RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034107

Ensembl transcript IDs: ENSMUST00000058682.11, ENSMUST00000186641.7, ENSMUST00000190340.2

Found 243 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTaGCCCGGTACTGGAAGGTACACAGGAGGCAAAGGGGATACTGCA +
Preference number: 1 (lower is better)
Translates to: VPQPSPFRASCVLSF*PGTGRYTGGKGDTA
Trigger: TGCAGTATCCCCTTTGCCTCCTGTGTACCTTCCAGTACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR TCA 90 bp AAAACTTCGTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTaGGTTTCTGGCCCGGTACTGGAAGGTACACAGGAGGCAAAGGGG +
Preference number: 1 (lower is better)
Translates to: KTSFHSLPPSELPVC*VSGPVLEGTQEAKG
Trigger: CCCCTTTGCCTCCTGTGTACCTTCCAGTACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAACGAAGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATaGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAAT +
Preference number: 1 (lower is better)
Translates to: LWQPRVMVILNQGWR*LSWGQDHGLQKTHN
Trigger: ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CCA 90 bp CCTTTCAATTGGCAGAAGAGTTATGCCATGGTAGGGGATGGGGGATaGGGACCATATGTCAACTGTGAAGCCACTTCCTCATATCTTAAG +
Preference number: 1 (lower is better)
Translates to: PFNWQKSYAMVGDGG*GPYVNCEATSSYLK
Trigger: CTTAAGATATGAGGAAGTGGCTTCACAGTTGACATATGGTCCCCATCCCCCATCCCCTACCATGGCATAACTCTTCTGCCAATTGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR-3UTR GCA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTATACCACAGGAATGCTaGAAGAGGACCGAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGIPQEC*KRTEQS
Trigger: GCTTTGCTCGGTCCTCTTGCAGCATTCCTGTGGTAT...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR-3UTR TCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAAAGGGTGGAGATGGTTaGGCTGGGGCCAGGATCATG +
Preference number: 2 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKKGGDG*AGARIM
Trigger: CATGATCCTGGCCCCAGCTCAACCATCTCCACCCTT...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR-3UTR CCA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTCTGGGGCCAGGATCATaGTCTCCAAAAGACACACAA +
Preference number: 2 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGLGPGS*SPKDTQ
Trigger: TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAG...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR-3UTR CCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACTGGGGCCAGGATCATaGTCTCCAAAAGACACACAA +
Preference number: 2 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKLGPGS*SPKDTQ
Trigger: TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAG...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR-3UTR CCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACAAGAAGGAAAGGGAGGTaGTCACCATTCCAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTRRKGR*SPFQRV
Trigger: GACTCTTTGGAATGGTGACCACCTCCCTTTCCTTCT...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CAA 90 bp TGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTaGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATAGT +
Preference number: 2 (lower is better)
Translates to: WQPRVMVILNQGWRW*SWGQDHGLQKTHNS
Trigger: ACTATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGAAGGAAAGGGAGGTaGTCACCATTCCAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLRRKGR*SPFQRV
Trigger: GACTCTTTGGAATGGTGACCACCTCCCTTTCCTTCT...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CCA 72 bp CCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTaGCCCGGTACTGGAAGGTACACAGGAGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: PSPFRASCVLSF*PGTGRYTGGKG
Trigger: CCCTTTGCCTCCTGTGTACCTTCCAGTACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR TCA 72 bp TTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTaGGTTTCTGGCCCGGTACTGGAAGGTACACAGGAG +
Preference number: 3 (lower is better)
Translates to: FHSLPPSELPVC*VSGPVLEGTQE
Trigger: CTCCTGTGTACCTTCCAGTACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR CCA 72 bp GTACAAGGGGTAAGCAAACTTCCCAGGGCTGTGGCCTaGGCCATGGTATCATGTCTAAGAGCCAGGTGTGCC +
Preference number: 3 (lower is better)
Translates to: VQGVSKLPRAVA*AMVSCLRARCA
Trigger: GGCACACCTGGCTCTTAGACATGATACCATGGCCCAGGCCACAGCCCTGGGAAGTTTGCTTACCCCTTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR TCA 72 bp GGCAGGCAACAGGAAAGGCCCACGTTGTACCCAGTTTaGGAAGCAATTGTATCTAAACACCGGGGAGGCGGG +
Preference number: 3 (lower is better)
Translates to: GRQQERPTLYPV*EAIVSKHRGGG
Trigger: CCCGCCTCCCCGGTGTTTAGATACAATTGCTTCTCAAACTGGGTACAACGTGGGCCTTTCCTGTTGCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR CCA 72 bp TGGCAGAAGAGTTATGCCATGGTAGGGGATGGGGGATaGGGACCATATGTCAACTGTGAAGCCACTTCCTCA +
Preference number: 3 (lower is better)
Translates to: WQKSYAMVGDGG*GPYVNCEATSS
Trigger: TGAGGAAGTGGCTTCACAGTTGACATATGGTCCCCATCCCCCATCCCCTACCATGGCATAACTCTTCTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR CCA 72 bp CCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATaGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: PRVMVILNQGWR*LSWGQDHGLQK
Trigger: CTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR TCA 72 bp TTTGCCTTGAGAGGGGTGTGGACATCGGGAGGGGAATaGGACACAAGTTATTGGCTCATGGGACTTAGGAAT +
Preference number: 3 (lower is better)
Translates to: FALRGVWTSGGE*DTSYWLMGLRN
Trigger: ATTCCTAAGTCCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTCAAGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CCA 72 bp ATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCTaGGGCCAGGATCATGGTCTCCAAAAGACACACAAT +
Preference number: 3 (lower is better)
Translates to: MVILNQGWRWLS*GQDHGLQKTHN
Trigger: ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTTTAGAATAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CCA 72 bp TCAGGAAGGCATCGTATACAGAGGACCCTCAGCCTTTaGTTTAGGGATAGGAACATCGCTAGTGATATTAGG +
Preference number: 3 (lower is better)
Translates to: SGRHRIQRTLSL*FRDRNIASDIR
Trigger: CCTAATATCACTAGCGATGTTCCTATCCCTAAACCAAAGGCTGAGGGTCCTCTGTATACGATGCCTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
3UTR CCA 72 bp AGAGGCCATGATAGGAAAGAATTCATAGATAGGCCTTaGGTAGTTAGGTATGAAAGTAAGGGGTACAAGGGG +
Preference number: 3 (lower is better)
Translates to: RGHDRKEFIDRP*VVRYESKGYKG
Trigger: CCCCTTGTACCCCTTACTTTCATACCTAACTACCCAAGGCCTATCTATGAATTCTTTCCTATCATGGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATGTCGGCCTCCCAAGGTaGTGGGTGGGTCCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNVGLPR*WVGPRA
Trigger: GGCACGGGGACCCACCCAGCACCTTGGGAGGCCGAC...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGAAGAGCCGCCCAGCCTaGGCCAGGGTGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGKSRPA*ARVQAL
Trigger: CAGTGCCTGCACCCTGGCCCAGGCTGGGCGGCTCTT...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAACTGGGTGGGTCCCCGTaGCAGCCTTCTTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVEMVELGPGSWSPKDTQLGGSP*QPSCPW
Trigger: CCAGGGGCAAGAAGGCTGGCACGGGGACCCACCCAG...TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCCTGGGTGGGTCCCCGTaGCAGCCTTCTTGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPLGGSP*QPSCPW
Trigger: CCAGGGGCAAGAAGGCTGGCACGGGGACCCACCCAG...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCGTCGGCCTCCCAAGGTaGTGGGTGGGTCCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSVGLPR*WVGPRA
Trigger: GGCACGGGGACCCACCCAGCACCTTGGGAGGCCGAC...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CAAGGGGTAAGCAAACTTCCCAGGGCTGTGGCCTGGGCCATGGTATCATGTCTAGCCGTTGCAGCGAACTaGGGCCGAGGCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: QGVSKLPRAVAWAMVSCLAVAAN*GRGLSS
Trigger: TGAGGAGAGGCCTCGGCCCCAGTTCGCTGCAACGGC...TAGACATGATACCATGGCCCAGGCCACAGCCCTGGGAAGTTTGCTTACCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATCAGATGCCGATGTCCTaGGCGCGCTCCGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNQMPMS*ARSATG
Trigger: CCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTG...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCCCTGTGCCAGCTCACTaGGGCAGCCTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPPVPAH*GSLQLD
Trigger: GTCCAGCTGGAGGCTGCCTCAGTGAGCTGGCACAGG...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTGGTACTTGTTCCACTTaGCCCAGCGAGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGGTCST*PSEPSA
Trigger: AGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACC...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAAGAGCCGCCCAGCCTaGGCCAGGGTGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLKSRPA*ARVQAL
Trigger: CAGTGCCTGCACCCTGGCCCAGGCTGGGCGGCTCTT...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATAAGACGGTGCCGCCATaGTCGAAGAGCCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNKTVPP*SKSRPA
Trigger: GGCTGGGCGGCTCTTCGACCATGGCGGCACCGTCTT...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGCTCCAGAAGGGTGGCTaGCCAGTTGGAGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGLQKGG*PVGGLV
Trigger: AACCAGGCCTCCAACTGGTCAGCCACCCTTCTGGAG...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGGCTCATCTTCCCCCGTaGTGGGGTTCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGAHLPP*WGSGLS
Trigger: TGACAGCCCTGAACCCCATCACGGGGGAAGATGAGC...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACAGAGGCTGGCAATCCGTaGAGCCCAGGCAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTEAGNP*SPGREE
Trigger: TTCCTCTCTGCCTGGGCTTCACGGATTGCCAGCCTC...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCCTGTGCCAGCTCACTaGGGCAGCCTCCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLPVPAH*GSLQLD
Trigger: GTCCAGCTGGAGGCTGCCTCAGTGAGCTGGCACAGG...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTGCAGGATATTGGGGATaGCCAGCCACTCCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGAGYWG*PATPEG
Trigger: CCCTTCTGGAGTGGCTGGGCATCCCCAATATCCTGC...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTGAGAATGGGCCGTCATaGAGAGGGAAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGENGPS*RGKAAL
Trigger: CAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTC...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTGGTACTTGTTCCACTTaGCCCAGCGAGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGGTCST*PSEPSA
Trigger: AGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACC...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACTGTGCCCACTACTaGCGCAGGCAGGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTHCAHY*RRQEPT
Trigger: GGTTGGCTCCTGCCTGCGGCAGTAGTGGGCACAGTG...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCCACTGTGCCCACTACTaGCGCAGGCAGGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPHCAHY*RRQEPT
Trigger: GGTTGGCTCCTGCCTGCGGCAGTAGTGGGCACAGTG...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp TCCAGGCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAACCAGGAAGACCACTGTaGCCACTACTGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRQVCQPPVTPTVTSEKEPGRPL*PLLPQA
Trigger: TGCCTGCGGCAGTAGTGGGCACAGTGGTCTTCCTGG...TTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTCCTTCTGCCAGCAGCTaGTCAATCCCAAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGPSASS*SIPNRP
Trigger: AGGCCTGTTTGGGATTGACCAGCTGCTGGCAGAAGG...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCGCCGTTGCAGCGAACTaGGGCCGAGGCCTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSAVAAN*GRGLSS
Trigger: TGAGGAGAGGCCTCGGCCCCAGTTCGCTGCAACGGC...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACAGGTTCAGGGCTGTCATaGGGGCCGTTGCAGCGAACT +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTGSGLS*GPLQRT
Trigger: AGTTCGCTGCAACGGCCCCCATGACAGCCCTGAACC...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGGGTTCAGGGCTGTCATaGGGGCCGTTGCAGCGAACT +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGGSGLS*GPLQRT
Trigger: AGTTCGCTGCAACGGCCCCCATGACAGCCCTGAACC...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTCAGATGCCGATGTCCTaGGCGCGCTCCGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVQMPMS*ARSATG
Trigger: CCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTG...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAACCAGGAAGACCACTGTaGCCACTACTGCCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RVEMVELGPGSWSPKDTQPGRPL*PLLPQA
Trigger: TGCCTGCGGCAGTAGTGGGCACAGTGGTCTTCCTGG...TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACAGGATGTGGAACCAGATaGCGATGTCCTGGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTGCGTR*RCPGRA
Trigger: AGCGCGCCCAGGACATCGGCATCTGGTTCCACATCC...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAAGCAAGTGCGGTTGTGTaGGGAGGTGAAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: RVEMVELGPGSWSPKDTQASAVV*GGESGR
Trigger: CCGCCCACTTTCACCTCCGCACACAACCGCACTTGC...TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR GCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCGCAAGTGCGGTTGTGTaGGGAGGTGAAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPASAVV*GGESGR
Trigger: CCGCCCACTTTCACCTCCGCACACAACCGCACTTGC...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAAAGGGAGGGTGGCTGACCAGTTaGAGGCCTGGTTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: ASVSASGNPYCDLREGKGGWLTS*RPGWVT
Trigger: AGTTACCCAACCAGGCCTCCAACTGGTCAGCCACCC...TCCCTTTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTAAGACGGTGCCGCCATaGTCGAAGAGCCGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVKTVPP*SKSRPA
Trigger: GGCTGGGCGGCTCTTCGACCATGGCGGCACCGTCTT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAAGTGTGTCAGCCTCCGCTCCAGAAGGGTGGCTaGCCAGTTGGAGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: NCLLTHLQQSSRQVCQPPLQKGG*PVGGLV
Trigger: AACCAGGCCTCCAACTGGTCAGCCACCCTTCTGGAG...CGGAGGCTGACACACTTGCCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGAAGCTGTCTGAGCTGTaGCACAGCTCCTGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGKLSEL*HSSCVG
Trigger: ACCAACGCAGGAGCTGTGTCACAGCTCAGACAGCTT...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATAAGCACAGCCCAGGGTaGGCGGAGGAGGATGTAATG +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNKHSPG*AEEDVM
Trigger: CATTACATCCTCCTCCGCGCACCCTGGGCTGTGCTT...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTACTGAATACACCTTCTaGCAGCAGCTGGTCAATCCC +
Preference number: 4 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGTEYTF*QQLVNP
Trigger: GGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGT...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACAGAGAATGGGCCGTCATaGAGAGGGAAGGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTENGPS*RGKAAL
Trigger: CAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTC...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAAGTGTGTCAGCCTCCGGCAAGTGCGGTTGTGTaGGGAGGTGAAAGTGGGCGG +
Preference number: 4 (lower is better)
Translates to: NCLLTHLQQSSRQVCQPPASAVV*GGESGR
Trigger: CCGCCCACTTTCACCTCCGCACACAACCGCACTTGC...CGGAGGCTGACACACTTGCCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR CCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGGAGGCAGCCTCCAGCTaGACACTCCTCATTTCGGAT +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGEAASS*TLLISD
Trigger: ATCCGAAATGAGGAGTGTCCAGCTGGAGGCTGCCTC...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
3UTR CAA 72 bp CTGGGAAGGCAGGGACCCCAGCGTTTAACCTTTCAATaGGCAGAAGAGTTATGCCATGGTAGGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LGRQGPQRLTFQ*AEELCHGRGWG
Trigger: CCCCCATCCCCTACCATGGCATAACTCTTCTGCCAATTGAAAGGTTAAACGCTGGGGTCCCTGCCTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp CAGCAAAACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGCTCATCTTCCCCCGTaGTGGGGTTCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QQNSHRSRDFRQTFCLERAHLPP*WGSGLS
Trigger: TGACAGCCCTGAACCCCATCACGGGGGAAGATGAGC...CCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTTTTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGGCTGGCAATCCGTaGAGCCCAGGCAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVEAGNP*SPGREE
Trigger: TTCCTCTCTGCCTGGGCTTCACGGATTGCCAGCCTC...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAAGACAAGGTTCACCACTaGCCCTGTGAGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: RVEMVELGPGSWSPKDTQDKVHH*PCEAGN
Trigger: ATTGCCAGCCTCACAGGGTCAGTGGTGAACCTTGTC...TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAACCCAGGCTGGGCTCTaGACTTGGAGGTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKTQAGL*TWRLVI
Trigger: GATGACCAACCTCCAAGTTCAGAGCCCAGCCTGGGT...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR GCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGCAGGCGCAGGTCTTCTaGATAGTAGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGQAQVF*IVAKHS
Trigger: GCTGTGCTTTGCTACTATGCAGAAGACCTGCGCCTG...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGGGGTGGCTGACCAGTTaGAGGCCTGGTTGGGTAACT +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLGWLTS*RPGWVT
Trigger: AGTTACCCAACCAGGCCTCCAACTGGTCAGCCACCC...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACTTCTCGTGCCCATATaGAGTCTTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTLLVPI*SLGQDL
Trigger: GAGATCCTGGCCAAGACTCCATATGGGCACGAGAAG...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTACATGGTCCAATGGCTaGTACTTGTTCCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGTWSNG*YLFHLP
Trigger: GGGCAAGTGGAACAAGTACCAGCCATTGGACCATGT...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAAAGGGAAGCGGTAGGCCAATGTaGCGTTTTTCCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: ASVSASGNPYCDLREGKGSGRPM*RFSASS
Trigger: ACTGGAAGCGGAAAAACGCCACATTGGCCTACCGCT...TCCCTTTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACAAGGCCCGTTAGGATGTaGAACCAGATGCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTRPVRM*NQMPMS
Trigger: GGACATCGGCATCTGGTTCCACATCCTAACGGGCCT...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCAAAGGCCAGGCGGATaGCCAGGAGAGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLQRPGG*PGESSK
Trigger: CTTACTGGACTCTCCTGGCCATCCGCCTGGCCTTTG...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR CCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGCAAAGGCCAGGCGGATaGCCAGGAGAGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVQRPGG*PGESSK
Trigger: CTTACTGGACTCTCCTGGCCATCCGCCTGGCCTTTG...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR TCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAAAGCTGTCTGAGCTGTaGCACAGCTCCTGCGTTGGT +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKKLSEL*HSSCVG
Trigger: ACCAACGCAGGAGCTGTGTCACAGCTCAGACAGCTT...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp TCCAGGCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAACAGCTACGAAGATGGTaGCGAATCCAAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SRQVCQPPVTPTVTSEKEQLRRW*RIQTAA
Trigger: TGCTGCAGTTTGGATTCGTCACCATCTTCGTAGCTG...TTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGTCTCCACCCAGTTGTTaGGTAGGGCAAAAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLSPPSC*VGQKAA
Trigger: CGCCGCTTTTTGCCCTACTCAACAACTGGGTGGAGA...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTACCCAGGCTGGGCTCTaGACTTGGAGGTTGGTCATC +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVTQAGL*TWRLVI
Trigger: GATGACCAACCTCCAAGTTCAGAGCCCAGCCTGGGT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR GCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTAAGCACAGCCCAGGGTaGGCGGAGGAGGATGTAATG +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVKHSPG*AEEDVM
Trigger: CATTACATCCTCCTCCGCGCACCCTGGGCTGTGCTT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCCAGGCGCAGGTCTTCTaGATAGTAGCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPQAQVF*IVAKHS
Trigger: GCTGTGCTTTGCTACTATGCAGAAGACCTGCGCCTG...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAGCACCGCCCACAGTaGCATGAACAAACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTQHRPQ*HEQTEE
Trigger: TTCTTCAGTTTGTTCATGGCACTGTGGGCGGTGCTG...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACATTCGTGGGGTTCTCTTaGTTCCTCAGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTFVGFS*FLRSSS
Trigger: GGAAGAAGACCTGAGGAACCAAGAGAACCCCACGAA...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACAGACCAGTTGGAGGCCTaGTTGGGTAACTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTDQLEA*LGNSCR
Trigger: TCTACAGGAGTTACCCAACCAGGCCTCCAACTGGTC...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCTCCAGCAGGATATTaGGGATGCCCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVAPAGY*GCPATP
Trigger: TGGAGTGGCTGGGCATCCCCAATATCCTGCTGGAGC...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCCAGGGTGCAGGCACTaGAGAGCAGCCAAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLPGCRH*RAAKKN
Trigger: GTTCTTTTTGGCTGCTCTCCAGTGCCTGCACCCTGG...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGCCAGGGTGCAGGCACTaGAGAGCAGCCAAAAAGAAC +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVPGCRH*RAAKKN
Trigger: GTTCTTTTTGGCTGCTCTCCAGTGCCTGCACCCTGG...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCGCAGCCTTTCAGCTTTaGGACAAGAACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPAAFQL*DKNLLH
Trigger: GTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGC...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAGCCTCTTGGTGCTGGTaGAGAAGGTGTCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKASWCW*RRCLGC
Trigger: ACAACCAAGACACCTTCTTCACCAGCACCAAGAGGC...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AACAGAAGGCAGGCAACAGGAAAGGCCCACGTTGTACCCAGTTTGAGAAGCAATGACAAGGTTCACCACTaGCCCTGTGAGGCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: NRRQATGKAHVVPSLRSNDKVHH*PCEAGN
Trigger: ATTGCCAGCCTCACAGGGTCAGTGGTGAACCTTGTC...ATTGCTTCTCAAACTGGGTACAACGTGGGCCTTTCCTGTTGCCTGCCTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAATTCCCGCTTCACCTTaGTCTCCACGGATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKIPASP*SPRILG
Trigger: TCCCAGAATCCGTGGAGATCAAGGTGAAGCGGGAAT...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCAGGCCTTTCTTCTCGTaGCCATATGGAGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSRPFFS*PYGVLA
Trigger: GGCCAAGACTCCATATGGGCACGAGAAGAAAGGCCT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCACAAGGTGTGGTAGTTaGCCGGGTATCCCACAAACC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSTRCGS*PGIPQT
Trigger: GGTTTGTGGGATACCCGGGCAACTACCACACCTTGT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGACAAGGTGTGGTAGTTaGCCGGGTATCCCACAAACC +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVTRCGS*PGIPQT
Trigger: GGTTTGTGGGATACCCGGGCAACTACCACACCTTGT...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACTGTCTTGTCCTTCGTaGGGTTCTCTTGGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTLSCPS*GSLGSS
Trigger: TGAGGAACCAAGAGAACCCCACGAAGGACAAGACAG...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCAGTTGGAGGCCTGGTTaGGTAACTCCTGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSSWRPG*VTPVEA
Trigger: TGCCTCTACAGGAGTTACCCAACCAGGCCTCCAACT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGGACCAGTTGGAGGCCTaGTTGGGTAACTCCTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLDQLEA*LGNSCR
Trigger: TCTACAGGAGTTACCCAACCAGGCCTCCAACTGGTC...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCCTTCTCGTGCCCATATaGAGTCTTGGCCAGGATCTC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSLLVPI*SLGQDL
Trigger: GAGATCCTGGCCAAGACTCCATATGGGCACGAGAAG...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCAGCGGTAGGCCAATGTaGCGTTTTTCCGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSSGRPM*RFSASS
Trigger: ACTGGAAGCGGAAAAACGCCACATTGGCCTACCGCT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGGCAGCCTCCAGCTaGACACTCCTCATTTCGGAT +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVEAASS*TLLISD
Trigger: ATCCGAAATGAGGAGTGTCCAGCTGGAGGCTGCCTC...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAGCTGTAGTAGACACGTaGCAGGAAGTCGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKAVVDT*QEVGGE
Trigger: TTCTCCTCCGACTTCCTGCCACGTGTCTACTACAGC...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATCCAGAACACGGCCAATaGAGAACACCACATGCTCAA +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNPEHGQ*RTPHAQ
Trigger: TTGAGCATGTGGTGTTCTCCATTGGCCGTGTTCTGG...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AACAGAAGGCAGGCAACAGGAAAGGCCCACGTTGTACCCAGTTTGAGAAGCAATGCCTCTTGGTGCTGGTaGAGAAGGTGTCTTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NRRQATGKAHVVPSLRSNASWCW*RRCLGC
Trigger: ACAACCAAGACACCTTCTTCACCAGCACCAAGAGGC...ATTGCTTCTCAAACTGGGTACAACGTGGGCCTTTCCTGTTGCCTGCCTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCTGCGTTGGTATGTCTaGGAACACCAGGAAACATCC +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLLRWYV*EHQETS
Trigger: GGATGTTTCCTGGTGTTCTCAGACATACCAACGCAG...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCACTGAATACACCTTCTaGCAGCAGCTGGTCAATCCC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSTEYTF*QQLVNP
Trigger: GGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACAGCACCGCCCACAGTaGCATGAACAAACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKQHRPQ*HEQTEE
Trigger: TTCTTCAGTTTGTTCATGGCACTGTGGGCGGTGCTG...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp CCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACAACGTTATTGATGATCTaGTTGCCCACCATGATGACC +
Preference number: 4 (lower is better)
Translates to: PRVEMVELGPGSWSPKDTTLLMI*LPTMMT
Trigger: GGTCATCATGGTGGGCAAGCAGATCATCAATAACGT...TGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp ACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAAGTGTGTGGATGTGGAACCAGATaGCGATGTCCTGGGCGCGCT +
Preference number: 4 (lower is better)
Translates to: TIVNCLLTHLQQSSRQVCGCGTR*RCPGRA
Trigger: AGCGCGCCCAGGACATCGGCATCTGGTTCCACATCC...ACACACTTGCCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGGCCCATATGGAGTCTTaGCCAGGATCTCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGAHMES*PGSQIE
Trigger: TTCTATTTGAGATCCTGGCCAAGACTCCATATGGGC...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCAGCCTTTCAGCTTTaGGACAAGAACCTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVAAFQL*DKNLLH
Trigger: GTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGC...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCATTTCAAGGTATTCGTaGAACAGCCCCTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSISRYS*NSPSQG
Trigger: GCCTTGTGAGGGGCTGTTTCACGAATACCTTGAAAT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACTCCCAAGAAACCATTaGAGCTTGCTTGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTLPRNH*SLLALN
Trigger: GTTCAAAGCAAGCAAGCTGCAATGGTTTCTTGGGAG...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CAGCAAAACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGACATGGTCCAATGGCTaGTACTTGTTCCACTTGCCC +
Preference number: 4 (lower is better)
Translates to: QQNSHRSRDFRQTFCLERTWSNG*YLFHLP
Trigger: GGGCAAGTGGAACAAGTACCAGCCATTGGACCATGT...CCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAAGTACCTTCGCACATaGTCCAATGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLKYLRT*SNGWYL
Trigger: CAAGTACCAGCCATTGGACCATGTGCGAAGGTACTT...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGAAGTACCTTCGCACATaGTCCAATGGCTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVKYLRT*SNGWYL
Trigger: CAAGTACCAGCCATTGGACCATGTGCGAAGGTACTT...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTCCAGAACACGGCCAATaGAGAACACCACATGCTCAA +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVPEHGQ*RTPHAQ
Trigger: TTGAGCATGTGGTGTTCTCCATTGGCCGTGTTCTGG...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATTCTGAACTTGGAGGTTaGTCATCCTTCACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNSELGG*SSFTPV
Trigger: AACAGGAGTGAAGGATGACCAACCTCCAAGTTCAGA...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR CCA 90 bp AGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATCTGAACTTGGAGGTTaGTCATCCTTCACTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RVEMVELGPGSWSPKDTQSELGG*SSFTPV
Trigger: AACAGGAGTGAAGGATGACCAACCTCCAAGTTCAGA...TTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
3UTR CAA 72 bp GGTACACAGGAGGCAAAGGGGATACTGCAGAGGCCTTaGATCTGTCAGGATAAAGAGGCCATGATAGGAAAG +
Preference number: 4 (lower is better)
Translates to: GTQEAKGILQRP*ICQDKEAMIGK
Trigger: CTTTCCTATCATGGCCTCTTTATCCTGACAGATCAAAGGCCTCTGCAGTATCCCCTTTGCCTCCTGTGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTATTTCAAGGTATTCGTaGAACAGCCCCTCACAAGGC +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVISRYS*NSPSQG
Trigger: GCCTTGTGAGGGGCTGTTTCACGAATACCTTGAAAT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACTCCCAAGAAACCATTaGAGCTTGCTTGCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKLPRNH*SLLALN
Trigger: GTTCAAAGCAAGCAAGCTGCAATGGTTTCTTGGGAG...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGACGTTATTGATGATCTaGTTGCCCACCATGATGACC +
Preference number: 4 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLTLLMI*LPTMMT
Trigger: GGTCATCATGGTGGGCAAGCAGATCATCAATAACGT...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGAAGAACAAAATCAATTaGGGGTTTGGCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVKNKIN*GFGRAP
Trigger: GGGAGCTCTGCCAAACCCCCAATTGATTTTGTTCTT...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGGCTCCAGCAGGATATTaGGGATGCCCAGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRAPAGY*GCPATP
Trigger: TGGAGTGGCTGGGCATCCCCAATATCCTGCTGGAGC...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAAGTGAAGAAGGTGTCTTaGTTGTCACTCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKVKKVS*LSLPRN
Trigger: GTTTCTTGGGAGTGACAACCAAGACACCTTCTTCAC...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGGTGAAGAAGGTGTCTTaGTTGTCACTCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVVKKVS*LSLPRN
Trigger: GTTTCTTGGGAGTGACAACCAAGACACCTTCTTCAC...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCGCCCATATGGAGTCTTaGCCAGGATCTCAAATAGAA +
Preference number: 4 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSAHMES*PGSQIE
Trigger: TTCTATTTGAGATCCTGGCCAAGACTCCATATGGGC...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTTCGCACATGGTCCAATaGCTGGTACTTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVSHMVQ*LVLVPL
Trigger: AAGTGGAACAAGTACCAGCCATTGGACCATGTGCGA...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AACAGAAGGCAGGCAACAGGAAAGGCCCACGTTGTACCCAGTTTGAGAAGCAATTCGCACATGGTCCAATaGCTGGTACTTGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: NRRQATGKAHVVPSLRSNSHMVQ*LVLVPL
Trigger: AAGTGGAACAAGTACCAGCCATTGGACCATGTGCGA...ATTGCTTCTCAAACTGGGTACAACGTGGGCCTTTCCTGTTGCCTGCCTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp GAAGAACAAAATACTTTGAGTACAATGGTCAGCAAAACAGCCACAGAAGCAGGGCAAAGGCCAGGCGGATaGCCAGGAGAGTCCAGTAAG +
Preference number: 4 (lower is better)
Translates to: EEQNTLSTMVSKTATEAGQRPGG*PGESSK
Trigger: CTTACTGGACTCTCCTGGCCATCCGCCTGGCCTTTG...CCCTGCTTCTGTGGCTGTTTTGCTGACCATTGTACTCAAAGTATTTTGTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR TCA 90 bp GAAGAACAAAATACTTTGAGTACAATGGTCAGCAAAACAGCCACAGAAGCAGGGTCTCCACCCAGTTGTTaGGTAGGGCAAAAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: EEQNTLSTMVSKTATEAGSPPSC*VGQKAA
Trigger: CGCCGCTTTTTGCCCTACTCAACAACTGGGTGGAGA...CCCTGCTTCTGTGGCTGTTTTGCTGACCATTGTACTCAAAGTATTTTGTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTAAGAACAAAATCAATTaGGGGTTTGGCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVKNKIN*GFGRAP
Trigger: GGGAGCTCTGCCAAACCCCCAATTGATTTTGTTCTT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCCTTCTGCCAGCAGCTaGTCAATCCCAAACAGGCCT +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRPSASS*SIPNRP
Trigger: AGGCCTGTTTGGGATTGACCAGCTGCTGGCAGAAGG...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGAGGCCCGTTAGGATGTaGAACCAGATGCCGATGTCC +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRRPVRM*NQMPMS
Trigger: GGACATCGGCATCTGGTTCCACATCCTAACGGGCCT...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR GCA 90 bp GAAGAACAAAATACTTTGAGTACAATGGTCAGCAAAACAGCCACAGAAGCAGGGAGGCCTTTCTTCTCGTaGCCATATGGAGTCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EEQNTLSTMVSKTATEAGRPFFS*PYGVLA
Trigger: GGCCAAGACTCCATATGGGCACGAGAAGAAAGGCCT...CCCTGCTTCTGTGGCTGTTTTGCTGACCATTGTACTCAAAGTATTTTGTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGAGTTGGAGGCCTGGTTaGGTAACTCCTGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRSWRPG*VTPVEA
Trigger: TGCCTCTACAGGAGTTACCCAACCAGGCCTCCAACT...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR TCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAGCTACGAAGATGGTaGCGAATCCAAACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRQLRRW*RIQTAA
Trigger: TGCTGCAGTTTGGATTCGTCACCATCTTCGTAGCTG...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CCA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGTTCGTGGGGTTCTCTTaGTTCCTCAGGTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRFVGFS*FLRSSS
Trigger: GGAAGAAGACCTGAGGAACCAAGAGAACCCCACGAA...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp AAGGCATTGCTGATGACCGCGAGGTGTGTGAGGCCCGTTAGGATGTaGAACCAGATGCCGATGTCCTGGGCGCGCTCCGCCACTGGGCGC +
Preference number: 5 (lower is better)
Translates to: KALLMTARCVRPVRM*NQMPMSWARSATGR
Trigger: GCGCCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTGGTTCCACATCCTAACGGGCCTCACACACCTCGCGGTCATCAGCAATGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp AGGTGTGTGAGGCCCGTTAGGATGTGGAACCAGATGCCGATGTCCTaGGCGCGCTCCGCCACTGGGCGCCGATACTCGCACACGAACTTG +
Preference number: 5 (lower is better)
Translates to: RCVRPVRMWNQMPMS*ARSATGRRYSHTNL
Trigger: CAAGTTCGTGTGCGAGTATCGGCGCCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTGGTTCCACATCCTAACGGGCCTCACACACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 90 bp GCAGCAACTCATAGTCGGCCTCCCAAGGTGCTGGGTGGGTCCCCGTaGCAGCCTTCTTGCCCCTGGAGAACTTCTGCCAGCAGCCTTTCA +
Preference number: 5 (lower is better)
Translates to: AATHSRPPKVLGGSP*QPSCPWRTSASSLS
Trigger: TGAAAGGCTGCTGGCAGAAGTTCTCCAGGGGCAAGAAGGCTGGCACGGGGACCCACCCAGCACCTTGGGAGGCCGACTATGAGTTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTCTGTCATGGGGGCCGTaGCAGCGAACTGGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGLSWGP*QRTGAE
Trigger: CTCGGCCCCAGTTCGCTGCAACGGCCCCCATGACAG...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 90 bp TGCTGGGGGCCACCTGCTGTTTACCTGCCTCTGAGGCTTGGGCTGTaGTCCCATAGGAGCATCCATTCCCTGCTTCAGGGGAGGCCATGT +
Preference number: 5 (lower is better)
Translates to: CWGPPAVYLPLRLGL*SHRSIHSLLQGRPC
Trigger: ACATGGCCTCCCCTGAAGCAGGGAATGGATGCTCCTATGGGAGCACAGCCCAAGCCTCAGAGGCAGGTAAACAGCAGGTGGCCCCCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS TCA 90 bp AGAGCTCCCAACTCTGCTGGGGGCCACCTGCTGTTTACCTGCCTCTaGGGCTTGGGCTGTGCTCCCATAGGAGCATCCATTCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: RAPNSAGGHLLFTCL*GLGCAPIGASIPCF
Trigger: GAAGCAGGGAATGGATGCTCCTATGGGAGCACAGCCCAAGCCTCAGAGGCAGGTAAACAGCAGGTGGCCCCCAGCAGAGTTGGGAGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp GGATATTGGGGATGCCCAGCCACTCCAGAAGGGTGGCTGACCAGTTaGAGGCCTGGTTGGGTAACTCCTGTAGAGGCAGCTTCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: GYWGCPATPEGWLTS*RPGWVTPVEAASGA
Trigger: TGCGCCTGAAGCTGCCTCTACAGGAGTTACCCAACCAGGCCTCCAACTGGTCAGCCACCCTTCTGGAGTGGCTGGGCATCCCCAATATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp CGTGCTCCAGCAGGATATTGGGGATGCCCAGCCACTCCAGAAGGGTaGCTGACCAGTTGGAGGCCTGGTTGGGTAACTCCTGTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: RAPAGYWGCPATPEG*LTSWRPGWVTPVEA
Trigger: TGCCTCTACAGGAGTTACCCAACCAGGCCTCCAACTGGTCAGCCACCCTTCTGGAGTGGCTGGGCATCCCCAATATCCTGCTGGAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS TCA 90 bp ACTTGCCCCAGCGAGCCCAGTGCTGGAATAAGACTTGGCGTTGGATaGGACCCAGGACCTGTGAGCTCTCTGGGACTGCAGAGAATGGGC +
Preference number: 5 (lower is better)
Translates to: TCPSEPSAGIRLGVG*DPGPVSSLGLQRMG
Trigger: GCCCATTCTCTGCAGTCCCAGAGAGCTCACAGGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 90 bp CTTCAGGCGCAGGTCTTCTGCATAGTAGCAAAGCACAGCCCAGGGTaGGCGGAGGAGGATGTAATGAACTGCAGCGGCCTCATCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LQAQVFCIVAKHSPG*AEEDVMNCSGLILD
Trigger: GTCCAGGATGAGGCCGCTGCAGTTCATTACATCCTCCTCCGCGCACCCTGGGCTGTGCTTTGCTACTATGCAGAAGACCTGCGCCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTAGGGTGGCTGACCAGTaGGAGGCCTGGTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGRVADQ*EAWLGN
Trigger: GTTACCCAACCAGGCCTCCAACTGGTCAGCCACCCT...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTGGTACTTGTTCCACTaGCCCCAGCGAGCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGWYLFH*PQRAQC
Trigger: GCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCA...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGCTGTCATGGGGGCCGTaGCAGCGAACTGGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLLSWGP*QRTGAE
Trigger: CTCGGCCCCAGTTCGCTGCAACGGCCCCCATGACAG...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 90 bp GAACACCAGGAAACATCCCACCAGGAAGACCACTGTGCCCACTACTaGCGCAGGCAGGAGCCAACCAGTGTAAAACCCAAGCCAGGCGAA +
Preference number: 5 (lower is better)
Translates to: EHQETSHQEDHCAHY*RRQEPTSVKPKPGE
Trigger: TTCGCCTGGCTTGGGTTTTACACTGGTTGGCTCCTGCCTGCGGCAGTAGTGGGCACAGTGGTCTTCCTGGTGGGATGTTTCCTGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTCAGTTGGAGGCCTGGTaGGGTAACTCCTGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGQLEAW*GNSCRG
Trigger: GCCTCTACAGGAGTTACCCAACCAGGCCTCCAACTG...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GCAACTAACCATCAGTTAGCCCAGCTAACAGAAGGCAGGCAACAGGAAAGGCCCCCCGTGCCAGCCTTCTaGCCCCTGGAGAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: ATNHQLAQLTEGRQQERPPVPAF*PLENFC
Trigger: GCAGAAGTTCTCCAGGGGCAAGAAGGCTGGCACGGG...GGGCCTTTCCTGTTGCCTGCCTTCTGTTAGCTGGGCTAACTGATGGTTAGTTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGGCCAGCAGGAAGGCATaGCTGATGACCGCGAGGTGT +
Preference number: 5 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGASRKA*LMTARC
Trigger: ACACCTCGCGGTCATCAGCAATGCCTTCCTGCTGGC...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTTACCTGCAAGTGCGGTaGTGTGCGGAGGTGAAAGTG +
Preference number: 5 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGYLQVR*CAEVKV
Trigger: CACTTTCACCTCCGCACACAACCGCACTTGCAGGTA...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS TCA 90 bp CTGGGACTGCAGAGAATGGGCCGTCATGCAGAGGGAAGGCTGCACTaGATACACCTTCTGCCAGCAGCTGGTCAATCCCAAACAGGCCTT +
Preference number: 5 (lower is better)
Translates to: LGLQRMGRHAEGRLH*IHLLPAAGQSQTGL
Trigger: AAGGCCTGTTTGGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTCTGCAGTCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 90 bp GCTCTCTGGGACTGCAGAGAATGGGCCGTCATGCAGAGGGAAGGCTaGACTGAATACACCTTCTGCCAGCAGCTGGTCAATCCCAAACAG +
Preference number: 5 (lower is better)
Translates to: ALWDCREWAVMQREG*TEYTFCQQLVNPKQ
Trigger: CTGTTTGGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTCTGCAGTCCCAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp TTCCACTTGCCCCAGCGAGCCCAGTGCTGGAATAAGACTTGGCGTTaGATGAGACCCAGGACCTGTGAGCTCTCTGGGACTGCAGAGAAT +
Preference number: 5 (lower is better)
Translates to: FHLPQRAQCWNKTWR*MRPRTCELSGTAEN
Trigger: ATTCTCTGCAGTCCCAGAGAGCTCACAGGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp TACTTGTTCCACTTGCCCCAGCGAGCCCAGTGCTGGAATAAGACTTaGCGTTGGATGAGACCCAGGACCTGTGAGCTCTCTGGGACTGCA +
Preference number: 5 (lower is better)
Translates to: YLFHLPQRAQCWNKT*RWMRPRTCELSGTA
Trigger: TGCAGTCCCAGAGAGCTCACAGGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp AGAGCCACCTTCTCCCCGAAGTACCTTCGCACATGGTCCAATGGCTaGTACTTGTTCCACTTGCCCCAGCGAGCCCAGTGCTGGAATAAG +
Preference number: 5 (lower is better)
Translates to: RATFSPKYLRTWSNG*YLFHLPQRAQCWNK
Trigger: CTTATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGACCATGTGCGAAGGTACTTCGGGGAGAAGGTGGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CAAGGGGTAAGCAAACTTCCCAGGGCTGTGGCCTGGGCCATGGTATCATGTCTACAGTTGGAGGCCTGGTaGGGTAACTCCTGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: QGVSKLPRAVAWAMVSCLQLEAW*GNSCRG
Trigger: GCCTCTACAGGAGTTACCCAACCAGGCCTCCAACTG...TAGACATGATACCATGGCCCAGGCCACAGCCCTGGGAAGTTTGCTTACCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS GCA 90 bp GTAGCAAAGCACAGCCCAGGGTGCGCGGAGGAGGATGTAATGAACTaGAGCGGCCTCATCCTGGACATCATGCTGATCTATTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: VAKHSPGCAEEDVMN*SGLILDIMLIYFQA
Trigger: GGCCTGAAAATAGATCAGCATGATGTCCAGGATGAGGCCGCTGCAGTTCATTACATCCTCCTCCGCGCACCCTGGGCTGTGCTTTGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCAGGGTGGCTGACCAGTaGGAGGCCTGGTTGGGTAAC +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSRVADQ*EAWLGN
Trigger: GTTACCCAACCAGGCCTCCAACTGGTCAGCCACCCT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGGGTGTGTGGTACTTGTTCCACTaGCCCCAGCGAGCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: NSHRSRDFRQTFCLERGVWYLFH*PQRAQC
Trigger: GCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCA...CACACCCCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTACCTCCTGCACGTTATaGATGATCTGCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGTSCTL*MICLPT
Trigger: GGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGT...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp TCCAGGCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAACGTGCCAGCGTGAAATaGAGGAAGCCATGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SRQVCQPPVTPTVTSEKERASVK*RKPCRS
Trigger: TGACCTGCATGGCTTCCTCAATTTCACGCTGGCACG...TTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS CCA 90 bp CCTCAATGTCTTCATAGTCAGAACAGTCCCAGCGGTAGGCCAATGTaGCGTTTTTCCGCTTCCAGTACTCCAGAAGCAGCACCGCCCACA +
Preference number: 5 (lower is better)
Translates to: PQCLHSQNSPSGRPM*RFSASSTPEAAPPT
Trigger: TGTGGGCGGTGCTGCTTCTGGAGTACTGGAAGCGGAAAAACGCCACATTGGCCTACCGCTGGGACTGTTCTGACTATGAAGACATTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GTTCCACAGCCTTCCCCCTTCAGAGCTTCCTGTGTGCTGAGTTTCTGGCCCGGTTGCCCATATGGAGTCTaGGCCAGGATCTCAAATAGA +
Preference number: 5 (lower is better)
Translates to: VPQPSPFRASCVLSFWPGCPYGV*ARISNR
Trigger: TCTATTTGAGATCCTGGCCAAGACTCCATATGGGCA...ACCGGGCCAGAAACTCAGCACACAGGAAGCTCTGAAGGGGGAAGGCTGTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACATCCAATGGCTGGTACTaGTTCCACTTGCCCCAGCGA +
Preference number: 5 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTSNGWY*FHLPQR
Trigger: TCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGA...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CAAGGGGTAAGCAAACTTCCCAGGGCTGTGGCCTGGGCCATGGTATCATGTCTAATCTCCACCCAGTTGTaGAGTAGGGCAAAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: QGVSKLPRAVAWAMVSCLISTQL*SRAKSG
Trigger: GCCGCTTTTTGCCCTACTCAACAACTGGGTGGAGAT...TAGACATGATACCATGGCCCAGGCCACAGCCCTGGGAAGTTTGCTTACCCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGCGGATCTCCACCCAGTaGTTGAGTAGGGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGRISTQ*LSRAKS
Trigger: GCTTTTTGCCCTACTCAACAACTGGGTGGAGATCCG...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATTACCTGCAAGTGCGGTaGTGTGCGGAGGTGAAAGTG +
Preference number: 5 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNYLQVR*CAEVKV
Trigger: CACTTTCACCTCCGCACACAACCGCACTTGCAGGTA...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS GCA 90 bp CCTTTCAGCTTTGGGACAAGAACCTCCTGCACGTTATTGATGATCTaGTTGCCCACCATGATGACCAGGAGCTCCTGTGCCAGCTCACTG +
Preference number: 5 (lower is better)
Translates to: PFSFGTRTSCTLLMI*LPTMMTRSSCASSL
Trigger: CAGTGAGCTGGCACAGGAGCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp TCATGCAGAGGGAAGGCTGCACTGAATACACCTTCTGCCAGCAGCTaGTCAATCCCAAACAGGCCTTTCTTCTCGTGCCCATATGGAGTC +
Preference number: 5 (lower is better)
Translates to: SCRGKAALNTPSASS*SIPNRPFFSCPYGV
Trigger: GACTCCATATGGGCACGAGAAGAAAGGCCTGTTTGGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGTGCAGCCTTCCCTCTGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp AGCCTTCTTGCCCCTGGAGAACTTCTGCCAGCAGCCTTTCAGCTTTaGGACAAGAACCTCCTGCACGTTATTGATGATCTGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: SLLAPGELLPAAFQL*DKNLLHVIDDLLAH
Trigger: GTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGCTGGCAGAAGTTCTCCAGGGGCAAGAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CATGTAGCAGGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTAGAAACCATTGCAGCTaGCTTGCTTTGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: HVAGVVTEHRTVAAKGHGRNHCS*LALNWQ
Trigger: CTGCCAGTTCAAAGCAAGCAAGCTGCAATGGTTTCT...ACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCCTGCTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACACACAATGACACAGCTCCTGCGTaGGTATGTCTGAGAACACCA +
Preference number: 5 (lower is better)
Translates to: GWRWLSWGQDHGLQKTHNDTAPA*VCLRTP
Trigger: TGGTGTTCTCAGACATACCAACGCAGGAGCTGTGTC...ATTGTGTGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGTGGAAGATGAACACCTaGAGGGTGAAGGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGWKMNT*RVKASS
Trigger: TGAGGATGCCTTCACCCTCAAGGTGTTCATCTTCCA...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCTACCTGCAAGTGCGGTaGTGTGCGGAGGTGAAAGTG +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSYLQVR*CAEVKV
Trigger: CACTTTCACCTCCGCACACAACCGCACTTGCAGGTA...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS-3UTR CAA 90 bp GGGGTAGTGACTGAGCACAGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACATCCTTCACTCCTGTaGCTCCAAGGAGAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: GVVTEHRTVAAKGHGYSKHPSLL*LQGEPR
Trigger: ACGAGGCTCTCCTTGGAGCAACAGGAGTGAAGGATG...TTTAGAATAACCATGACCCTTGGCTGCCACAGTCCTGTGCTCAGTCACTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS GCA 90 bp GAGAACTTCTGCCAGCAGCCTTTCAGCTTTGGGACAAGAACCTCCTaGACGTTATTGATGATCTGCTTGCCCACCATGATGACCAGGAGC +
Preference number: 5 (lower is better)
Translates to: ENFCQQPFSFGTRTS*TLLMICLPTMMTRS
Trigger: GCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGCTGGCAGAAGTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AACCAAGGGTGGAGATGGTTGAGCTGGGGCCAGGATCATGGTCTCCAAAAGACATGGAAGATGAACACCTaGAGGGTGAAGGCATCCTCA +
Preference number: 5 (lower is better)
Translates to: NQGWRWLSWGQDHGLQKTWKMNT*RVKASS
Trigger: TGAGGATGCCTTCACCCTCAAGGTGTTCATCTTCCA...TGTCTTTTGGAGACCATGATCCTGGCCCCAGCTCAACCATCTCCACCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCACCTCCTGCACGTTATaGATGATCTGCTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSTSCTL*MICLPT
Trigger: GGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCATCTCCACCCAGTTGTaGAGTAGGGCAAAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSISTQL*SRAKSG
Trigger: GCCGCTTTTTGCCCTACTCAACAACTGGGTGGAGAT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCCGGATCTCCACCCAGTaGTTGAGTAGGGCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSRISTQ*LSRAKS
Trigger: GCTTTTTGCCCTACTCAACAACTGGGTGGAGATCCG...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGTATTCCCGCTTCACCTaGATCTCCACGGATTCTGGG +
Preference number: 5 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLYSRFT*ISTDSG
Trigger: CCCAGAATCCGTGGAGATCAAGGTGAAGCGGGAATA...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCTATTCCCGCTTCACCTaGATCTCCACGGATTCTGGG +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSYSRFT*ISTDSG
Trigger: CCCAGAATCCGTGGAGATCAAGGTGAAGCGGGAATA...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 90 bp GAAAAGTCTCCCGCCAGACCTCGTGTGTGTCTGTCTTGTCCTTCGTaGGGTTCTCTTGGTTCCTCAGGTCTTCTTCCCAAACAAGAACAA +
Preference number: 5 (lower is better)
Translates to: EKSPARPRVCLSCPS*GSLGSSGLLPKQEQ
Trigger: TTGTTCTTGTTTGGGAAGAAGACCTGAGGAACCAAGAGAACCCCACGAAGGACAAGACAGACACACACGAGGTCTGGCGGGAGACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GAGAGGGGTGTGGACATCGGGAGGGGAATGAGACACAAGTTATTGGCTCATGGGAAGAAGGTGTCTTGGTaGTCACTCCCAAGAAACCAT +
Preference number: 5 (lower is better)
Translates to: ERGVDIGRGMRHKLLAHGKKVSW*SLPRNH
Trigger: ATGGTTTCTTGGGAGTGACAACCAAGACACCTTCTT...CCCATGAGCCAATAACTTGTGTCTCATTCCCCTCCCGATGTCCACACCCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp TCCAGGCAAGTGTGTCAGCCTCCGGTAACCCCTACTGTGACCTCAGAGAAGGAAAAGAAGGTGTCTTGGTaGTCACTCCCAAGAAACCAT +
Preference number: 5 (lower is better)
Translates to: SRQVCQPPVTPTVTSEKEKKVSW*SLPRNH
Trigger: ATGGTTTCTTGGGAGTGACAACCAAGACACCTTCTT...TTCCTTCTCTGAGGTCACAGTAGGGGTTACCGGAGGCTGACACACTTGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCCCGTGCCAGCCTTCTaGCCCCTGGAGAACTTCTGC +
Preference number: 5 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRPVPAF*PLENFC
Trigger: GCAGAAGTTCTCCAGGGGCAAGAAGGCTGGCACGGG...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp ACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAAGTGTGTGCCAGCAGGAAGGCATaGCTGATGACCGCGAGGTGT +
Preference number: 5 (lower is better)
Translates to: TIVNCLLTHLQQSSRQVCASRKA*LMTARC
Trigger: ACACCTCGCGGTCATCAGCAATGCCTTCCTGCTGGC...ACACACTTGCCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CAGCAAAACAGCCACAGAAGCAGGGATTTCAGACAGACCTTTTGCCTTGAGAGGCATCCTTCACTCCTGTaGCTCCAAGGAGAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: QQNSHRSRDFRQTFCLERHPSLL*LQGEPQ
Trigger: TTGAGGCTCTCCTTGGAGCAACAGGAGTGAAGGATG...CCTCTCAAGGCAAAAGGTCTGTCTGAAATCCCTGCTTCTGTGGCTGTTTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190340.2
CDS CCA 90 bp CGCCAGACCTCGTGTGTGTCTGTCTTGTCCTTCGTGGGGTTCTCTTaGTTCCTCAGGTCTTCTTCCCAAACAAGAACAAAATCAATTGGG +
Preference number: 5 (lower is better)
Translates to: RQTSCVSVLSFVGFS*FLRSSSQTRTKSIG
Trigger: CCCAATTGATTTTGTTCTTGTTTGGGAAGAAGACCTGAGGAACCAAGAGAACCCCACGAAGGACAAGACAGACACACACGAGGTCTGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCAAGTGTGTCAGCCTCCGGGTGAAGAAGGTGTCTaGGTTGTCACTCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: NCLLTHLQQSSRQVCQPPGEEGV*VVTPKK
Trigger: TTTCTTGGGAGTGACAACCAAGACACCTTCTTCACC...CGGAGGCTGACACACTTGCCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp GGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGTTATTGATGATCTGCTaGCCCACCATGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: GLWQPRVMVILNQGWRWLLLMIC*PTMMTR
Trigger: CCTGGTCATCATGGTGGGCAAGCAGATCATCAATAA...CAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCTTATTGATGATCTGCTaGCCCACCATGATGACCAGG +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSLLMIC*PTMMTR
Trigger: CCTGGTCATCATGGTGGGCAAGCAGATCATCAATAA...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp CTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGAGCACTCCCAAGAAACCATaGCAGCTTGCTTGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LWQPRVMVILNQGWRWLSTPKKP*QLACFE
Trigger: TTCAAAGCAAGCAAGCTGCAATGGTTTCTTGGGAGT...GCTCAACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTGGTGAAGAAGGTGTCTaGGTTGTCACTCCCAAGAAA +
Preference number: 5 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVGEEGV*VVTPKK
Trigger: TTTCTTGGGAGTGACAACCAAGACACCTTCTTCACC...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTTGCCCATATGGAGTCTaGGCCAGGATCTCAAATAGA +
Preference number: 5 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVCPYGV*ARISNR
Trigger: TCTATTTGAGATCCTGGCCAAGACTCCATATGGGCA...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AGGACTGTGGCAGCCAAGGGTCATGGTTATTCTAAACCAAGGGTGGAGATGGTTACTCCCAAGAAACCATaGCAGCTTGCTTGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: RTVAAKGHGYSKPRVEMVTPKKP*QLACFE
Trigger: TTCAAAGCAAGCAAGCTGCAATGGTTTCTTGGGAGT...AACCATCTCCACCCTTGGTTTAGAATAACCATGACCCTTGGCTGCCACAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGTCCAATGGCTGGTACTaGTTCCACTTGCCCCAGCGA +
Preference number: 5 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRSNGWY*FHLPQR
Trigger: TCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGA...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGCGTGCCAGCGTGAAATaGAGGAAGCCATGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRRASVK*RKPCRS
Trigger: TGACCTGCATGGCTTCCTCAATTTCACGCTGGCACG...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS-3UTR CAA 90 bp AAAAGACACACAATAGTGAACTGTCTCCTGACACATCTTCAACAGTCTTCCAGGGACACAGCTCCTGCGTaGGTATGTCTGAGAACACCA +
Preference number: 5 (lower is better)
Translates to: KRHTIVNCLLTHLQQSSRDTAPA*VCLRTP
Trigger: TGGTGTTCTCAGACATACCAACGCAGGAGCTGTGTC...CCTGGAAGACTGTTGAAGATGTGTCAGGAGACAGTTCACTATTGTGTGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp GAACCAGATGCCGATGTCCTGGGCGCGCTCCGCCACTaGGCGCCGATACTCGCACACGAACTTGCGCGCATC +
Preference number: 6 (lower is better)
Translates to: EPDADVLGALRH*APILAHELARI
Trigger: GATGCGCGCAAGTTCGTGTGCGAGTATCGGCGCCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp AGGCCCGTTAGGATGTGGAACCAGATGCCGATGTCCTaGGCGCGCTCCGCCACTGGGCGCCGATACTCGCAC +
Preference number: 6 (lower is better)
Translates to: RPVRMWNQMPMS*ARSATGRRYSH
Trigger: GTGCGAGTATCGGCGCCCAGTGGCGGAGCGCGCCCAGGACATCGGCATCTGGTTCCACATCCTAACGGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp CATAGTCGGCCTCCCAAGGTGCTGGGTGGGTCCCCGTaGCAGCCTTCTTGCCCCTGGAGAACTTCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: HSRPPKVLGGSP*QPSCPWRTSAS
Trigger: GCTGGCAGAAGTTCTCCAGGGGCAAGAAGGCTGGCACGGGGACCCACCCAGCACCTTGGGAGGCCGACTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp CTGATGACCGCGAGGTGTGTGAGGCCCGTTAGGATGTaGAACCAGATGCCGATGTCCTGGGCGCGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: LMTARCVRPVRM*NQMPMSWARSA
Trigger: GGCGGAGCGCGCCCAGGACATCGGCATCTGGTTCCACATCCTAACGGGCCTCACACACCTCGCGGTCATCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 90 bp TCCTGGGCGCGCTCCGCCACTGGGCGCCGATACTCGCACACGAACTaGCGCGCATCTAGGCGGATCTCCACCCAGTTGTTGAGTAGGGCA +
Preference number: 6 (lower is better)
Translates to: SWARSATGRRYSHTN*RASRRISTQLLSRA
Trigger: TGCCCTACTCAACAACTGGGTGGAGATCCGCCTAGATGCGCGCAAGTTCGTGTGCGAGTATCGGCGCCCAGTGGCGGAGCGCGCCCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp CTCACAAGGCAGCAACTCATAGTCGGCCTCCCAAGGTaGTGGGTGGGTCCCCGTGCCAGCCTTCTTGCCCCT +
Preference number: 6 (lower is better)
Translates to: LTRQQLIVGLPR*WVGPRASLLAP
Trigger: AGGGGCAAGAAGGCTGGCACGGGGACCCACCCAGCACCTTGGGAGGCCGACTATGAGTTGCTGCCTTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp CGCTCCGCCACTGGGCGCCGATACTCGCACACGAACTaGCGCGCATCTAGGCGGATCTCCACCCAGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RSATGRRYSHTN*RASRRISTQLL
Trigger: CAACAACTGGGTGGAGATCCGCCTAGATGCGCGCAAGTTCGTGTGCGAGTATCGGCGCCCAGTGGCGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp AGTGCCATGAACAAACTGAAGAAGACGGTGCCGCCATaGTCGAAGAGCCGCCCAGCCTGGGCCAGGGTGCAG +
Preference number: 6 (lower is better)
Translates to: SAMNKLKKTVPP*SKSRPAWARVQ
Trigger: CTGCACCCTGGCCCAGGCTGGGCGGCTCTTCGACCATGGCGGCACCGTCTTCTTCAGTTTGTTCATGGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp GAGGTGAAAGTGGGCGGTGCTCGTGCCAGCGTGAAATaGAGGAAGCCATGCAGGTCAGGGGCGTGCGTCCAG +
Preference number: 6 (lower is better)
Translates to: EVKVGGARASVK*RKPCRSGACVQ
Trigger: CTGGACGCACGCCCCTGACCTGCATGGCTTCCTCAATTTCACGCTGGCACGAGCACCGCCCACTTTCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp GGCTTGGGCTGTGCTCCCATAGGAGCATCCATTCCCTaGTTCAGGGGAGGCCATGTCGATCAGCACCACGCT +
Preference number: 6 (lower is better)
Translates to: GLGCAPIGASIP*FRGGHVDQHHA
Trigger: AGCGTGGTGCTGATCGACATGGCCTCCCCTGAAGCAGGGAATGGATGCTCCTATGGGAGCACAGCCCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp GCGGTTGTGTGCGGAGGTGAAAGTGGGCGGTGCTCGTaGCAGCGTGAAATTGAGGAAGCCATGCAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: AVVCGGESGRCS*QREIEEAMQVR
Trigger: CCTGACCTGCATGGCTTCCTCAATTTCACGCTGGCACGAGCACCGCCCACTTTCACCTCCGCACACAACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 90 bp CCTGTGAGGCTGGCAATCCGTGAAGCCCAGGCAGAGAGGAAGGCGTaGTCTGACCTGGACACAATGATAGCCATGACGGCCCGGTACAGG +
Preference number: 6 (lower is better)
Translates to: PVRLAIREAQAERKA*SDLDTMIAMTARYR
Trigger: CCTGTACCGGGCCGTCATGGCTATCATTGTGTCCAGGTCAGACAACGCCTTCCTCTCTGCCTGGGCTTCACGGATTGCCAGCCTCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp CCCCAGCGAGCCCAGTGCTGGAATAAGACTTGGCGTTaGATGAGACCCAGGACCTGTGAGCTCTCTGGGACT +
Preference number: 6 (lower is better)
Translates to: PQRAQCWNKTWR*MRPRTCELSGT
Trigger: AGTCCCAGAGAGCTCACAGGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp AGGGTGAAGGCATCCTCAAACTCGGTCTGTGTCCGGTaGATCTCCCATCTTGTTAGGACCTGGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: RVKASSNSVCVR*ISHLVRTWARS
Trigger: GCTCCTGGCCCAGGTCCTAACAAGATGGGAGATGCACCGGACACAGACCGAGTTTGAGGATGCCTTCACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp CACTTGCCCCAGCGAGCCCAGTGCTGGAATAAGACTTaGCGTTGGATGAGACCCAGGACCTGTGAGCTCTCT +
Preference number: 6 (lower is better)
Translates to: HLPQRAQCWNKT*RWMRPRTCELS
Trigger: AGAGAGCTCACAGGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp TTCTCCCCGAAGTACCTTCGCACATGGTCCAATGGCTaGTACTTGTTCCACTTGCCCCAGCGAGCCCAGTGC +
Preference number: 6 (lower is better)
Translates to: FSPKYLRTWSNG*YLFHLPQRAQC
Trigger: GCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGACCATGTGCGAAGGTACTTCGGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp GCTGGAAGACCCAGGCTGGGCTCTGAACTTGGAGGTTaGTCATCCTTCACTCCTGTTGCTCCAAGGAGAGCC +
Preference number: 6 (lower is better)
Translates to: AGRPRLGSELGG*SSFTPVAPRRA
Trigger: GGCTCTCCTTGGAGCAACAGGAGTGAAGGATGACCAACCTCCAAGTTCAGAGCCCAGCCTGGGTCTTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000186641.7
ENSMUST00000190340.2
CDS CAA 72 bp CTGGCAATCCGTGAAGCCCAGGCAGAGAGGAAGGCGTaGTCTGACCTGGACACAATGATAGCCATGACGGCC +
Preference number: 6 (lower is better)
Translates to: LAIREAQAERKA*SDLDTMIAMTA
Trigger: GGCCGTCATGGCTATCATTGTGTCCAGGTCAGACAACGCCTTCCTCTCTGCCTGGGCTTCACGGATTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS TCA 72 bp GAGCACAGCGGGCACATGTCGAAGCTGTCTGAGCTGTaGCACAGCTCCTGCGTTGGTATGTCTGAGAACACC +
Preference number: 6 (lower is better)
Translates to: EHSGHMSKLSEL*HSSCVGMSENT
Trigger: GGTGTTCTCAGACATACCAACGCAGGAGCTGTGTCACAGCTCAGACAGCTTCGACATGTGCCCGCTGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp CACAGCCCAGGGTGCGCGGAGGAGGATGTAATGAACTaGAGCGGCCTCATCCTGGACATCATGCTGATCTAT +
Preference number: 6 (lower is better)
Translates to: HSPGCAEEDVMN*SGLILDIMLIY
Trigger: ATAGATCAGCATGATGTCCAGGATGAGGCCGCTGCAGTTCATTACATCCTCCTCCGCGCACCCTGGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp TGTGAGCTCTCTGGGACTGCAGAGAATGGGCCGTCATaGAGAGGGAAGGCTGCACTGAATACACCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: CELSGTAENGPS*RGKAALNTPSA
Trigger: GGCAGAAGGTGTATTCAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTCTGCAGTCCCAGAGAGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp GAAACATCCCACCAGGAAGACCACTGTGCCCACTACTaGCGCAGGCAGGAGCCAACCAGTGTAAAACCCAAG +
Preference number: 6 (lower is better)
Translates to: ETSHQEDHCAHY*RRQEPTSVKPK
Trigger: CTTGGGTTTTACACTGGTTGGCTCCTGCCTGCGGCAGTAGTGGGCACAGTGGTCTTCCTGGTGGGATGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp TGGTACTTGTTCCACTTGCCCCAGCGAGCCCAGTGCTaGAATAAGACTTGGCGTTGGATGAGACCCAGGACC +
Preference number: 6 (lower is better)
Translates to: WYLFHLPQRAQC*NKTWRWMRPRT
Trigger: GGTCCTGGGTCTCATCCAACGCCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp CCGAAGTACCTTCGCACATGGTCCAATGGCTGGTACTaGTTCCACTTGCCCCAGCGAGCCCAGTGCTGGAAT +
Preference number: 6 (lower is better)
Translates to: PKYLRTWSNGWY*FHLPQRAQCWN
Trigger: ATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGACCATGTGCGAAGGTACTTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 90 bp ACCTTCTCCCCGAAGTACCTTCGCACATGGTCCAATGGCTGGTACTaGTTCCACTTGCCCCAGCGAGCCCAGTGCTGGAATAAGACTTGG +
Preference number: 6 (lower is better)
Translates to: TFSPKYLRTWSNGWY*FHLPQRAQCWNKTW
Trigger: CCAAGTCTTATTCCAGCACTGGGCTCGCTGGGGCAAGTGGAACAAGTACCAGCCATTGGACCATGTGCGAAGGTACTTCGGGGAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS TCA 72 bp CAGAGAATGGGCCGTCATGCAGAGGGAAGGCTGCACTaGATACACCTTCTGCCAGCAGCTGGTCAATCCCAA +
Preference number: 6 (lower is better)
Translates to: QRMGRHAEGRLH*IHLLPAAGQSQ
Trigger: TTGGGATTGACCAGCTGCTGGCAGAAGGTGTATTCAGTGCAGCCTTCCCTCTGCATGACGGCCCATTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp GGGACAAGAACCTCCTGCACGTTATTGATGATCTGCTaGCCCACCATGATGACCAGGAGCTCCTGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: GTRTSCTLLMIC*PTMMTRSSCAS
Trigger: GCTGGCACAGGAGCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 90 bp TGCCAGCAGCCTTTCAGCTTTGGGACAAGAACCTCCTGCACGTTATaGATGATCTGCTTGCCCACCATGATGACCAGGAGCTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: CQQPFSFGTRTSCTL*MICLPTMMTRSSCA
Trigger: GGCACAGGAGCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp AGAAAAGTCTCCCGCCAGACCTCGTGTGTGTCTGTCTaGTCCTTCGTGGGGTTCTCTTGGTTCCTCAGGTCT +
Preference number: 6 (lower is better)
Translates to: RKVSRQTSCVSV*SFVGFSWFLRS
Trigger: AGACCTGAGGAACCAAGAGAACCCCACGAAGGACAAGACAGACACACACGAGGTCTGGCGGGAGACTTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp GCTCTGAACTTGGAGGTTGGTCATCCTTCACTCCTGTaGCTCCAAGGAGAGCCTCGTTCTCAGCCAGTGCTT +
Preference number: 6 (lower is better)
Translates to: ALNLEVGHPSLL*LQGEPRSQPVL
Trigger: AAGCACTGGCTGAGAACGAGGCTCTCCTTGGAGCAACAGGAGTGAAGGATGACCAACCTCCAAGTTCAGAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000186641.7
CDS CAA 90 bp TTCAGCTTTGGGACAAGAACCTCCTGCACGTTATTGATGATCTGCTaGCCCACCATGATGACCAGGAGCTCCTGTGCCAGCTCACTGAGG +
Preference number: 6 (lower is better)
Translates to: FSFGTRTSCTLLMIC*PTMMTRSSCASSLR
Trigger: CCTCAGTGAGCTGGCACAGGAGCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp TTTGGGACAAGAACCTCCTGCACGTTATTGATGATCTaGTTGCCCACCATGATGACCAGGAGCTCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: FGTRTSCTLLMI*LPTMMTRSSCA
Trigger: GGCACAGGAGCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp CTTCATAGTCAGAACAGTCCCAGCGGTAGGCCAATGTaGCGTTTTTCCGCTTCCAGTACTCCAGAAGCAGCA +
Preference number: 6 (lower is better)
Translates to: LHSQNSPSGRPM*RFSASSTPEAA
Trigger: TGCTGCTTCTGGAGTACTGGAAGCGGAAAAACGCCACATTGGCCTACCGCTGGGACTGTTCTGACTATGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp GCCCCTGGAGAACTTCTGCCAGCAGCCTTTCAGCTTTaGGACAAGAACCTCCTGCACGTTATTGATGATCTG +
Preference number: 6 (lower is better)
Translates to: APGELLPAAFQL*DKNLLHVIDDL
Trigger: CAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGCTGGCAGAAGTTCTCCAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 90 bp AGATTCTCCAGAAAAGTCTCCCGCCAGACCTCGTGTGTGTCTGTCTaGTCCTTCGTGGGGTTCTCTTGGTTCCTCAGGTCTTCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: RFSRKVSRQTSCVSV*SFVGFSWFLRSSSQ
Trigger: TTGGGAAGAAGACCTGAGGAACCAAGAGAACCCCACGAAGGACAAGACAGACACACACGAGGTCTGGCGGGAGACTTTTCTGGAGAATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS GCA 72 bp TGCCAGCAGCCTTTCAGCTTTGGGACAAGAACCTCCTaGACGTTATTGATGATCTGCTTGCCCACCATGATG +
Preference number: 6 (lower is better)
Translates to: CQQPFSFGTRTS*TLLMICLPTMM
Trigger: CATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGGCTGCTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp TCCTCAGGTCTTCTTCCCAAACAAGAACAAAATCAATaGGGGGTTTGGCAGAGCTCCCAACTCTGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: SSGLLPKQEQNQ*GVWQSSQLCWG
Trigger: CCCCCAGCAGAGTTGGGAGCTCTGCCAAACCCCCAATTGATTTTGTTCTTGTTTGGGAAGAAGACCTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp CCTTTCAGCTTTGGGACAAGAACCTCCTGCACGTTATaGATGATCTGCTTGCCCACCATGATGACCAGGAGC +
Preference number: 6 (lower is better)
Translates to: PFSFGTRTSCTL*MICLPTMMTRS
Trigger: GCTCCTGGTCATCATGGTGGGCAAGCAGATCATCAATAACGTGCAGGAGGTTCTTGTCCCAAAGCTGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CCA 72 bp CAAACAGGCCTTTCTTCTCGTGCCCATATGGAGTCTTaGCCAGGATCTCAAATAGAATCTGATGCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: QTGLSSRAHMES*PGSQIESDASW
Trigger: CCAAGAGGCATCAGATTCTATTTGAGATCCTGGCCAAGACTCCATATGGGCACGAGAAGAAAGGCCTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7
CDS CAA 72 bp AATCTGATGCCTCTTGGTGCTGGTGAAGAAGGTGTCTaGGTTGTCACTCCCAAGAAACCATTGCAGCTTGCT +
Preference number: 6 (lower is better)
Translates to: NLMPLGAGEEGV*VVTPKKPLQLA
Trigger: AGCAAGCTGCAATGGTTTCTTGGGAGTGACAACCAAGACACCTTCTTCACCAGCACCAAGAGGCATCAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000058682.11
ENSMUST00000186641.7