RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANO10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037949

Ensembl transcript IDs: ENSMUST00000042546.4, ENSMUST00000214283.2, ENSMUST00000214409.2, ENSMUST00000214507.2, ENSMUST00000216081.2, ENSMUST00000216670.2, ENSMUST00000216738.2

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTCCCTGTGCAGGTGTaGTGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCAGCATGG +
Preference number: 1 (lower is better)
Translates to: ASGLSSGCCPLPVQV*CRCPSAQGTGRPAW
Trigger: CCATGCTGGCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGGGGACAGCAGCCTGAACTTAGCCCTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR GCA 90 bp CAGCTGAGGCTCCTGAGCAAAGTGATGAAACAGCTGGAGGGTGTGTaGGGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGT +
Preference number: 1 (lower is better)
Translates to: QLRLLSKVMKQLEGV*GPGRVRVRGTRERG
Trigger: ACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTCAGGAGCCTCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
3UTR TCA 90 bp CGGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTaGGAGAGAGCCTCAGCCACTTTTCCCACAGAGCTAGACCTTGGT +
Preference number: 1 (lower is better)
Translates to: RPWEGPSERHQGKRY*ERASATFPTELDLG
Trigger: ACCAAGGTCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR TCA 90 bp GGACTCCATGAAACCCTGGCCGGGGCTCCTCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGATAGGTCATGTTGGCACAGCCACGCT +
Preference number: 1 (lower is better)
Translates to: GLHETLAGAPQTASS*PESPSDRSCWHSHA
Trigger: AGCGTGGCTGTGCCAACATGACCTATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 90 bp AGGGGCTCCTCCCGGCCCGTGACTGAATTGATGCCAAGGACTCCATaGAACCCTGGCCGGGGCTCCTCAAACTGCCTCTTCATGACCAGA +
Preference number: 1 (lower is better)
Translates to: RGSSRPVTELMPRTP*NPGRGSSNCLFMTR
Trigger: TCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTCCTTGGCATCAATTCAGTCACGGGCCGGGAGGAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 90 bp TTGTCTCTTGTAGCTCGAGTAGAGGGGCTCCTCCCGGCCCGTGACTaGATTGATGCCAAGGACTCCATGAAACCCTGGCCGGGGCTCCTC +
Preference number: 1 (lower is better)
Translates to: LSLVARVEGLLPARD*IDAKDSMKPWPGLL
Trigger: GAGGAGCCCCGGCCAGGGTTTCATGGAGTCCTTGGCATCAATTCAGTCACGGGCCGGGAGGAGCCCCTCTACTCGAGCTACAAGAGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CCA 90 bp TCCTCCAGCTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTTaGGTCACGATGCCAGACGTGAGCAGTCTCCTCACGGGGCAGGAA +
Preference number: 1 (lower is better)
Translates to: SSSFFRASVSCSGNT*VTMPDVSSLLTGQE
Trigger: TTCCTGCCCCGTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTaGCTCAGCATGGTTCCCACCATGGGTATAATGGGCACAGACACT +
Preference number: 1 (lower is better)
Translates to: KQGGDSGVPLLPDHR*LSMVPTMGIMGTDT
Trigger: AGTGTCTGTGCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
3UTR GCA 90 bp CGAGTGTACCACGTGTCCTCCAGCTTCTTCAGGGCTTCAGTGTCATaGAGCGGGAACACTTGGGTCACGATGCCAGACGTGAGCAGTCTC +
Preference number: 1 (lower is better)
Translates to: RVYHVSSSFFRASVS*SGNTWVTMPDVSSL
Trigger: GAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGACACGTGGTACACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CCA 90 bp AAGGAATGGGCATCAGTACCTGCGTCCTTGGCTCACACAGCCCAGTaGTCCAGTCAGGCAGGAAGTAGTGGCTGTTGCTTGAGTGCCTCC +
Preference number: 1 (lower is better)
Translates to: KEWASVPASLAHTAQ*SSQAGSSGCCLSAS
Trigger: GGAGGCACTCAAGCAACAGCCACTACTTCCTGCCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGCCCATTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 90 bp CTTCAGTGTCATGCAGCGGGAACACTTGGGTCACGATGCCAGACGTaGGCAGTCTCCTCACGGGGCAGGAACTTGCTGAGCAATCCAGAT +
Preference number: 1 (lower is better)
Translates to: LQCHAAGTLGSRCQT*AVSSRGRNLLSNPD
Trigger: ATCTGGATTGCTCAGCAAGTTCCTGCCCCGTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp GAGAGCCTCAGCCACTTTTCCCACAGAGCTAGACCTTGGTGTGCCTaGTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGCTAAGT +
Preference number: 1 (lower is better)
Translates to: ESLSHFSHRARPWCA*CILATSHSPASGLS
Trigger: ACTTAGCCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR GCA 90 bp AGCCTCAGCCACTTTTCCCACAGAGCTAGACCTTGGTGTGCCTGCTaGATATTAGCCACTTCACACAGCCCAGCATCAGGGCTAAGTTCA +
Preference number: 1 (lower is better)
Translates to: SLSHFSHRARPWCAC*ILATSHSPASGLSS
Trigger: TGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCTAGCTCTGTGGGAAAAGTGGCTGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR CCA 90 bp CAATCACAACGGCATAAACAATGCTGGGTACATACAGCAGAAGGCTaGTCCACTCAGACCCACTGTCCTCGTGGAGACTCAAGGCCCAGT +
Preference number: 1 (lower is better)
Translates to: QSQRHKQCWVHTAEG*STQTHCPRGDSRPS
Trigger: ACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTCTGAGTGGACCAGCCTTCTGCTGTATGTACCCAGCATTGTTTATGCCGTTGTGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp CTCAAGGAAACATACTTCTCTTCTAAAGGAATGGGCATCAGTACCTaGGTCCTTGGCTCACACAGCCCAGTGGTCCAGTCAGGCAGGAAG +
Preference number: 1 (lower is better)
Translates to: LKETYFSSKGMGIST*VLGSHSPVVQSGRK
Trigger: CTTCCTGCCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGCCCATTCCTTTAGAAGAGAAGTATGTTTCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp TGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAATCCTaGTCACTGGCCTCTCCTCCCCAGTGCTTCTATATAAGGCATGGT +
Preference number: 1 (lower is better)
Translates to: CPQVSSLSVRDYLES*SLASPPQCFYIRHG
Trigger: ACCATGCCTTATATAGAAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CCA 90 bp ATCCTGCTCACTGGCCTCTCCTCCCCAGTGCTTCTATATAAGGCATaGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGAAAC +
Preference number: 1 (lower is better)
Translates to: ILLTGLSSPVLLYKA*LEHGGGGSAVILRN
Trigger: GTTTCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAGGCCAGTGAGCAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR TCA 90 bp TCTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCA +
Preference number: 1 (lower is better)
Translates to: SVGCAVVYQGWQMRV*TSEPRVHALRPPQS
Trigger: TGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 90 bp AGTAAGGAAGAAGAGATTCTACGACTTGGTTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGCTCTGGCGCAAAAGCTTCATGTCCT +
Preference number: 1 (lower is better)
Translates to: SKEEEILRLGSESGR*SGVWPSSGAKASCP
Trigger: AGGACATGAAGCTTTTGCGCCAGAGCTTGGCCACACTCCTGATCACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTTCTTCCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp CAGTTAGTGACCACGGATATAACGCTCATCGTTTCAAAAGCCAACTaGCATACGCCAATACTGGCCGAAGGTTCTGCAAATGGCCGTTTG +
Preference number: 1 (lower is better)
Translates to: QLVTTDITLIVSKAN*HTPILAEGSANGRL
Trigger: CAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCAGTTGGCTTTTGAAACGATGAGCGTTATATCCGTGGTCACTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 90 bp TATAGTCCAGCAGTGTCTCCAGGCACACTGCTCTTACCTGTTGCTTaGGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTT +
Preference number: 1 (lower is better)
Translates to: YSPAVSPGTLLLPVA*VPPKIRIPIWPVSV
Trigger: AACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACTGCTGGACTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR GCA 90 bp TCAGGGATGGCAAATGCGAGTATGAACTTCAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATCAGAACAAGGTCTGTTTTGGATTCT +
Preference number: 1 (lower is better)
Translates to: SGMANASMNFRAKSA*STATTIRTRSVLDS
Trigger: AGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 90 bp CCCAAGATGTTAGGAACTCGGCAGCATATCGATAGAGGCGGTTCATaGTCTCAATCACAACGGCATAAACAATGCTGGGTACATACAGCA +
Preference number: 1 (lower is better)
Translates to: PKMLGTRQHIDRGGS*SQSQRHKQCWVHTA
Trigger: TGCTGTATGTACCCAGCATTGTTTATGCCGTTGTGATTGAGATCATGAACCGCCTCTATCGATATGCTGCCGAGTTCCTAACATCTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 90 bp TTTATCAGGGATGGCAAATGCGAGTATGAACTTCAGAGCCAAGAGTaGATGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTTGGA +
Preference number: 1 (lower is better)
Translates to: FIRDGKCEYELQSQE*MLYGHHNQNKVCFG
Trigger: TCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 90 bp GCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTaGCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAACTTCAGA +
Preference number: 1 (lower is better)
Translates to: ASKDSNSNLASFCWM*RGLSGMANASMNFR
Trigger: TCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CCA 90 bp TTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTaGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAAC +
Preference number: 1 (lower is better)
Translates to: LSASKDSNSNLASFC*MCRGLSGMANASMN
Trigger: GTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 90 bp TCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTaGCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAATCC +
Preference number: 1 (lower is better)
Translates to: SGRTRKQSSQHSLRL*PQVSSLSVRDYLES
Trigger: GGATTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CCA 90 bp CAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCCGTaGTTTATCAGGGATGGCAAATGCGAGTATGAACTTCAGAGCCAA +
Preference number: 1 (lower is better)
Translates to: QRFEFQSGQFLLDVP*FIRDGKCEYELQSQ
Trigger: TTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 90 bp AACAAGGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACAGTTAGTGACCACGGATATAACGCT +
Preference number: 1 (lower is better)
Translates to: NKVCFGFWKDCIHLW*HSNQSTVSDHGYNA
Trigger: AGCGTTATATCCGTGGTCACTAACTGTGCTCTGATTGGAATGTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR GCA 90 bp GGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGGGGCTAAGTTCAGGCTaGTGTCCCCTCCCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: GRVRVRGTRERGTEREPQGLSSG*CPLPVQ
Trigger: CTGCACAGGGAGGGGACAGCAGCCTGAACTTAGCCC...CTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR CAA 90 bp GTCCTCCAGCTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTaGGGTCACGATGCCAGACGTGAGCAGTCTCCTCACGGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLQLLQGFSVMQREH*GHDARREQSPHGAG
Trigger: TCCTGCCCCGTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR GCA 90 bp TCTTGGAGAAGCAGGAGTCGGAGCCAAGGGCTGCCTTTAATAGCTCAGTTGCAAGAGGAGATTCAGGTGTaGCCCTACTCCCCGACCACC +
Preference number: 2 (lower is better)
Translates to: SWRSRSRSQGLPLIAQLQEEIQV*PYSPTT
Trigger: GGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTC...TTGCAACTGAGCTATTAAAGGCAGCCCTTGGCTCCGACTCCTGCTTCTCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
3UTR-3UTR GCA 90 bp CACTCAGACCCACTGTCCTCGTGGAGACTCAAGGCCCAGTCCTCCATGTCAAAGAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATC +
Preference number: 2 (lower is better)
Translates to: HSDPLSSWRLKAQSSMSKRAKSA*STATTI
Trigger: GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCT...CTTTGACATGGAGGACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTCTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp AGAGCACAGTTAGTGACCACGGATATAACGCTCATCGTTTCAAAAGCCAACTGCTCACGATGCCAGACGTaGGCAGTCTCCTCACGGGGC +
Preference number: 2 (lower is better)
Translates to: RAQLVTTDITLIVSKANCSRCQT*AVSSRG
Trigger: GCCCCGTGAGGAGACTGCTCACGTCTGGCATCGTGA...GCAGTTGGCTTTTGAAACGATGAGCGTTATATCCGTGGTCACTAACTGTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp GGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGC +
Preference number: 2 (lower is better)
Translates to: GRRFCKWPFEDPAHFQGISESGR*SGVWPS
Trigger: GCTTGGCCACACTCCTGATCACCTCCCAGATTCTGA...GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CAA 90 bp AAACATACTTCTCTTCTAAAGGAATGGGCATCAGTACCTGCGTCCTaGGCTCACACAGCCCAGTGGTCCAGTCAGGCAGGAAGTAGTGGC +
Preference number: 2 (lower is better)
Translates to: KHTSLLKEWASVPAS*AHTAQWSSQAGSSG
Trigger: GCCACTACTTCCTGCCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGCCCATTCCTTTAGAAGAGAAGTATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CAA 90 bp ACAGTACTTCCGCTGCAGCCAGTAAGGAAGAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGTGATCAGGAGTGTGGCCAAGCTCTG +
Preference number: 2 (lower is better)
Translates to: TVLPLQPVRKKRFYD*VQNLGGDQECGQAL
Trigger: CAGAGCTTGGCCACACTCCTGATCACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTTCTTCCTTACTGGCTGCAGCGGAAGTACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp ACGTTCCCATTTCCTTCTCCAGGAGGACTTGCTCATACAAGGTTGTGTCGACCTCTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACC +
Preference number: 2 (lower is better)
Translates to: TFPFPSPGGLAHTRLCRPLWAGT*EQTECT
Trigger: GGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAG...AGGTCGACACAACCTTGTATGAGCAAGTCCTCCTGGAGAAGGAAATGGGAACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp ATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAACTTCAGAGCCAAGCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGAT +
Preference number: 2 (lower is better)
Translates to: MCRGLSGMANASMNFRAKQTASS*PESPSD
Trigger: ATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTG...CTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp GGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCCGAAGGTTCTGCAAATaGCCGTTTGAAGACCCTGCA +
Preference number: 2 (lower is better)
Translates to: GRRFCKWPFEDPAHFQGIRRFCK*PFEDPA
Trigger: TGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCG...GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp TTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCTGCAGCGGGAACACTTaGGTCACGATGCCAGACGTG +
Preference number: 2 (lower is better)
Translates to: LSASKDSNSNLASFCWMCCSGNT*VTMPDV
Trigger: CACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCA...GCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp TTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCGACTCCATGAAACCCTaGCCGGGGCTCCTCAAACTG +
Preference number: 2 (lower is better)
Translates to: LSASKDSNSNLASFCWMCDSMKP*PGLLKL
Trigger: CAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTC...GCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CAA 90 bp TTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTaGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTGCTTCTATATA +
Preference number: 2 (lower is better)
Translates to: LRLCPQVSSLSVRDY*ESCSLASPPQCFYI
Trigger: TATATAGAAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 90 bp GGTACGTTCCCATTTCCTTCTCCAGGAGGACTTGCTCATACAAGGTaGTGTCGACCTCAGACTTTAATGCCTGAACCTTCCGCTTTACCC +
Preference number: 2 (lower is better)
Translates to: GTFPFPSPGGLAHTR*CRPQTLMPEPSALP
Trigger: GGGTAAAGCGGAAGGTTCAGGCATTAAAGTCTGAGGTCGACACAACCTTGTATGAGCAAGTCCTCCTGGAGAAGGAAATGGGAACGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp AGTGTCTCCAGGCACACTGCTCTTACCTGTTGCTTGAGTGCCTCCAAAGATTCGGGGGTGGCTCTGCAGTaGTTCTTAGAAACCTGTATT +
Preference number: 2 (lower is better)
Translates to: SVSRHTALTCCLSASKDSGVALQ*FLETCI
Trigger: AATACAGGTTTCTAAGAATCACTGCAGAGCCACCCC...CGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR TCA 90 bp CTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTGCTTGGGGTGGCTCTGCAGTaGTTCTTAGAAACCTGTATT +
Preference number: 2 (lower is better)
Translates to: LCKRLFGILLTGLSSPVLGVALQ*FLETCI
Trigger: AATACAGGTTTCTAAGAATCACTGCAGAGCCACCCC...AAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 90 bp AACTGCCATACGCCAATACTGGCCGAAGGTTCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTCAAGGCATCTGAGTTGACTTCAGTG +
Preference number: 2 (lower is better)
Translates to: NCHTPILAEGSANGR*KTLHIFKASELTSV
Trigger: CACTGAAGTCAACTCAGATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp CTCCAGGCACACTGCTCTTACCTGTTGCTTGAGTGCCTCCAAAGATTCGAATTCCTGCAAATGGCCGTTTaGAGACCCTGCACATTTTCA +
Preference number: 2 (lower is better)
Translates to: LQAHCSYLLLECLQRFEFLQMAV*RPCTFS
Trigger: TGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAG...GAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR TCA 90 bp CTTCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACA +
Preference number: 2 (lower is better)
Translates to: LQSQECMLYGHHNQNKVCCIHLW*HSNQST
Trigger: TGTGCTCTGATTGGAATGTCACCACAAGTGAATGCA...ACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp GTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCCGTGTGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTG +
Preference number: 2 (lower is better)
Translates to: VPPKIRIPIWPVSVGCAVWQMRV*TSEPRV
Trigger: CACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCA...CACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR GCA 90 bp AGAAGAGATTCTACGACTTGGTTCAGAATCTGGGAGGTGATCAGGAGTGTGGCCGAGAGACTAGGTAGATaGGCAGTTGTCTCTTGTAGC +
Preference number: 2 (lower is better)
Translates to: RRDSTTWFRIWEVIRSVAERLGR*AVVSCS
Trigger: GCTACAAGAGACAACTGCGCATCTACCTAGTCTCTC...GGCCACACTCCTGATCACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CAA 90 bp AGGAATATAGTCCAGCAGTGTCTCCAGGCACACTGCTCTTACCTGTaGCTTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTT +
Preference number: 2 (lower is better)
Translates to: RNIVQQCLQAHCSYL*LECLQRFEFQSGQF
Trigger: AAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACTGCTGGACTATATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR GCA 90 bp TTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCACTGGCCGAAGGTTCTaGAAATGGCCGTTTGAAGAC +
Preference number: 2 (lower is better)
Translates to: LSASKDSNSNLASFCWMCTGRRF*KWPFED
Trigger: GTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGT...GCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CAA 90 bp CTTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTaGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAA +
Preference number: 2 (lower is better)
Translates to: LECLQRFEFQSGQFL*DVPWFIRDGKCEYE
Trigger: TTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp CACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGATTACTGATCTGGGTTaGGCTATCCCATCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: HSLRLCPQVSSLSVRDYLITDLG*AIPSPL
Trigger: CAAAGGAGATGGGATAGCCCAACCCAGATCAGTAAT...CAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR-3UTR CCA 90 bp TCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGACTTCTATATAAGGCATaGTTAGAACATGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SSQHSLRLCPQVSSLSVRLLYKA*LEHGGG
Trigger: ACCCCCACCATGTTCTAACCATGCCTTATATAGAAG...TCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 90 bp AAGAGTGCATGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTaGGATTCTGGAAAGACTGCATTCACTTGTGGTGACATTCCAATC +
Preference number: 2 (lower is better)
Translates to: KSACSTATTIRTRSV*DSGKTAFTCGDIPI
Trigger: GATTGGAATGTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CAA 90 bp GCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCTGAGTaGACTTCAGTGAAGTTATTTAACACAGCAAAGGCAGCTGCTAGC +
Preference number: 2 (lower is better)
Translates to: ANGRLKTLHIFKASE*TSVKLFNTAKAAAS
Trigger: GCTAGCAGCTGCCTTTGCTGTGTTAAATAACTTCACTGAAGTCAACTCAGATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp TCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTCATTTTCAAGGCATCTaGGTTGACTTCAGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: SEPRVHALRPPQSEQGLFHFQGI*VDFSEV
Trigger: AACTTCACTGAAGTCAACTCAGATGCCTTGAAAATG...AAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR TCA 90 bp GCCACCACAATCAGAACAAGGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTTGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTG +
Preference number: 2 (lower is better)
Translates to: ATTIRTRSVLDSGKTAFTWQMRV*TSEPRV
Trigger: CACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCA...AGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR GCA 90 bp GGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTTGTGGTGACATTCCAATCAACTGGCCGAAGGTTCTaGAAATGGCCGTTTGAAGAC +
Preference number: 2 (lower is better)
Translates to: GLFWILERLHSLVVTFQSTGRRF*KWPFED
Trigger: GTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGT...TGATTGGAATGTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp TATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGAAACATTACTGATCTGGGTTaGGCTATCCCATCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: YKAWLEHGGGGSAVILRNITDLG*AIPSPL
Trigger: CAAAGGAGATGGGATAGCCCAACCCAGATCAGTAAT...GTTTCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR-3UTR GCA 90 bp GCCACCACAATCAGAACAAGGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTAGTTTCTGTTGGATGTaGCGTGGTTTATCAGGGATG +
Preference number: 2 (lower is better)
Translates to: ATTIRTRSVLDSGKTAFTSFCWM*RGLSGM
Trigger: CATCCCTGATAAACCACGGCACATCCAACAGAAACT...AGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR CCA 90 bp TCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAACTTCTATATAAGGCATaGTTAGAACATGGTGGGGGT +
Preference number: 2 (lower is better)
Translates to: SLRLCPQVSSLSVRDYLELLYKA*LEHGGG
Trigger: ACCCCCACCATGTTCTAACCATGCCTTATATAGAAG...TTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR-3UTR TCA 90 bp GAAACATACTTCTCTTCTAAAGGAATGGGCATCAGTACCTGCGTCCTTGGCTCACATTTTCAAGGCATCTaGGTTGACTTCAGTGAAGTT +
Preference number: 2 (lower is better)
Translates to: ETYFSSKGMGISTCVLGSHFQGI*VDFSEV
Trigger: AACTTCACTGAAGTCAACTCAGATGCCTTGAAAATG...TGAGCCAAGGACGCAGGTACTGATGCCCATTCCTTTAGAAGAGAAGTATGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 72 bp CATGCAGCGGGAACACTTGGGTCACGATGCCAGACGTaGGCAGTCTCCTCACGGGGCAGGAACTTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: HAAGTLGSRCQT*AVSSRGRNLLS
Trigger: GCTCAGCAAGTTCCTGCCCCGTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp GGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTaGCTCAGCATGGTTCCCACCATGGGTATAATGGGC +
Preference number: 3 (lower is better)
Translates to: GDSGVPLLPDHR*LSMVPTMGIMG
Trigger: GCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
3UTR TCA 72 bp GAAACCCTGGCCGGGGCTCCTCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGATAGGTCATGTTGGCAC +
Preference number: 3 (lower is better)
Translates to: ETLAGAPQTASS*PESPSDRSCWH
Trigger: GTGCCAACATGACCTATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCGGCCAGGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 72 bp TCCCGGCCCGTGACTGAATTGATGCCAAGGACTCCATaGAACCCTGGCCGGGGCTCCTCAAACTGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: SRPVTELMPRTP*NPGRGSSNCLF
Trigger: GAAGAGGCAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTCCTTGGCATCAATTCAGTCACGGGCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp CACGTGTCCTCCAGCTTCTTCAGGGCTTCAGTGTCATaGAGCGGGAACACTTGGGTCACGATGCCAGACGTG +
Preference number: 3 (lower is better)
Translates to: HVSSSFFRASVS*SGNTWVTMPDV
Trigger: CACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGACACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CCA 72 bp GCATCAGTACCTGCGTCCTTGGCTCACACAGCCCAGTaGTCCAGTCAGGCAGGAAGTAGTGGCTGTTGCTTG +
Preference number: 3 (lower is better)
Translates to: ASVPASLAHTAQ*SSQAGSSGCCL
Trigger: CAAGCAACAGCCACTACTTCCTGCCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CCA 72 bp TTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTTaGGTCACGATGCCAGACGTGAGCAGTCTCCTCACG +
Preference number: 3 (lower is better)
Translates to: FFRASVSCSGNT*VTMPDVSSLLT
Trigger: CGTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CAA 90 bp GAGAGACTAGGTAGATGCGCAGTTGTCTCTTGTAGCTCGAGTAGAGGGGCTCCTATGCAGCGGGAACACTaGGGTCACGATGCCAGACGT +
Preference number: 3 (lower is better)
Translates to: ERLGRCAVVSCSSSRGAPMQREH*GHDARR
Trigger: ACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCAT...AGGAGCCCCTCTACTCGAGCTACAAGAGACAACTGCGCATCTACCTAGTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CAA 90 bp AATGGGCATCAGTACCTGCGTCCTTGGCTCACACAGCCCAGTGGTCCAGTCAGGGTGGACCATATGAGGTaGAACGAGGCAAAGATGACA +
Preference number: 3 (lower is better)
Translates to: NGHQYLRPWLTQPSGPVRVDHMR*NEAKMT
Trigger: TGTCATCTTTGCCTCGTTCAACCTCATATGGTCCAC...CCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp CACTTTTCCCACAGAGCTAGACCTTGGTGTGCCTGCTaGATATTAGCCACTTCACACAGCCCAGCATCAGGG +
Preference number: 3 (lower is better)
Translates to: HFSHRARPWCAC*ILATSHSPASG
Trigger: CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCTAGCTCTGTGGGAAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR GCA 72 bp GGCAGAGGCACACAAATGGCAGAGAGACTAGGTAGATaGGCAGTTGTCTCTTGTAGCTCGAGTAGAGGGGCT +
Preference number: 3 (lower is better)
Translates to: GRGTQMAERLGR*AVVSCSSSRGA
Trigger: AGCCCCTCTACTCGAGCTACAAGAGACAACTGCGCATCTACCTAGTCTCTCTGCCATTTGTGTGCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CAA 90 bp ATCAGTACCTGCGTCCTTGGCTCACACAGCCCAGTGGTCCAGTCAGGCAGGAAGAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGT +
Preference number: 3 (lower is better)
Translates to: ISTCVLGSHSPVVQSGRKKRFYD*VQNLGG
Trigger: ACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTT...CTTCCTGCCTGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp AGCCACTTTTCCCACAGAGCTAGACCTTGGTGTGCCTaGTGCATATTAGCCACTTCACACAGCCCAGCATCA +
Preference number: 3 (lower is better)
Translates to: SHFSHRARPWCA*CILATSHSPAS
Trigger: TGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCTAGCTCTGTGGGAAAAGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR CCA 72 bp ACTGGCCTCTCCTCCCCAGTGCTTCTATATAAGGCATaGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATT +
Preference number: 3 (lower is better)
Translates to: TGLSSPVLLYKA*LEHGGGGSAVI
Trigger: AATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAGGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR-3UTR CAA 90 bp GGGATGGCAAATGCGAGTATGAACTTCAGAGCCAAGAGTGCATGCTCTACGGCCCGAAGTACAGAGCAATaGTCTCCCCAAAGTAGCTAC +
Preference number: 3 (lower is better)
Translates to: GMANASMNFRAKSACSTARSTEQ*SPQSSY
Trigger: GTAGCTACTTTGGGGAGACAATTGCTCTGTACTTCG...GGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 72 bp TGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTGCATGCTCTACGGCCA +
Preference number: 3 (lower is better)
Translates to: CAVVYQGWQMRV*TSEPRVHALRP
Trigger: TGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 72 bp GCAGTGTCTCCAGGCACACTGCTCTTACCTGTTGCTTaGGTGCCTCCAAAGATTCGAATTCCAATCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AVSPGTLLLPVA*VPPKIRIPIWP
Trigger: TGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR TCA 72 bp CAAAGTAGCTACGAATGCTGTCTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACCACGTGTCCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: QSSYECCLWAGT*EQTECTTCPPA
Trigger: AGCTGGAGGACACGTGGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGACAGCATTCGTAGCTACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 72 bp GAAGAGATTCTACGACTTGGTTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGCTCTGGCGCAAAAGCT +
Preference number: 3 (lower is better)
Translates to: EEILRLGSESGR*SGVWPSSGAKA
Trigger: AGCTTTTGCGCCAGAGCTTGGCCACACTCCTGATCACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp ACATACTTCTCTTCTAAAGGAATGGGCATCAGTACCTaGGTCCTTGGCTCACACAGCCCAGTGGTCCAGTCA +
Preference number: 3 (lower is better)
Translates to: TYFSSKGMGIST*VLGSHSPVVQS
Trigger: TGACTGGACCACTGGGCTGTGTGAGCCAAGGACGCAGGTACTGATGCCCATTCCTTTAGAAGAGAAGTATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR CCA 72 bp CTGCCATACGCCAATACTGGCCGAAGGTTCTGCAAATaGCCGTTTGAAGACCCTGCACATTTTCAAGGCATC +
Preference number: 3 (lower is better)
Translates to: LPYANTGRRFCK*PFEDPAHFQGI
Trigger: GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR-3UTR CAA 90 bp TCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTTCTATGGGCTGGTACTaGAGAGCAAACCGAGTGTAC +
Preference number: 3 (lower is better)
Translates to: SEPRVHALRPPQSEQGLFSMGWY*RANRVY
Trigger: GTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGA...AAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp AGCCAACTGCCATACGCCAATACTGGCCGAAGGTTCTaGAAATGGCCGTTTGAAGACCCTGCACATTTTCAA +
Preference number: 3 (lower is better)
Translates to: SQLPYANTGRRF*KWPFEDPAHFQ
Trigger: TTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCAGTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 72 bp GATGGCAAATGCGAGTATGAACTTCAGAGCCAAGAGTaGATGCTCTACGGCCACCACAATCAGAACAAGGTC +
Preference number: 3 (lower is better)
Translates to: DGKCEYELQSQE*MLYGHHNQNKV
Trigger: GACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 72 bp CTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATaGGAGTATGAACTTCAGAGCCAAGAGTGCATGCTC +
Preference number: 3 (lower is better)
Translates to: LLDVPWFIRDGK*EYELQSQECML
Trigger: GAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 72 bp TCCAGCAGTGTCTCCAGGCACACTGCTCTTACCTGTTaGTTGAGTGCCTCCAAAGATTCGAATTCCAATCTG +
Preference number: 3 (lower is better)
Translates to: SSSVSRHTALTC*LSASKDSNSNL
Trigger: CAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACTGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR CAA 90 bp ATCTGGCCAGTTTCTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGATCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTC +
Preference number: 3 (lower is better)
Translates to: IWPVSVGCAVVYQGWQMRSANGR*KTLHIF
Trigger: GAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGA...TCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 72 bp ACTGGCACCTACTGTGAATGTCATGTGGAAAGCTGGTaGCTCTTTAGGGATAACGTTCAAAGGCAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: TGTYCECHVESW*LFRDNVQRQLR
Trigger: CCTCAGCTGCCTTTGAACGTTATCCCTAAAGAGTCACCAGCTTTCCACATGACATTCACAGTAGGTGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
3UTR GCA 72 bp GTCTCCAGTCTCTCTGTAAGAGACTATTTGGAATCCTaGTCACTGGCCTCTCCTCCCCAGTGCTTCTATATA +
Preference number: 3 (lower is better)
Translates to: VSSLSVRDYLES*SLASPPQCFYI
Trigger: TATATAGAAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACTGGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR GCA 72 bp GCAAATGCGAGTATGAACTTCAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATCAGAACAAGGTCTGTT +
Preference number: 3 (lower is better)
Translates to: ANASMNFRAKSA*STATTIRTRSV
Trigger: AACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR GCA 72 bp CCCAGGTACGTTCCCATTTCCTTCTCCAGGAGGACTTaGTCATACAAGGTTGTGTCGACCTCAGACTTTAAT +
Preference number: 3 (lower is better)
Translates to: PRYVPISFSRRT*SYKVVSTSDFN
Trigger: ATTAAAGTCTGAGGTCGACACAACCTTGTATGAGCAAGTCCTCCTGGAGAAGGAAATGGGAACGTACCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR-3UTR CAA 90 bp TTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCTGCTTAGCCTCACCCTaGGTGACATTACTGATCTGG +
Preference number: 3 (lower is better)
Translates to: LSASKDSNSNLASFCWMCCLASP*VTLLIW
Trigger: CCAGATCAGTAATGTCACCAAGGGTGAGGCTAAGCA...GCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR CAA 90 bp CTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTTGCTTAGCCTCACCCTaGGTGACATTACTGATCTGG +
Preference number: 3 (lower is better)
Translates to: LLYKAWLEHGGGGSAVILCLASP*VTLLIW
Trigger: CCAGATCAGTAATGTCACCAAGGGTGAGGCTAAGCA...AAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR TCA 72 bp GGTTGGGCTATCCCATCTCCTTTGTGTTCATTTAACTaGCAAGTCCATGCTAAAGGAGACGCAGTGACTTGG +
Preference number: 3 (lower is better)
Translates to: GWAIPSPLCSFN*QVHAKGDAVTW
Trigger: CCAAGTCACTGCGTCTCCTTTAGCATGGACTTGTCAGTTAAATGAACACAAAGGAGATGGGATAGCCCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR GCA 72 bp ACCACGGATATAACGCTCATCGTTTCAAAAGCCAACTaGCATACGCCAATACTGGCCGAAGGTTCTGCAAAT +
Preference number: 3 (lower is better)
Translates to: TTDITLIVSKAN*HTPILAEGSAN
Trigger: ATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCAGTTGGCTTTTGAAACGATGAGCGTTATATCCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CCA 72 bp TCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTaGATGTGCCGTGGTTTATCAGGGATGGCAAATGCG +
Preference number: 3 (lower is better)
Translates to: SKDSNSNLASFC*MCRGLSGMANA
Trigger: CGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 72 bp TTAGGAACTCGGCAGCATATCGATAGAGGCGGTTCATaGTCTCAATCACAACGGCATAAACAATGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: LGTRQHIDRGGS*SQSQRHKQCWV
Trigger: TACCCAGCATTGTTTATGCCGTTGTGATTGAGATCATGAACCGCCTCTATCGATATGCTGCCGAGTTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR TCA 72 bp CTTCATGTCCTTCAGGACAAAGGCAATGTAGAAGAGTaGGGCGAAGCAATTCAGGAAGTTGAACACCAACAC +
Preference number: 3 (lower is better)
Translates to: LHVLQDKGNVEE*GEAIQEVEHQH
Trigger: GTGTTGGTGTTCAACTTCCTGAATTGCTTCGCCTCACTCTTCTACATTGCCTTTGTCCTGAAGGACATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
3UTR GCA 72 bp ACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTaGCCACAGGTCTCCAGTCTCTCTGTAAGAGACTAT +
Preference number: 3 (lower is better)
Translates to: TRKQSSQHSLRL*PQVSSLSVRDY
Trigger: ATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CCA 72 bp GAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCCGTaGTTTATCAGGGATGGCAAATGCGAGTATGAACTT +
Preference number: 3 (lower is better)
Translates to: EFQSGQFLLDVP*FIRDGKCEYEL
Trigger: AAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CCA 72 bp ACTTGCTTAGCCTCACCCTTGGTGACATTACTGATCTaGGTTGGGCTATCCCATCTCCTTTGTGTTCATTTA +
Preference number: 3 (lower is better)
Translates to: TCLASPLVTLLI*VGLSHLLCVHL
Trigger: TAAATGAACACAAAGGAGATGGGATAGCCCAACCCAGATCAGTAATGTCACCAAGGGTGAGGCTAAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
3UTR-3UTR CAA 90 bp CACCACAATCAGAACAAGGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTTGTCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTC +
Preference number: 3 (lower is better)
Translates to: HHNQNKVCFGFWKDCIHLSANGR*KTLHIF
Trigger: GAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGA...CAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR TCA 72 bp TGTTTTGGATTCTGGAAAGACTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACAGTTAGTGACCACGGA +
Preference number: 3 (lower is better)
Translates to: CFGFWKDCIHLW*HSNQSTVSDHG
Trigger: TCCGTGGTCACTAACTGTGCTCTGATTGGAATGTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp CAGCTGAGGCTCCTGAGCAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGTCACTTGCTGCTCTaGCTTGCCTCCCCACTCCCC +
Preference number: 4 (lower is better)
Translates to: QLRLLSKVMKQLEGVCGPGHLLL*LASPLP
Trigger: GGGGAGTGGGGAGGCAAGTCAGAGCAGCAAGTGACC...AGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTCAGGAGCCTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR TCA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCCTCCCTGTGCAGGTGTaGTGCAGGTGTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSLPVQV*CRCPSA
Trigger: TGCTGAAGGACACCTGCATCACACCTGCACAGGGAG...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR GCA 90 bp GATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCACCGGGGCTCCTCAAACTaGCTCTTCATGACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: DETAGGCVRPWEGPSERHRGSSN*LFMTRV
Trigger: GACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCG...GTGCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp GAGCAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGACCCACTGTCCTCGTaGAGACTCAAGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: EQSDETAGGCVRPWEGPSDPLSS*RLKAQS
Trigger: GGACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTC...ACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCCTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACC +
Preference number: 4 (lower is better)
Translates to: VMKQLEGVCGPGRVRVRGLWAGT*EQTECT
Trigger: GGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAG...GCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp GATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCACGCCACCAGCTTCATTTaGTGTTGCTTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: DETAGGCVRPWEGPSERHATSFI*CCLSAS
Trigger: GGAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGC...GTGCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CCTCCCTGTGCAGGTGTGATGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCGCCACCAGCTTCATTTaGTGTTGCTTGAGTGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPCAGVMQVSFSTGDRTAATSFI*CCLSAS
Trigger: GGAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGC...GGCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTGACTCCATGAAACCCTaGCCGGGGCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: PGRVRVRGTRERGTEREPDSMKP*PGLLKL
Trigger: CAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTC...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp CCTCCCTGTGCAGGTGTGATGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCCATACAGCAGAAGGCTaGTCCACTCAGACCCACTGT +
Preference number: 4 (lower is better)
Translates to: PPCAGVMQVSFSTGDRTAHTAEG*STQTHC
Trigger: ACAGTGGGTCTGAGTGGACCAGCCTTCTGCTGTATG...GGCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp CCCTCCCTGTGCAGGTGTGATGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCATACAGCAGAAGGCTaGTCCACTCAGACCCACTGT +
Preference number: 4 (lower is better)
Translates to: PSLCRCDAGVLQHRGQDGHTAEG*STQTHC
Trigger: ACAGTGGGTCTGAGTGGACCAGCCTTCTGCTGTATG...GCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GAGCAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: EQSDETAGGCVRPWEGPSQTASS*PESPSD
Trigger: ATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTG...ACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp ACTCCCCGACCACCGCTGCCTCAGCATGGTTCCCACCATGGGTATAATGGGCACTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: TPRPPLPQHGSHHGYNGHSESGR*SGVWPS
Trigger: GCTTGGCCACACTCCTGATCACCTCCCAGATTCTGA...GTGCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp AAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGCTGCAAATGGCCGTTTaGAGACCCTGCACATTTTCA +
Preference number: 4 (lower is better)
Translates to: KQLEGVCGPGRVRVRGTRLQMAV*RPCTFS
Trigger: TGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAG...CCTGGTGCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGCGGGGCTCCTCAAACTaGCTCTTCATGACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: QSDETAGGCVRPWEGPSERGSSN*LFMTRV
Trigger: GACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCG...CTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATC +
Preference number: 4 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSRAKSA*STATTI
Trigger: GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCT...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp AGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCAGGACGGCCAGCATGGTaGAGCTCAGGTAGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RVRVRGTRERGTEREPQPGRPAW*SSGSFL
Trigger: AAGGAAGCTACCTGAGCTGCACCATGCTGGCCGTCC...TGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR CCA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCAGCGATAGGTCATGTTaGCACAGCCACGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSSDRSC*HSHAST
Trigger: TGTGGAAGCGTGGCTGTGCCAACATGACCTATCGCT...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp GGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGACTGGCCGAAGGTTCTaGAAATGGCCGTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: GPGRVRVRGTRERGTERETGRRF*KWPFED
Trigger: GTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGT...CTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATC +
Preference number: 4 (lower is better)
Translates to: PGRVRVRGTRERGTEREPRAKSA*STATTI
Trigger: GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCT...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CACTTCACACAGCCCAGCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTCCCTGTCTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACC +
Preference number: 4 (lower is better)
Translates to: HFTQPSIRAKFRLLSPPCLWAGT*EQTECT
Trigger: GGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAG...ACAGGGAGGGGACAGCAGCCTGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGGGATTAAGGCAAAGGTaGAGTACTCCAGGAACCCGA +
Preference number: 4 (lower is better)
Translates to: GRVRVRGTRERGTEREPQGLRQR*STPGTR
Trigger: TCGGGTTCCTGGAGTACTTCACCTTTGCCTTAATCC...CTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR TCA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCGATAGAGGCGGTTCATaGTCTCAATCACAACGGCAT +
Preference number: 4 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSDRGGS*SQSQRH
Trigger: ATGCCGTTGTGATTGAGATCATGAACCGCCTCTATC...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CCTCCCTGTGCAGGTGTGATGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PPCAGVMQVSFSTGDRTACIHLW*HSNQST
Trigger: TGTGCTCTGATTGGAATGTCACCACAAGTGAATGCA...GGCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp AAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAAGCGATAGGTCATGTTaGCACAGCCACGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: KVMKQLEGVCGPGRVRVRSDRSC*HSHAST
Trigger: TGTGGAAGCGTGGCTGTGCCAACATGACCTATCGCT...TCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR CAA 72 bp CTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTaGGGTCACGATGCCAGACGTGAGCAGTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLQGFSVMQREH*GHDARREQSPH
Trigger: GTGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp AAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGAGCAATTCAGGAAGTTaGACACCAACACTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KQLEGVCGPGRVRVRGTRSNSGS*TPTLSE
Trigger: TTCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCT...CCTGGTGCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGTGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: GRVRVRGTRERGTEREPQWQMRV*TSEPRV
Trigger: CACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCA...CTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGCTCCTTCAGGTTTTCTaGCACCAGCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: QSDETAGGCVRPWEGPSELLQVF*HQLHLL
Trigger: CAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAG...CTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
CDS-3UTR GCA 90 bp ACTCCCCGACCACCGCTGCCTCAGCATGGTTCCCACCATGGGTATAATGGGCACCTCCTTCAGGTTTTCTaGCACCAGCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TPRPPLPQHGSHHGYNGHLLQVF*HQLHLL
Trigger: CAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAG...GTGCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
CDS-3UTR GCA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGACTTGCTGCTCTGACTTaGCTCCCCACTCCCCAAGTA +
Preference number: 4 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRLAALT*LPTPQV
Trigger: TACTTGGGGAGTGGGGAGGCAAGTCAGAGCAGCAAG...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR CCA 90 bp AGTGTCTCCAGGCACACTGCTCTTACCTGTTGCTTGAGTGCCTCCAAAGATTCGGACCCACTGTCCTCGTaGAGACTCAAGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVSRHTALTCCLSASKDSDPLSS*RLKAQS
Trigger: GGACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTC...CGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTGTGCCTGGAGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CCA 90 bp ACTCCCCGACCACCGCTGCCTCAGCATGGTTCCCACCATGGGTATAATGGGCACACTTGGTTCAGAATCTaGGAGGTGATCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TPRPPLPQHGSHHGYNGHTWFRI*EVIRSV
Trigger: CACACTCCTGATCACCTCCCAGATTCTGAACCAAGT...GTGCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp GGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGAGAGATTCTACGACTTaGTTCAGAATCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GPGRVRVRGTRERGTERERDSTT*FRIWEV
Trigger: CACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCT...CTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp CACTTCACACAGCCCAGCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTCCCTGTCGAAGGTTCTGCAAATaGCCGTTTGAAGACCCTGCA +
Preference number: 4 (lower is better)
Translates to: HFTQPSIRAKFRLLSPPCRRFCK*PFEDPA
Trigger: TGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCG...ACAGGGAGGGGACAGCAGCCTGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
3UTR CAA 72 bp TGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTaGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: CPQVSSLSVRDY*ESCSLASPPQC
Trigger: GCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp CCCTCCCTGTGCAGGTGTGATGCAGGTGTCCTTCAGCACAGGGGACAGGACGGCCATTTTCAAGGCATCTaGGTTGACTTCAGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: PSLCRCDAGVLQHRGQDGHFQGI*VDFSEV
Trigger: AACTTCACTGAAGTCAACTCAGATGCCTTGAAAATG...GCCGTCCTGTCCCCTGTGCTGAAGGACACCTGCATCACACCTGCACAGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp AAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGACTCCTTCAGGTTTTCTaGCACCAGCTTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: KVMKQLEGVCGPGRVRVRLLQVF*HQLHLL
Trigger: CAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAG...TCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
ENSMUST00000216738.2
CDS-3UTR GCA 90 bp GTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCGGGCTAAGTTCAGGCTaGTGTCCCCTCCCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: VNITPYRSKEEIQVCPYSGLSSG*CPLPVQ
Trigger: CTGCACAGGGAGGGGACAGCAGCCTGAACTTAGCCC...GGAGTAGGGGCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR CCA 90 bp GTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCGACCCACTGTCCTCGTaGAGACTCAAGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: VNITPYRSKEEIQVCPYSDPLSS*RLKAQS
Trigger: GGACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTC...GGAGTAGGGGCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp TGCCATACGCCAATACTGGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACC +
Preference number: 4 (lower is better)
Translates to: CHTPILAEGSANGRLKTLLWAGT*EQTECT
Trigger: GGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAG...CAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGTATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR TCA 90 bp TCTGGCCAGTTTCTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SGQFLLDVPWFIRDGKCESESGR*SGVWPS
Trigger: GCTTGGCCACACTCCTGATCACCTCCCAGATTCTGA...CTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR GCA 90 bp GGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCCGGGGCTCCTCAAACTaGCTCTTCATGACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: GRRFCKWPFEDPAHFQGIRGSSN*LFMTRV
Trigger: GACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCG...GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR GCA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTAGCTTCATTTGCTGTTaGTTGAGTGCCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PGRVRVRGTRERGTEREPSFICC*LSASKD
Trigger: ATCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCT...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp AAGCAGGAGTCGGAGCCAAGGGCTGCCTTTAATAGCTCAGTTGCAAAGTGTCAATGCAGCGGGAACACTTaGGTCACGATGCCAGACGTG +
Preference number: 4 (lower is better)
Translates to: KQESEPRAAFNSSVAKCQCSGNT*VTMPDV
Trigger: CACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCA...TTGACACTTTGCAACTGAGCTATTAAAGGCAGCCCTTGGCTCCGACTCCTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CCA 90 bp AAGCAGGAGTCGGAGCCAAGGGCTGCCTTTAATAGCTCAGTTGCAAAGTGTCAAGACTCCATGAAACCCTaGCCGGGGCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: KQESEPRAAFNSSVAKCQDSMKP*PGLLKL
Trigger: CAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTC...TTGACACTTTGCAACTGAGCTATTAAAGGCAGCCCTTGGCTCCGACTCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CCA 90 bp CACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGACCCACTGTCCTCGTaGAGACTCAAGGCCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HSLRLCPQVSSLSVRDYLDPLSS*RLKAQS
Trigger: GGACTGGGCCTTGAGTCTCCACGAGGACAGTGGGTC...CAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 72 bp CCGCTGCAGCCAGTAAGGAAGAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGTGATCAGGAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLQPVRKKRFYD*VQNLGGDQECG
Trigger: GCCACACTCCTGATCACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTTCTTCCTTACTGGCTGCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp GTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VNITPYRSKEEIQVCPYSQTASS*PESPSD
Trigger: ATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTG...GGAGTAGGGGCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAGATAGAGGCGGTTCATaGTCTCAATCACAACGGCAT +
Preference number: 4 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRDRGGS*SQSQRH
Trigger: ATGCCGTTGTGATTGAGATCATGAACCGCCTCTATC...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTAGCAATTCAGGAAGTTaGACACCAACACTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PGRVRVRGTRERGTEREPSNSGS*TPTLSE
Trigger: TTCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCT...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGCTGCAAATGGCCGTTTaGAGACCCTGCACATTTTCA +
Preference number: 4 (lower is better)
Translates to: RPWCACCILATSHSPASGLQMAV*RPCTFS
Trigger: TGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAG...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CAGTCTCTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAAGAGCCAAGAGTGCATaGTCTACGGCCACCACAATC +
Preference number: 4 (lower is better)
Translates to: QSLCKRLFGILLTGLSSPRAKSA*STATTI
Trigger: GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCT...TGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp CTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAGACTCCATGAAACCCTaGCCGGGGCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LFKALPTGLQSLCKRLFGDSMKP*PGLLKL
Trigger: CAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTC...TCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp ACTGGCCTCTCCTCCCCAGTGCTTCTATATAAGGCATGGTTAGAACATGGTGGGCATACAGCAGAAGGCTaGTCCACTCAGACCCACTGT +
Preference number: 4 (lower is better)
Translates to: TGLSSPVLLYKAWLEHGGHTAEG*STQTHC
Trigger: ACAGTGGGTCTGAGTGGACCAGCCTTCTGCTGTATG...CCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp GTTCAAAGGCAGCTGAGGCTCCTGAGCAAAGTGATGAAACAGCTGGAGGGTGTGCGAAGGTTCTGCAAATaGCCGTTTGAAGACCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQRQLRLLSKVMKQLEGVRRFCK*PFEDPA
Trigger: TGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCG...CACACCCTCCAGCTGTTTCATCACTTTGCTCAGGAGCCTCAGCTGCCTTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp CTCTCCTCCCCAGTGCTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCCGAAGGTTCTGCAAATaGCCGTTTGAAGACCCTGCA +
Preference number: 4 (lower is better)
Translates to: LSSPVLLYKAWLEHGGGGRRFCK*PFEDPA
Trigger: TGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCG...GCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGACTTTGGTTTCATCTTTaGCATCCTGGGCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRLWFHL*HPGRVL
Trigger: TAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAG...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp ATTAGCCACTTCACACAGCCCAGCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTCTTTGGTTTCATCTTTaGCATCCTGGGCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: ISHFTQPSIRAKFRLLSPLWFHL*HPGRVL
Trigger: TAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAG...AGGGGACAGCAGCCTGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTGGCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAGCTAGATGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: PGKEVLRESLSHFSHRARWQMRV*TSEPRV
Trigger: CACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCA...TCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp GTTCAAAGGCAGCTGAGGCTCCTGAGCAAAGTGATGAAACAGCTGGAGGGTGTGGAGAGACTAGGTAGATaGGCAGTTGTCTCTTGTAGC +
Preference number: 4 (lower is better)
Translates to: VQRQLRLLSKVMKQLEGVERLGR*AVVSCS
Trigger: GCTACAAGAGACAACTGCGCATCTACCTAGTCTCTC...CACACCCTCCAGCTGTTTCATCACTTTGCTCAGGAGCCTCAGCTGCCTTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAAGTTTCTGTTGGATGTaGCGTGGTTTATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRSFCWM*RGLSGM
Trigger: CATCCCTGATAAACCACGGCACATCCAACAGAAACT...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGTCATCTTTGACATCCTaGGCGAGTTCTATGACCACT +
Preference number: 4 (lower is better)
Translates to: RPWCACCILATSHSPASGSSLTS*ASSMTT
Trigger: AGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGA...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp ATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGCGATAGGTCATGTTaGCACAGCCACGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: IFTALFKALPTGLQSLCKSDRSC*HSHAST
Trigger: TGTGGAAGCGTGGCTGTGCCAACATGACCTATCGCT...CTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp CTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTGACTCCATGAAACCCTaGCCGGGGCTCCTCAAACTG +
Preference number: 4 (lower is better)
Translates to: LLYKAWLEHGGGGSAVILDSMKP*PGLLKL
Trigger: CAGTTTGAGGAGCCCCGGCCAGGGTTTCATGGAGTC...AAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp CTCTCCTCCCCAGTGCTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCACTTGGTTCAGAATCTaGGAGGTGATCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LSSPVLLYKAWLEHGGGGTWFRI*EVIRSV
Trigger: CACACTCCTGATCACCTCCCAGATTCTGAACCAAGT...GCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGAGAGATTCTACGACTTaGTTCAGAATCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RPWCACCILATSHSPASGRDSTT*FRIWEV
Trigger: CACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCT...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGGACACTCAGCCATGGTaGGGAAGTCATTATTGTTAT +
Preference number: 4 (lower is better)
Translates to: RPWCACCILATSHSPASGDTQPW*GSHYCY
Trigger: ATAACAATAATGACTTCCTCACCATGGCTGAGTGTC...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp GAAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCGGATTAAGGCAAAGGTaGAGTACTCCAGGAACCCGA +
Preference number: 4 (lower is better)
Translates to: ETIFTALFKALPTGLQSLGLRQR*STPGTR
Trigger: TCGGGTTCCTGGAGTACTTCACCTTTGCCTTAATCC...GAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp ATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGGGATTAAGGCAAAGGTaGAGTACTCCAGGAACCCGA +
Preference number: 4 (lower is better)
Translates to: IFTALFKALPTGLQSLCKGLRQR*STPGTR
Trigger: TCGGGTTCCTGGAGTACTTCACCTTTGCCTTAATCC...CTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp AGTGACCACGGATATAACGCTCATCGTTTCAAAAGCCAACTGCCATACGCCAATCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: SDHGYNAHRFKSQLPYANQTASS*PESPSD
Trigger: ATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTG...ATTGGCGTATGGCAGTTGGCTTTTGAAACGATGAGCGTTATATCCGTGGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR TCA 90 bp CTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTCAAACTGCCTCTTCATaGCCAGAGTCCCCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: LLYKAWLEHGGGGSAVILQTASS*PESPSD
Trigger: ATCGCTGGGGGACTCTGGTCATGAAGAGGCAGTTTG...AAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp CTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTGCTTTGGCAAATGCGAGTATaGACTTCAGAGCCAAGAGTG +
Preference number: 4 (lower is better)
Translates to: LCKRLFGILLTGLSSPVLWQMRV*TSEPRV
Trigger: CACTCTTGGCTCTGAAGTTCATACTCGCATTTGCCA...AAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp GGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCACTTGGTTCAGAATCTaGGAGGTGATCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRRFCKWPFEDPAHFQGITWFRI*EVIRSV
Trigger: CACACTCCTGATCACCTCCCAGATTCTGAACCAAGT...GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CCA 90 bp CTCTCCTCCCCAGTGCTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCAGAGATTCTACGACTTaGTTCAGAATCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSPVLLYKAWLEHGGGGRDSTT*FRIWEV
Trigger: CACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCT...GCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 72 bp ACGCCAATACTGGCCGAAGGTTCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTCAAGGCATCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: TPILAEGSANGR*KTLHIFKASEL
Trigger: CAACTCAGATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp ACGCCAATACTGGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTCTTTGGTTTCATCTTTaGCATCCTGGGCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: TPILAEGSANGRLKTLHILWFHL*HPGRVL
Trigger: TAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAG...AATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGTATTGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp TCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGATAGAGGCGGTTCATaGTCTCAATCACAACGGCAT +
Preference number: 4 (lower is better)
Translates to: SSQHSLRLCPQVSSLSVRDRGGS*SQSQRH
Trigger: ATGCCGTTGTGATTGAGATCATGAACCGCCTCTATC...TCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp TTGCAAAGTGTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LQSVNITPYRSKEEIQVCSESGR*SGVWPS
Trigger: GCTTGGCCACACTCCTGATCACCTCCCAGATTCTGA...GCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGACACTTTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CCCCTTTCATCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTCAGAATCTGGGAGGTaGTCAGGAGTGTGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: PLSSGRTRKQSSQHSLRLSESGR*SGVWPS
Trigger: GCTTGGCCACACTCCTGATCACCTCCCAGATTCTGA...GAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGATGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp GAAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCCTGCAAATGGCCGTTTaGAGACCCTGCACATTTTCA +
Preference number: 4 (lower is better)
Translates to: ETIFTALFKALPTGLQSLLQMAV*RPCTFS
Trigger: TGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAG...GAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR GCA 90 bp CCCCTTTCATCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCCGGGGCTCCTCAAACTaGCTCTTCATGACCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PLSSGRTRKQSSQHSLRLRGSSN*LFMTRV
Trigger: GACTCTGGTCATGAAGAGGCAGTTTGAGGAGCCCCG...GAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGATGAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR GCA 90 bp CCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAGCTAGAAGCTTCATTTGCTGTTaGTTGAGTGCCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: PGKEVLRESLSHFSHRARSFICC*LSASKD
Trigger: ATCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCT...TCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CCA 90 bp TCTTGGAGAAGCAGGAGTCGGAGCCAAGGGCTGCCTTTAATAGCTCAGTTGCAATCATCTTTGACATCCTaGGCGAGTTCTATGACCACT +
Preference number: 4 (lower is better)
Translates to: SWRSRSRSQGLPLIAQLQSSLTS*ASSMTT
Trigger: AGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGA...TTGCAACTGAGCTATTAAAGGCAGCCCTTGGCTCCGACTCCTGCTTCTCCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CCA 90 bp TCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGAGCGATAGGTCATGTTaGCACAGCCACGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: SGRTRKQSSQHSLRLCPQSDRSC*HSHAST
Trigger: TGTGGAAGCGTGGCTGTGCCAACATGACCTATCGCT...CTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp AAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGATAGAGGCGGTTCATaGTCTCAATCACAACGGCAT +
Preference number: 4 (lower is better)
Translates to: KQSSQHSLRLCPQVSSLSDRGGS*SQSQRH
Trigger: ATGCCGTTGTGATTGAGATCATGAACCGCCTCTATC...AGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR GCA 90 bp CTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGAACTGGCCGAAGGTTCTaGAAATGGCCGTTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: LYKAWLEHGGGGSAVILRTGRRF*KWPFED
Trigger: GTCTTCAAACGGCCATTTGCAGAACCTTCGGCCAGT...TCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp AATGCGAGTATGAACTTCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCTCATCTTTGACATCCTaGGCGAGTTCTATGACCACT +
Preference number: 4 (lower is better)
Translates to: NASMNFRAKSACSTATTISSLTS*ASSMTT
Trigger: AGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGA...GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR CCA 90 bp ATAATAGGGTCCCTGGGGTTAGAAGTGACTGGCACCTACTGTGAATGTCATGTGACTTGGTTCAGAATCTaGGAGGTGATCAGGAGTGTG +
Preference number: 4 (lower is better)
Translates to: IIGSLGLEVTGTYCECHVTWFRI*EVIRSV
Trigger: CACACTCCTGATCACCTCCCAGATTCTGAACCAAGT...CACATGACATTCACAGTAGGTGCCAGTCACTTCTAACCCCAGGGACCCTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp ATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAACTTCAGAGCCAAGCTTTGGTTTCATCTTTaGCATCCTGGGCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: MCRGLSGMANASMNFRAKLWFHL*HPGRVL
Trigger: TAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAG...CTTGGCTCTGAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR TCA 90 bp AGTCTCTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGAGCAATTCAGGAAGTTaGACACCAACACTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLSVRDYLESCSLASPPQSNSGS*TPTLSE
Trigger: TTCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCT...CTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp ATAATAGGGTCCCTGGGGTTAGAAGTGACTGGCACCTACTGTGAATGTCATGTGTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACA +
Preference number: 4 (lower is better)
Translates to: IIGSLGLEVTGTYCECHVCIHLW*HSNQST
Trigger: TGTGCTCTGATTGGAATGTCACCACAAGTGAATGCA...CACATGACATTCACAGTAGGTGCCAGTCACTTCTAACCCCAGGGACCCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp TCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGCTCTTACCTGTTGCTTaGGTGCCTCCAAAGATTCGA +
Preference number: 4 (lower is better)
Translates to: SGRTRKQSSQHSLRLCPQLLPVA*VPPKIR
Trigger: TCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAG...CTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR GCA 90 bp ATAATAGGGTCCCTGGGGTTAGAAGTGACTGGCACCTACTGTGAATGTCATGTGAGTTTCTGTTGGATGTaGCGTGGTTTATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: IIGSLGLEVTGTYCECHVSFCWM*RGLSGM
Trigger: CATCCCTGATAAACCACGGCACATCCAACAGAAACT...CACATGACATTCACAGTAGGTGCCAGTCACTTCTAACCCCAGGGACCCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR GCA 90 bp CACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGACTGCTCTTACCTGTTaGTTGAGTGCCTCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: HSLRLCPQVSSLSVRDYLTALTC*LSASKD
Trigger: ATCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGT...CAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CCA 90 bp CACCACAATCAGAACAAGGTCTGTTTTGGATTCTGGAAAGACTGCATTCACTTGCATACAGCAGAAGGCTaGTCCACTCAGACCCACTGT +
Preference number: 4 (lower is better)
Translates to: HHNQNKVCFGFWKDCIHLHTAEG*STQTHC
Trigger: ACAGTGGGTCTGAGTGGACCAGCCTTCTGCTGTATG...CAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CCA 90 bp TTGCAAAGTGTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCTTGCTGCAGTCTTTGTaGTCACAGGCAGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: LQSVNITPYRSKEEIQVCLLQSL*SQAGHL
Trigger: CAAGTGACCTGCCTGTGACCACAAAGACTGCAGCAA...GCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGACACTTTGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
3UTR CAA 72 bp CCATTGCTTAGCTATTCTACTTGCTTAGCCTCACCCTaGGTGACATTACTGATCTGGGTTGGGCTATCCCAT +
Preference number: 4 (lower is better)
Translates to: PLLSYSTCLASP*VTLLIWVGLSH
Trigger: ATGGGATAGCCCAACCCAGATCAGTAATGTCACCAAGGGTGAGGCTAAGCAAGTAGAATAGCTAAGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
3UTR CAA 72 bp TGCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTaGGATTCTGGAAAGACTGCATTCACTTGTGGTGAC +
Preference number: 4 (lower is better)
Translates to: CSTATTIRTRSV*DSGKTAFTCGD
Trigger: GTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
3UTR CAA 72 bp CTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTaGGATGTGCCGTGGTTTATCAGGGATGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: LQRFEFQSGQFL*DVPWFIRDGKC
Trigger: GCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR GCA 90 bp TATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGAAACAGTTTCTGTTGGATGTaGCGTGGTTTATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: YKAWLEHGGGGSAVILRNSFCWM*RGLSGM
Trigger: CATCCCTGATAAACCACGGCACATCCAACAGAAACT...GTTTCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR GCA 90 bp ACTGCATTCACTTGTGGTGACATTCCAATCAGAGCACAGTTAGTGACCACGGATGAGCAGACTCAGAGATaGAAGTGGATAGTGACTTAC +
Preference number: 4 (lower is better)
Translates to: TAFTCGDIPIRAQLVTTDEQTQR*KWIVTY
Trigger: GTAAGTCACTATCCACTTGCATCTCTGAGTCTGCTC...ATCCGTGGTCACTAACTGTGCTCTGATTGGAATGTCACCACAAGTGAATGCAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
CDS-3UTR CCA 90 bp CTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGATCATCTTTGACATCCTaGGCGAGTTCTATGACCACT +
Preference number: 4 (lower is better)
Translates to: LYKAWLEHGGGGSAVILRSSLTS*ASSMTT
Trigger: AGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGA...TCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CCA 90 bp TCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAAAGAGATTCTACGACTTaGTTCAGAATCTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SLRLCPQVSSLSVRDYLERDSTT*FRIWEV
Trigger: CACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCT...TTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp CACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGAGCAATTCAGGAAGTTaGACACCAACACTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: HSLRLCPQVSSLSVRDYLSNSGS*TPTLSE
Trigger: TTCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCT...CAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp ATAATAGGGTCCCTGGGGTTAGAAGTGACTGGCACCTACTGTGAATGTCATGTGCATTTTCAAGGCATCTaGGTTGACTTCAGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: IIGSLGLEVTGTYCECHVHFQGI*VDFSEV
Trigger: AACTTCACTGAAGTCAACTCAGATGCCTTGAAAATG...CACATGACATTCACAGTAGGTGCCAGTCACTTCTAACCCCAGGGACCCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR TCA 90 bp CCCCTTTCATCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTGCATTCACTTGTGGTaGCATTCCAATCAGAGCACA +
Preference number: 4 (lower is better)
Translates to: PLSSGRTRKQSSQHSLRLCIHLW*HSNQST
Trigger: TGTGCTCTGATTGGAATGTCACCACAAGTGAATGCA...GAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGATGAAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR TCA 90 bp CTTCTATATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTCATTTTCAAGGCATCTaGGTTGACTTCAGTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLYKAWLEHGGGGSAVILHFQGI*VDFSEV
Trigger: AACTTCACTGAAGTCAACTCAGATGCCTTGAAAATG...AAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATATAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp GGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGATGCAGCGGGAACACTaGGGTCACGATGCCAGACGT +
Preference number: 5 (lower is better)
Translates to: GPGRVRVRGTRERGTEREMQREH*GHDARR
Trigger: ACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCAT...CTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp ACTCCCCGACCACCGCTGCCTCAGCATGGTTCCCACCATGGGTATAATGGGCACTGCCACCAGCTTCATTaGCTGTTGCTTGAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: TPRPPLPQHGSHHGYNGHCHQLH*LLLECL
Trigger: GAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGCA...GTGCCCATTATACCCATGGTGGGAACCATGCTGAGGCAGCGGTGGTCGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp GAGCAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTTGCCACCAGCTTCATTaGCTGTTGCTTGAGTGCCTC +
Preference number: 5 (lower is better)
Translates to: EQSDETAGGCVRPWEGPSCHQLH*LLLECL
Trigger: GAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGCA...ACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCACTATGGGCTGGTACTaGAGAGCAAACCGAGTGTAC +
Preference number: 5 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSTMGWY*RANRVY
Trigger: GTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGT...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214409.2
CDS TCA 90 bp CTTCAGTGTCATGCAGCGGGAACACTTGGGTCACGATGCCAGACGTaGGCAGTCTCCTCATCAGCGACTTCCCAGGGTACAGTTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LQCHAAGTLGSRCQT*AVSSSATSQGTVWP
Trigger: AGGCCAAACTGTACCCTGGGAAGTCGCTGATGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS CCA 90 bp TCCTCCAGCTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTTaGGTCACGATGCCAGACGTGAGCAGTCTCCTCATCAGCGACTTC +
Preference number: 5 (lower is better)
Translates to: SSSFFRASVSCSGNT*VTMPDVSSLLISDF
Trigger: GAAGTCGCTGATGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS-3UTR CAA 90 bp AAGCAAGGAGGAGATTCAGGTGTGCCCCTACTCCCCGACCACCGCTGCCTCAGCTCTTTGGTTTCATCTTaGACATCCTGGGCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: KQGGDSGVPLLPDHRCLSSLVSS*TSWASS
Trigger: AGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGA...GCTGAGGCAGCGGTGGTCGGGGAGTAGGGGCACACCTGAATCTCCTCCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAGCTAGAATGCAGCGGGAACACTaGGGTCACGATGCCAGACGT +
Preference number: 5 (lower is better)
Translates to: PGKEVLRESLSHFSHRARMQREH*GHDARR
Trigger: ACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCAT...TCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGTCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTC +
Preference number: 5 (lower is better)
Translates to: QSDETAGGCVRPWEGPSESANGR*KTLHIF
Trigger: GAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGA...CTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCTTCATTTGCTGTaGCTTGAGTGCCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: PGRVRVRGTRERGTEREPQLHLL*LECLQR
Trigger: TCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCTG...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PGRVRVRGTRERGTEREPKRFYD*VQNLGG
Trigger: ACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTT...AGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp GAGCAAAGTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EQSDETAGGCVRPWEGPSKRFYD*VQNLGG
Trigger: ACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTT...ACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCACTTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCATCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTC +
Preference number: 5 (lower is better)
Translates to: RVRVRGTRERGTEREPQPSANGR*KTLHIF
Trigger: GAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGA...TGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp GGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGTTCATTTGCTGTTGCTaGAGTGCCTCCAAAGATTCG +
Preference number: 5 (lower is better)
Translates to: GRVRVRGTRERGTEREPQFICCC*SASKDS
Trigger: CGAATCTTTGGAGGCACTCAAGCAACAGCAAATGAA...CTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp GTGATGAAACAGCTGGAGGGTGTGTGCGGCCCTGGGAGGGTCCGAGTGAGAGGCTTTTTGAGCCATTCTTaGGTTTCATCTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: VMKQLEGVCGPGRVRVRGFLSHS*VSSLTS
Trigger: GGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAA...GCCTCTCACTCGGACCCTCCCAGGGCCGCACACACCCTCCAGCTGTTTCATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGTCTATGGGCTGGTACTaGAGAGCAAACCGAGTGTAC +
Preference number: 5 (lower is better)
Translates to: RPWCACCILATSHSPASGSMGWY*RANRVY
Trigger: GTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGA...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CAA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGATGCCACCAGCTTCATTaGCTGCAGTCTTTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRCHQLH*LQSLWS
Trigger: TGACCACAAAGACTGCAGCAAATGAAGCTGGTGGCA...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS GCA 90 bp AGCTTCATTTGCTGCAGTCTTTGTGGTCACAGGCAGGTCACTTGCTaGTCTGACTTGCCTCCCCACTCCCCAAGTAGTCTTCACTATGAC +
Preference number: 5 (lower is better)
Translates to: SFICCSLCGHRQVTC*SDLPPHSPSSLHYD
Trigger: GTCATAGTGAAGACTACTTGGGGAGTGGGGAGGCAAGTCAGAGCAGCAAGTGACCTGCCTGTGACCACAAAGACTGCAGCAAATGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS GCA 90 bp TCCTGGTACTCCTCCTTCAGGTTTTCTGCCACCAGCTTCATTTGCTaGAGTCTTTGTGGTCACAGGCAGGTCACTTGCTGCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: SWYSSFRFSATSFIC*SLCGHRQVTCCSDL
Trigger: CAAGTCAGAGCAGCAAGTGACCTGCCTGTGACCACAAAGACTGCAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAGGAGTACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS GCA 90 bp TCTTCCTGGTACTCCTCCTTCAGGTTTTCTGCCACCAGCTTCATTTaGTGCAGTCTTTGTGGTCACAGGCAGGTCACTTGCTGCTCTGAC +
Preference number: 5 (lower is better)
Translates to: SSWYSSFRFSATSFI*CSLCGHRQVTCCSD
Trigger: GTCAGAGCAGCAAGTGACCTGCCTGTGACCACAAAGACTGCAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAGGAGTACCAGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS-3UTR CAA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAAGTAACAGTCGGACATaGGAGGCACCAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRSNSRT*EAPTRY
Trigger: ATACCTTGTTGGTGCCTCCAATGTCCGACTGTTACT...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp GCTCTTACCTGTTGCTTGAGTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTATGCAGCGGGAACACTaGGGTCACGATGCCAGACGT +
Preference number: 5 (lower is better)
Translates to: ALTCCLSASKDSNSNLASMQREH*GHDARR
Trigger: ACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCAT...ACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CAA 90 bp GAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGACGAAGTACAGAGCAATaGTCTCCCCAAAGTAGCTAC +
Preference number: 5 (lower is better)
Translates to: EAPGKEVLRESLSHFSHRRSTEQ*SPQSSY
Trigger: GTAGCTACTTTGGGGAGACAATTGCTCTGTACTTCG...TCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CAA 90 bp ATTAGCCACTTCACACAGCCCAGCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTGTGGACCATATGAGGTaGAACGAGGCAAAGATGACA +
Preference number: 5 (lower is better)
Translates to: ISHFTQPSIRAKFRLLSPVDHMR*NEAKMT
Trigger: TGTCATCTTTGCCTCGTTCAACCTCATATGGTCCAC...AGGGGACAGCAGCCTGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTGGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042546.4
CDS-3UTR CAA 90 bp GGCCCTGGGAGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGTTCAAGGCATCTGAGTaGACTTCAGTGAAGTTATTT +
Preference number: 5 (lower is better)
Translates to: GPGRVRVRGTRERGTEREFKASE*TSVKLF
Trigger: AAATAACTTCACTGAAGTCAACTCAGATGCCTTGAA...CTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCTCCCAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCACTTTTCCCACAGAGCTAGAAGTAACAGTCGGACATaGGAGGCACCAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: PGKEVLRESLSHFSHRARSNSRT*EAPTRY
Trigger: ATACCTTGTTGGTGCCTCCAATGTCCGACTGTTACT...TCTAGCTCTGTGGGAAAAGTGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AGGGTCCGAGTGAGAGGCACCAGGGAAAGAGGTACTGAGAGAGAGCCTCAGCCAAAGCAATTCAGGAAGTaGAACACCAACACTTTCAGA +
Preference number: 5 (lower is better)
Translates to: RVRVRGTRERGTEREPQPKQFRK*NTNTFR
Trigger: TCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCTT...TGGCTGAGGCTCTCTCTCAGTACCTCTTTCCCTGGTGCCTCTCACTCGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AGACCTTGGTGTGCCTGCTGCATATTAGCCACTTCACACAGCCCAGCATCAGGGTTCATTTGCTGTTGCTaGAGTGCCTCCAAAGATTCG +
Preference number: 5 (lower is better)
Translates to: RPWCACCILATSHSPASGFICCC*SASKDS
Trigger: CGAATCTTTGGAGGCACTCAAGCAACAGCAAATGAA...CCCTGATGCTGGGCTGTGTGAAGTGGCTAATATGCAGCAGGCACACCAAGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp AGTCTCTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGCGAAGTACAGAGCAATaGTCTCCCCAAAGTAGCTAC +
Preference number: 5 (lower is better)
Translates to: SLSVRDYLESCSLASPPQRSTEQ*SPQSSY
Trigger: GTAGCTACTTTGGGGAGACAATTGCTCTGTACTTCG...CTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp GGCCGAAGGTTCTGCAAATGGCCGTTTGAAGACCCTGCACATTTTCAAGGCATCGTGGACCATATGAGGTaGAACGAGGCAAAGATGACA +
Preference number: 5 (lower is better)
Translates to: GRRFCKWPFEDPAHFQGIVDHMR*NEAKMT
Trigger: TGTCATCTTTGCCTCGTTCAACCTCATATGGTCCAC...GATGCCTTGAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGAACCTTCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CAA 90 bp ACTGGCCTCTCCTCCCCAGTGCTTCTATATAAGGCATGGTTAGAACATGGTGGGGTGGACCATATGAGGTaGAACGAGGCAAAGATGACA +
Preference number: 5 (lower is better)
Translates to: TGLSSPVLLYKAWLEHGGVDHMR*NEAKMT
Trigger: TGTCATCTTTGCCTCGTTCAACCTCATATGGTCCAC...CCCACCATGTTCTAACCATGCCTTATATAGAAGCACTGGGGAGGAGAGGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp TCTGGCCAGTTTCTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTCTTTGGTTTCATCTTaGACATCCTGGGCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: SGQFLLDVPWFIRDGKCESLVSS*TSWASS
Trigger: AGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGA...CTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAAACTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR CAA 90 bp GTGCCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGATGTGCCGTGAGTAACAGTCGGACATaGGAGGCACCAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: VPPKIRIPIWPVSVGCAVSNSRT*EAPTRY
Trigger: ATACCTTGTTGGTGCCTCCAATGTCCGACTGTTACT...CACGGCACATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR CAA 90 bp AGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTGCTTCTATATATCTATGGGCTGGTACTaGAGAGCAAACCGAGTGTAC +
Preference number: 5 (lower is better)
Translates to: RDYLESCSLASPPQCFYISMGWY*RANRVY
Trigger: GTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGA...TATATAGAAGCACTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CAA 90 bp CTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGACACTGCTCTTACCTGTaGCTTGAGTGCCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LFKALPTGLQSLCKRLFGHCSYL*LECLQR
Trigger: TCTTTGGAGGCACTCAAGCAACAGGTAAGAGCAGTG...TCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp AAATGCGAGTATGAACTTCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATAGTAACAGTCGGACATaGGAGGCACCAACAAGGTAT +
Preference number: 5 (lower is better)
Translates to: KCEYELQSQECMLYGHHNSNSRT*EAPTRY
Trigger: ATACCTTGTTGGTGCCTCCAATGTCCGACTGTTACT...ATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR CAA 90 bp AATGCGAGTATGAACTTCAGAGCCAAGAGTGCATGCTCTACGGCCACCACAATCAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: NASMNFRAKSACSTATTIKRFYD*VQNLGG
Trigger: ACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTT...GATTGTGGTGGCCGTAGAGCATGCACTCTTGGCTCTGAAGTTCATACTCGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CAA 90 bp ATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAAGAGATTCTACGACTaGGTTCAGAATCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: IFTALFKALPTGLQSLCKKRFYD*VQNLGG
Trigger: ACCTCCCAGATTCTGAACCAAGTCGTAGAATCTCTT...CTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp ATTAGCCACTTCACACAGCCCAGCATCAGGGCTAAGTTCAGGCTGCTGTCCCCTTTCAAGGCATCTGAGTaGACTTCAGTGAAGTTATTT +
Preference number: 5 (lower is better)
Translates to: ISHFTQPSIRAKFRLLSPFKASE*TSVKLF
Trigger: AAATAACTTCACTGAAGTCAACTCAGATGCCTTGAA...AGGGGACAGCAGCCTGAACTTAGCCCTGATGCTGGGCTGTGTGAAGTGGCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp CTCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGATCTGCAAATGGCCGTTaGAAGACCCTGCACATTTTC +
Preference number: 5 (lower is better)
Translates to: LFKALPTGLQSLCKRLFGSANGR*KTLHIF
Trigger: GAAAATGTGCAGGGTCTTCAAACGGCCATTTGCAGA...TCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp TATAAGGCATGGTTAGAACATGGTGGGGGTGGCTCTGCAGTGATTCTTAGAAACGCTCTTACCTGTTGCTaGAGTGCCTCCAAAGATTCG +
Preference number: 5 (lower is better)
Translates to: YKAWLEHGGGGSAVILRNALTCC*SASKDS
Trigger: CGAATCTTTGGAGGCACTCAAGCAACAGGTAAGAGC...GTTTCTAAGAATCACTGCAGAGCCACCCCCACCATGTTCTAACCATGCCTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS GCA 90 bp CTCCTTCAGGTTTTCTGCCACCAGCTTCATTTGCTGTTGCTTGAGTaGCTCCAAAGATTCGAATTCCAATCTGGCCAGTTTCTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LLQVFCHQLHLLLLE*LQRFEFQSGQFLLD
Trigger: ATCCAACAGAAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGCAGAAAACCTGAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp TCTGGTAGAACAAGGAAACAATCTTCACAGCACTCTTTAAGGCTCTGCCCACAGCGAAGTACAGAGCAATaGTCTCCCCAAAGTAGCTAC +
Preference number: 5 (lower is better)
Translates to: SGRTRKQSSQHSLRLCPQRSTEQ*SPQSSY
Trigger: GTAGCTACTTTGGGGAGACAATTGCTCTGTACTTCG...CTGTGGGCAGAGCCTTAAAGAGTGCTGTGAAGATTGTTTCCTTGTTCTACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp ACTGCATTCACTTGTGGTGACATTCCAATCAGAGCACAGTTAGTGACCACGGATTCTTTGGTTTCATCTTaGACATCCTGGGCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: TAFTCGDIPIRAQLVTTDSLVSS*TSWASS
Trigger: AGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGA...ATCCGTGGTCACTAACTGTGCTCTGATTGGAATGTCACCACAAGTGAATGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000216081.2
CDS-3UTR CAA 90 bp AGTCTCTCTGTAAGAGACTATTTGGAATCCTGCTCACTGGCCTCTCCTCCCCAGTTCAAGGCATCTGAGTaGACTTCAGTGAAGTTATTT +
Preference number: 5 (lower is better)
Translates to: SLSVRDYLESCSLASPPQFKASE*TSVKLF
Trigger: AAATAACTTCACTGAAGTCAACTCAGATGCCTTGAA...CTGGGGAGGAGAGGCCAGTGAGCAGGATTCCAAATAGTCTCTTACAGAGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214507.2
CDS-3UTR CAA 90 bp TTGCAAAGTGTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCCAGCTTCATTTGCTGTaGCTTGAGTGCCTCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LQSVNITPYRSKEEIQVCQLHLL*LECLQR
Trigger: TCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCTG...GCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGACACTTTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp TTGCAAAGTGTCAACATAACACCATACAGAAGCAAGGAGGAGATTCAGGTGTGCTCTTTGGTTTCATCTTaGACATCCTGGGCGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LQSVNITPYRSKEEIQVCSLVSS*TSWASS
Trigger: AGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGA...GCACACCTGAATCTCCTCCTTGCTTCTGTATGGTGTTATGTTGACACTTTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS-3UTR CAA 90 bp ATAATAGGGTCCCTGGGGTTAGAAGTGACTGGCACCTACTGTGAATGTCATGTGAAGCAATTCAGGAAGTaGAACACCAACACTTTCAGA +
Preference number: 5 (lower is better)
Translates to: IIGSLGLEVTGTYCECHVKQFRK*NTNTFR
Trigger: TCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCTT...CACATGACATTCACAGTAGGTGCCAGTCACTTCTAACCCCAGGGACCCTATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS CCA 90 bp ATGATTCTGTTTTTGAGCCATTCTTTGGTTTCATCTTTGACATCCTaGGCGAGTTCTATGACCACTAGAGGTGTGAAGGAGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: MILFLSHSLVSSLTS*ASSMTTRGVKELSQ
Trigger: TTGTGAGAGCTCCTTCACACCTCTAGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAACAGAATCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS-3UTR CAA 90 bp TTCTGTTGGATGTGCCGTGGTTTATCAGGGATGGCAAATGCGAGTATGAACTTCAAGCAATTCAGGAAGTaGAACACCAACACTTTCAGA +
Preference number: 5 (lower is better)
Translates to: FCWMCRGLSGMANASMNFKQFRK*NTNTFR
Trigger: TCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCTT...GAAGTTCATACTCGCATTTGCCATCCCTGATAAACCACGGCACATCCAACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS-3UTR CAA 90 bp TCTTTAAGGCTCTGCCCACAGGTCTCCAGTCTCTCTGTAAGAGACTATTTGGAAAAGCAATTCAGGAAGTaGAACACCAACACTTTCAGA +
Preference number: 5 (lower is better)
Translates to: SLRLCPQVSSLSVRDYLEKQFRK*NTNTFR
Trigger: TCTGAAAGTGTTGGTGTTCAACTTCCTGAATTGCTT...TTCCAAATAGTCTCTTACAGAGAGACTGGAGACCTGTGGGCAGAGCCTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000214283.2
ENSMUST00000214507.2
CDS TCA 90 bp TCGTCTCTAGCTCTAAGATTCTCAAGTTCGTGTTTGATAATGAACTaGCACTCAGCCATGGTGAGGAAGTCATTATTGTTATCATGGAAA +
Preference number: 5 (lower is better)
Translates to: SSLALRFSSSCLIMN*HSAMVRKSLLLSWK
Trigger: TTTCCATGATAACAATAATGACTTCCTCACCATGGCTGAGTGTCAGTTCATTATCAAACACGAACTTGAGAATCTTAGAGCTAGAGACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS CCA 72 bp AGGTGTCCTTCAGCACAGGGGACAGGACGGCCAGCATaGTGCAGCTCAGGTAGCTTCCTTCCCATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RCPSAQGTGRPA*CSSGSFLPIFL
Trigger: CAGGAAGATGGGAAGGAAGCTACCTGAGCTGCACCATGCTGGCCGTCCTGTCCCCTGTGCTGAAGGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS GCA 72 bp TGTCCTTCAGCACAGGGGACAGGACGGCCAGCATGGTaGAGCTCAGGTAGCTTCCTTCCCATCTTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: CPSAQGTGRPAW*SSGSFLPIFLV
Trigger: TACCAGGAAGATGGGAAGGAAGCTACCTGAGCTGCACCATGCTGGCCGTCCTGTCCCCTGTGCTGAAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS CAA 90 bp GTCCTCCAGCTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTaGGGTCACGATGCCAGACGTGAGCAGTCTCCTCATCAGCGACTT +
Preference number: 6 (lower is better)
Translates to: VLQLLQGFSVMQREH*GHDARREQSPHQRL
Trigger: AAGTCGCTGATGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAGCTGGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS CCA 72 bp GCAGTCTCCTCATCAGCGACTTCCCAGGGTACAGTTTaGCCTGTGGGTAGCCAGGGATCATCTTCTCGTCTC +
Preference number: 6 (lower is better)
Translates to: AVSSSATSQGTV*PVGSQGSSSRL
Trigger: GAGACGAGAAGATGATCCCTGGCTACCCACAGGCCAAACTGTACCCTGGGAAGTCGCTGATGAGGAGACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS CAA 72 bp CGCTTCCACACCTCCAGGATCACTATGGGCTGGTACTaGAGAGCAAACCGAGTGTACCACGTGTCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RFHTSRITMGWY*RANRVYHVSSS
Trigger: GCTGGAGGACACGTGGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGTGATCCTGGAGGTGTGGAAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214409.2
CDS TCA 72 bp GCTTCCACACCTCCAGGATCACTATGGGCTGGTACTTaGGAGCAAACCGAGTGTACCACGTGTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: ASTPPGSLWAGT*EQTECTTCPPA
Trigger: AGCTGGAGGACACGTGGTACACTCGGTTTGCTCTCAAGTACCAGCCCATAGTGATCCTGGAGGTGTGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214409.2
CDS CCA 72 bp TTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTTaGGTCACGATGCCAGACGTGAGCAGTCTCCTCATC +
Preference number: 6 (lower is better)
Translates to: FFRASVSCSGNT*VTMPDVSSLLI
Trigger: GATGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS CAA 72 bp CTTCTTCAGGGCTTCAGTGTCATGCAGCGGGAACACTaGGGTCACGATGCCAGACGTGAGCAGTCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LLQGFSVMQREH*GHDARREQSPH
Trigger: ATGAGGAGACTGCTCACGTCTGGCATCGTGACCCAAGTGTTCCCGCTGCATGACACTGAAGCCCTGAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216670.2
CDS GCA 72 bp TTTGTGGTCACAGGCAGGTCACTTGCTGCTCTGACTTaGCTCCCCACTCCCCAAGTAGTCTTCACTATGACT +
Preference number: 6 (lower is better)
Translates to: FVVTGRSLAALT*LPTPQVVFTMT
Trigger: AGTCATAGTGAAGACTACTTGGGGAGTGGGGAGGCAAGTCAGAGCAGCAAGTGACCTGCCTGTGACCACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS CCA 72 bp ATAGTGACTTACTCAGCGACTTCCCAGGGTACAGTTTaGCCTGTGGGTAGCCAGGGATCATCTTCTCGTCTC +
Preference number: 6 (lower is better)
Translates to: IVTYSATSQGTV*PVGSQGSSSRL
Trigger: GAGACGAGAAGATGATCCCTGGCTACCCACAGGCCAAACTGTACCCTGGGAAGTCGCTGAGTAAGTCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216081.2
CDS CAA 90 bp TGCTGCAGTCTTTGTGGTCACAGGCAGGTCACTTGCTGCTCTGACTaGCCTCCCCACTCCCCAAGTAGTCTTCACTATGACTTCACTACA +
Preference number: 6 (lower is better)
Translates to: CCSLCGHRQVTCCSD*PPHSPSSLHYDFTT
Trigger: TGTAGTGAAGTCATAGTGAAGACTACTTGGGGAGTGGGGAGGCAAGTCAGAGCAGCAAGTGACCTGCCTGTGACCACAAAGACTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000216738.2
CDS CAA 90 bp AATCCCAGCACCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTaGGATTCTGGAAAGACTGCATTCACTTGTGGTGACATTCCAATC +
Preference number: 6 (lower is better)
Translates to: NPSTSTATTIRTRSV*DSGKTAFTCGDIPI
Trigger: GATTGGAATGTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGGTGCTGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216670.2
CDS GCA 72 bp TGCAGGTACGTTCCCATTTCCTTCTCCAGGAGGACTTaGTCATACAAGGTTGTGTCGACCTCAGACTTTAAT +
Preference number: 6 (lower is better)
Translates to: CRYVPISFSRRT*SYKVVSTSDFN
Trigger: ATTAAAGTCTGAGGTCGACACAACCTTGTATGAGCAAGTCCTCCTGGAGAAGGAAATGGGAACGTACCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214283.2
CDS CAA 72 bp ACCTCTACGGCCACCACAATCAGAACAAGGTCTGTTTaGGATTCTGGAAAGACTGCATTCACTTGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: TSTATTIRTRSV*DSGKTAFTCGD
Trigger: GTCACCACAAGTGAATGCAGTCTTTCCAGAATCCAAAACAGACCTTGTTCTGATTGTGGTGGCCGTAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000216670.2
CDS GCA 72 bp GTTTTCTGCCACCAGCTTCATTTGCTGTTGCTTGAGTaGCTCCAAAGATTCGAATTCCAATCTGGCCAGTTT +
Preference number: 6 (lower is better)
Translates to: VFCHQLHLLLLE*LQRFEFQSGQF
Trigger: AAACTGGCCAGATTGGAATTCGAATCTTTGGAGGCACTCAAGCAACAGCAAATGAAGCTGGTGGCAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042546.4
ENSMUST00000214409.2
CDS CCA 72 bp TTTTTGAGCCATTCTTTGGTTTCATCTTTGACATCCTaGGCGAGTTCTATGACCACTAGAGGTGTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: FLSHSLVSSLTS*ASSMTTRGVKE
Trigger: CTCCTTCACACCTCTAGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS CAA 90 bp TTCTTGGCAATGATTCTGTTTTTGAGCCATTCTTTGGTTTCATCTTaGACATCCTGGGCGAGTTCTATGACCACTAGAGGTGTGAAGGAG +
Preference number: 6 (lower is better)
Translates to: FLAMILFLSHSLVSS*TSWASSMTTRGVKE
Trigger: CTCCTTCACACCTCTAGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAACAGAATCATTGCCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS CAA 90 bp AATAGCTGGGCACCTCCATCTTTCTTCTTGGCAATGATTCTGTTTTaGAGCCATTCTTTGGTTTCATCTTTGACATCCTGGGCGAGTTCT +
Preference number: 6 (lower is better)
Translates to: NSWAPPSFFLAMILF*SHSLVSSLTSWASS
Trigger: AGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAACAGAATCATTGCCAAGAAGAAAGATGGAGGTGCCCAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS CAA 90 bp CCTCCATCTTTCTTCTTGGCAATGATTCTGTTTTTGAGCCATTCTTaGGTTTCATCTTTGACATCCTGGGCGAGTTCTATGACCACTAGA +
Preference number: 6 (lower is better)
Translates to: PPSFFLAMILFLSHS*VSSLTSWASSMTTR
Trigger: TCTAGTGGTCATAGAACTCGCCCAGGATGTCAAAGATGAAACCAAAGAATGGCTCAAAAACAGAATCATTGCCAAGAAGAAAGATGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2
CDS CAA 72 bp GGTCTAAACAATAGCTGGGCACCTCCATCTTTCTTCTaGGCAATGATTCTGTTTTTGAGCCATTCTTTGGTT +
Preference number: 6 (lower is better)
Translates to: GLNNSWAPPSFF*AMILFLSHSLV
Trigger: AACCAAAGAATGGCTCAAAAACAGAATCATTGCCAAGAAGAAAGATGGAGGTGCCCAGCTATTGTTTAGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000042546.4
ENSMUST00000214283.2
ENSMUST00000214409.2
ENSMUST00000216081.2
ENSMUST00000216670.2