Pregenerated sensors for ANO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074968Ensembl transcript IDs: ENSMUST00000099623.10, ENSMUST00000140777.2
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGCATGCTACGCACACTACCACTGAGCTACATCCCCAGATCACGTaGAAGACGTTAGAGTCCCAGGCTGTCTGCCTGGCTCAGAACCAT | + |
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Preference number: 1 (lower is better) Translates to: MHATHTTTELHPQIT*KTLESQAVCLAQNH Trigger: ATGGTTCTGAGCCAGGCAGACAGCCTGGGACTCTAACGTCTTCCACGTGATCTGGGGATGTAGCTCAGTGGTAGTGTGCGTAGCATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR TCA 90 bp | GGCAGCAGTGGCTCACCTAGAAGTGCATACACAGACTCAGAGGACTaGGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGT | + |
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Preference number: 1 (lower is better) Translates to: GSSGSPRSAYTDSED*ELLQRRLRTAYTTC Trigger: ACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATGCACTTCTAGGTGAGCCACTGCTGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 90 bp | CCAAGTAGCATTTTACAATATAGTTTACCAAGTATGCCTTTCTCTTaGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTAACG | + |
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Preference number: 1 (lower is better) Translates to: PSSILQYSLPSMPFS*IPSAFQVSHSCTLT Trigger: CGTTAGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATACTTGGTAAACTATATTGTAAAATGCTACTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 90 bp | GAGAAGACTCAGAACGGCTTACACAACTTGTCAAGGCAGACCGCATaGATGTATCCATTAGTTGTTAGCATAAAAAGACAACAAGAATAT | + |
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Preference number: 1 (lower is better) Translates to: EKTQNGLHNLSRQTA*MYPLVVSIKRQQEY Trigger: ATATTCTTGTTGTCTTTTTATGCTAACAACTAATGGATACATGCATGCGGTCTGCCTTGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 90 bp | ATGATGTATTCCCAAGTAGCATTTTACAATATAGTTTACCAAGTATaGCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCT | + |
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Preference number: 1 (lower is better) Translates to: MMYSQVAFYNIVYQV*LSLGSHLPSKCLIP Trigger: AGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATACTTGGTAAACTATATTGTAAAATGCTACTTGGGAATACATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCCAGAGCCTGGCTCCTTaGCATCCAGTTGCAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: DFYNIPCSFTPGRSLYFAQSLAP*HPVAAL Trigger: AAGGGCTGCAACTGGATGGCAAGGAGCCAGGCTCTG...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR TCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCAACACAGAACTCCCCTaGAGGCTTGCTCTGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: DFYNIPCSFTPGRSLYFANTELP*RLALRI Trigger: GATTCTCAGAGCAAGCCTTCAGGGGAGTTCTGTGTT...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCCTAACTCCCATAGGCTaGTATGATGTATTCCCAAGT | + |
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Preference number: 2 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGLTPIG*YDVFPS Trigger: ACTTGGGAATACATCATAGCAGCCTATGGGAGTTAG...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGTCCTTGCCATCCAGTTaGAGCCCTTTGGAGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKSLPSS*SPLEVT Trigger: TGTGACCTCCAAAGGGCTGCAACTGGATGGCAAGGA...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCAGTATGCCTTTCTCTTaGATCCCATCTGCCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFSMPFS*IPSAFQ Trigger: TTGGAAGGCAGATGGGATCCAAGAGAAAGGCATACT...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGCTGAGAATCAGAGCCTaGCTCCTTGCCATCCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKLRIRA*LLAIQL Trigger: CAACTGGATGGCAAGGAGCCAGGCTCTGATTCTCAG...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGACTCCCCTGAAGGCTTaGTCTGAGAATCAGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RLCQESFSIQVESHHAARTPLKA*SENQSL Trigger: CAGGCTCTGATTCTCAGAGCAAGCCTTCAGGGGAGT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTAACAAAAATGGGCAGTaGACTTGGCTCTGGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: HTQTQRTENYYREDSERLNKNGQ*TWLWVI Trigger: TATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTT...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CAA 90 bp | TCCCTGGAAATTTCACCACTATGTTTCCTATTTGTTCTGCAGCTATaGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLEISPLCFLFVLQL*EQNGLKTQNSPEGL Trigger: CAAGCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAAATAGGAAACATAGTGGTGAAATTTCCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CAA 90 bp | GGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTaGTCAAGGCAGACCGCATGCATGTATCCATTAGTTGTTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: GLRTTTEKTQNGLHN*SRQTACMYPLVVSI Trigger: TATGCTAACAACTAATGGATACATGCATGCGGTCTGCCTTGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTCAAGTGTCTCATTCCTaGACACTAACGGTACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: EQHSHHPEFLRIVCAINLQVSHS*TLTVPP Trigger: GGGAGGTACCGTTAGTGTGCAGGAATGAGACACTTG...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCAATACACTGCACGCATaGATTATTCTCATTAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: DFYNIPCSFTPGRSLYFANTLHA*IILISS Trigger: TGAGCTAATGAGAATAATGCATGCGTGCAGTGTATT...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTGACACGTGTCTGTCTTaGATCCCTAATTTGGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: HTQTQRTENYYREDSERLDTCLS*IPNLEK Trigger: CTTTTCCAAATTAGGGATGCAAGACAGACACGTGTC...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCACCAGTTGCAGCCCTTTaGAGGTCACAAGTCTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSPVAAL*RSQVFY Trigger: ATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGG...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTTGTGTTTATGTGCTCTaGATGTGTGTGTTATGTGCT | + |
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Preference number: 2 (lower is better) Translates to: HTQTQRTENYYREDSERLCVYVL*MCVLCA Trigger: AGCACATAACACACACATGCAGAGCACATAAACACA...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR TCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGAAAGCTAACATACTGTaGGGGGCTGTCTGTGTTTTG | + |
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Preference number: 2 (lower is better) Translates to: RLCQESFSIQVESHHAARKANIL*GAVCVL Trigger: CAAAACACAGACAGCCCCTCACAGTATGTTAGCTTT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTCCAGTGGTGCTCTTTTaGGGAACTTGGATTTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: EQHSHHPEFLRIVCAINLPVVLF*GTWIFG Trigger: ACCAAAAATCCAAGTTCCCCAAAAGAGCACCACTGG...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR GCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAATAGTTTACCAAGTATaGCTTTCTCTTGGATCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSIVYQV*LSLGSH Trigger: ATGGGATCCAAGAGAAAGGCATACTTGGTAAACTAT...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CAA 90 bp | TCCAATGATACAATAATAGCCATTCAAATACTCGAAGTGAAGCTATaGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SNDTIIAIQILEVKL*AFVNKNGQCTWLWV Trigger: CACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAGCTTCACTTCGAGTATTTGAATGGCTATTATTGTATCATTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR TCA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGATCAGAGCCAACAACTaGTTTAACTCATTTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKIRANN*FNSFLV Trigger: CACAAGAAATGAGTTAAATCAGTTGTTGGCTCTGAT...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTTTGTTCTGCAGCTATTaGAACAGAATGGCCTCAAAA | + |
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Preference number: 2 (lower is better) Translates to: EQHSHHPEFLRIVCAINLLFCSY*NRMASK Trigger: TTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAA...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR TCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGGAATATGAAAATATATaGGCAGCATTCGCATCATCC | + |
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Preference number: 2 (lower is better) Translates to: RLCQESFSIQVESHHAAREYENI*AAFASS Trigger: GGATGATGCGAATGCTGCTCATATATTTTCATATTC...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGATAGAATTATTCCAGTaGTGCTCTTTTGGGGAACTT | + |
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Preference number: 2 (lower is better) Translates to: RLCQESFSIQVESHHAARIELFQ*CSFGEL Trigger: AAGTTCCCCAAAAGAGCACCACTGGAATAATTCTAT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CCA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTGTTGAAACTTGTCCCTaGAAATTTCACCACTATGTT | + |
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Preference number: 2 (lower is better) Translates to: KWHVHTFISMRQRQFHKPVETCP*KFHHYV Trigger: AACATAGTGGTGAAATTTCCAGGGACAAGTTTCAAC...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 72 bp | ACGCACACTACCACTGAGCTACATCCCCAGATCACGTaGAAGACGTTAGAGTCCCAGGCTGTCTGCCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: THTTTELHPQIT*KTLESQAVCLA Trigger: AGCCAGGCAGACAGCCTGGGACTCTAACGTCTTCCACGTGATCTGGGGATGTAGCTCAGTGGTAGTGTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR TCA 72 bp | GGCCTCAAAACACAGAACTCCCCTGAAGGCTTGCTCTaGGAATCAGAGCCTGGCTCCTTGCCATCCAGTTGC | + |
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Preference number: 3 (lower is better) Translates to: GLKTQNSPEGLL*ESEPGSLPSSC Trigger: GCAACTGGATGGCAAGGAGCCAGGCTCTGATTCTCAGAGCAAGCCTTCAGGGGAGTTCTGTGTTTTGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 72 bp | CAGATCACGTGGAAGACGTTAGAGTCCCAGGCTGTCTaGCTGGCTCAGAACCATAGGGGAAGTAAAGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: QITWKTLESQAV*LAQNHRGSKEV Trigger: CACTTCTTTACTTCCCCTATGGTTCTGAGCCAGGCAGACAGCCTGGGACTCTAACGTCTTCCACGTGATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR TCA 72 bp | ATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTaGAGGCTTGCTCTGAGAATCAGAGCCTGGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: IGTEWPQNTELP*RLALRIRAWLL Trigger: AAGGAGCCAGGCTCTGATTCTCAGAGCAAGCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 72 bp | TTGCAAAAGATGTGTGCTGATTTCTACAACATACCCTaGTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCC | + |
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Preference number: 3 (lower is better) Translates to: LQKMCADFYNIP*SFTPGRSLYFA Trigger: GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGCACACATCTTTTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CAA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAAAGTATGCCTTTCTCTaGGATCCCATCTGCCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSKYAFL*DPICLP Trigger: TGGAAGGCAGATGGGATCCAAGAGAAAGGCATACTT...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CAA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGAACGGCTTACACAACTaGTCAAGGCAGACCGCATGC | + |
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Preference number: 3 (lower is better) Translates to: RLCQESFSIQVESHHAARNGLHN*SRQTAC Trigger: GCATGCGGTCTGCCTTGACAAGTTGTGTAAGCCGTT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CAA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGTCCAGTTGCAGCCCTTaGGAGGTCACAAGTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKSSCSP*EVTSLL Trigger: TAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGA...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 72 bp | CTCCATAGGCTGGGACTCGGGTTACACAGTGTAAAGTaGAAACATGTAAGGAACAGTGGCATATTTACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LHRLGLGLHSVK*KHVRNSGIFTK Trigger: CTTTGTAAATATGCCACTGTTCCTTACATGTTTGCACTTTACACTGTGTAACCCGAGTCCCAGCCTATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 72 bp | TTTCACCACTATGTTTCCTATTTGTTCTGCAGCTATTaGAACAGAATGGCCTCAAAACACAGAACTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FHHYVSYLFCSY*NRMASKHRTPL Trigger: CAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAAATAGGAAACATAGTGGTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 72 bp | CCCTGGAAATTTCACCACTATGTTTCCTATTTGTTCTaGAGCTATTGGAACAGAATGGCCTCAAAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: PWKFHHYVSYLF*SYWNRMASKHR Trigger: TCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAAATAGGAAACATAGTGGTGAAATTTCCAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR-3UTR CAA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGACGAGGAAACAAAGTTaGATTGTCCTGCACTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: RLCQESFSIQVESHHAARTRKQS*IVLHCL Trigger: TAAACAGTGCAGGACAATCAAACTTTGTTTCCTCGT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 72 bp | ATTTTACAATATAGTTTACCAAGTATGCCTTTCTCTTaGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ILQYSLPSMPFS*IPSAFQVSHSC Trigger: GCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATACTTGGTAAACTATATTGTAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 72 bp | CTCTTCAAATGCATAGTCGACATAGAGCAGCATAAATaGCATGTGCATACATTCATATCAATGAGACAAAGA | + |
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Preference number: 3 (lower is better) Translates to: LFKCIVDIEQHK*HVHTFISMRQR Trigger: TCTTTGTCTCATTGATATGAATGTATGCACATGCCATTTATGCTGCTCTATGTCGACTATGCATTTGAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR GCA 72 bp | TTCCTTAGAAGTCTGAACATTCTAACTCCCATAGGCTaGTATGATGTATTCCCAAGTAGCATTTTACAATAT | + |
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Preference number: 3 (lower is better) Translates to: FLRSLNILTPIG*YDVFPSSILQY Trigger: ATATTGTAAAATGCTACTTGGGAATACATCATAGCAGCCTATGGGAGTTAGAATGTTCAGACTTCTAAGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR TCA 72 bp | AAGTATTGCAGAACATTTGGCTTCAGATTTCCTGAATaGACAAATTACAGTAACATCCTGTGTAAATGGTCT | + |
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Preference number: 3 (lower is better) Translates to: KYCRTFGFRFPE*TNYSNILCKWS Trigger: AGACCATTTACACAGGATGTTACTGTAATTTGTTCATTCAGGAAATCTGAAGCCAAATGTTCTGCAATACTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| 3UTR CCA 72 bp | TTCCAGTTTATGAACATTTATGTTGAAACTTGTCCCTaGAAATTTCACCACTATGTTTCCTATTTGTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: FQFMNIYVETCP*KFHHYVSYLFC Trigger: GCAGAACAAATAGGAAACATAGTGGTGAAATTTCCAGGGACAAGTTTCAACATAAATGTTCATAAACTGGAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS-3UTR CCA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAAGTCAGTGGCTCGGGCTaGCAGAGGCCTCCTCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LAIQLQPFGGHKSFISLEVSGSG*QRPPPL Trigger: CAGTGGAGGAGGCCTCTGCCAGCCCGAGCCACTGAC...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCGCTCAGGCTTCCCCGTaGTGGGGTTTATTACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFYNIPCSFTPGRSLYFAAQASP*WGLLPP Trigger: TGGAGGTAATAAACCCCATCACGGGGAAGCCTGAGC...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCAGATACCTATGTCAGTaGCTCGGGCTGGCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFRYLCQ*LGLAEA Trigger: GGCCTCTGCCAGCCCGAGCCACTGACATAGGTATCT...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | GCTCTGAGAATCAGAGCCTGGCTCCTTGCCATCCAGTaGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALRIRAWLLAIQ*QPFGGHKSFIS Trigger: GGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAGGAGCCAGGCTCTGATTCTCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCTGCTGTTTAAAGGACTaGATGGAGCCTGAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DFYNIPCSFTPGRSLYFACCLKD*MEPEWW Trigger: CCACCACTCAGGCTCCATTCAGTCCTTTAAACAGCA...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCGAGGTCCATGGGTTTTaGTCGGAAGGCTACTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGEVHGF*SEGYSC Trigger: ACAAGAGTAGCCTTCCGATCAAAACCCATGGACCTC...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCACCACATTCCCCAGCGTaGCCAGCGCTCATACAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSPHSPA*PALIQQ Trigger: CTGTTGTATGAGCGCTGGGCACGCTGGGGAATGTGG...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAACGTGACTTTGTCGGATaGAGGCTGATGAGGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAIQLQPFGGHKSFISLERDFVG*RLMRLR Trigger: CCTGAGCCTCATCAGCCTTCATCCGACAAAGTCACG...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCAGATGCCTGTTATTCTaGGGTCCATGGGTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGRCLLF*GPWVLI Trigger: GATCAAAACCCATGGACCTCAGAATAACAGGCATCT...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGCCGCCAGTACTGTAAGGTaGATTCATAGGGTTTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DFYNIPCSFTPGRSLYFAASTVR*IHRVWN Trigger: GTTCCAAACCCTATGAATTCACCTTACAGTACTGGC...GGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTCGAGCAGCCAGGATGTaGCAGTACTGTAAGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLRAARM*QYCKVN Trigger: ATTCACCTTACAGTACTGGCACATCCTGGCTGCTCG...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | TATGCCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTATGATGACTCCCATCTaGAGGCAGAGGTCTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YAFLLDPICLPSVSFLHTMMTPI*RQRSIR Trigger: TCTGATAGACCTCTGCCTCCAGATGGGAGTCATCAT...AGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTATTAAGTCCAGAGGCTaGTGCTTGTACCACATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLIKSRG*CLYHIP Trigger: GGGAATGTGGTACAAGCATCAGCCTCTGGACTTAAT...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAGGGGTTGGCAATTGCTaGCTCCTTCTCCAACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSGVGNC*LLLQHQ Trigger: TTGATGTTGGAGAAGGAGCCAGCAATTGCCAACCCC...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAGTAGGCTCCCTCATGTaGGGGAAATGCTGCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSVGSLM*GKCCYV Trigger: TACATAGCAGCATTTCCCCCACATGAGGGAGCCTAC...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | TACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTaGTATTTCGCCCCCTTAATTAATGCTTCCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: YNIPCSFTPGRS*YFAPLINASFE Trigger: CTCAAAGGAAGCATTAATTAAGGGGGCGAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCTTTATTATGAAGTGGTaGATCCTAGCTCTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGFIMKW*ILALLK Trigger: CTTCAGCAGAGCTAGGATTCACCACTTCATAATAAA...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | TATGCCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTGCTGTTTTCCCATTCTaGTTCAGTTCGAGGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: YAFLLDPICLPSVSFLHTAVFPF*FSSRIF Trigger: GAATATCCTCGAACTGAATCAGAATGGGAAAACAGC...AGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | TATGCCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTCAGCTTTGTCTTGGATaGAGGCTTATCTTTGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: YAFLLDPICLPSVSFLHTQLCLG*RLIFGN Trigger: GTTACCAAAGATAAGCCTGCATCCAAGACAAAGCTG...AGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAGATGTTCAGCCTCTCTaGATACTTGCACAGTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSDVQPL*ILAQCV Trigger: GACACACTGTGCAAGTATGCAGAGAGGCTGAACATC...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTCTGTCGTTGAGTCTCTaGAGTGAGCAATTCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLLSLSL*SEQFLS Trigger: TGACAAGAATTGCTCACTGCAGAGACTCAACGACAG...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTGTAGCAAACTGCCAGTaGTGTTTGACGAAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLVANCQ*CLTKFH Trigger: GTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTAC...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCGCTTTACAGATTTCTTaGCTTACTTGGCTTTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGALQIS*LTWLSF Trigger: GAACGAAAGCCAAGTAAGCCAAGAAATCTGTAAAGC...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTAGAGGCCTCCTCCACTaGGTCACAAATTTATATGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLRGLLH*VTNLYA Trigger: TGCATATAAATTTGTGACCCAGTGGAGGAGGCCTCT...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCATTTGGAACTCCAAGGTaGGCCTCTATAGTCTCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSFGTPR*ASIVSV Trigger: TACCGAGACTATAGAGGCCCACCTTGGAGTTCCAAA...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGACAGAAGTTGGAGCCTaGGATTCACTCTCAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKTEVGA*DSLSVD Trigger: GTCAACTGAGAGTGAATCTCAGGCTCCAACTTCTGT...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAAATGCAAACTGTTCCATaGCTACCAGACGGTACACTA | + |
|
Preference number: 4 (lower is better) Translates to: LAIQLQPFGGHKSFISLEMQTVP*LPDGTL Trigger: TAGTGTACCGTCTGGTAGTCATGGAACAGTTTGCAT...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCATGGATGTTCATAGGCTaGAGGTTCCAGTCATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSWMFIG*RFQSFS Trigger: GGAAAATGACTGGAACCTTCAGCCTATGAACATCCA...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCCAACATCAAGCCTTCTaGTCTCAGGTTCTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFQHQAF*SQVLFK Trigger: TTTGAAAAGAACCTGAGAGCAGAAGGCTTGATGTTG...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTGCCTCTCTGCATACTTaGACAGTGTGTCCCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLASLHT*TVCPME Trigger: TTCCATGGGACACACTGTGCAAGTATGCAGAGAGGC...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTCATCCTGTAATATTTTaGTTCAAACTGGGGGCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLHPVIF*FKLGAK Trigger: CTTCGCCCCCAGTTTGAAGCAAAATATTACAGGATG...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCAAATGTTACAGAAGTTaGAGCCTGAGATTCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFKCYRS*SLRFTL Trigger: GAGAGTGAATCTCAGGCTCCAACTTCTGTAACATTT...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCATATTTTGCTTCAAACTaGGGGCGAAGTGTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSYFASN*GRSVSS Trigger: GGAGGAAACACTTCGCCCCCAGTTTGAAGCAAAATA...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCGTCATTTTCCCATTGTaGTATGGAAGCGTCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFVIFPL*YGSVLY Trigger: ATACAAGACGCTTCCATACCACAATGGGAAAATGAC...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | ACTACTACAGAGAAGACTCAGAACGGCTTACACAACTaGTCAAGGCAGACCGCATGCATGTATCCATTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TTTEKTQNGLHN*SRQTACMYPLV Trigger: AACTAATGGATACATGCATGCGGTCTGCCTTGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAGATATCCCAGCTCCATaGAGTTGTTCCATATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSDIPAP*SCSIFA Trigger: AGCAAATATGGAACAACTTCATGGAGCTGGGATATC...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGACGGTACACTACAACTaGGAACACTGCTGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLCQESFSIQVESHHAARTVHYN*EHCCDD Trigger: GTCATCACAGCAGTGTTCGCAGTTGTAGTGTACCGT...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTTTTATTGTATTTTCCTaGGTGGCCTACGAATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLFIVFS*VAYESS Trigger: GGAAGATTCGTAGGCCACCCAGGAAAATACAATAAA...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTCACCAAAGTACATCCTaGTTAAGTCCAGAGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLHQSTS*LSPEAD Trigger: ATCAGCCTCTGGACTTAATCAGGATGTACTTTGGTG...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTCATGAAGAAGATTCCTaGGACAGACACAAGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLHEEDS*DRHKKS Trigger: CGACTTCTTGTGTCTGTCTCAGGAATCTTCTTCATG...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTGTCGGGGTTGGCAATTaGTGGCTCCTTCTCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KWHVHTFISMRQRQFHKPVGVGN*WLLLQH Trigger: ATGTTGGAGAAGGAGCCAGCAATTGCCAACCCCGAC...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | TATGCCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTAATAGCAATTACAAATaGATTGGTGATCACAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YAFLLDPICLPSVSFLHTNSNYK*IGDHSQ Trigger: TTGGCTGTGATCACCAATGCATTTGTAATTGCTATT...AGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCAACAAATATGTTACCTTaGCATAGATGCAGCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSTNMLP*HRCSCR Trigger: ACGACAGCTGCATCTATGCCAAGGTAACATATTTGT...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | ATTTCACCACTATGTTTCCTATTTGTTCTGCAGCTATaGGAACAGAATGGCCTCAAAACACAGAACTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPLCFLFVLQL*EQNGLKTQNSP Trigger: AGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAAATAGGAAACATAGTGGTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTGCACAGTGTGTCCCATaGAATGTGAATTTTAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTQRTENYYREDSERLAQCVP*NVNFNK Trigger: TTTATTAAAATTCACATTCCATGGGACACACTGTGC...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAATTCCATTTTCATATTTaGTGCGTTCCAGCATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAIQLQPFGGHKSFISLEFHFHI*CVPACD Trigger: ATCACATGCTGGAACGCACCAAATATGAAAATGGAA...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAAATTTCTTGGCTTACTTaGCTTTCGTTCATTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LAIQLQPFGGHKSFISLEISWLT*LSFIVT Trigger: AGTCACAATGAACGAAAGCCAAGTAAGCCAAGAAAT...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGGGCTTTCGTTCATTGTaGCTAATCCATAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKGFRSL*LIHRRK Trigger: TTTTCTTCTATGGATTAGTCACAATGAACGAAAGCC...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGGACTGTGGCCCATATTaGCATAAAAATAGCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLCQESFSIQVESHHAARDCGPY*HKNSEE Trigger: TTCTTCGCTATTTTTATGGCAATATGGGCCACAGTC...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTGAGATCGATCATAGTTaGCATGTTCAGATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLEIDHS*HVQIHP Trigger: TGGATGAATCTGAACATGCCAACTATGATCGATCTC...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | ACTTGTCCCTGGAAATTTCACCACTATGTTTCCTATTaGTTCTGCAGCTATTGGAACAGAATGGCCTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TCPWKFHHYVSY*FCSYWNRMASK Trigger: TTTTGAGGCCATTCTGTTCCAATAGCTGCAGAACAAATAGGAAACATAGTGGTGAAATTTCCAGGGACAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTCACATAGAGGACACATaGAGACTTCAGTGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KWHVHTFISMRQRQFHKPHIEDT*RLQWLY Trigger: GTAAAGCCACTGAAGTCTTCATGTGTCCTCTATGTG...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTCATTTTCATATTTGGTaGGTTCCAGCATGTGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLHFHIW*VPACDK Trigger: TTTATCACATGCTGGAACGCACCAAATATGAAAATG...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTATGCCAAAAACAAGATaGTCAAACACGATAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQHSHHPEFLRIVCAINLMPKTR*SNTIMK Trigger: CTTCATTATCGTGTTTGAGCATCTTGTTTTTGGCAT...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| 3UTR CAA 72 bp | ACAATAATAGCCATTCAAATACTCGAAGTGAAGCTATaGGCATTTGTTAACAAAAATGGGCAGTGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TIIAIQILEVKL*AFVNKNGQCTW Trigger: CCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAGCTTCACTTCGAGTATTTGAATGGCTATTATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR TCA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTTTACAAATGCATTGGTaGTCACAGCCAATATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KWHVHTFISMRQRQFHKPLQMHW*SQPICQ Trigger: TTGGCATATTGGCTGTGATCACCAATGCATTTGTAA...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR GCA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTCTGCTTCACATGATTTaGACAAGGGCCATATTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KWHVHTFISMRQRQFHKPLLHMI*TRAIFV Trigger: TACAAATATGGCCCTTGTGCAAATCATGTGAAGCAG...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAATGTCGGGGTTGGCAATaGCTGGCTCCTTCTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LAIQLQPFGGHKSFISLECRGWQ*LAPSPT Trigger: TGTTGGAGAAGGAGCCAGCAATTGCCAACCCCGACA...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCCCAGTCATTTTCCCATaGTGGTATGGAAGCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGPVIFP*WYGSVL Trigger: CAAGACGCTTCCATACCACAATGGGAAAATGACTGG...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCTGCAGTGAGCAATTCTaGTCACATAGAGGACACATG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGCSEQF*SHRGHM Trigger: CATGTGTCCTCTATGTGACAAGAATTGCTCACTGCA...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS TCA 90 bp | ATTCATGTCTTGAGTCTCAAAGAGGCCACAGCAGGTGTGGAATGGTaGCCTGCATATTCTCCCTGGTGCCCATATTGCCATAAAAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHVLSLKEATAGVEW*PAYSPWCPYCHKNS Trigger: GCTATTTTTATGGCAATATGGGCACCAGGGAGAATATGCAGGTCACCATTCCACACCTGCTGTGGCCTCTTTGAGACTCAAGACATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140777.2 |
||
| CDS CCA 90 bp | CAGATACCTATGTCAGTGGCTCGGGCTGGCAGAGGCCTCCTCCACTaGGTCACAAATTTATATGCATCCAATCTGATTTCTATGATATTG | + |
|
Preference number: 5 (lower is better) Translates to: QIPMSVARAGRGLLH*VTNLYASNLISMIL Trigger: CAATATCATAGAAATCAGATTGGATGCATATAAATTTGTGACCCAGTGGAGGAGGCCTCTGCCAGCCCGAGCCACTGACATAGGTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS CCA 90 bp | TCATATGTTGCCCAATTAGTAGCCAAGGATCCTGAGGAATGTTGCTaGTATTCATGTCTTGAGTCTCAAAGAGGCCACAGCAGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SYVAQLVAKDPEECC*YSCLESQRGHSRCG Trigger: TCCACACCTGCTGTGGCCTCTTTGAGACTCAAGACATGAATACCAGCAACATTCCTCAGGATCCTTGGCTACTAATTGGGCAACATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140777.2 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCTTTGTACCCTGCTCTTaGATTTGTTCTTCTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGFVPCS*ICSSGQ Trigger: CTGACCAGAAGAACAAATCAAAGAGCAGGGTACAAA...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCTCTTGTATTCCCCTTTaGATTTTGTGTCGTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGSCIPL*ILCRDH Trigger: GTGGTCACGACACAAAATCAAAAGGGGAATACAAGA...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | CTTTCATATGTTGCCCAATTAGTAGCCAAGGATCCTGAGGAATGTTaGTGGTATTCATGTCTTGAGTCTCAAAGAGGCCACAGCAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSYVAQLVAKDPEEC*WYSCLESQRGHSRC Trigger: ACACCTGCTGTGGCCTCTTTGAGACTCAAGACATGAATACCAGCAACATTCCTCAGGATCCTTGGCTACTAATTGGGCAACATATGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140777.2 |
||
| CDS CCA 90 bp | ATGAAGTTGTTCCATATTTGCTTCAAAAACATGATGACTCCCATCTaGAGGCAGAGGTCTATCAGACAGCCACTAGGATGGCATTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MKLFHICFKNMMTPI*RQRSIRQPLGWHSS Trigger: GGAGGAATGCCATCCTAGTGGCTGTCTGATAGACCTCTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCGATGCAGGCTTATCTTaGGTAACAAAGTCATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGDAGLS*VTKSLR Trigger: CCTTAATGACTTTGTTACCAAAGATAAGCCTGCATC...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCACTGCTTCGAGTAGCATaGCTGAAGAAGGTGTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSLLRVA*LKKVSL Trigger: TAAGGACACCTTCTTCAGCAATGCTACTCGAAGCAG...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTCCATCCTGTAATATTTaGCTTCAAACTGGGGGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTQTQRTENYYREDSERLPSCNI*LQTGGE Trigger: TTCGCCCCCAGTTTGAAGCAAAATATTACAGGATGG...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCCGCTCAAAAAGTTTATaGTATTTTCCTGGGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFRSKSL*YFPGWP Trigger: AGGCCACCCAGGAAAATACAATAAACTTTTTGAGCG...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | TATGCCTTTCTCTTGGATCCCATCTGCCTTCCAAGTGTCTCATTCCTGCACACTTCTGCTTCACATGATTaGCACAAGGGCCATATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YAFLLDPICLPSVSFLHTSASHD*HKGHIC Trigger: ACAAATATGGCCCTTGTGCAAATCATGTGAAGCAGA...AGTGTGCAGGAATGAGACACTTGGAAGGCAGATGGGATCCAAGAGAAAGGCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS TCA 90 bp | AGATGTAGCAAACTGCCAGTGCTGTTTGACGAAATTCCACTTGAATaGTGCAAACTGTTCCATGACTACCAGACGGTACACTACAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSKLPVLFDEIPLE*CKLFHDYQTVHYNC Trigger: GCAGTTGTAGTGTACCGTCTGGTAGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GCTGATTTCTACAACATACCCTGCTCCTTCACTCCCGGCCGTTCTTTGTATTTCTTGACGAAATTCCACTaGAATGATGCAAACTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADFYNIPCSFTPGRSLYFLTKFH*NDANCS Trigger: GGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAA...GAAATACAAAGAACGGCCGGGAGTGAAGGAGCAGGGTATGTTGTAGAAATCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CATACACAGACTCAGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTAACTGCCAGTGCTGTTaGACGAAATTCCACTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: HTQTQRTENYYREDSERLNCQCC*TKFHLN Trigger: ATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTT...AAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCTGAGTCTGTGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GTTCTGCAGCTATTGGAACAGAATGGCCTCAAAACACAGAACTCCCCTGAAGGCATGATGATTATGAAATaGATACAGACAGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VLQLLEQNGLKTQNSPEGMMIMK*IQTAAP Trigger: TGGTGCTGCTGTCTGTATCAATTTCATAATCATCAT...GCCTTCAGGGGAGTTCTGTGTTTTGAGGCCATTCTGTTCCAATAGCTGCAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAAGAAATGTTACAGAAGTaGGAGCCTGAGATTCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAIQLQPFGGHKSFISLEEMLQK*EPEIHS Trigger: AGAGTGAATCTCAGGCTCCAACTTCTGTAACATTTC...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTGAGAACTACTACAGAGAAGACTCAGAACGGCTTACACAACTTGTCATTAGACAGCTTTGTCTaGGATGCAGGCTTATCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLRTTTEKTQNGLHNLSLDSFV*DAGLSL Trigger: CAAAGATAAGCCTGCATCCAAGACAAAGCTGTCTAA...TGACAAGTTGTGTAAGCCGTTCTGAGTCTTCTCTGTAGTAGTTCTCAGTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGTCTGGAAACGCTGACTaGTCAAGGACCATTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RLCQESFSIQVESHHAARSGNAD*SRTIGF Trigger: AAACCCAATGGTCCTTGACAAGTCAGCGTTTCCAGA...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CTTGCCATCCAGTTGCAGCCCTTTGGAGGTCACAAGTCTTTTATTTCCTTAGAAATTCCCCTTTTGATTTaGTGTCGTGACCACCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAIQLQPFGGHKSFISLEIPLLI*CRDHQF Trigger: AAACTGGTGGTCACGACACAAAATCAAAAGGGGAAT...TTCTAAGGAAATAAAAGACTTGTGACCTCCAAAGGGCTGCAACTGGATGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS TCA 90 bp | CTCACGGAGGCCCTTTGGTATATCAGGAATCAGGTATGCAATGAATaGCTTAATGCCAAAAACAAGATGCTCAAACACGATAATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTEALWYIRNQVCNE*LNAKNKMLKHDNEG Trigger: GCCTTCATTATCGTGTTTGAGCATCTTGTTTTTGGCATTAAGTCATTCATTGCATACCTGATTCCTGATATACCAAAGGGCCTCCGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | ATGAAATTGATACAGACAGCAGCACCAGATGTAGCAAACTGCCAGTaGTGTTTGACGAAATTCCACTTGAATGATGCAAACTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MKLIQTAAPDVANCQ*CLTKFHLNDANCSM Trigger: CATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTATCAATTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | TTTTGGATTAACGGATATCCCAGCTCCATGAAGTTGTTCCATATTTaGTTCAAAAACATGATGACTCCCATCTGGAGGCAGAGGTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: FWINGYPSSMKLFHI*FKNMMTPIWRQRSI Trigger: GATAGACCTCTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAGCTGGGATATCCGTTAATCCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | CTATTGGCATTTGTTAACAAAAATGGGCAGTGCACTTGGCTCTGGGTGATAAAGCCCAGCTCCATGAAGTaGTTCCATATTTGCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLAFVNKNGQCTWLWVIKPSSMK*FHICFK Trigger: TTTGAAGCAAATATGGAACAACTTCATGGAGCTGGG...CTTTATCACCCAGAGCCAAGTGCACTGCCCATTTTTGTTAACAAATGCCAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | ATAGTAACATTTCTTCCTGAAGGGCACCCTGATGTTCAGCCTCTCTaGATACTTGCACAGTGTGTCCCATGGAATGTGAATTTTAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVTFLPEGHPDVQPL*ILAQCVPWNVNFNK Trigger: TTTATTAAAATTCACATTCCATGGGACACACTGTGCAAGTATGCAGAGAGGCTGAACATCAGGGTGCCCTTCAGGAAGAAATGTTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | AGATGCTATGTAACTCATGTCATTCTTAGACAGCTTTGTCTTGGATaGAGGCTTATCTTTGGTAACAAAGTCATTAAGGAGACGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RCYVTHVILRQLCLG*RLIFGNKVIKETRS Trigger: CGATCTCGTCTCCTTAATGACTTTGTTACCAAAGATAAGCCTGCATCCAAGACAAAGCTGTCTAAGAATGACATGAGTTACATAGCATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 90 bp | ATGATTATGAAATTGATACAGACAGCAGCACCAGATGTAGCAAACTaGCAGTGCTGTTTGACGAAATTCCACTTGAATGATGCAAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: MIMKLIQTAAPDVAN*QCCLTKFHLNDANC Trigger: ACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTATCAATTTCATAATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | AGATTGTGCCAAGAATCATTTAGCATTCAAGTTGAATCTCATCATGCAGCCAGGCGCTTTTTGCCATCTTaGAATAAGAGTCCACTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLCQESFSIQVESHHAARRFLPS*NKSPLD Trigger: ATCTAGTGGACTCTTATTCAAAGATGGCAAAAAGCG...CCTGGCTGCATGATGAGATTCAACTTGAATGCTAAATGATTCTTGGCACAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCATTCGCATCATCCAGAATTCCTGAGAATAGTGTGTGCTATAAATCTTTGGTATGGAAGCGTCTaGTATTCCCCTTTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: EQHSHHPEFLRIVCAINLWYGSV*YSPFDF Trigger: AAAATCAAAAGGGGAATACAAGACGCTTCCATACCA...AAGATTTATAGCACACACTATTCTCAGGAATTCTGGATGATGCGAATGCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS TCA 90 bp | TTCCCATACCAAGTTCACTCAGGTCAAAGAAGGATAAGCTATTGTTaGCATAGCCCTTTAGGCAATTTTCATTCTGCTTCACATGATTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPYQVHSGQRRISYC*HSPLGNFHSASHDL Trigger: CAAATCATGTGAAGCAGAATGAAAATTGCCTAAAGGGCTATGTCAACAATAGCTTATCCTTCTTTGACCTGAGTGAACTTGGTATGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS-3UTR CAA 90 bp | AAATGGCATGTGCATACATTCATATCAATGAGACAAAGACAATTCCACAAACCTGATTTCTTGGCTTACTaGGCTTTCGTTCATTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KWHVHTFISMRQRQFHKPDFLAY*AFVHCD Trigger: GTCACAATGAACGAAAGCCAAGTAAGCCAAGAAATC...AGGTTTGTGGAATTGTCTTTGTCTCATTGATATGAATGTATGCACATGCCATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
||
| CDS GCA 72 bp | GTCCAGAGGCTGATGCTTGTACCACATTCCCCAGCGTaGCCAGCGCTCATACAACAGATGCCTGTTATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VQRLMLVPHSPA*PALIQQMPVIL Trigger: CAGAATAACAGGCATCTGTTGTATGAGCGCTGGGCACGCTGGGGAATGTGGTACAAGCATCAGCCTCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099623.10 ENSMUST00000140777.2 |
||
| CDS TCA 72 bp | TTCTCACCAAAGTACATCCTGATTAAGTCCAGAGGCTaGTGCTTGTACCACATTCCCCAGCGTGCCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FSPKYILIKSRG*CLYHIPQRAQR Trigger: GCGCTGGGCACGCTGGGGAATGTGGTACAAGCATCAGCCTCTGGACTTAATCAGGATGTACTTTGGTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099623.10 ENSMUST00000140777.2 |
||
| CDS TCA 72 bp | CCAATCGAGCAGCCAGGATGTGCCAGTACTGTAAGGTaGATTCATAGGGTTTGGAACTCCAAGGTGGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PIEQPGCASTVR*IHRVWNSKVGL Trigger: GAGGCCCACCTTGGAGTTCCAAACCCTATGAATTCACCTTACAGTACTGGCACATCCTGGCTGCTCGATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | AGTATAGCAGTCCGACTCCTCCAGCTCTGGAAACGCTaGCTTGTCAAGGACCATTGGGTTTTGGGACATCCA | + |
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Preference number: 6 (lower is better) Translates to: SIAVRLLQLWKR*LVKDHWVLGHP Trigger: TGGATGTCCCAAAACCCAATGGTCCTTGACAAGTCAGCGTTTCCAGAGCTGGAGGAGTCGGACTGCTATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | CGTGCCCAGCGCTCATACAACAGATGCCTGTTATTCTaGGGTCCATGGGTTTTGATCGGAAGGCTACTCTTG | + |
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Preference number: 6 (lower is better) Translates to: RAQRSYNRCLLF*GPWVLIGRLLL Trigger: CAAGAGTAGCCTTCCGATCAAAACCCATGGACCTCAGAATAACAGGCATCTGTTGTATGAGCGCTGGGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099623.10 ENSMUST00000140777.2 |
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| CDS TCA 72 bp | TTGAGTCTCAAAGAGGCCACAGCAGGTGTGGAATGGTaGCCTGCATATTCTCCCTGGTGCCCATATTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LSLKEATAGVEW*PAYSPWCPYCH Trigger: ATGGCAATATGGGCACCAGGGAGAATATGCAGGTCACCATTCCACACCTGCTGTGGCCTCTTTGAGACTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140777.2 |
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| CDS CCA 72 bp | ATGTCAGTGGCTCGGGCTGGCAGAGGCCTCCTCCACTaGGTCACAAATTTATATGCATCCAATCTGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: MSVARAGRGLLH*VTNLYASNLIS Trigger: AGAAATCAGATTGGATGCATATAAATTTGTGACCCAGTGGAGGAGGCCTCTGCCAGCCCGAGCCACTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | TGGAACTCCAAGGTGGGCCTCTATAGTCTCGGTACCTaGAGTAACCAGATTTTCCCATACCAAGTTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: WNSKVGLYSLGT*SNQIFPYQVHS Trigger: TGAGTGAACTTGGTATGGGAAAATCTGGTTACTGCAGGTACCGAGACTATAGAGGCCCACCTTGGAGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CCA 72 bp | GCCCAATTAGTAGCCAAGGATCCTGAGGAATGTTGCTaGTATTCATGTCTTGAGTCTCAAAGAGGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: AQLVAKDPEECC*YSCLESQRGHS Trigger: GCTGTGGCCTCTTTGAGACTCAAGACATGAATACCAGCAACATTCCTCAGGATCCTTGGCTACTAATTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140777.2 |
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| CDS TCA 72 bp | TGCTGTGATGACCAAGGAGATCATGAAGAAGATTCCTaGGACAGACACAAGAAGTCGCGTGACTTTGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CCDDQGDHEEDS*DRHKKSRDFVG Trigger: TCCGACAAAGTCACGCGACTTCTTGTGTCTGTCTCAGGAATCTTCTTCATGATCTCCTTGGTCATCACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 90 bp | GCACCAGATGTAGCAAACTGCCAGTGCTGTTTGACGAAATTCCACTaGAATGATGCAAACTGTTCCATGACTACCAGACGGTACACTACA | + |
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Preference number: 6 (lower is better) Translates to: APDVANCQCCLTKFH*NDANCSMTTRRYTT Trigger: TGTAGTGTACCGTCTGGTAGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | GTAGGCTCCCTCATGTGGGGGAAATGCTGCTATGTATaGACCATTAGTGATAAGCTTACGGATACCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: VGSLMWGKCCYV*TISDKLTDTHF Trigger: AAAGTGGGTATCCGTAAGCTTATCACTAATGGTTCATACATAGCAGCATTTCCCCCACATGAGGGAGCCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | AAACTGTTCCATGACTACCAGACGGTACACTACAACTaGGAACACTGCTGTGATGACCAAGGAGATCATGAA | + |
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Preference number: 6 (lower is better) Translates to: KLFHDYQTVHYN*EHCCDDQGDHE Trigger: TTCATGATCTCCTTGGTCATCACAGCAGTGTTCGCAGTTGTAGTGTACCGTCTGGTAGTCATGGAACAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CCA 72 bp | TTCCATATTTGCTTCAAAAACATGATGACTCCCATCTaGAGGCAGAGGTCTATCAGACAGCCACTAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: FHICFKNMMTPI*RQRSIRQPLGW Trigger: CCATCCTAGTGGCTGTCTGATAGACCTCTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 72 bp | GTAGCAAACTGCCAGTGCTGTTTGACGAAATTCCACTaGAATGATGCAAACTGTTCCATGACTACCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: VANCQCCLTKFH*NDANCSMTTRR Trigger: CCGTCTGGTAGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 72 bp | TGGCATTCCTCCAGTCTCCACCGCTCAAAAAGTTTATaGTATTTTCCTGGGTGGCCTACGAATCTTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: WHSSSLHRSKSL*YFPGWPTNLPK Trigger: TTTGGGAAGATTCGTAGGCCACCCAGGAAAATACAATAAACTTTTTGAGCGGTGGAGACTGGAGGAATGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 90 bp | TTGATACAGACAGCAGCACCAGATGTAGCAAACTGCCAGTGCTGTTaGACGAAATTCCACTTGAATGATGCAAACTGTTCCATGACTACC | + |
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Preference number: 6 (lower is better) Translates to: LIQTAAPDVANCQCC*TKFHLNDANCSMTT Trigger: GGTAGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTATCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 90 bp | CGTGACCACCAGTTTTGGATTAACGGATATCCCAGCTCCATGAAGTaGTTCCATATTTGCTTCAAAAACATGATGACTCCCATCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RDHQFWINGYPSSMK*FHICFKNMMTPIWR Trigger: CCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAGCTGGGATATCCGTTAATCCAAAACTGGTGGTCACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | AAACTGCCAGTGCTGTTTGACGAAATTCCACTTGAATaGTGCAAACTGTTCCATGACTACCAGACGGTACAC | + |
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Preference number: 6 (lower is better) Translates to: KLPVLFDEIPLE*CKLFHDYQTVH Trigger: GTGTACCGTCTGGTAGTCATGGAACAGTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | ATACAGACAGCAGCACCAGATGTAGCAAACTGCCAGTaGTGTTTGACGAAATTCCACTTGAATGATGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: IQTAAPDVANCQ*CLTKFHLNDAN Trigger: GTTTGCATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | AACGGATATCCCAGCTCCATGAAGTTGTTCCATATTTaGTTCAAAAACATGATGACTCCCATCTGGAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: NGYPSSMKLFHI*FKNMMTPIWRQ Trigger: CTGCCTCCAGATGGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAGCTGGGATATCCGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | AAATTGATACAGACAGCAGCACCAGATGTAGCAAACTaGCAGTGCTGTTTGACGAAATTCCACTTGAATGAT | + |
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Preference number: 6 (lower is better) Translates to: KLIQTAAPDVAN*QCCLTKFHLND Trigger: ATCATTCAAGTGGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTATCAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | TACAGATTTCTTGGCTTACTTGGCTTTCGTTCATTGTaGCTAATCCATAGAAGAAAACACACAGGCCGACAA | + |
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Preference number: 6 (lower is better) Translates to: YRFLGLLGFRSL*LIHRRKHTGRQ Trigger: TTGTCGGCCTGTGTGTTTTCTTCTATGGATTAGTCACAATGAACGAAAGCCAAGTAAGCCAAGAAATCTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099623.10 ENSMUST00000140777.2 |
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| CDS CAA 72 bp | TTCTTAGACAGCTTTGTCTTGGATGCAGGCTTATCTTaGGTAACAAAGTCATTAAGGAGACGAGATCGATCA | + |
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Preference number: 6 (lower is better) Translates to: FLDSFVLDAGLS*VTKSLRRRDRS Trigger: TGATCGATCTCGTCTCCTTAATGACTTTGTTACCAAAGATAAGCCTGCATCCAAGACAAAGCTGTCTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 72 bp | CAGTTTTGGATTAACGGATATCCCAGCTCCATGAAGTaGTTCCATATTTGCTTCAAAAACATGATGACTCCC | + |
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Preference number: 6 (lower is better) Translates to: QFWINGYPSSMK*FHICFKNMMTP Trigger: GGGAGTCATCATGTTTTTGAAGCAAATATGGAACAACTTCATGGAGCTGGGATATCCGTTAATCCAAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS TCA 72 bp | CAAGTTCACTCAGGTCAAAGAAGGATAAGCTATTGTTaGCATAGCCCTTTAGGCAATTTTCATTCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QVHSGQRRISYC*HSPLGNFHSAS Trigger: TGAAGCAGAATGAAAATTGCCTAAAGGGCTATGTCAACAATAGCTTATCCTTCTTTGACCTGAGTGAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS GCA 72 bp | GTAACTCATGTCATTCTTAGACAGCTTTGTCTTGGATaGAGGCTTATCTTTGGTAACAAAGTCATTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: VTHVILRQLCLG*RLIFGNKVIKE Trigger: CTCCTTAATGACTTTGTTACCAAAGATAAGCCTGCATCCAAGACAAAGCTGTCTAAGAATGACATGAGTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CCA 72 bp | TACGGATACCCACTTTTGATATTCCATTTTCATATTTaGTGCGTTCCAGCATGTGATAAACTATCCTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: YGYPLLIFHFHI*CVPACDKLSCF Trigger: GAAGCAGGATAGTTTATCACATGCTGGAACGCACCAAATATGAAAATGGAATATCAAAAGTGGGTATCCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CAA 72 bp | AGCCCTTTAGGCAATTTTCATTCTGCTTCACATGATTaGCACAAGGGCCATATTTGTATTCATAGACAAAAC | + |
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Preference number: 6 (lower is better) Translates to: SPLGNFHSASHD*HKGHICIHRQN Trigger: GTTTTGTCTATGAATACAAATATGGCCCTTGTGCAAATCATGTGAAGCAGAATGAAAATTGCCTAAAGGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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| CDS CCA 72 bp | TGCACAAGGGCCATATTTGTATTCATAGACAAAACGTaGGATGTAATCAGATGTAATAGCAATTACAAATGC | + |
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Preference number: 6 (lower is better) Translates to: CTRAIFVFIDKT*DVIRCNSNYKC Trigger: GCATTTGTAATTGCTATTACATCTGATTACATCCCACGTTTTGTCTATGAATACAAATATGGCCCTTGTGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099623.10 |
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