLYDAS*SQLRND
Trigger: ATCATTCCGGAGCTGGCTGCACGAGGCATCATACAG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCTGTATGATGCCTCGTaGAGCCAGCTCCGGAATGAT +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSLYDAS*SQLRND
Trigger: ATCATTCCGGAGCTGGCTGCACGAGGCATCATACAG...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGTGCCTCTCGTAGGTaGTCTCTAGCCGGTAATTCT +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGGASRR*SLAGNS
Trigger: AGAATTACCGGCTAGAGAGCACCTACGAGAGGCACC...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGACGTTCTGCAGCAGCTaGCGGGTGATGAGTAGGGTG +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSTFCSS*RVMSRV
Trigger: CACCCTACTCATCACCCGGCAGCTGCTGCAGAACGT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGTCATCAGTGGTGTCTaGGAAGGTCATGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPVISGV*EGHEHV
Trigger: GACGTGCTCATGACCTTCCCAGACACCACTGATGAC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCAGCTCCGGAATGATTaGCTGGTCCTCCAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPQLRND*LVLQEA
Trigger: CGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCCAATCGCTTCCAGGGTaGGTAGTAGAACTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGQSLPG*VVELLS
Trigger: GCTGAGGAGTTCTACTACCCACCCTGGAAGCGATTG...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGACTAGCTCCTGCAGCTaGAAGCAGCCAAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRTSSCS*KQPSIS
Trigger: ACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGAACAGGCGCTGCAGCTaGCCACACTGGCCAATGAGG +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQNRRCS*PHWPMR
Trigger: CCTCATTGGCCAGTGTGGCCAGCTGCAGCGCCTGTT...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGTGTCTGGGAAGGTCATaGGCACGTCGCAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQCLGRS*ARRSPQ
Trigger: CTGAGGACTGCGACGTGCTCATGACCTTCCCAGACA...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGAAACACCTGCTGTATaGTGCCTCGTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSETPAV*CLVQPA
Trigger: AGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGAATACGCTGCTCGTaGACTGGAAACACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRRIRCS*TGNTCC
Trigger: ACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGGCACCCAGGACTTCATaGGACGATTCAGAATACGCT +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQAPRTS*DDSEYA
Trigger: AGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGC...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGCACCCAGGACTTCATaGGACGATTCAGAATACGCT +
Preference number: 4 (lower is better)
Translates to: GHGAGCRRSPRARPSANSAPRTS*DDSEYA
Trigger: AGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGC...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGGCCACACTGGCCAATaGGGTAGCAGTTTACCACGA +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSGHTGQ*GSSLPR
Trigger: TCGTGGTAAACTGCTACCTCATTGGCCAGTGTGGCC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCACTGTCTTCATCCATaGCTTGTGGGACACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRHCLHP*LVGHQV
Trigger: TACCTGGTGTCCCACAAGGCATGGATGAAGACAGTG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCACTGTCTTCATCCATaGCTTGTGGGACACCAGGTA +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQHCLHP*LVGHQV
Trigger: TACCTGGTGTCCCACAAGGCATGGATGAAGACAGTG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGCGGTGGTGGCGAACTTaGACGATCAGCTCGGGAATG +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQRWWRT*TISSGM
Trigger: CATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCG...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCGTCGCAGTCCTCAGTaGGCACTGTCTTCATCCATG +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRRSPQ*ALSSSM
Trigger: CATGGATGAAGACAGTGCCCACTGAGGACTGCGACG...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCAATCGCTTCCAGGGTaGGTAGTAGAACTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPQSLPG*VVELLS
Trigger: GCTGAGGAGTTCTACTACCCACCCTGGAAGCGATTG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGATGACCTTCTGCCACTaGCCAATGCTCTCCACACGC +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSMTFCH*PMLSTR
Trigger: GCGTGTGGAGAGCATTGGCCAGTGGCAGAAGGTCAT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGAAACACCTGCTGTATaGTGCCTCGTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQETPAV*CLVQPA
Trigger: AGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTC...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGTTGACCAGATCACATTaGAGAGAGCGAAGACCACAC +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQLTRSH*RERRPH
Trigger: GTGTGGTCTTCGCTCTCTTCAATGTGATCTGGTCAA...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGCCTCATACTTCTTCATaGAGCTCTCTAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQPHTSS*SSLALP
Trigger: AGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGG...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGCCTCATACTTCTTCATaGAGCTCTCTAGCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRPHTSS*SSLALP
Trigger: AGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGG...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCACGCTGCTCGTGAACTaGAAACACCTGCTGTATGAT +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPTLLVN*KHLLYD
Trigger: ATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGT...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGACTAGCTCCTGCAGCTaGAAGCAGCCAAGCATCAGT +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSTSSCS*KQPSIS
Trigger: ACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGAGAATACGCTGCTCGTaGACTGGAAACACCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRIRCS*TGNTCC
Trigger: ACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGTCTGATCAGCCTCAGTaGATGTATACAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRSDQPQ*MYTEQS
Trigger: GCTCTGTTCTGTATACATTCACTGAGGCTGATCAGA...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCTCTGATCAGCCTCAGTaGATGTATACAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGSDQPQ*MYTEQS
Trigger: GCTCTGTTCTGTATACATTCACTGAGGCTGATCAGA...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGGACTCAAGTACGAGTTaGCAAACTGGAACAAGACGA +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQDSSTS*QTGTRR
Trigger: TCGTCTTGTTCCAGTTTGTCAACTCGTACTTGAGTC...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGTCATCAGTGGTGTCTaGGAAGGTCATGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQVISGV*EGHEHV
Trigger: GACGTGCTCATGACCTTCCCAGACACCACTGATGAC...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTACGCTGCTCGTGAACTaGAAACACCTGCTGTATGAT +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPTLLVN*KHLLYD
Trigger: ATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGT...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGATATCATCTAAAGGCTaGTTTTCACACACGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRISSKG*FSHTAC
Trigger: GCAGGCCGTGTGTGAAAACCAGCCTTTAGATGATAT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGTCAGGGATGGCTACATaGATGAGGTACTTGACTAGA +
Preference number: 4 (lower is better)
Translates to: GERQGRGGASGGLWASRQSGMAT*MRYLTR
Trigger: TCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGA...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCTCAGGGATGGCTACATaGATGAGGTACTTGACTAGA +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPSGMAT*MRYLTR
Trigger: TCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGA...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGAACAGAGCCAAAAACTaGAGGATAAACCATTGCCGA +
Preference number: 4 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQNRAKN*RINHCR
Trigger: TCGGCAATGGTTTATCCTGCAGTTTTTGGCTCTGTT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR GCA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCAACAGAGCCAAAAACTaGAGGATAAACCATTGCCGA +
Preference number: 4 (lower is better)
Translates to: PAGGEADPAEGERGSQGPNRAKN*RINHCR
Trigger: TCGGCAATGGTTTATCCTGCAGTTTTTGGCTCTGTT...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CCA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTAGGCTGACAAGTAGTTaGAAAAGCAATCGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QPQGASQRQQPAGGEADPRLTSS*KSNRFQ
Trigger: CTGGAAGCGATTGCTTTTCCAACTACTTGTCAGCCT...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR TCA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGACTCAAGTACGAGTTaGCAAACTGGAACAAGACGA +
Preference number: 4 (lower is better)
Translates to: QQPAGGEADPAEGERGSQDSSTS*QTGTRR
Trigger: TCGTCTTGTTCCAGTTTGTCAACTCGTACTTGAGTC...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCTCCTCGTCCTCCTCCTaGCCACCCCGAGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGSSSSS*PPRGPS
Trigger: AGAAGGGCCTCGGGGTGGCAAGGAGGAGGACGAGGA...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGGTCTCCATCAGGACCTaGGTCACGGCCCTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQVSIRT*VTALAP
Trigger: AGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGAC...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGTCTCCATCAGGACCTaGGTCACGGCCCTCGCCCCT +
Preference number: 5 (lower is better)
Translates to: PAGGEADPAEGERGSQGPVSIRT*VTALAP
Trigger: AGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGAC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp CCTCCGCTCCACAGCTGCCTCCTCCTCCTCCTCATTCTCCTCCTCTaGCGCCCCGCAGCCACCGCCCAGGCACCTGCGGCTCCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPLHSCLLLLLILLL*RPAATAQAPAAPSS
Trigger: GGAGCTGGGAGCCGCAGGTGCCTGGGCGGTGGCTGCGGGGCGCCAGAGGAGGAGAATGAGGAGGAGGAGGAGGCAGCTGTGGAGCGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGTCCAAGAAGCGCACGTaGTGCAGAGCCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQSKKRT*CRASPC
Trigger: GCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGA...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCTCCAAGAAGCGCACGTaGTGCAGAGCCTCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGSKKRT*CRASPC
Trigger: GCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGA...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp CCTTGGTCACGGCCCTCGCCCCTCGCCCGACGAAGCAAGACAGTCTaGGGCTCTGGCCCGGGACTGCCTGGAGGCCCCTCAGGCTCATCG +
Preference number: 5 (lower is better)
Translates to: PWSRPSPLARRSKTV*GSGPGLPGGPSGSS
Trigger: CGATGAGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTCTTGCTTCGTCGGGCGAGGGGCGAGGGCCGTGACCAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGCGGTGGTGGCGAACTaGCACGATCAGCTCGGGAAT +
Preference number: 5 (lower is better)
Translates to: PAGGEADPAEGERGSQGPAVVAN*HDQLGN
Trigger: ATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCAGAGCCTCCCCCTGCTaGGCTCGAAGGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GHGAGCRRSPRARPSANSRASPC*ARRFCN
Trigger: GTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCT...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGAGAGCCTCCCCCTGCTaGGCTCGAAGGTTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQRASPC*ARRFCN
Trigger: GTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGTCCTCGTCCTCCTCCTaGCCACCCCGAGGCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RQQPAGGEADPAEGERGSSSSSS*PPRGPS
Trigger: AGAAGGGCCTCGGGGTGGCAAGGAGGAGGACGAGGA...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGTGGTGGCGAACTaGCACGATCAGCTCGGGAAT +
Preference number: 5 (lower is better)
Translates to: QPQGASQRQQPAGGEADPAVVAN*HDQLGN
Trigger: ATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGC...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGTCGGCCTTCACGGCCTaGCGCAGACCCAGCTCATCG +
Preference number: 5 (lower is better)
Translates to: QQPAGGEADPAEGERGSQSAFTA*RRPSSS
Trigger: CGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGA...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGATCTCAATCAGGTTGTaGACGAGGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRISIRL*TRAHRA
Trigger: CGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGAT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGATCTCAATCAGGTTGTaGACGAGGGCGCACAGGGCG +
Preference number: 5 (lower is better)
Translates to: GERQGRGGASGGLWASRQISIRL*TRAHRA
Trigger: CGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGAT...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGGATCTCAATCAGGTaGTTGACGAGGGCGCACAGG +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQRISIR*LTRAHR
Trigger: CCTGTGCGCCCTCGTCAACAACCTGATTGAGATCCG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCGCTGGTACTCCAGTTaGGCCATCTCCTCAGCTACC +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQRWYSS*AISSAT
Trigger: GGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCG...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp CCAGCTCCAGGATGGTTCGCAAGCCCAGCTCCCCGCTGCCCAGCCTaGGGTACAGGTGCGGCTGCAGCACCTCGCGCACGTTCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: PAPGWFASPAPRCPA*GTGAAAAPRARSAA
Trigger: TGCTGCAGAACGTGCGCGAGGTGCTGCAGCCGCACCTGTACCGCAGGCTGGGCAGCGGGGAGCTGGGCTTGCGAACCATCCTGGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCAGGGCTAGCATAACCTaGGGCAAGAAGCGAACCAGG +
Preference number: 5 (lower is better)
Translates to: PAGGEADPAEGERGSQGPRASIT*GKKRTR
Trigger: CCTGGTTCGCTTCTTGCCCAAGGTTATGCTAGCCCT...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGAGGGCTAGCATAACCTaGGGCAAGAAGCGAACCAGG +
Preference number: 5 (lower is better)
Translates to: GTRGGLSPQPQGASQRQQRASIT*GKKRTR
Trigger: CCTGGTTCGCTTCTTGCCCAAGGTTATGCTAGCCCT...CTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGGCAAAGCTGACCTTCTaGAGGCGCAGCCCGCAGTCT +
Preference number: 5 (lower is better)
Translates to: RQQPAGGEADPAEGERGSAKLTF*RRSPQS
Trigger: AGACTGCGGGCTGCGCCTCAAGAAGGTCAGCTTTGC...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGACACGGGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCAGGCCAGTGCAGAGCTaGAAGGCATCACTTCGGATC +
Preference number: 5 (lower is better)
Translates to: GHGAGCRRSPRARPSANSRPVQS*KASLRI
Trigger: GATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCT...GCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCCCGTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTCGCTGGTACTCCAGTTaGGCCATCTCCTCAGCTACC +
Preference number: 5 (lower is better)
Translates to: QPQGASQRQQPAGGEADPRWYSS*AISSAT
Trigger: GGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCG...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp CGGTACAGGTGCGGCTGCAGCACCTCGCGCACGTTCTGCAGCAGCTaGCGGGTGATGAGTAGGGTGGCCAGCATTTTGGCCCGGGCCACG +
Preference number: 5 (lower is better)
Translates to: RYRCGCSTSRTFCSS*RVMSRVASILARAT
Trigger: CGTGGCCCGGGCCAAAATGCTGGCCACCCTACTCATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGTGCTGCAGCCGCACCTGTACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTAGGCCAGTGCAGAGCTaGAAGGCATCACTTCGGATC +
Preference number: 5 (lower is better)
Translates to: QPQGASQRQQPAGGEADPRPVQS*KASLRI
Trigger: GATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCT...AGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp GCCGCGAGCGGGACCAGCACCGCCTGCAACTGCCGCTCGAGGCTCTaGGTCAGGGACAGGAGTAGCAGGAGCTCTTTTAGGCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: AASGTSTACNCRSRL*VRDRSSRSSFRRSM
Trigger: CATGGACCGCCTAAAAGAGCTCCTGCTACTCCTGTCCCTGACCCAGAGCCTCGAGCGGCAGTTGCAGGCGGTGCTGGTCCCGCTCGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCCTGCAGGATAAACCATaGCCGATGTGTAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: PAGGEADPAEGERGSQGPLQDKP*PMCRSP
Trigger: TGGGCTTCTACACATCGGCAATGGTTTATCCTGCAG...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGCGGATCTCAATCAGGTaGTTGACGAGGGCGCACAGG +
Preference number: 5 (lower is better)
Translates to: QQPAGGEADPAEGERGSQRISIR*LTRAHR
Trigger: CCTGTGCGCCCTCGTCAACAACCTGATTGAGATCCG...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp AGGAGAAGCTGCGGGTGCCCCCTCCAAATTCGGCCTTCACGGCCTTaGGCAGACCCAGCTCATCGGCCCCACGGAGCAGGCTCTCGTATG +
Preference number: 5 (lower is better)
Translates to: RRSCGCPLQIRPSRP*ADPAHRPHGAGSRM
Trigger: CATACGAGAGCCTGCTCCGTGGGGCCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGAATTTGGAGGGGGCACCCGCAGCTTCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp GCGTCGCCAGAGCCAGTCTCCGTATCTCGGTCTCCATCAGGACCTTaGTCACGGCCCTCGCCCCTCGCCCGACGAAGCAAGACAGTCTGG +
Preference number: 5 (lower is better)
Translates to: ASPEPVSVSRSPSGP*SRPSPLARRSKTVW
Trigger: CCAGACTGTCTTGCTTCGTCGGGCGAGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGACCGAGATACGGAGACTGGCTCTGGCGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp CGCTGCTGCGCCTGCCGCTCGTGCCGCTTGAAAGCTTCCCGTCGCTaGTACTCCAGTTTGGCCATCTCCTCAGCTACCCAGCCGGGGATG +
Preference number: 5 (lower is better)
Translates to: RCCACRSCRLKASRR*YSSLAISSATQPGM
Trigger: CATCCCCGGCTGGGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCAGGCGCAGCAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGGGCCCCGTTGACCAGATCACATaGAAGAGAGCGAAGACCACA +
Preference number: 5 (lower is better)
Translates to: PAGGEADPAEGERGSQGPVDQIT*KRAKTT
Trigger: TGTGGTCTTCGCTCTCTTCAATGTGATCTGGTCAAC...GGGGCCCTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGAGAACGGCAGGGGCGCGGCGGGGCTAGTGGCGGGCTGTGGGCCAGCAGGCAGGTTGACCAGATCACATaGAAGAGAGCGAAGACCACA +
Preference number: 5 (lower is better)
Translates to: GERQGRGGASGGLWASRQVDQIT*KRAKTT
Trigger: TGTGGTCTTCGCTCTCTTCAATGTGATCTGGTCAAC...CTGCCTGCTGGCCCACAGCCCGCCACTAGCCCCGCCGCGCCCCTGCCGTTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp GGGCGGGTTGTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGACATGGATGAGGTACTaGACTAGAAGAGCCAAGTGC +
Preference number: 5 (lower is better)
Translates to: GRVVAAAPGRVPAPTASRTWMRY*TRRAKC
Trigger: GCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGT...CCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGACAACCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp CGGTACAGGTGCGGCTGCAGCACCTCGCGCACGTTCTGCAGCAGCTaGCGGGTGATGAGTAGGGTGGCCAGCATCTCTTTTAGGCGGTCC +
Preference number: 5 (lower is better)
Translates to: RYRCGCSTSRTFCSS*RVMSRVASISFRRS
Trigger: GGACCGCCTAAAAGAGATGCTGGCCACCCTACTCATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGTGCTGCAGCCGCACCTGTACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093450.6
CDS-3UTR CAA 90 bp GTCGCCGCAGCCCCAGGGCGCGTCCCAGCGCCAACAGCCAGCAGGAGGCGAGGCAGACTCAAGTACGAGTaGACAAACTGGAACAAGACG +
Preference number: 5 (lower is better)
Translates to: VAAAPGRVPAPTASRRRGRLKYE*TNWNKT
Trigger: CGTCTTGTTCCAGTTTGTCAACTCGTACTTGAGTCT...GCCTCGCCTCCTGCTGGCTGTTGGCGCTGGGACGCGCCCTGGGGCTGCGGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp GACCCAGCTCATCGGCCCCACGGAGCAGGCTCTCGTATGTGGCGGTaGCAAAGAAGGCATAGGCACGCGTGTGGCGGTGGTGGCGAACTT +
Preference number: 5 (lower is better)
Translates to: DPAHRPHGAGSRMWR*QRRHRHACGGGGEL
Trigger: AAGTTCGCCACCACCGCCACACGCGTGCCTATGCCTTCTTTGTCACCGCCACATACGAGAGCCTGCTCCGTGGGGCCGATGAGCTGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp GCTGCTGCTGCTGAAAGCGCTGCTGCGCCTGCCGCTCGTGCCGCTTaGAAGCTTCCCGTCGCTGGTACTCCAGTTTGGCCATCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AAAAESAAAPAARAA*KLPVAGTPVWPSPQ
Trigger: CTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCAGGCGCAGCAGCGCTTTCAGCAGCAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGCAGCTGCAGGATAAACCATaGCCGATGTGTAGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: QQPAGGEADPAEGERGSQLQDKP*PMCRSP
Trigger: TGGGCTTCTACACATCGGCAATGGTTTATCCTGCAG...CTGCGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp CACGCGTGTGGCGGTGGTGGCGAACTTGCACGATCAGCTCGGGAATaGCCACCCGGATGTGATTCAGCAGCCACAGCAGCGTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: HACGGGGELARSARE*PPGCDSAATAACGH
Trigger: ATGACCACACGCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGCCACACGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS-3UTR CAA 90 bp CGCCAACAGCCAGCAGGAGGCGAGGCGGACCCTGCGGAGGGAGAGCGCGGTTCGAGACTCAAGTACGAGTaGACAAACTGGAACAAGACG +
Preference number: 5 (lower is better)
Translates to: RQQPAGGEADPAEGERGSRLKYE*TNWNKT
Trigger: CGTCTTGTTCCAGTTTGTCAACTCGTACTTGAGTCT...CGAACCGCGCTCTCCCTCCGCAGGGTCCGCCTCGCCTCCTGCTGGCTGTTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp TGGTGGCGAACTTGCACGATCAGCTCGGGAATGCCCACCCGGATGTaGTTCAGCAGCCACAGCAGCGTGTGGTCATCAGTGGTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: WWRTCTISSGMPTRM*FSSHSSVWSSVVSG
Trigger: CCCAGACACCACTGATGACCACACGCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGTTCGCCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp GCCAGCTCCGGAATGATTGGCTGGTCCTCCAAGAAGCGCACGTTGTaGAGAGCCTCCCCCTGCTTGGCTCGAAGGTTCTGCAACCAGAAG +
Preference number: 5 (lower is better)
Translates to: ASSGMIGWSSKKRTL*RASPCLARRFCNQK
Trigger: CTTCTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp AGGTGTCCTCATACTTCTTCATGCAGCTCTCTAGCTCTGCCTGCGTaGGCTGCGGTGAATGCTCCTCCTCTGGCGGGTCGATCCACGAGG +
Preference number: 5 (lower is better)
Translates to: RCPHTSSCSSLALPA*AAVNAPPLAGRSTR
Trigger: CCTCGTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGGACACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp AAGCGCACGTTGTGCAGAGCCTCCCCCTGCTTGGCTCGAAGGTTCTaGAACCAGAAGCGAATGATGCTCTGCCGCTCCTGCGATGTGAAG +
Preference number: 5 (lower is better)
Translates to: KRTLCRASPCLARRF*NQKRMMLCRSCDVK
Trigger: CTTCACATCGCAGGAGCGGCAGAGCATCATTCGCTTCTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp TTCTGCCACTGGCCAATGCTCTCCACACGCCGGCCAAAGGGCCTCTaGAGGCCAGTGCAGAGCTTGAAGGCATCACTTCGGATCTCAATC +
Preference number: 5 (lower is better)
Translates to: FCHWPMLSTRRPKGL*RPVQSLKASLRISI
Trigger: GATTGAGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCGGCGTGTGGAGAGCATTGGCCAGTGGCAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp ATTGGCTGGTCCTCCAAGAAGCGCACGTTGTGCAGAGCCTCCCCCTaGTTGGCTCGAAGGTTCTGCAACCAGAAGCGAATGATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: IGWSSKKRTLCRASP*LARRFCNQKRMMLC
Trigger: GCAGAGCATCATTCGCTTCTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp TGGAAGGTGTCCTCATACTTCTTCATGCAGCTCTCTAGCTCTGCCTaGGTGAGCTGCGGTGAATGCTCCTCCTCTGGCGGGTCGATCCAC +
Preference number: 5 (lower is better)
Translates to: WKVSSYFFMQLSSSA*VSCGECSSSGGSIH
Trigger: GTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGGACACCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp TTCTTCATGCAGCTCTCTAGCTCTGCCTGCGTGAGCTGCGGTGAATaGTCCTCCTCTGGCGGGTCGATCCACGAGGACCTGTTATGTCTT +
Preference number: 5 (lower is better)
Translates to: FFMQLSSSACVSCGE*SSSGGSIHEDLLCL
Trigger: AAGACATAACAGGTCCTCGTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp TCGGATCTCAATCAGGTTGTTGACGAGGGCGCACAGGGCGGCCAGTaGGAAGGCAGAGGAGAAGAGCACTACATAGCCAAACTGCACGAA +
Preference number: 5 (lower is better)
Translates to: SDLNQVVDEGAQGGQ*EGRGEEHYIAKLHE
Trigger: TTCGTGCAGTTTGGCTATGTAGTGCTCTTCTCCTCTGCCTTCCCACTGGCCGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGATCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp GCCATCTCCTCAGCTACCCAGCCGGGGATGTCAGGGATGGCTACATaGATGAGGTACTTGACTAGAAGAGCCAAGTGCTCTAGCACCACC +
Preference number: 5 (lower is better)
Translates to: AISSATQPGMSGMAT*MRYLTRRAKCSSTT
Trigger: GGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGACATCCCCGGCTGGGTAGCTGAGGAGATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp GCCTGCACCCAGGACTTCATGAGACGATTCAGAATACGCTGCTCGTaGACTGGAAACACCTGCTGTATGATGCCTCGTGCAGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ACTQDFMRRFRIRCS*TGNTCCMMPRAASS
Trigger: GGAGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp TCAGGGATGGCTACATGGATGAGGTACTTGACTAGAAGAGCCAAGTaGTCTAGCACCACCACAGATACAATGGCCGCCTCTGGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SGMATWMRYLTRRAK*SSTTTDTMAASGLS
Trigger: GCTGAGCCCAGAGGCGGCCATTGTATCTGTGGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp ACCAGGCGGGGCAGACCCTTCACACTCAAGACTAGCTCCTGCAGCTaGAAGCAGCCAAGCATCAGTATAAAGACACAGATAAGACAGGCC +
Preference number: 5 (lower is better)
Translates to: TRRGRPFTLKTSSCS*KQPSISIKTQIRQA
Trigger: GGCCTGTCTTATCTGTGTCTTTATACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGTCTTGAGTGTGAAGGGTCTGCCCCGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 90 bp CACCCAGGACTTCATGAGACGATTCAGAATACGCTGCTCGTGAACTaGAAACACCTGCTGTATGATGCCTCGTGCAGCCAGCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: HPGLHETIQNTLLVN*KHLLYDASCSQLRN
Trigger: ATTCCGGAGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp AAGCGAACCAGGCGGGGCAGACCCTTCACACTCAAGACTAGCTCCTaGAGCTGGAAGCAGCCAAGCATCAGTATAAAGACACAGATAAGA +
Preference number: 5 (lower is better)
Translates to: KRTRRGRPFTLKTSS*SWKQPSISIKTQIR
Trigger: TCTTATCTGTGTCTTTATACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGTCTTGAGTGTGAAGGGTCTGCCCCGCCTGGTTCGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp CATCTAAAGGCTGGTTTTCACACACGGCCTGCACCCAGGACTTCATaGGACGATTCAGAATACGCTGCTCGTGAACTGGAAACACCTGCT +
Preference number: 5 (lower is better)
Translates to: HLKAGFHTRPAPRTS*DDSEYAARELETPA
Trigger: AGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGCAGGCCGTGTGTGAAAACCAGCCTTTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 90 bp ACATTGAAGAGAGCGAAGACCACACAGGAAACATCCCGGCTTGTCTaGTCAGCCTCAGTGAATGTATACAGAACAGAGCCAAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: TLKRAKTTQETSRLV*SASVNVYRTEPKTA
Trigger: TGCAGTTTTTGGCTCTGTTCTGTATACATTCACTGAGGCTGATCAGACAAGCCGGGATGTTTCCTGTGTGGTCTTCGCTCTCTTCAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 90 bp TGTCTGATCAGCCTCAGTGAATGTATACAGAACAGAGCCAAAAACTaGAGGATAAACCATTGCCGATGTGTAGAAGCCCAGCCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: CLISLSECIQNRAKN*RINHCRCVEAQPGK
Trigger: TTTGCCTGGCTGGGCTTCTACACATCGGCAATGGTTTATCCTGCAGTTTTTGGCTCTGTTCTGTATACATTCACTGAGGCTGATCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp AACAGCTTCCCGGGCCGCGGCGGGGACGGGCCTCGCTCCGGAGCCTaGAGGAAGCGCAGGCTGAGGAAGGCGGGCAGGCGCGTGTCCGCG +
Preference number: 6 (lower is better)
Translates to: NSFPGRGGDGPRSGA*RKRRLRKAGRRVSA
Trigger: CGCGGACACGCGCCTGCCCGCCTTCCTCAGCCTGCGCTTCCTCAAGGCTCCGGAGCGAGGCCCGTCCCCGCCGCGGCCCGGGAAGCTGTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp GAGGCCGTCTGGGCTGGGGCCTGGCCTGCGCCGCCCTaGGCCCCGCTCAGCAAAGCTGACCTTCTTGAGGCG +
Preference number: 6 (lower is better)
Translates to: EAVWAGAWPAPP*APLSKADLLEA
Trigger: CGCCTCAAGAAGGTCAGCTTTGCTGAGCGGGGCGCAGGGCGGCGCAGGCCAGGCCCCAGCCCAGACGGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CGGAACCGCAGGGCCGCGAGCGGGACCAGCACCGCCTaGAACTGCCGCTCGAGGCTCTGGGTCAGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RNRRAASGTSTA*NCRSRLWVRDR
Trigger: CCTGTCCCTGACCCAGAGCCTCGAGCGGCAGTTGCAGGCGGTGCTGGTCCCGCTCGCGGCCCTGCGGTTCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS CCA 72 bp AGGCACCTGCGGCTCCCAGCTCCGCCCTCATCAGCCTaGGCCTCCAAGTGCCGTCGGGGATCCGGGCGCAAG +
Preference number: 6 (lower is better)
Translates to: RHLRLPAPPSSA*ASKCRRGSGRK
Trigger: CTTGCGCCCGGATCCCCGACGGCACTTGGAGGCCCAGGCTGATGAGGGCGGAGCTGGGAGCCGCAGGTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp CACAGCTGCCTCCTCCTCCTCCTCATTCTCCTCCTCTaGCGCCCCGCAGCCACCGCCCAGGCACCTGCGGCT +
Preference number: 6 (lower is better)
Translates to: HSCLLLLLILLL*RPAATAQAPAA
Trigger: AGCCGCAGGTGCCTGGGCGGTGGCTGCGGGGCGCCAGAGGAGGAGAATGAGGAGGAGGAGGAGGCAGCTGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp CCTGGCCTGCGCCGCCCTGCGCCCCGCTCAGCAAAGCTGACCTTCTaGAGGCGCAGCCCGCAGTCTAGGAGGCTTCCTTCCTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: PGLRRPAPRSAKLTF*RRSPQSRRLPSSPS
Trigger: CGAGGGCGAGGAAGGAAGCCTCCTAGACTGCGGGCTGCGCCTCAAGAAGGTCAGCTTTGCTGAGCGGGGCGCAGGGCGGCGCAGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp TGCGGGTGCCCCCTCCAAATTCGGCCTTCACGGCCTTaGGCAGACCCAGCTCATCGGCCCCACGGAGCAGGC +
Preference number: 6 (lower is better)
Translates to: CGCPLQIRPSRP*ADPAHRPHGAG
Trigger: GCCTGCTCCGTGGGGCCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGAATTTGGAGGGGGCACCCGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp CCGAGGCCCTTCTGGAACCTCCCCTCCTTCCCCTGCTaGCCTCCGCTCCACAGCTGCCTCCTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PRPFWNLPSFPC*PPLHSCLLLLL
Trigger: GAGGAGGAGGAGGAGGCAGCTGTGGAGCGGAGGCCAGCAGGGGAAGGAGGGGAGGTTCCAGAAGGGCCTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp CTGCGGGTGCCCCCTCCAAATTCGGCCTTCACGGCCTaGCGCAGACCCAGCTCATCGGCCCCACGGAGCAGG +
Preference number: 6 (lower is better)
Translates to: LRVPPPNSAFTA*RRPSSSAPRSR
Trigger: CCTGCTCCGTGGGGCCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGAATTTGGAGGGGGCACCCGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CGGTACAGGTGCGGCTGCAGCACCTCGCGCACGTTCTaGAGCAGCTGCCGGGTGATGAGTAGGGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: RYRCGCSTSRTF*SSCRVMSRVAS
Trigger: GCTGGCCACCCTACTCATCACCCGGCAGCTGCTGCAGAACGTGCGCGAGGTGCTGCAGCCGCACCTGTACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp CGCCGCCCTGCGCCCCGCTCAGCAAAGCTGACCTTCTaGAGGCGCAGCCCGCAGTCTAGGAGGCTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: RRPAPRSAKLTF*RRSPQSRRLPS
Trigger: GGAAGGAAGCCTCCTAGACTGCGGGCTGCGCCTCAAGAAGGTCAGCTTTGCTGAGCGGGGCGCAGGGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp CAGGAGAAGCTGCGGGTGCCCCCTCCAAATTCGGCCTTCACGGCCTaGCGCAGACCCAGCTCATCGGCCCCACGGAGCAGGCTCTCGTAT +
Preference number: 6 (lower is better)
Translates to: QEKLRVPPPNSAFTA*RRPSSSAPRSRLSY
Trigger: ATACGAGAGCCTGCTCCGTGGGGCCGATGAGCTGGGTCTGCGCAAGGCCGTGAAGGCCGAATTTGGAGGGGGCACCCGCAGCTTCTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp CGCGTCGCCAGAGCCAGTCTCCGTATCTCGGTCTCCATCAGGACCTaGGTCACGGCCCTCGCCCCTCGCCCGACGAAGCAAGACAGTCTG +
Preference number: 6 (lower is better)
Translates to: RVARASLRISVSIRT*VTALAPRPTKQDSL
Trigger: CAGACTGTCTTGCTTCGTCGGGCGAGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGACCGAGATACGGAGACTGGCTCTGGCGACGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CGTCTTCGTCGTCGTCCTCCTCCTCGTCCTCCTCCTTaGCACCCCGAGGCCCTTCTGGAACCTCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RLRRRPPPRPPP*HPEALLEPPLL
Trigger: AAGGAGGGGAGGTTCCAGAAGGGCCTCGGGGTGGCAAGGAGGAGGACGAGGAGGAGGACGACGACGAAGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp GACGAAGCAAGACAGTCTGGGGCTCTGGCCCGGGACTaGCTGGAGGCCCCTCAGGCTCATCGTCTTCTTCGG +
Preference number: 6 (lower is better)
Translates to: DEARQSGALARD*LEAPQAHRLLR
Trigger: CCGAAGAAGACGATGAGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTCTTGCTTCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp AAGCAAGACAGTCTGGGGCTCTGGCCCGGGACTGCCTaGAGGCCCCTCAGGCTCATCGTCTTCTTCGGCCAG +
Preference number: 6 (lower is better)
Translates to: KQDSLGLWPGTA*RPLRLIVFFGQ
Trigger: CTGGCCGAAGAAGACGATGAGCCTGAGGGGCCTCCAGGCAGTCCCGGGCCAGAGCCCCAGACTGTCTTGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp GAGCCAGTCTCCGTATCTCGGTCTCCATCAGGACCTTaGTCACGGCCCTCGCCCCTCGCCCGACGAAGCAAG +
Preference number: 6 (lower is better)
Translates to: EPVSVSRSPSGP*SRPSPLARRSK
Trigger: CTTGCTTCGTCGGGCGAGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGACCGAGATACGGAGACTGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp GCCAGCACACCCATCGCCTCCATGACCTTCTGCCACTaGCCAATGCTCTCCACACGCCGGCCAAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ASTPIASMTFCH*PMLSTRRPKGL
Trigger: GAGGCCCTTTGGCCGGCGTGTGGAGAGCATTGGCCAGTGGCAGAAGGTCATGGAGGCGATGGGTGTGCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp CATCGGCCCCACGGAGCAGGCTCTCGTATGTGGCGGTaGCAAAGAAGGCATAGGCACGCGTGTGGCGGTGGT +
Preference number: 6 (lower is better)
Translates to: HRPHGAGSRMWR*QRRHRHACGGG
Trigger: ACCACCGCCACACGCGTGCCTATGCCTTCTTTGTCACCGCCACATACGAGAGCCTGCTCCGTGGGGCCGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp GCTGAAAGCGCTGCTGCGCCTGCCGCTCGTGCCGCTTaGAAGCTTCCCGTCGCTGGTACTCCAGTTTGGCCA +
Preference number: 6 (lower is better)
Translates to: AESAAAPAARAA*KLPVAGTPVWP
Trigger: TGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCAGGCGCAGCAGCGCTTTCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp GGCGGTGGTGGCGAACTTGCACGATCAGCTCGGGAATaGCCACCCGGATGTGATTCAGCAGCCACAGCAGCG +
Preference number: 6 (lower is better)
Translates to: GGGGELARSARE*PPGCDSAATAA
Trigger: CGCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CAGCTCTCTAGCTCTGCCTGCGTGAGCTGCGGTGAATaGTCCTCCTCTGGCGGGTCGATCCACGAGGACCTG +
Preference number: 6 (lower is better)
Translates to: QLSSSACVSCGE*SSSGGSIHEDL
Trigger: CAGGTCCTCGTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp GGGACCAGCACCGCCTGCAACTGCCGCTCGAGGCTCTaGGTCAGGGACAGGAGTAGCAGGAGCTCTTTTAGG +
Preference number: 6 (lower is better)
Translates to: GTSTACNCRSRL*VRDRSSRSSFR
Trigger: CCTAAAAGAGCTCCTGCTACTCCTGTCCCTGACCCAGAGCCTCGAGCGGCAGTTGCAGGCGGTGCTGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS CAA 72 bp GAAGGCATAGGCACGCGTGTGGCGGTGGTGGCGAACTaGCACGATCAGCTCGGGAATGCCCACCCGGATGTG +
Preference number: 6 (lower is better)
Translates to: EGIGTRVAVVAN*HDQLGNAHPDV
Trigger: CACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGCCACACGCGTGCCTATGCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp AGAGCCAGTCTCCGTATCTCGGTCTCCATCAGGACCTaGGTCACGGCCCTCGCCCCTCGCCCGACGAAGCAA +
Preference number: 6 (lower is better)
Translates to: RASLRISVSIRT*VTALAPRPTKQ
Trigger: TTGCTTCGTCGGGCGAGGGGCGAGGGCCGTGACCAAGGTCCTGATGGAGACCGAGATACGGAGACTGGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp TGCCGCTCGTGCCGCTTGAAAGCTTCCCGTCGCTGGTACTCCAGTTaGGCCATCTCCTCAGCTACCCAGCCGGGGATGTCAGGGATGGCT +
Preference number: 6 (lower is better)
Translates to: CRSCRLKASRRWYSS*AISSATQPGMSGMA
Trigger: AGCCATCCCTGACATCCCCGGCTGGGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CACGTCGCAGTCCTCAGTGGGCACTGTCTTCATCCATaGCTTGTGGGACACCAGGTAGCGGCCAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: HVAVLSGHCLHP*LVGHQVAASLQ
Trigger: CTGCAGGCTGGCCGCTACCTGGTGTCCCACAAGGCATGGATGAAGACAGTGCCCACTGAGGACTGCGACGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp TGGCCAATGCTCTCCACACGCCGGCCAAAGGGCCTCTaGAGGCCAGTGCAGAGCTTGAAGGCATCACTTCGG +
Preference number: 6 (lower is better)
Translates to: WPMLSTRRPKGL*RPVQSLKASLR
Trigger: CCGAAGTGATGCCTTCAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCGGCGTGTGGAGAGCATTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp GCCTGCCGCTCGTGCCGCTTGAAAGCTTCCCGTCGCTaGTACTCCAGTTTGGCCATCTCCTCAGCTACCCAG +
Preference number: 6 (lower is better)
Translates to: ACRSCRLKASRR*YSSLAISSATQ
Trigger: CTGGGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCACGAGCGGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp GGCTGGTCCTCCAAGAAGCGCACGTTGTGCAGAGCCTCCCCCTGCTaGGCTCGAAGGTTCTGCAACCAGAAGCGAATGATGCTCTGCCGC +
Preference number: 6 (lower is better)
Translates to: GWSSKKRTLCRASPC*ARRFCNQKRMMLCR
Trigger: GCGGCAGAGCATCATTCGCTTCTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp GCAGCCAGCTCCGGAATGATTGGCTGGTCCTCCAAGAAGCGCACGTaGTGCAGAGCCTCCCCCTGCTTGGCTCGAAGGTTCTGCAACCAG +
Preference number: 6 (lower is better)
Translates to: AASSGMIGWSSKKRT*CRASPCLARRFCNQ
Trigger: CTGGTTGCAGAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp GAAGAGCCAAGTGCTCTAGCACCACCACAGATACAATaGCCGCCTCTGGGCTCAGCCAGGGGAACAGGCGCT +
Preference number: 6 (lower is better)
Translates to: EEPSALAPPQIQ*PPLGSARGTGA
Trigger: AGCGCCTGTTCCCCTGGCTGAGCCCAGAGGCGGCCATTGTATCTGTGGTGGTGCTAGAGCACTTGGCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp GGTGACAAAGAAGGCATAGGCACGCGTGTGGCGGTGGTGGCGAACTaGCACGATCAGCTCGGGAATGCCCACCCGGATGTGATTCAGCAG +
Preference number: 6 (lower is better)
Translates to: GDKEGIGTRVAVVAN*HDQLGNAHPDVIQQ
Trigger: CTGCTGAATCACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGTTCGCCACCACCGCCACACGCGTGCCTATGCCTTCTTTGTCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp AGGCCAGTGCAGAGCTTGAAGGCATCACTTCGGATCTCAATCAGGTaGTTGACGAGGGCGCACAGGGCGGCCAGTGGGAAGGCAGAGGAG +
Preference number: 6 (lower is better)
Translates to: RPVQSLKASLRISIR*LTRAHRAASGKAEE
Trigger: CTCCTCTGCCTTCCCACTGGCCGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp CTCTCCACACGCCGGCCAAAGGGCCTCTGCAGGCCAGTGCAGAGCTaGAAGGCATCACTTCGGATCTCAATCAGGTTGTTGACGAGGGCG +
Preference number: 6 (lower is better)
Translates to: LSTRRPKGLCRPVQS*KASLRISIRLLTRA
Trigger: CGCCCTCGTCAACAACCTGATTGAGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCGGCGTGTGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp AGTTTACCACGATGGCCAGCACACCCATCGCCTCCATaGCCTTCTGCCACTGGCCAATGCTCTCCACACGCC +
Preference number: 6 (lower is better)
Translates to: SLPRWPAHPSPP*PSATGQCSPHA
Trigger: GGCGTGTGGAGAGCATTGGCCAGTGGCAGAAGGTCATGGAGGCGATGGGTGTGCTGGCCATCGTGGTAAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp TTCTTCATGCAGCTCTCTAGCTCTGCCTGCGTGAGCTaGGGTGAATGCTCCTCCTCTGGCGGGTCGATCCAC +
Preference number: 6 (lower is better)
Translates to: FFMQLSSSACVS*GECSSSGGSIH
Trigger: GTGGATCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp ATGATGCCTCGTGCAGCCAGCTCCGGAATGATTGGCTaGTCCTCCAAGAAGCGCACGTTGTGCAGAGCCTCC +
Preference number: 6 (lower is better)
Translates to: MMPRAASSGMIG*SSKKRTLCRAS
Trigger: GGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCCAATCATTCCGGAGCTGGCTGCACGAGGCATCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp TCCGGAATGATTGGCTGGTCCTCCAAGAAGCGCACGTaGTGCAGAGCCTCCCCCTGCTTGGCTCGAAGGTTC +
Preference number: 6 (lower is better)
Translates to: SGMIGWSSKKRT*CRASPCLARRF
Trigger: GAACCTTCGAGCCAAGCAGGGGGAGGCTCTGCACAACGTGCGCTTCTTGGAGGACCAGCCAATCATTCCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp TGCCGCTTGAAAGCTTCCCGTCGCTGGTACTCCAGTTaGGCCATCTCCTCAGCTACCCAGCCGGGGATGTCA +
Preference number: 6 (lower is better)
Translates to: CRLKASRRWYSS*AISSATQPGMS
Trigger: TGACATCCCCGGCTGGGTAGCTGAGGAGATGGCCAAACTGGAGTACCAGCGACGGGAAGCTTTCAAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp ACTTGCACGATCAGCTCGGGAATGCCCACCCGGATGTaGTTCAGCAGCCACAGCAGCGTGTGGTCATCAGTG +
Preference number: 6 (lower is better)
Translates to: TCTISSGMPTRM*FSSHSSVWSSV
Trigger: CACTGATGACCACACGCTGCTGTGGCTGCTGAATCACATCCGGGTGGGCATTCCCGAGCTGATCGTGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp CATACTTCTTCATGCAGCTCTCTAGCTCTGCCTGCGTaGGCTGCGGTGAATGCTCCTCCTCTGGCGGGTCGA +
Preference number: 6 (lower is better)
Translates to: HTSSCSSLALPA*AAVNAPPLAGR
Trigger: TCGACCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAAGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp TCCTCATACTTCTTCATGCAGCTCTCTAGCTCTGCCTaGGTGAGCTGCGGTGAATGCTCCTCCTCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SSYFFMQLSSSA*VSCGECSSSGG
Trigger: CCCGCCAGAGGAGGAGCATTCACCGCAGCTCACGCAGGCAGAGCTAGAGAGCTGCATGAAGAAGTATGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp AGCTTGAAGGCATCACTTCGGATCTCAATCAGGTTGTaGACGAGGGCGCACAGGGCGGCCAGTGGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: SLKASLRISIRL*TRAHRAASGKA
Trigger: TGCCTTCCCACTGGCCGCCCTGTGCGCCCTCGTCAACAACCTGATTGAGATCCGAAGTGATGCCTTCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp CGCCGGCCAAAGGGCCTCTGCAGGCCAGTGCAGAGCTaGAAGGCATCACTTCGGATCTCAATCAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RRPKGLCRPVQS*KASLRISIRLL
Trigger: CAACAACCTGATTGAGATCCGAAGTGATGCCTTCAAGCTCTGCACTGGCCTGCAGAGGCCCTTTGGCCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CTCGTGAACTGGAAACACCTGCTGTATGATGCCTCGTaGAGCCAGCTCCGGAATGATTGGCTGGTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: LVNWKHLLYDAS*SQLRNDWLVLQ
Trigger: TTGGAGGACCAGCCAATCATTCCGGAGCTGGCTGCACGAGGCATCATACAGCAGGTGTTTCCAGTTCACGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp AGGCGGGGCAGACCCTTCACACTCAAGACTAGCTCCTaGAGCTGGAAGCAGCCAAGCATCAGTATAAAGACA +
Preference number: 6 (lower is better)
Translates to: RRGRPFTLKTSS*SWKQPSISIKT
Trigger: TGTCTTTATACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGTCTTGAGTGTGAAGGGTCTGCCCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp TCAGCTACCCAGCCGGGGATGTCAGGGATGGCTACATaGATGAGGTACTTGACTAGAAGAGCCAAGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SATQPGMSGMAT*MRYLTRRAKCS
Trigger: AGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGACATCCCCGGCTGGGTAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 72 bp CCGGGGATGTCAGGGATGGCTACATGGATGAGGTACTaGACTAGAAGAGCCAAGTGCTCTAGCACCACCACA +
Preference number: 6 (lower is better)
Translates to: PGMSGMATWMRY*TRRAKCSSTTT
Trigger: TGTGGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGACATCCCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CAA 90 bp GCTACCCAGCCGGGGATGTCAGGGATGGCTACATGGATGAGGTACTaGACTAGAAGAGCCAAGTGCTCTAGCACCACCACAGATACAATG +
Preference number: 6 (lower is better)
Translates to: ATQPGMSGMATWMRY*TRRAKCSSTTTDTM
Trigger: CATTGTATCTGTGGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGCCATCCCTGACATCCCCGGCTGGGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp GCTGGTTTTCACACACGGCCTGCACCCAGGACTTCATaGGACGATTCAGAATACGCTGCTCGTGAACTGGAA +
Preference number: 6 (lower is better)
Translates to: AGFHTRPAPRTS*DDSEYAARELE
Trigger: TTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGCAGGCCGTGTGTGAAAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp GGGTGGCCAGCATCTCTTTTAGGCGGTCCATGTCTTTaGGGTAGAAGCCGATGTAGAACAGACTCAAGTACG +
Preference number: 6 (lower is better)
Translates to: GWPASLLGGPCL*GRSRCRTDSST
Trigger: CGTACTTGAGTCTGTTCTACATCGGCTTCTACCTCAAAGACATGGACCGCCTAAAAGAGATGCTGGCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000093450.6
CDS GCA 72 bp GCTACATGGATGAGGTACTTGACTAGAAGAGCCAAGTaGTCTAGCACCACCACAGATACAATGGCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: ATWMRYLTRRAK*SSTTTDTMAAS
Trigger: AGAGGCGGCCATTGTATCTGTGGTGGTGCTAGAGCACTTGGCTCTTCTAGTCAAGTACCTCATCCATGTAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS CCA 72 bp CTTCATGAGACGATTCAGAATACGCTGCTCGTGAACTaGAAACACCTGCTGTATGATGCCTCGTGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LHETIQNTLLVN*KHLLYDASCSQ
Trigger: CTGGCTGCACGAGGCATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp CAGGACTTCATGAGACGATTCAGAATACGCTGCTCGTaGACTGGAAACACCTGCTGTATGATGCCTCGTGCA +
Preference number: 6 (lower is better)
Translates to: QDFMRRFRIRCS*TGNTCCMMPRA
Trigger: TGCACGAGGCATCATACAGCAGGTGTTTCCAGTTCACGAGCAGCGTATTCTGAATCGTCTCATGAAGTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp AGAGCGAAGACCACACAGGAAACATCCCGGCTTGTCTaGTCAGCCTCAGTGAATGTATACAGAACAGAGCCA +
Preference number: 6 (lower is better)
Translates to: RAKTTQETSRLV*SASVNVYRTEP
Trigger: TGGCTCTGTTCTGTATACATTCACTGAGGCTGATCAGACAAGCCGGGATGTTTCCTGTGTGGTCTTCGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS TCA 72 bp GGAGTAGCAGGAGCTCTTTTAGGCGGTCCATGTCTTTaGGGTAGAAGCCGATGTAGAACAGACTCAAGTACG +
Preference number: 6 (lower is better)
Translates to: GVAGALLGGPCL*GRSRCRTDSST
Trigger: CGTACTTGAGTCTGTTCTACATCGGCTTCTACCTCAAAGACATGGACCGCCTAAAAGAGCTCCTGCTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213382.2
CDS CCA 72 bp GGCAGACCCTTCACACTCAAGACTAGCTCCTGCAGCTaGAAGCAGCCAAGCATCAGTATAAAGACACAGATA +
Preference number: 6 (lower is better)
Translates to: GRPFTLKTSSCS*KQPSISIKTQI
Trigger: TATCTGTGTCTTTATACTGATGCTTGGCTGCTTCCAGCTGCAGGAGCTAGTCTTGAGTGTGAAGGGTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp CAGATATCATCTAAAGGCTGGTTTTCACACACGGCCTaGACCCAGGACTTCATGAGACGATTCAGAATACGC +
Preference number: 6 (lower is better)
Translates to: QISSKGWFSHTA*TQDFMRRFRIR
Trigger: GCGTATTCTGAATCGTCTCATGAAGTCCTGGGTGCAGGCCGTGTGTGAAAACCAGCCTTTAGATGATATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2
CDS GCA 72 bp AGCCTCAGTGAATGTATACAGAACAGAGCCAAAAACTaGAGGATAAACCATTGCCGATGTGTAGAAGCCCAG +
Preference number: 6 (lower is better)
Translates to: SLSECIQNRAKN*RINHCRCVEAQ
Trigger: CTGGGCTTCTACACATCGGCAATGGTTTATCCTGCAGTTTTTGGCTCTGTTCTGTATACATTCACTGAGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000093450.6
ENSMUST00000213382.2