Pregenerated sensors for ANKZF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026199Ensembl transcript IDs: ENSMUST00000127625.3, ENSMUST00000145459.9, ENSMUST00000152233.9
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGCAACTGCAGAGTCAGGAACTGGAGGGCTAGGGGCTCCCAACTaGGCAGCAAGTCGGCGCTCTGCAGCCAGAGCTCTCTTCTCCCGG | + |
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Preference number: 1 (lower is better) Translates to: LATAESGTGGLGAPN*AASRRSAARALFSR Trigger: CCGGGAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTTGCTGCCCAGTTGGGAGCCCCTAGCCCTCCAGTTCCTGACTCTGCAGTTGCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | GCAAACCGCCGTTGTTCCTCTTGCTCTTGTTCTTCCTGCTCCCTCTaGTTCCGCTGCTGTTGCTCCCGTTGCCGTCGAGCTGCCTTCTGC | + |
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Preference number: 1 (lower is better) Translates to: ANRRCSSCSCSSCSL*FRCCCSRCRRAAFC Trigger: GCAGAAGGCAGCTCGACGGCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGAAGAACAAGAGCAAGAGGAACAACGGCGGTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | CTGAGGGCAGCAAACCGCCGTTGTTCCTCTTGCTCTTGTTCTTCCTaGTCCCTCTGCTTCCGCTGCTGTTGCTCCCGTTGCCGTCGAGCT | + |
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Preference number: 1 (lower is better) Translates to: LRAANRRCSSCSCSS*SLCFRCCCSRCRRA Trigger: AGCTCGACGGCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGAAGAACAAGAGCAAGAGGAACAACGGCGGTTTGCTGCCCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | CAGCAAGTCGGCGCTCTGCAGCCAGAGCTCTCTTCTCCCGGTCACTaGGGGCAGCAAACCGCCGTTGTTCCTCTTGCTCTTGTTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QQVGALQPELSSPGH*GQQTAVVPLALVLP Trigger: AGGAAGAACAAGAGCAAGAGGAACAACGGCGGTTTGCTGCCCTCAGTGACCGGGAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GGCAACGTGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATaGGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: GNVWSRKRSRGSERE*GLGGTLHNSSSVQH Trigger: GTGCTGGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | CTGCCTCCCCTAGTGCCTTGGACCAGATTGGCCCCGCCAGCAGGTTaGGAACATCCTTATAGAGCATGGCTTCATTGTAACGCCTCAAGT | + |
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Preference number: 1 (lower is better) Translates to: LPPLVPWTRLAPPAG*EHPYRAWLHCNASS Trigger: ACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGCAACCTGCTGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | TTGAGCAGGGACTTAACTCCAGGGTCTACCAGCCCAGTGGCTAGCTaGAGCTTTAGCACCTCAACTTCCCCAGCACGACAAGCAGCTAGA | + |
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Preference number: 1 (lower is better) Translates to: LSRDLTPGSTSPVAS*SFSTSTSPARQAAR Trigger: TCTAGCTGCTTGTCGTGCTGGGGAAGTTGAGGTGCTAAAGCTGCAGCTAGCCACTGGGCTGGTAGACCCTGGAGTTAAGTCCCTGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 90 bp | ACCAGATTGGCCCCGCCAGCAGGTTGCGAACATCCTTATAGAGCATaGCTTCATTGTAACGCCTCAAGTTGGCTCCAGCAGAGCGGGATG | + |
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Preference number: 1 (lower is better) Translates to: TRLAPPAGCEHPYRA*LHCNASSWLQQSGM Trigger: CATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGCAACCTGCTGGCGGGGCCAATCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GTTGGCCCAGGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTaGCTGCGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: VGPGAERNQDEGLPA*LRWSRRQRVEQKEK Trigger: CTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTGATTTCTTTCAGCACCTGGGCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | GCCCAGGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTGACTaGGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAGAGAAGTCGA | + |
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Preference number: 1 (lower is better) Translates to: AQVLKEIKMKVSPPD*DGLEGNVWSRKRSR Trigger: TCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTGATTTCTTTCAGCACCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 90 bp | TTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTaGCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: FQRQYWLHTPSWPCL*LDSWVSFTTHLPNV Trigger: GACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| 3UTR CCA 90 bp | TCTTCATCATACACCTGCAAGGTGGTCAGCTTATGGAGTACACGCTaGAGCTCTCCAAAAGTGGGTCTGCGGGTGGTGAGAGGGATATCC | + |
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Preference number: 1 (lower is better) Translates to: SSSYTCKVVSLWSTR*SSPKVGLRVVRGIS Trigger: GGATATCCCTCTCACCACCCGCAGACCCACTTTTGGAGAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 90 bp | ATTTCTCGAGGGTCTTCATCATACACCTGCAAGGTGGTCAGCTTATaGAGTACACGCTGGAGCTCTCCAAAAGTGGGTCTGCGGGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: ISRGSSSYTCKVVSL*STRWSSPKVGLRVV Trigger: CACCACCCGCAGACCCACTTTTGGAGAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 90 bp | AGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTTaGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATCAAGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SFMRRKRALGLDVSS*DPELAQVLKEIKMK Trigger: CTTCATCTTGATTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GGCATCAAGATTCTTCTCCATGAACCTCCGGAATTCATTACGCGTTaGTTTGTCAGCTGCTACAGTATAAGGTGGCCGAGCCCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: GIKILLHEPPEFITR*FVSCYSIRWPSPRV Trigger: GACTCTAGGGCTCGGCCACCTTATACTGTAGCAGCTGACAAATCAACGCGTAATGAATTCCGGAGGTTCATGGAGAAGAATCTTGATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | TCTCTTCTCTCACTGGTTTCCAGTGTGTCTCAGGAGAGTGAAATCTaGCCATTTCTCGAGGGTCTTCATCATACACCTGCAAGGTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SLLSLVSSVSQESEI*PFLEGLHHTPARWS Trigger: TGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAATGGTCAGATTTCACTCTCCTGAGACACACTGGAAACCAGTGAGAGAAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GTCAATTCTACTAGCTCCAACTCTACTTCGGAACCATCTTCTTCCTaGGACTCTGAACCTTGTTTGAGTGGTTCTTCATCCTGCCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VNSTSSNSTSEPSSS*DSEPCLSGSSSCPR Trigger: CCTTGGGCAGGATGAAGAACCACTCAAACAAGGTTCAGAGTCTCAGGAAGAAGATGGTTCCGAAGTAGAGTTGGAGCTAGTAGAATTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GCACCCGAGCCTTGTTGTAATCATAGGCATCAAGATTCTTCTCCATaGACCTCCGGAATTCATTACGCGTTGATTTGTCAGCTGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: APEPCCNHRHQDSSP*TSGIHYALICQLLQ Trigger: CTGTAGCAGCTGACAAATCAACGCGTAATGAATTCCGGAGGTTCATGGAGAAGAATCTTGATGCCTATGATTACAACAAGGCTCGGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 90 bp | GACCCATTCAAGATTCTGGCCAGTTCAAGATTATGCTGTCAGGTATaGTATAGCCTTACTCAAAAGGAAGAAAATAAGACATACATTGGC | + |
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Preference number: 1 (lower is better) Translates to: DPFKILASSRLCCQV*YSLTQKEENKTYIG Trigger: GCCAATGTATGTCTTATTTTCTTCCTTTTGAGTAAGGCTATATCATACCTGACAGCATAATCTTGAACTGGCCAGAATCTTGAATGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| 3UTR TCA 90 bp | AGGATACTACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATaGCATAATCACAATTTAGACTTAAATCACTTGACCCATTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RILLMASRGSSGRWE*HNHNLDLNHLTHSR Trigger: TCTTGAATGGGTCAAGTGATTTAAGTCTAAATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTAGTATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCCAGCACTAGCAACTTCCCAGAGCTCTGGCTaGCCAGGGGCTTTGGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: MRPWRDTPQLQQRPALATSQSSG*PGALAS Trigger: TGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGGA...AGTTGCTAGTGCTGGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CCA 90 bp | TTGCTGAGGAAGAGGCCCATGTGCCCCACACTGCTGCTCTTGACTTCTCTCCTTCCTCCCCTAGTGCCTTaGACCAGATTGGCCCCGCCA | + |
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Preference number: 2 (lower is better) Translates to: LLRKRPMCPTLLLLTSLLPPLVP*TRLAPP Trigger: TGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGG...AAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCTGTAGGGGTGCCCCTTaGCCTCCAAAGAACAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: PKTVLAPHTFVALSLPRFCRGAP*PPKNKD Trigger: GTCCTTGTTCTTTGGAGGCCAAGGGGCACCCCTACA...GAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CCA 90 bp | ACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCTCCTCCTCCTCCGCTTaGGCAGTACTTCAAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: THLRGPVFASIPGCPSPPSSSSA*AVLQIH Trigger: GTGAATTTGAAGTACTGCCCAAGCGGAGGAGGAGGA...GGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CAA 90 bp | CTCGGAACAATACTGTTTCTGCCTCCCCTAGTGCCTTGGACCAGATaGGCCCCGCCAGCAGGTTGCGAACATCCTTATAGAGCATGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LGTILFLPPLVPWTR*APPAGCEHPYRAWL Trigger: AAGCCATGCTCTATAAGGATGTTCGCAACCTGCTGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGCAGAAACAGTATTGTTCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CAA 90 bp | TGTGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATGAGGCCTaGGAGGGACACTCCACAACTCCAGCAGCGTCCAGCACTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CGAEREVEVVKGNEA*EGHSTTPAASSTSN Trigger: GTTGCTAGTGCTGGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CCA 90 bp | GACAAGCAGCTAGAAGCGTGTCCCAGAGCTCTGGCTGACCAGGGGCTTTGGCCTGACCAAAGTATCCAATaGGGTTTCAACCTCTTGGGT | + |
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Preference number: 2 (lower is better) Translates to: DKQLEACPRALADQGLWPDQSIQ*GFNLLG Trigger: ACCCAAGAGGTTGAAACCCCATTGGATACTTTGGTC...AGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGGACACGCTTCTAGCTGCTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CAA 90 bp | TGGCCTCATAGACCAAAGTATCCAATGGGGTTTCAACCTCTTGGGTaGGCTGTGAGAACGGCTCATCTTGAGGTTGCTGAGGAAGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: WPHRPKYPMGFQPLG*AVRTAHLEVAEEEA Trigger: GGCCTCTTCCTCAGCAACCTCAAGATGAGCCGTTCTCACAGCCAACCCAAGAGGTTGAAACCCCATTGGATACTTTGGTCTATGAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CAA 90 bp | ATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTaGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: IPKTVLAPHTFVALS*PRFLGVLHHPSSKC Trigger: ACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| 3UTR CAA 90 bp | AAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTaGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATCAAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: KLHEEEESSRSGCVL*GPRVGPGAERNQDE Trigger: TTCATCTTGATTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATCATCCTTATAGAGCATaGCTTCATTGTAACGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: WPCLCLDSWVSFTTHLPNHPYRA*LHCNAS Trigger: TGAGGCGTTACAATGAAGCCATGCTCTATAAGGATG...ATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR TCA 90 bp | TTTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGAGTGGAAGATGGGAATaGCATAATCACAATTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: FITTILPSFPFYKGYYSWSGRWE*HNHNLD Trigger: GTCTAAATTGTGATTATGTCATTCCCATCTTCCACT...CCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| 3UTR GCA 72 bp | GCTAGGGGCTCCCAACTGGGCAGCAAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTCCCGGTCACTGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: ARGSQLGSKSAL*SQSSLLPVTEG Trigger: GCCCTCAGTGACCGGGAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTTGCTGCCCAGTTGGGAGCCCCTAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 72 bp | GCAGAGTCAGGAACTGGAGGGCTAGGGGCTCCCAACTaGGCAGCAAGTCGGCGCTCTGCAGCCAGAGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: AESGTGGLGAPN*AASRRSAARAL Trigger: GAGAGCTCTGGCTGCAGAGCGCCGACTTGCTGCCCAGTTGGGAGCCCCTAGCCCTCCAGTTCCTGACTCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTGAGGAAGAGGCCCATGTGCCCCACACTGCTGCTCTTGACTTCTCTCCTTGCCTCCCCTAGTGCCTaGGACCAGATTGGCCCCGCC | + |
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Preference number: 3 (lower is better) Translates to: LLRKRPMCPTLLLLTSLLASPSA*DQIGPA Trigger: GGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGC...AAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 72 bp | GGCGCTCTGCAGCCAGAGCTCTCTTCTCCCGGTCACTaGGGGCAGCAAACCGCCGTTGTTCCTCTTGCTCTT | + |
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Preference number: 3 (lower is better) Translates to: GALQPELSSPGH*GQQTAVVPLAL Trigger: AAGAGCAAGAGGAACAACGGCGGTTTGCTGCCCTCAGTGACCGGGAGAAGAGAGCTCTGGCTGCAGAGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 72 bp | CACTCCACAACTCCAGCAGCGTCCAGCACTAGCAACTaGAGAGTCAGGAACTGGAGGGCTAGGGGCTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: HSTTPAASSTSN*RVRNWRARGSQ Trigger: TTGGGAGCCCCTAGCCCTCCAGTTCCTGACTCTGCAGTTGCTAGTGCTGGACGCTGCTGGAGTTGTGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTGCTCCCTCTGCTTCCGCTGCTGTTGCTCCCGTTGCCGTCGAGCTGCCTTCTTTCAACCTCTTGGGTaGGCTGTGAGAACGGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SCSLCFRCCCSRCRRAAFFQPLG*AVRTAH Trigger: ATGAGCCGTTCTCACAGCCAACCCAAGAGGTTGAAA...GAAGGCAGCTCGACGGCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 72 bp | GCAAACCGCCGTTGTTCCTCTTGCTCTTGTTCTTCCTaGTCCCTCTGCTTCCGCTGCTGTTGCTCCCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: ANRRCSSCSCSS*SLCFRCCCSRC Trigger: GCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGAAGAACAAGAGCAAGAGGAACAACGGCGGTTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTGCTCCCTCTGCTTCCGCTGCTGTTGCTCCCGTTGCCGTCGAGCTGCCTTCGGAATTCATTACGCGTaGATTTGTCAGCTGCTACAG | + |
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Preference number: 3 (lower is better) Translates to: SCSLCFRCCCSRCRRAAFGIHYA*ICQLLQ Trigger: CTGTAGCAGCTGACAAATCAACGCGTAATGAATTCC...GAAGGCAGCTCGACGGCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 72 bp | CACGCTGGAGCTCTCCAAAAGTGGGTCTGCGGGTGGTaGGAGGGATATCCCAAAGTCGGGGATCATCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: HAGALQKWVCGW*EGYPKVGDHPF Trigger: AAAGGGATGATCCCCGACTTTGGGATATCCCTCTCACCACCCGCAGACCCACTTTTGGAGAGCTCCAGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 72 bp | CAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTaGCTCGATTCCTGGGTGTCCTTCACCACCCATCTT | + |
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Preference number: 3 (lower is better) Translates to: QYWLHTPSWPCL*LDSWVSFTTHL Trigger: AAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| 3UTR CCA 72 bp | CTCGGAACAATACTGTTTCTGCCTCCCCTAGTGCCTTaGACCAGATTGGCCCCGCCAGCAGGTTGCGAACAT | + |
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Preference number: 3 (lower is better) Translates to: LGTILFLPPLVP*TRLAPPAGCEH Trigger: ATGTTCGCAACCTGCTGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGCAGAAACAGTATTGTTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 72 bp | CCTTGTAGCCTGCCGGGCCTCCATTTCTTGAGTCAATaGCCCTGGCACCCGAGCCTTGTTGTAATCATAGGC | + |
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Preference number: 3 (lower is better) Translates to: PCSLPGLHFLSQ*PWHPSLVVIIG Trigger: GCCTATGATTACAACAAGGCTCGGGTGCCAGGGCCATTGACTCAAGAAATGGAGGCCCGGCAGGCTACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR TCA 72 bp | GGTGCTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTaGCTGCGATGGTCTCGAAGGCAACGTGTGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GAERNQDEGLPA*LRWSRRQRVEQ Trigger: CTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTGATTTCTTTCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 72 bp | CGGCTCATCTTGAGGTTGCTGAGGAAGAGGCCCATGTaGCCCACACTGCTGCTCTTGACTTCTCTCCTTCTT | + |
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Preference number: 3 (lower is better) Translates to: RLILRLLRKRPM*PTLLLLTSLLL Trigger: AAGAAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAGCAACCTCAAGATGAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR GCA 72 bp | GACTTAACTCCAGGGTCTACCAGCCCAGTGGCTAGCTaGAGCTTTAGCACCTCAACTTCCCCAGCACGACAA | + |
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Preference number: 3 (lower is better) Translates to: DLTPGSTSPVAS*SFSTSTSPARQ Trigger: TTGTCGTGCTGGGGAAGTTGAGGTGCTAAAGCTGCAGCTAGCCACTGGGCTGGTAGACCCTGGAGTTAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CCA 72 bp | GCCCCGCCAGCAGGTTGCGAACATCCTTATAGAGCATaGCTTCATTGTAACGCCTCAAGTTGGCTCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: APPAGCEHPYRA*LHCNASSWLQQ Trigger: CTGCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGCAACCTGCTGGCGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | TACACCTGCAAGGTGGTCAGCTTATGGAGTACACGCTaGAGCTCTCCAAAAGTGGGTCTGCGGGTGGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YTCKVVSLWSTR*SSPKVGLRVVR Trigger: TCTCACCACCCGCAGACCCACTTTTGGAGAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | TCCCCGCCTGACTGCGATGGTCTCGAAGGCAACGTGTaGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPPDCDGLEGNV*SRKRSRGSERE Trigger: TTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | TGGAGCAGAAAGAGAAGTCGAGGTAGTGAAAGGGAATaGGGCCTTGGAGGGACACTCCACAACTCCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WSRKRSRGSERE*GLGGTLHNSSS Trigger: GCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTTTCACTACCTCGACTTCTCTTTCTGCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | AGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTTaGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: RRKRALGLDVSS*DPELAQVLKEI Trigger: GATTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR GCA 72 bp | CTGAAAGAAATCAAGATGAAGGTCTCCCCGCCTGACTaGGATGGTCTCGAAGGCAACGTGTGGAGCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LKEIKMKVSPPD*DGLEGNVWSRK Trigger: CTTTCTGCTCCACACGTTGCCTTCGAGACCATCGCAGTCAGGCGGGGAGACCTTCATCTTGATTTCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | GGGTCTTCATCATACACCTGCAAGGTGGTCAGCTTATaGAGTACACGCTGGAGCTCTCCAAAAGTGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSSYTCKVVSL*STRWSSPKVGL Trigger: CAGACCCACTTTTGGAGAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | AAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTaGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KFQRQYWLHTPS*PCLCLDSWVSF Trigger: GAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| 3UTR CCA 72 bp | CCATTTCTCGAGGGTCTTCATCATACACCTGCAAGGTaGTCAGCTTATGGAGTACACGCTGGAGCTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PFLEGLHHTPAR*SAYGVHAGALQ Trigger: TTGGAGAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR GCA 72 bp | AATCTGACCATTTCTCGAGGGTCTTCATCATACACCTaGAAGGTGGTCAGCTTATGGAGTACACGCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NLTISRGSSSYT*KVVSLWSTRWS Trigger: GCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAATGGTCAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | TCACTGGTTTCCAGTGTGTCTCAGGAGAGTGAAATCTaGCCATTTCTCGAGGGTCTTCATCATACACCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLVSSVSQESEI*PFLEGLHHTPA Trigger: TGCAGGTGTATGATGAAGACCCTCGAGAAATGGTCAGATTTCACTCTCCTGAGACACACTGGAAACCAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | CAACTCTACTTCGGAACCATCTTCTTCCTGAGACTCTaGACCTTGTTTGAGTGGTTCTTCATCCTGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QLYFGTIFFLRL*TLFEWFFILPK Trigger: CTTGGGCAGGATGAAGAACCACTCAAACAAGGTTCAGAGTCTCAGGAAGAAGATGGTTCCGAAGTAGAGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | ATTCTTCTCCATGAACCTCCGGAATTCATTACGCGTTaGTTTGTCAGCTGCTACAGTATAAGGTGGCCGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ILLHEPPEFITR*FVSCYSIRWPS Trigger: GCTCGGCCACCTTATACTGTAGCAGCTGACAAATCAACGCGTAATGAATTCCGGAGGTTCATGGAGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | ACTAGCTCCAACTCTACTTCGGAACCATCTTCTTCCTaGGACTCTGAACCTTGTTTGAGTGGTTCTTCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TSSNSTSEPSSS*DSEPCLSGSSS Trigger: GGATGAAGAACCACTCAAACAAGGTTCAGAGTCTCAGGAAGAAGATGGTTCCGAAGTAGAGTTGGAGCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR TCA 72 bp | CCTTGTTGTAATCATAGGCATCAAGATTCTTCTCCATaGACCTCCGGAATTCATTACGCGTTGATTTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PCCNHRHQDSSP*TSGIHYALICQ Trigger: CTGACAAATCAACGCGTAATGAATTCCGGAGGTTCATGGAGAAGAATCTTGATGCCTATGATTACAACAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| 3UTR CCA 72 bp | TTGCCCTCATTTCCATTTTACAAAGGATACTACTCATaGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LPSFPFYKGYYS*LQEVVVEDGND Trigger: GTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR TCA 90 bp | GAGAGCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTCTACCATGGGCATCCTaGAGCCCCTGGGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSRSGCVLLGPRVGPGALPWAS*SPWAVP Trigger: GGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAG...AGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTAACGGAGGCAGGGGCTaGGGCTGCACTTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STGSTHLRGPVFASIPGCNGGRG*GCTWSW Trigger: CCAGCTCCAAGTGCAGCCTCAGCCCCTGCCTCCGTT...ACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAGGAAGAGGCCCATGTGCCCCACACTGCTGCTCTTGACTTCTCTCCTTAACGGAGGCAGGGGCTaGGGCTGCACTTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRKRPMCPTLLLLTSLLNGGRG*GCTWSW Trigger: CCAGCTCCAAGTGCAGCCTCAGCCCCTGCCTCCGTT...AAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR TCA 90 bp | CTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCGGGCCTCCATTTCTTaGGTCAATGGCCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LAPHTFVALSLPRFLGVLRASIS*VNGPGT Trigger: GGTGCCAGGGCCATTGACTCAAGAAATGGAGGCCCG...AAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | AGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTCCCCTAGTGCCTTaGACCAGATTGGCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: STGSTHLRGPVFASIPGCPPLVP*TRLAPP Trigger: TGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGG...ACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCGTGTCCCAGAGCTCTaGCTGACCAGGGGCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSWPCLCLDSWVSFTTHLRVPEL*LTRGFG Trigger: GCCAAAGCCCCTGGTCAGCCAGAGCTCTGGGACACG...AAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | AGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTGTGGAGCTTCCCCGTTaGGGGACAACAGGGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: STGSTHLRGPVFASIPGCVELPR*GTTGKR Trigger: CCGTTTCCCTGTTGTCCCTCAACGGGGAAGCTCCAC...ACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | GTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCTGGGTCTGCGGGTGGTaGGAGGGATATCCCAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLAPHTFVALSLPRFLGVWVCGW*EGYPKV Trigger: GACTTTGGGATATCCCTCTCACCACCCGCAGACCCA...GACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | AGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTGCTGCGGCTGCTGCATaGAGGAGAGTAAAGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: STGSTHLRGPVFASIPGCAAAAA*RRVKPP Trigger: CGGTGGCTTTACTCTCCTGCATGCAGCAGCCGCAGC...ACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | CAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGAGCAAGTCGGCGCTCTaGAGCCAGAGCTCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QYWLHTPSWPCLCLDSWVSKSAL*SQSSLL Trigger: GAGAAGAGAGCTCTGGCTGCAGAGCGCCGACTTGCT...CACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTCGGGCTGTGCCCCGCTTaGCCCGCACAGTGTAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PCLCLDSWVSFTTHLPNVGLCPA*PAQCNG Trigger: ACCGTTACACTGTGCGGGCCAAGCGGGGCACAGCCC...GACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | GTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCCTCCCCTCATCCAGTaGCAGCAAGTCCTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: VLAPHTFVALSLPRFLGVPPLIQ*QQVLFT Trigger: AGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGG...GACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTGTAGGGGTGCCCCTTaGCCTCCAAAGAACAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QYWLHTPSWPCLCLDSWVCRGAP*PPKNKD Trigger: GTCCTTGTTCTTTGGAGGCCAAGGGGCACCCCTACA...CACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | GAGAGCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGGGGTTTCAACCTCTTaGGTTGGCTGTGAGAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: ESSRSGCVLLGPRVGPGAGVSTS*VGCENG Trigger: GCCGTTCTCACAGCCAACCCAAGAGGTTGAAACCCC...AGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTTGCAGAGTCAGGAACTaGAGGGCTAGGGGCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSWPCLCLDSWVSFTTHLCRVRN*RARGSQ Trigger: TTGGGAGCCCCTAGCCCTCCAGTTCCTGACTCTGCA...AAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| 3UTR CAA 72 bp | GCTCGGAACAATACTGTTTCTGCCTCCCCTAGTGCCTaGGACCAGATTGGCCCCGCCAGCAGGTTGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ARNNTVSASPSA*DQIGPASRLRT Trigger: TGTTCGCAACCTGCTGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGCAGAAACAGTATTGTTCCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR TCA 90 bp | GCGAACATCCTTATAGAGCATGGCTTCATTGTAACGCCTCAAGTTGGCTCCAGCCTACCATGGGCATCCTaGAGCCCCTGGGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ANILIEHGFIVTPQVGSSLPWAS*SPWAVP Trigger: GGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAG...GCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR GCA 90 bp | ACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCGAGCCCTAGAGTCCTaGACAGTAGGATCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TPSWPCLCLDSWVSFTTHRALES*TVGSAP Trigger: AGGTGCTGATCCTACTGTGCAGGACTCTAGGGCTCG...ATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | ACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATTGCTCTTGTTCTTCCTaGTCCCTCTGCTTCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPSWPCLCLDSWVSFTTHCSCSS*SLCFRC Trigger: GCAGCGGAAGCAGAGGGAGCAGGAAGAACAAGAGCA...ATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTTCCAGCACTAGCAACTaGAGAGTCAGGAACTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAPHTFVALSLPRFLGVLSSTSN*RVRNWR Trigger: CCTCCAGTTCCTGACTCTGCAGTTGCTAGTGCTGGA...AAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | AGCAAACGAACTACTAAGCCTCTTCCAGCTGCGGCTGCTGCATGCAGGAGAGTACAGGCCCCGAATGAGTaGAGCTTCCCCGTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKRTTKPLPAAAAACRRVQAPNE*SFPVEG Trigger: TCCCTCAACGGGGAAGCTCCACTCATTCGGGGCCTG...TACTCTCCTGCATGCAGCAGCCGCAGCTGGAAGAGGCTTAGTAGTTCGTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTCCAGGCCCCGAATGAGTaGAGCTTCCCCGTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCLCLDSWVSFTTHLPNVQAPNE*SFPVEG Trigger: TCCCTCAACGGGGAAGCTCCACTCATTCGGGGCCTG...GACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCCTGATCCTGAGATGCTaGAAAGATCCCCTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLRGPVFASIPGCPSPPILILRC*KDPLWS Trigger: GCTCCACAGGGGATCTTTCCAGCATCTCAGGATCAG...GATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | TTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCTGTAACGCCTCAAGTTaGCTCCAGCAGAGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FVALSLPRFLGVLHHPSSCNASS*LQQSGM Trigger: CATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACA...GGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTCCCTCTGCTTCCGCTGCTGTTGCTCCCGTTGCCGTCGAGCTGCCTTCACCACTTCTCTTCCTTaGAAAATGGCACCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCSLCFRCCCSRCRRAAFTTSLP*KMAPAK Trigger: TTTTGCTGGTGCCATTTTTCAAGGAAGAGAAGTGGT...GAAGGCAGCTCGACGGCAACGGGAGCAACAGCAGCGGAAGCAGAGGGAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR GCA 90 bp | AGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGTCTTCCAGCTGCGGCTaGTGCATGCAGGAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQYWLHTPSWPCLCLDSWSSSCG*CMQESK Trigger: TTTACTCTCCTGCATGCAGCAGCCGCAGCTGGAAGA...CCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CTGAGGAAGAGGCCCATGTGCCCCACACTGCTGCTCTTGACTTCTCTCCTTCTTCCTCCCCTCATCCAGTaGCAGCAAGTCCTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRKRPMCPTLLLLTSLLLPPLIQ*QQVLFT Trigger: AGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGG...AAGAAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR CCA 90 bp | ACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCGCACCACGTAGTATCTaGGACCTCCATTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: THLRGPVFASIPGCPSPPAPRSI*DLHSVG Trigger: ACCTACAGAATGGAGGTCCCAGATACTACGTGGTGC...GGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGGGCTGTGCCCCGCTTaGCCCGCACAGTGTAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIFQMSSFMRRKRALGLDGLCPA*PAQCNG Trigger: ACCGTTACACTGTGCGGGCCAAGCGGGGCACAGCCC...ATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCTCCTCCTCCTCCGCTTaGGCAGTACTTCAAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WLHTPSWPCLCLDSWVSFSSSSA*AVLQIH Trigger: GTGAATTTGAAGTACTGCCCAAGCGGAGGAGGAGGA...GAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | ACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTTCCCAGAGCTCTGGCTaGCCAGGGGCTTTGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTHLPNVKLHEEEESSRSSQSSG*PGALAS Trigger: TGAGGCCAAAGCCCCTGGTCAGCCAGAGCTCTGGGA...AGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | TGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCTCTCTCTGTTCCTGGTaGTTCTGGAAGATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLHTPSWPCLCLDSWVSFSLCSW*FWKIWS Trigger: TGACCAGATCTTCCAGAACCACCAGGAACAGAGAGA...GAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | ATGAGGCCTTGGAGGGACACTCCACAACTCCAGCAGCGTCCAGCACTAGCAACTGCACCACGTAGTATCTaGGACCTCCATTCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: MRPWRDTPQLQQRPALATAPRSI*DLHSVG Trigger: ACCTACAGAATGGAGGTCCCAGATACTACGTGGTGC...AGTTGCTAGTGCTGGACGCTGCTGGAGTTGTGGAGTGTCCCTCCAAGGCCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CCA 90 bp | AGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTCTCTTCTCTCACTaGTTTCCAGTGTGTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STGSTHLRGPVFASIPGCPLFSH*FPVCLR Trigger: CCTGAGACACACTGGAAACCAGTGAGAGAAGAGAGG...ACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| 3UTR CAA 72 bp | ATACTGTTTCTGCCTCCCCTAGTGCCTTGGACCAGATaGGCCCCGCCAGCAGGTTGCGAACATCCTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILFLPPLVPWTR*APPAGCEHPYR Trigger: TCTATAAGGATGTTCGCAACCTGCTGGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGCAGAAACAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| 3UTR CAA 72 bp | GAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTaGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EEEESSRSGCVL*GPRVGPGAERN Trigger: ATTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTTCCCCTGTGGAGCTTTaGTGTTCAAAGTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWPCLCLDSWVSFTTHLSPVEL*CSKSEA Trigger: TGCTTCAGACTTTGAACAGCAAAGCTCCACAGGGGA...AAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | TTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATCGCCGTTGTTCCTCTTaGTCTTGTTCTTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQRQYWLHTPSWPCLCLDRRCSS*SCSSCS Trigger: GGAGCAGGAAGAACAAGAGCAAGAGGAACAACGGCG...ATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCTGTTCTCTCTGTTCCTaGTGGTTCTGGAAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRGPVFASIPGCPSPPIFCSLCS*WFWKIW Trigger: CCAGATCTTCCAGAACCACCAGGAACAGAGAGAACA...GAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTCAATTCTGCCTTTTCTaGGGGAATCTGGTGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALSLPRFLGVLHHPSSKCQFCLF*GNLVRA Trigger: GGCCCTCACCAGATTCCCCCAGAAAAGGCAGAATTG...ACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | TTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCCATACACCTGCAAGGTaGTCAGCTTATGGAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: FVALSLPRFLGVLHHPSSHTPAR*SAYGVH Trigger: GTGTACTCCATAAGCTGACCACCTTGCAGGTGTATG...GGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTTGCTACAGTATAAGGTaGCCGAGCCCTAGAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALSLPRFLGVLHHPSSKCCYSIR*PSPRVL Trigger: CAGGACTCTAGGGCTCGGCCACCTTATACTGTAGCA...ACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCTAGGGGCTCCCAACTaGGCAGCAAGTCGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKIPKTVLAPHTFVALSLLGAPN*AASRRS Trigger: AGAGCGCCGACTTGCTGCCCAGTTGGGAGCCCCTAG...CAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAATTTTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATAAGGGAATGAGGCCTTaGAGGGACACTCCACAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WPCLCLDSWVSFTTHLPNKGMRP*RDTPQL Trigger: GAGTTGTGGAGTGTCCCTCCAAGGCCTCATTCCCTT...ATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| 3UTR CAA 72 bp | GCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTaGGCCCAGGTGCTGAAAGAAATCAAGATGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGLDVSSWDPE*AQVLKEIKMKV Trigger: GACCTTCATCTTGATTTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR TCA 90 bp | TTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCTTCTTCCTGAGACTCTaGACCTTGTTTGAGTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVALSLPRFLGVLHHPSSFFLRL*TLFEWF Trigger: GAACCACTCAAACAAGGTTCAGAGTCTCAGGAAGAA...GGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR GCA 90 bp | CTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAAGTGGTTCTTCATCCTaGCCAAGGGGCTTATTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLDVSSWDPELAQVLKESGSSS*PRGLFA Trigger: TGCAAATAAGCCCCTTGGGCAGGATGAAGAACCACT...TTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR GCA 90 bp | TCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTTCCAGCTGCGGCTGCTaGATGCAGGAGAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPPIFQMSSFMRRKRALGSSCGC*MQESKA Trigger: GGCTTTACTCTCCTGCATGCAGCAGCCGCAGCTGGA...ACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | CCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCTGTTCTCTCTGTTCCTaGTGGTTCTGGAAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKTVLAPHTFVALSLPRFCSLCS*WFWKIW Trigger: CCAGATCTTCCAGAACCACCAGGAACAGAGAGAACA...GAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | TGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATCTCGAAGGCAACGTGTaGAGCAGAAAGAGAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WPCLCLDSWVSFTTHLPNLEGNV*SRKRSR Trigger: TCGACTTCTCTTTCTGCTCCACACGTTGCCTTCGAG...ATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR TCA 90 bp | AGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGACCACTTCTCTTCCTTaGAAAATGGCACCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RQYWLHTPSWPCLCLDSWTTSLP*KMAPAK Trigger: TTTTGCTGGTGCCATTTTTCAAGGAAGAGAAGTGGT...CCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR TCA 90 bp | AGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGCAAGATTCTTCTCCATaGACCTCCGGAATTCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: RQYWLHTPSWPCLCLDSWQDSSP*TSGIHY Trigger: GTAATGAATTCCGGAGGTTCATGGAGAAGAATCTTG...CCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | AGCAAACGAACTACTAAGCCTCTTCCAGCTGCGGCTGCTGCATGCAGGAGAGTATCTCTCTGTTCCTGGTaGTTCTGGAAGATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKRTTKPLPAAAAACRRVSLCSW*FWKIWS Trigger: TGACCAGATCTTCCAGAACCACCAGGAACAGAGAGA...TACTCTCCTGCATGCAGCAGCCGCAGCTGGAAGAGGCTTAGTAGTTCGTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CCA 90 bp | CTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCTCTTCCTTGAAAAATaGCACCAGCAAAATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRGPVFASIPGCPSPPIFLFLEK*HQQNVQ Trigger: CTGGACATTTTGCTGGTGCCATTTTTCAAGGAAGAG...GAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | TCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCACATCCTTATAGAGCATaGCTTCATTGTAACGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWPCLCLDSWVSFTTHLPHPYRA*LHCNAS Trigger: TGAGGCGTTACAATGAAGCCATGCTCTATAAGGATG...TGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | CCTTCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTACCAGCCCAGTaGCTAGCTGCAGCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSPPIFQMSSFMRRKRALGLPAQ*LAAALA Trigger: TGCTAAAGCTGCAGCTAGCCACTGGGCTGGTAGACC...TAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | GATCAGCACCTGCTTCCAACAGCAAACGAACTACTAAGCCTCTTCCAGCTGCGGTGGAAAGATCCCCTGTaGAGCTTTGCTGTTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DQHLLPTANELLSLFQLRWKDPL*SFAVQS Trigger: ACTTTGAACAGCAAAGCTCCACAGGGGATCTTTCCA...CCGCAGCTGGAAGAGGCTTAGTAGTTCGTTTGCTGTTGGAAGCAGGTGCTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CCA 90 bp | TTCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGCTGATCCTGAGATGCTaGAAAGATCCCCTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTTHLPNVKLHEEEESSRLILRC*KDPLWS Trigger: GCTCCACAGGGGATCTTTCCAGCATCTCAGGATCAG...CCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | CTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAACTCTTCCTTGAAAAATaGCACCAGCAAAATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLDVSSWDPELAQVLKELFLEK*HQQNVQ Trigger: CTGGACATTTTGCTGGTGCCATTTTTCAAGGAAGAG...TTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| 3UTR CAA 72 bp | AGACCAAAGTATCCAATGGGGTTTCAACCTCTTGGGTaGGCTGTGAGAACGGCTCATCTTGAGGTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPKYPMGFQPLG*AVRTAHLEVAE Trigger: CTCAGCAACCTCAAGATGAGCCGTTCTCACAGCCAACCCAAGAGGTTGAAACCCCATTGGATACTTTGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CCA 90 bp | TGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATCAATTCTGCCTTTTCTaGGGGAATCTAGATGACACA | + |
|
Preference number: 4 (lower is better) Translates to: WPCLCLDSWVSFTTHLPNQFCLF*GNLDDT Trigger: TGTGTCATCTAGATTCCCCCAGAAAAGGCAGAATTG...ATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR TCA 90 bp | TTTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGAACGGAGGCAGGGGCTaGGGCTGCACTTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FITTILPSFPFYKGYYSWNGGRG*GCTWSW Trigger: CCAGCTCCAAGTGCAGCCTCAGCCCCTGCCTCCGTT...CCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR TCA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCGTGGAGCTTCCCCGTTaGGGGACAACAGGGAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFVELPR*GTTGKR Trigger: CCGTTTCCCTGTTGTCCCTCAACGGGGAAGCTCCAC...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR GCA 90 bp | ACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTAGTAGGATCAGCACCTaGTTCCAACAGCAAACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTHLPNVKLHEEEESSRSSRIST*FQQQTN Trigger: GTTCGTTTGCTGTTGGAAGCAGGTGCTGATCCTACT...AGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CCA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCCAGGCCCCGAATGAGTaGAGCTTCCCCGTTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFQAPNE*SFPVEG Trigger: TCCCTCAACGGGGAAGCTCCACTCATTCGGGGCCTG...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR TCA 90 bp | GCAGGTTGCGAACATCCTTATAGAGCATGGCTTCATTGTAACGCCTCAAGTTGGCTGGGGGAATCTAGATaGCACATCAACAAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGCEHPYRAWLHCNASSWLGESR*HINKHS Trigger: GGAATGTTTGTTGATGTGTCATCTAGATTCCCCCAG...CCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGCAACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR GCA 90 bp | ATTTCTCGAGGGTCTTCATCATACACCTGCAAGGTGGTCAGCTTATGGAGTACATCCCCTGTGGAGCTTTaGTGTTCAAAGTCTGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ISRGSSSYTCKVVSLWSTSPVEL*CSKSEA Trigger: TGCTTCAGACTTTGAACAGCAAAGCTCCACAGGGGA...TGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CCA 90 bp | CCTTCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTATGGAAAGATCCCCTGTaGAGCTTTGCTGTTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPIFQMSSFMRRKRALWKDPL*SFAVQS Trigger: ACTTTGAACAGCAAAGCTCCACAGGGGATCTTTCCA...TAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | CAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTGACCAAAGTATCCAATaGGGTTTCAACCTCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QMSSFMRRKRALGLDVSSDQSIQ*GFNLLG Trigger: ACCCAAGAGGTTGAAACCCCATTGGATACTTTGGTC...AGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR TCA 90 bp | TACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGACATAATCACAATTCTGTTACTTGCCTGGTaGGGGCCTAGGACACAACGA | + |
|
Preference number: 4 (lower is better) Translates to: YSWLQEVVVEDGNDIITILLLAW*GPRTQR Trigger: TCGTTGTGTCCTAGGCCCTCACCAGGCAAGTAACAG...AATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR TCA 90 bp | ATTATGATTAAAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGACTCTGAACCTTGTTTaGGTGGTTCTTCATCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IMIKIPKTVLAPHTFVALTLNLV*VVLHPA Trigger: GGCAGGATGAAGAACCACTCAAACAAGGTTCAGAGT...CAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAATTTTAATCATAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
||
| CDS-3UTR CCA 90 bp | ATTTCTCGAGGGTCTTCATCATACACCTGCAAGGTGGTCAGCTTATGGAGTACATGGTTCTGGAAGATCTaGTCACAGGCTGAACAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISRGSSSYTCKVVSLWSTWFWKI*SQAEQN Trigger: ATTTTGTTCAGCCTGTGACCAGATCTTCCAGAACCA...TGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGACCCTCGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
||
| CDS-3UTR CCA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCCTGATCCTGAGATGCTaGAAAGATCCCCTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFLILRC*KDPLWS Trigger: GCTCCACAGGGGATCTTTCCAGCATCTCAGGATCAG...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCCTCCCCTCATCCAGTaGCAGCAAGTCCTCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FITTILPSFPFYKGYYSWPPLIQ*QQVLFT Trigger: AGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGG...CCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR CCA 90 bp | TACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGACATAATCACAATTTCTCTCTGTTCCTGGTaGTTCTGGAAGATCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSWLQEVVVEDGNDIITISLCSW*FWKIWS Trigger: TGACCAGATCTTCCAGAACCACCAGGAACAGAGAGA...AATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR CCA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCTGTTCTCTCTGTTCCTaGTGGTTCTGGAAGATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFCSLCS*WFWKIW Trigger: CCAGATCTTCCAGAACCACCAGGAACAGAGAGAACA...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
||
| CDS-3UTR CCA 90 bp | TACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGACATAATCACAATTTGGAAAGATCCCCTGTaGAGCTTTGCTGTTCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSWLQEVVVEDGNDIITIWKDPL*SFAVQS Trigger: ACTTTGAACAGCAAAGCTCCACAGGGGATCTTTCCA...AATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR GCA 90 bp | TTTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGTCCCCTGTGGAGCTTTaGTGTTCAAAGTCTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: FITTILPSFPFYKGYYSWSPVEL*CSKSEA Trigger: TGCTTCAGACTTTGAACAGCAAAGCTCCACAGGGGA...CCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CCA 90 bp | TACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGACATAATCACAATTTGGTTCTGGAAGATCTaGTCACAGGCTGAACAAAAT | + |
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Preference number: 4 (lower is better) Translates to: YSWLQEVVVEDGNDIITIWFWKI*SQAEQN Trigger: ATTTTGTTCAGCCTGTGACCAGATCTTCCAGAACCA...AATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | CACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCGCCTCCCCTAGTGCCTaGGACCAGATTGGCCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: HLRGPVFASIPGCPSPPIASPSA*DQIGPA Trigger: GGCGGGGCCAATCTGGTCCAAGGCACTAGGGGAGGC...GATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS GCA 90 bp | CAGAGCGGGATGCCCTACCATGGGCATCCTGAAGCCCCTGGGCTGTaGCCCGCTTGGCCCGCACAGTGTAACGGTGAAAGGTTTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: QSGMPYHGHPEAPGL*PAWPAQCNGERFCV Trigger: CACACAAAACCTTTCACCGTTACACTGTGCGGGCCAAGCGGGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAGGGCATCCCGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS GCA 90 bp | CATGGCTTCATTGTAACGCCTCAAGTTGGCTCCAGCAGAGCGGGATaGCCTACCATGGGCATCCTGAAGCCCCTGGGCTGTGCCCCGCTT | + |
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Preference number: 5 (lower is better) Translates to: HGFIVTPQVGSSRAG*PTMGILKPLGCAPL Trigger: AAGCGGGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAGGGCATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | CTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGAAAGAAGGGCTGAGGCTGCACTaGGAGCTGGCGACGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGLDVSSWDPELAQVLKEGLRLH*ELATWL Trigger: CAGCCACGTCGCCAGCTCCAAGTGCAGCCTCAGCCC...TTCTTTCAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TTGCTGAGGAAGAGGCCCATGTGCCCCACACTGCTGCTCTTGACTTCTCTCCTTAGCCTCCCCAGGAGCTaGGCTCACCAGGCTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LLRKRPMCPTLLLLTSLLSLPRS*AHQAQA Trigger: GGCCTGAGCCTGGTGAGCCAAGCTCCTGGGGAGGCT...AAGGAGAGAAGTCAAGAGCAGCAGTGTGGGGCACATGGGCCTCTTCCTCAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CAA 90 bp | GAGAGCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTCCGGGCCTCCATTTCTaGAGTCAATGGCCCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ESSRSGCVLLGPRVGPGAPGLHF*SQWPWH Trigger: GTGCCAGGGCCATTGACTCAAGAAATGGAGGCCCGG...AGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | CAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGGCCCAAGGGGCTTATTaGCATCACTGGGGACCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QYWLHTPSWPCLCLDSWVAQGAY*HHWGPL Trigger: CAAAGGTCCCCAGTGATGCAAATAAGCCCCTTGGGC...CACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | CAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTGGGCTGAGGCTGCACTaGGAGCTGGCGACGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QMSSFMRRKRALGLDVSSGLRLH*ELATWL Trigger: CAGCCACGTCGCCAGCTCCAAGTGCAGCCTCAGCCC...AGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTAGCCTCCCCAGGAGCTaGGCTCACCAGGCTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SPPIFQMSSFMRRKRALGSLPRS*AHQAQA Trigger: GGCCTGAGCCTGGTGAGCCAAGCTCCTGGGGAGGCT...ACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS GCA 90 bp | CGGATTCAGCCCTCCCCTCATCCAGTGGCAGCAAGTCCTCTTCACTaGTGGAGTCTGTGTCATCTGATCCTGAGATGCTGGAAAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: RIQPSPHPVAASPLH*WSLCHLILRCWKDP Trigger: GGGATCTTTCCAGCATCTCAGGATCAGATGACACAGACTCCAGCAGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGGGCTGAATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127625.3 ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | AGAGCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTGTTGTTCCTCTTGCTCTaGTTCTTCCTGCTCCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RALGLDVSSWDPELAQVLLFLLL*FFLLPL Trigger: CAGAGGGAGCAGGAAGAACAAGAGCAAGAGGAACAA...CAGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS CCA 90 bp | ATTCAGCCCTCCCCTCATCCAGTGGCAGCAAGTCCTCTTCACTGCTaGAGTCTGTGTCATCTGATCCTGAGATGCTGGAAAGATCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: IQPSPHPVAASPLHC*SLCHLILRCWKDPL Trigger: CAGGGGATCTTTCCAGCATCTCAGGATCAGATGACACAGACTCCAGCAGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGGGCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127625.3 ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS CCA 90 bp | TGCGAACATCCTTATAGAGCATGGCTTCATTGTAACGCCTCAAGTTaGCTCCAGCAGAGCGGGATGCCCTACCATGGGCATCCTGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: CEHPYRAWLHCNASS*LQQSGMPYHGHPEA Trigger: GGCTTCAGGATGCCCATGGTAGGGCATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGGATGTTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | GTCTTCATCATACACCTGCAAGGTGGTCAGCTTATGGAGTACACGCTGGAGCTCAGTGGAGCTTCCCCGTaGAGGGACAACAGGGAAACG | + |
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Preference number: 5 (lower is better) Translates to: VFIIHLQGGQLMEYTLELSGASP*RDNRET Trigger: CGTTTCCCTGTTGTCCCTCAACGGGGAAGCTCCACT...GAGCTCCAGCGTGTACTCCATAAGCTGACCACCTTGCAGGTGTATGATGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CAA 90 bp | ACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTGCAGACAGGAGAGGCTaGTTCTTGAGACGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: TGSTHLRGPVFASIPGCPADRRG*FLRRCF Trigger: AAAACAACGTCTCAAGAACAAGCCTCTCCTGTCTGC...AGGACACCCAGGAATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | GAGAGCTCTAGGTCTGGATGTGTCCTCTTGGGACCCAGAGTTGGCCCAGGTGCTCACCACTTCTCTTCCTaGAAAAATGGCACCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: ESSRSGCVLLGPRVGPGAHHFSS*KNGTSK Trigger: TTTGCTGGTGCCATTTTTCAAGGAAGAGAAGTGGTG...AGCACCTGGGCCAACTCTGGGTCCCAAGAGGACACATCCAGACCTAGAGCTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGCCTCGATCTCCTCCTCCTCCGCTaGGGCAGTACTTCAAATTCA | + |
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Preference number: 5 (lower is better) Translates to: FQRQYWLHTPSWPCLCLDLLLLR*GSTSNS Trigger: TGAATTTGAAGTACTGCCCAAGCGGAGGAGGAGGAG...ATCGAGGCAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCGGGCTGAGGCTGCACTaGGAGCTGGCGACGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFGLRLH*ELATWL Trigger: CAGCCACGTCGCCAGCTCCAAGTGCAGCCTCAGCCC...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | ACTCCAGGGTCTACCAGCCCAGTGGCTAGCTGCAGCTTTAGCACCTCAACTTCCAGGAGAGGCTTGTTCTaGAGACGTTGTTTTAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: TPGSTSPVASCSFSTSTSRRGLF*RRCFKL Trigger: TAACTTAAAACAACGTCTCAAGAACAAGCCTCTCCT...GGAAGTTGAGGTGCTAAAGCTGCAGCTAGCCACTGGGCTGGTAGACCCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145459.9 |
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| CDS-3UTR CAA 90 bp | GCCCTGTCTTTGCCTCGATTCCTGGGTGTCCTTCACCACCCATCTTCCAAATGTGGAATTCATTACGCGTaGATTTGTCAGCTGCTACAG | + |
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Preference number: 5 (lower is better) Translates to: ALSLPRFLGVLHHPSSKCGIHYA*ICQLLQ Trigger: CTGTAGCAGCTGACAAATCAACGCGTAATGAATTCC...ACATTTGGAAGATGGGTGGTGAAGGACACCCAGGAATCGAGGCAAAGACAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TTTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGAGCCTCCCCAGGAGCTaGGCTCACCAGGCTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: FITTILPSFPFYKGYYSWSLPRS*AHQAQA Trigger: GGCCTGAGCCTGGTGAGCCAAGCTCCTGGGGAGGCT...CCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | ATTATGATTAAAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGCCGCCGTTGTTCCTCTaGCTCTTGTTCTTCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: IMIKIPKTVLAPHTFVALPPLFL*LLFFLL Trigger: GAGCAGGAAGAACAAGAGCAAGAGGAACAACGGCGG...CAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAATTTTAATCATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | CAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATGTGTCCTCTGCAGACAGGAGAGGCTaGTTCTTGAGACGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: QMSSFMRRKRALGLDVSSADRRG*FLRRCF Trigger: AAAACAACGTCTCAAGAACAAGCCTCTCCTGTCTGC...AGAGGACACATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | ATTAAAATTCCAAAGACAGTACTGGCTCCACACACCTTCGTGGCCCTGTCTTTGTTTCAACCTCTTGGGTaGGCTGTGAGAACGGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: IKIPKTVLAPHTFVALSLFQPLG*AVRTAH Trigger: ATGAGCCGTTCTCACAGCCAACCCAAGAGGTTGAAA...CAAAGACAGGGCCACGAAGGTGTGTGGAGCCAGTACTGTCTTTGGAATTTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TACTCATGGCTTCAAGAGGTAGTAGTGGAAGATGGGAATGACATAATCACAATTAGTGGAGCTTCCCCGTaGAGGGACAACAGGGAAACG | + |
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Preference number: 5 (lower is better) Translates to: YSWLQEVVVEDGNDIITISGASP*RDNRET Trigger: CGTTTCCCTGTTGTCCCTCAACGGGGAAGCTCCACT...AATTGTGATTATGTCATTCCCATCTTCCACTACTACCTCTTGAAGCCATGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | CCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAGGTCTGGATCACCACTTCTCTTCCTaGAAAAATGGCACCAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: PIFQMSSFMRRKRALGLDHHFSS*KNGTSK Trigger: TTTGCTGGTGCCATTTTTCAAGGAAGAGAAGTGGTG...ATCCAGACCTAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | CCTTCACCACCCATCTTCCAAATGTCAAGCTTCATGAGGAGGAAGAGAGCTCTAAGGAGAGGCTTGTTCTaGAGACGTTGTTTTAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: PSPPIFQMSSFMRRKRALRRGLF*RRCFKL Trigger: TAACTTAAAACAACGTCTCAAGAACAAGCCTCTCCT...TAGAGCTCTCTTCCTCCTCATGAAGCTTGACATTTGGAAGATGGGTGGTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS-3UTR CAA 90 bp | TTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCTTCAATCTGGACTGTTACTaGCCTGGTGAGGGCCTAGGA | + |
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Preference number: 5 (lower is better) Translates to: LQPSCPHFHFTKDTTHGFNLDCY*PGEGLG Trigger: TCCTAGGCCCTCACCAGGCAAGTAACAGTCCAGATT...GAAGCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | TTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCGCAGACAGGAGAGGCTaGTTCTTGAGACGTTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: LLQPSCPHFHFTKDTTHGADRRG*FLRRCF Trigger: AAAACAACGTCTCAAGAACAAGCCTCTCCTGTCTGC...GCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS-3UTR CAA 90 bp | TTATTACAACCATCTTGCCCTCATTTCCATTTTACAAAGGATACTACTCATGGCAGGAGAGGCTTGTTCTaGAGACGTTGTTTTAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: LLQPSCPHFHFTKDTTHGRRGLF*RRCFKL Trigger: TAACTTAAAACAACGTCTCAAGAACAAGCCTCTCCT...GCCATGAGTAGTATCCTTTGTAAAATGGAAATGAGGGCAAGATGGTTGTAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127625.3 |
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| CDS TCA 72 bp | GCTCCAGCAGAGCGGGATGCCCTACCATGGGCATCCTaGAGCCCCTGGGCTGTGCCCCGCTTGGCCCGCACA | + |
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Preference number: 6 (lower is better) Translates to: APAERDALPWAS*SPWAVPRLART Trigger: TGTGCGGGCCAAGCGGGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAGGGCATCCCGCTCTGCTGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS GCA 72 bp | ATGCCCTACCATGGGCATCCTGAAGCCCCTGGGCTGTaGCCCGCTTGGCCCGCACAGTGTAACGGTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: MPYHGHPEAPGL*PAWPAQCNGER Trigger: CCTTTCACCGTTACACTGTGCGGGCCAAGCGGGGCACAGCCCAGGGGCTTCAGGATGCCCATGGTAGGGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS CCA 72 bp | AGGAGCTTGGCTCACCAGGCTCAGGCCCCGAATGAGTaGAGCTTCCCCGTTGAGGGACAACAGGGAAACGGA | + |
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Preference number: 6 (lower is better) Translates to: RSLAHQAQAPNE*SFPVEGQQGNG Trigger: TCCGTTTCCCTGTTGTCCCTCAACGGGGAAGCTCCACTCATTCGGGGCCTGAGCCTGGTGAGCCAAGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127625.3 ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS GCA 72 bp | ATTGTAACGCCTCAAGTTGGCTCCAGCAGAGCGGGATaGCCTACCATGGGCATCCTGAAGCCCCTGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: IVTPQVGSSRAG*PTMGILKPLGC Trigger: ACAGCCCAGGGGCTTCAGGATGCCCATGGTAGGGCATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS CCA 72 bp | AGGCAGGGGCTGAGGCTGCACTTGGAGCTGGCGACGTaGCTGAAGAAGAAACGGAGGGCAGAAACAACTCTC | + |
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Preference number: 6 (lower is better) Translates to: RQGLRLHLELAT*LKKKRRAETTL Trigger: GAGAGTTGTTTCTGCCCTCCGTTTCTTCTTCAGCCACGTCGCCAGCTCCAAGTGCAGCCTCAGCCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127625.3 ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS GCA 72 bp | CCCTCCCCTCATCCAGTGGCAGCAAGTCCTCTTCACTaGTGGAGTCTGTGTCATCTGATCCTGAGATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSPHPVAASPLH*WSLCHLILRCW Trigger: CCAGCATCTCAGGATCAGATGACACAGACTCCAGCAGTGAAGAGGACTTGCTGCCACTGGATGAGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127625.3 ENSMUST00000145459.9 ENSMUST00000152233.9 |
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| CDS CCA 72 bp | CCTTATAGAGCATGGCTTCATTGTAACGCCTCAAGTTaGCTCCAGCAGAGCGGGATGCCCTACCATGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PYRAWLHCNASS*LQQSGMPYHGH Trigger: ATGCCCATGGTAGGGCATCCCGCTCTGCTGGAGCCAACTTGAGGCGTTACAATGAAGCCATGCTCTATAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152233.9 |
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| CDS TCA 72 bp | GAAAAATGGCACCAGCAAAATGTCCAGCCGCAGCCATaGGCACCACGTAGTATCTGGGACCTCCATTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: EKWHQQNVQPQP*APRSIWDLHSV Trigger: TACAGAATGGAGGTCCCAGATACTACGTGGTGCTCATGGCTGCGGCTGGACATTTTGCTGGTGCCATTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000145459.9 ENSMUST00000152233.9 |
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