Pregenerated sensors for ANKUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074591Ensembl transcript IDs: ENSMUST00000099091.4, ENSMUST00000197088.5, ENSMUST00000200665.2, ENSMUST00000238789.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGCATTCTCGCGTGGAGTCCTCCCACTGTGCTCTGAGAACGATGTaGAGAGCGACCTTAGCAAACAGTCCGCCCTGGGCGGAGGGCAGT | + |
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Preference number: 1 (lower is better) Translates to: WHSRVESSHCALRTM*RATLANSPPWAEGS Trigger: ACTGCCCTCCGCCCAGGGCGGACTGTTTGCTAAGGTCGCTCTTCACATCGTTCTCAGAGCACAGTGGGAGGACTCCACGCGAGAATGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR GCA 90 bp | AATCGGGCAGTTAGAGACATCTGTGTGAAGGGCTTCGTGGCACCATaGTCGATAAGGGTGAACCCCAACTGCCTCATGGGGCTGCACCCC | + |
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Preference number: 1 (lower is better) Translates to: NRAVRDICVKGFVAP*SIRVNPNCLMGLHP Trigger: GGGGTGCAGCCCCATGAGGCAGTTGGGGTTCACCCTTATCGAGCATGGTGCCACGAAGCCCTTCACACAGATGTCTCTAACTGCCCGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR GCA 90 bp | CTTGGGCTTGGTGAAACCATCAACCATCACGGTGTCTCCGACTTTTaGCCCAGAGACCCTCCCTCTGCCAAGCTGGCTTTTATGGCACCT | + |
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Preference number: 1 (lower is better) Translates to: LGLGETINHHGVSDF*PRDPPSAKLAFMAP Trigger: AGGTGCCATAAAAGCCAGCTTGGCAGAGGGAGGGTCTCTGGGGCAAAAGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR TCA 90 bp | TGCACCCCCTGCTTCAGAGCCCATTCAGTGAGCTCAGTGTGTCCGTaGAAAGCAGCGATGTACAGGGCTACCCTTTTCTGGTACTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: CTPCFRAHSVSSVCP*KAAMYRATLFWYLR Trigger: CCTCAAGTACCAGAAAAGGGTAGCCCTGTACATCGCTGCTTTTCACGGACACACTGAGCTCACTGAATGGGCTCTGAAGCAGGGGGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR TCA 90 bp | TGTCTTCAGTCTTGTACCAACTCTTGGAGGTCATCTTGGGCTTGGTaGAACCATCAACCATCACGGTGTCTCCGACTTTTGCCCCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: CLQSCTNSWRSSWAW*NHQPSRCLRLLPQR Trigger: TCTCTGGGGCAAAAGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR GCA 90 bp | CGGAGCTACTGCTGGCTCCTACCCTTTAGAAAAGCGTGGTTAAATTaGCCACAAGAGGGCGCTGTTCTAAAACACCGTATCACAAACAAT | + |
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Preference number: 1 (lower is better) Translates to: RSYCWLLPFRKAWLN*PQEGAVLKHRITNN Trigger: ATTGTTTGTGATACGGTGTTTTAGAACAGCGCCCTCTTGTGGGCAATTTAACCACGCTTTTCTAAAGGGTAGGAGCCAGCAGTAGCTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR CCA 90 bp | TCTCTATTCAAACAGGGCTGCCGTGACTTTTCAAAGCACAGTTTCTaGATAGTTTTCACACTTTGCCGGACCTCCTTTGACAGTCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: SLFKQGCRDFSKHSF*IVFTLCRTSFDSQV Trigger: AACCTGACTGTCAAAGGAGGTCCGGCAAAGTGTGAAAACTATCCAGAAACTGTGCTTTGAAAAGTCACGGCAGCCCTGTTTGAATAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR GCA 90 bp | TCTTTCTTTCTTTCTTTCTTTCTTTTTCCTTACCGCCTATCGGAATaGAAACCTGTAGTTCTCGACTCTTCTTTACCGGTCTCAGACACT | + |
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Preference number: 1 (lower is better) Translates to: SFFLSFFLFPYRLSE*KPVVLDSSLPVSDT Trigger: AGTGTCTGAGACCGGTAAAGAAGAGTCGAGAACTACAGGTTTGCATTCCGATAGGCGGTAAGGAAAAAGAAAGAAAGAAAGAAAGAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR TCA 90 bp | AGGAGAGCTTTTTATTTGGATCGTAGCAAACACATTCAAACAGAATaGGATTCATGCCAGAGAAACACAGAGAGAAGGCAGTTTGGTATC | + |
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Preference number: 1 (lower is better) Translates to: RRAFYLDRSKHIQTE*DSCQRNTERRQFGI Trigger: GATACCAAACTGCCTTCTCTCTGTGTTTCTCTGGCATGAATCTCATTCTGTTTGAATGTGTTTGCTACGATCCAAATAAAAAGCTCTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAGCTGGCTTTTATGGCACCTATGACTCTGAGCTCGGAGAATCCATTGTTTGGGGCTGCACCCCCTaGTTCAGAGCCCATTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: CQAGFYGTYDSELGESIVWGCTP*FRAHSV Trigger: CACTGAATGGGCTCTGAAGCAGGGGGTGCAGCCCCA...AACAATGGATTCTCCGAGCTCAGAGTCATAGGTGCCATAAAAGCCAGCTTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCATCCCAGACATCCAGACGAAGTGTTGTGCAGGGAAGCCGCATCTCAGAGATTGGCATCATCTCCTaGGTCACGGCATTGAACACA | + |
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Preference number: 2 (lower is better) Translates to: HPSQTSRRSVVQGSRISEIGIIS*VTALNT Trigger: TGTGTTCAATGCCGTGACCCAGGAGATGATGCCAAT...CTCTGAGATGCGGCTTCCCTGCACAACACTTCGTCTGGATGTCTGGGATGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CAA 90 bp | CTCTGGGCAGTTTGCCAGCTCTTGTCTTCAGTCTTGTACCAACTCTaGGAGGTCATCTTGGGCTTGGTGAAACCATCAACCATCACGGTG | + |
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Preference number: 2 (lower is better) Translates to: LWAVCQLLSSVLYQL*EVILGLVKPSTITV Trigger: CACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACAAGAGCTGGCAAACTGCCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAAGCTGGCTTTTATGGCACCTATGACTCTGAGCTCGGAGAATCCATTGTTCCAGACGAAGTGTTGTaGAGGGAAGCCGCATCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CQAGFYGTYDSELGESIVPDEVL*REAASQ Trigger: CTGAGATGCGGCTTCCCTGCACAACACTTCGTCTGG...AACAATGGATTCTCCGAGCTCAGAGTCATAGGTGCCATAAAAGCCAGCTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CAA 90 bp | CTCTTGTCTTCAGTCTTGTACCAACTCTTGGAGGTCATCTTGGGCTaGGTGAAACCATCAACCATCACGGTGTCTCCGACTTTTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: LLSSVLYQLLEVILG*VKPSTITVSPTFAP Trigger: TGGGGCAAAAGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGTAAATACAACACACAGTCTTTATGTTGGTGTTTCGATGCGATGGCCAGGGTCCTGCCGCGTTCTTaGATTCCAGGCACAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: LSKYNTQSLCWCFDAMARVLPRS*IPGTGH Trigger: GTGTCCTGTGCCTGGAATGCAAGAACGCGGCAGGAC...CCTGGCCATCGCATCGAAACACCAACATAAAGACTGTGTGTTGTATTTACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CAA 90 bp | TGCCAGCTCTTGTCTTCAGTCTTGTACCAACTCTTGGAGGTCATCTaGGGCTTGGTGAAACCATCAACCATCACGGTGTCTCCGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: CQLLSSVLYQLLEVI*GLVKPSTITVSPTF Trigger: AAAAGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACAAGAGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CAA 90 bp | GGTGGTAGTTTACTCTGGGCAGTTTGCCAGCTCTTGTCTTCAGTCTaGTACCAACTCTTGGAGGTCATCTTGGGCTTGGTGAAACCATCA | + |
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Preference number: 2 (lower is better) Translates to: GGSLLWAVCQLLSSV*YQLLEVILGLVKPS Trigger: TGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAAACTACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCACGTCTACTAAGGACGGGAATGTGAAGATTTGTTTTCTGGTGTCTCGCCCTGGGTCACGGCATTaGACACATAGAGAGTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: LFTSTKDGNVKICFLVSRPGSRH*THREWV Trigger: AACCCACTCTCTATGTGTTCAATGCCGTGACCCAGG...GCGAGACACCAGAAAACAAATCTTCACATTCCCGTCCTTAGTAGACGTGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCCAGACGAAGTGTTGTGCAGGGAAGCCGCATCTCAGAGTTACCAGCATTCCATGTTCTCCATTATTaGCATCATCTCCTGGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: TSRRSVVQGSRISELPAFHVLHY*HHLLGH Trigger: GTGACCCAGGAGATGATGCCAATAATGGAGAACATG...GAATGCTGGTAACTCTGAGATGCGGCTTCCCTGCACAACACTTCGTCTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR CCA 90 bp | AGCGTGGTTAAATTGCCCACAAGAGGGCGCTGTTCTAAAACACCGTATCACAAATGTGTGCAAAGGATCTaGGTGGAGGTAAAGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SVVKLPTRGRCSKTPYHKCVQRI*VEVKTG Trigger: GCCTGTCTTTACCTCCACCCAGATCCTTTGCACACA...TTTGTGATACGGTGTTTTAGAACAGCGCCCTCTTGTGGGCAATTTAACCACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCACGTCTACTAAGGACGGGAATGTGAAGATTTGTTTTCTGGTGTCTCGCTTACTCTGGGCAGTTTaGCAGCTCTTGTCTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LFTSTKDGNVKICFLVSRLLWAV*QLLSSV Trigger: GACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAA...GCGAGACACCAGAAAACAAATCTTCACATTCCCGTCCTTAGTAGACGTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CAA 90 bp | AAACAGAATGAGATTCATGCCAGAGAAACACAGAGAGAAGGCAGTTaGGTATCCTGTTTGGGGTGTAACTATGGCCACTGTGTGCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KQNEIHARETQREGS*VSCLGCNYGHCVQR Trigger: CCTTTGCACACAGTGGCCATAGTTACACCCCAAACAGGATACCAAACTGCCTTCTCTCTGTGTTTCTCTGGCATGAATCTCATTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | GAGTTCCCACCCTATGGAATTACTGTTTTTATAAATAGACACAGTACAGTGTTTGGTGGCGCATGCCTTTaGTCCCAGCACCCAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: EFPPYGITVFINRHSTVFGGACL*SQHPED Trigger: GTCTTCTGGGTGCTGGGATCAAAGGCATGCGCCACC...AAACACTGTACTGTGTCTATTTATAAAAACAGTAATTCCATAGGGTGGGAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTAAATACAACACACAGTCTTTATGTTGGTGTTTCGATGCGATGGCCAGGCCCTTTTCTGGTACTTaGGGACTGGTCCTTCTTTTG | + |
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Preference number: 2 (lower is better) Translates to: LSKYNTQSLCWCFDAMARPFSGT*GLVLLL Trigger: CAAAAGAAGGACCAGTCCTCAAGTACCAGAAAAGGG...CCTGGCCATCGCATCGAAACACCAACATAAAGACTGTGTGTTGTATTTACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTAAATACAACACACAGTCTTTATGTTGGTGTTTCGATGCGATGGCCAGGACAGGACACTGCAGTTaGCAAAGGCCTTCAGAATTA | + |
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Preference number: 2 (lower is better) Translates to: LSKYNTQSLCWCFDAMARTGHCS*QRPSEL Trigger: TAATTCTGAAGGCCTTTGTCAACTGCAGTGTCCTGT...CCTGGCCATCGCATCGAAACACCAACATAAAGACTGTGTGTTGTATTTACTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTAAAACACCGTATCACAAACAATTCAACTGAGACTTGTGTAGCTTCTGGTATGATATGTGCTAGGTaGTGGTGGCGCATGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VLKHRITNNSTETCVASGMICAR*WWRMPL Trigger: CAAAGGCATGCGCCACCATCACCTAGCACATATCAT...ACCAGAAGCTACACAAGTCTCAGTTGAATTGTTTGTGATACGGTGTTTTAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAGTAAATACAACACACAGTCTTTATGTTGGTGTTTCGATGCGATGGCCAGGCAAGAAGACATCCCATaGGAAATTCCTTCCATCCAT | + |
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Preference number: 2 (lower is better) Translates to: LSKYNTQSLCWCFDAMARQEDIP*EIPSIH Trigger: ATGGATGGAAGGAATTTCTCATGGGATGTCTTCTTG...CCTGGCCATCGCATCGAAACACCAACATAAAGACTGTGTGTTGTATTTACTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR GCA 90 bp | GCAATGAACCTTGATGTTATAGCCTGCTTACTGTGGGCCAAGCATGCTTACAACGAGGTGAAATTGGTTTaGATCAGGACTATGTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: AMNLDVIACLLWAKHAYNEVKLV*IRTMSL Trigger: TAGAGACATAGTCCTGATGCAAACCAATTTCACCTC...GTTGTAAGCATGCTTGGCCCACAGTAAGCAGGCTATAACATCAAGGTTCATTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | GCAATGAACCTTGATGTTATAGCCTGCTTACTGTGGGCCAAGCATGCTTACAACAACCAACCAACCAAGTaGTATGCAAACCAAATTTGT | + |
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Preference number: 2 (lower is better) Translates to: AMNLDVIACLLWAKHAYNNQPTK*YANQIC Trigger: ACAAATTTGGTTTGCATATCACTTGGTTGGTTGGTT...GTTGTAAGCATGCTTGGCCCACAGTAAGCAGGCTATAACATCAAGGTTCATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR CCA 90 bp | GTTCTAAAACACCGTATCACAAACAATTCAACTGAGACTTGTGTAGCTTCTGGTAGAGAGAAGGCAGTTTaGTATCCTGTTTGGGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: VLKHRITNNSTETCVASGREKAV*YPVWGV Trigger: TACACCCCAAACAGGATACCAAACTGCCTTCTCTCT...ACCAGAAGCTACACAAGTCTCAGTTGAATTGTTTGTGATACGGTGTTTTAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGCATTTCAGCCTTACCATACCCATCTTTGAAATCTCGGTTTCCTTACCTTCGAATTGTGTGAGGTaGAATTGGTTTGCATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KKHFSLTIPIFEISVSLPSNCVR*NWFASG Trigger: TCCTGATGCAAACCAATTTCACCTCACACAATTCGA...AGGTAAGGAAACCGAGATTTCAAAGATGGGTATGGTAAGGCTGAAATGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGCATTTCAGCCTTACCATACCCATCTTTGAAATCTCGGTTTCCTTACCTCACAAACAATTCAACTaGGACTTGTGTAGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KKHFSLTIPIFEISVSLPHKQFN*DLCSFW Trigger: CCAGAAGCTACACAAGTCTCAGTTGAATTGTTTGTG...AGGTAAGGAAACCGAGATTTCAAAGATGGGTATGGTAAGGCTGAAATGCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR CAA 90 bp | TTTGTCACAGATTTAATTAGTGTTCCAGAGAAATATCTGCCTGAATaGCAACCCATTACCAGTCCTAGTGACTCTCTTGCTATTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: FVTDLISVPEKYLPE*QPITSPSDSLAIES Trigger: TGATTCAATAGCAAGAGAGTCACTAGGACTGGTAATGGGTTGCAATTCAGGCAGATATTTCTCTGGAACACTAATTAAATCTGTGACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTTACCTGTAAAACAAAGTAAAGAGTTCCCACCCTATGGAATTACTGTTTTTTTCCAGAGAAATATCTaGCTGAATTGCAACCCATTA | + |
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Preference number: 2 (lower is better) Translates to: SLPVKQSKEFPPYGITVFFQRNI*LNCNPL Trigger: TAATGGGTTGCAATTCAGGCAGATATTTCTCTGGAA...AAAAACAGTAATTCCATAGGGTGGGAACTCTTTACTTTGTTTTACAGGTAAGGA 36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR GCA 90 bp | GAGTTCCCACCCTATGGAATTACTGTTTTTATAAATAGACACAGTACAGTGTTTACCAACCAAGTGATATaGAAACCAAATTTGTCACAG | + |
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Preference number: 2 (lower is better) Translates to: EFPPYGITVFINRHSTVFTNQVI*KPNLSQ Trigger: CTGTGACAAATTTGGTTTGCATATCACTTGGTTGGT...AAACACTGTACTGTGTCTATTTATAAAAACAGTAATTCCATAGGGTGGGAACTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR TCA 72 bp | CGCGTGGAGTCCTCCCACTGTGCTCTGAGAACGATGTaGAGAGCGACCTTAGCAAACAGTCCGCCCTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: RVESSHCALRTM*RATLANSPPWA Trigger: CGCCCAGGGCGGACTGTTTGCTAAGGTCGCTCTTCACATCGTTCTCAGAGCACAGTGGGAGGACTCCACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR GCA 72 bp | GTTAGAGACATCTGTGTGAAGGGCTTCGTGGCACCATaGTCGATAAGGGTGAACCCCAACTGCCTCATGGGG | + |
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Preference number: 3 (lower is better) Translates to: VRDICVKGFVAP*SIRVNPNCLMG Trigger: CCCCATGAGGCAGTTGGGGTTCACCCTTATCGAGCATGGTGCCACGAAGCCCTTCACACAGATGTCTCTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CCA 72 bp | TTGGGGTGTAACTATGGCCACTGTGTGCAAAGGATCTaGGTGGAGGTAAAGACAGGCAGCCAAGCCAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGCNYGHCVQRI*VEVKTGSQASS Trigger: AGAGCTGGCTTGGCTGCCTGTCTTTACCTCCACCCAGATCCTTTGCACACAGTGGCCATAGTTACACCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCACGTCTACTAAGGACGGGAATGTGAAGATTTGTTTTCTGGTGTCTCGCCGGTGTCTCCGACTTTaGCCCCAGAGACCCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: LFTSTKDGNVKICFLVSRRCLRL*PQRPSL Trigger: GAGGGAGGGTCTCTGGGGCAAAAGTCGGAGACACCG...GCGAGACACCAGAAAACAAATCTTCACATTCCCGTCCTTAGTAGACGTGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR TCA 72 bp | TGCTTCAGAGCCCATTCAGTGAGCTCAGTGTGTCCGTaGAAAGCAGCGATGTACAGGGCTACCCTTTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: CFRAHSVSSVCP*KAAMYRATLFW Trigger: CCAGAAAAGGGTAGCCCTGTACATCGCTGCTTTTCACGGACACACTGAGCTCACTGAATGGGCTCTGAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR CCA 72 bp | AGCACCCAGAAGACAAAGGCAGGCAGATCTCTGAGTTaGAGGCCAGCCAGATCTACAGAGCAAGTTCTAGGA | + |
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Preference number: 3 (lower is better) Translates to: STQKTKAGRSLS*RPARSTEQVLG Trigger: TCCTAGAACTTGCTCTGTAGATCTGGCTGGCCTCCAACTCAGAGATCTGCCTGCCTTTGTCTTCTGGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR-3UTR CAA 90 bp | TGCCTCCTGTGTTCACTCTATGAAGCCTTCGGAGCTACTGCTGGCTCCTACCCTTTGTGTGAGGTGAAATaGGTTTGCATCAGGACTATG | + |
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Preference number: 3 (lower is better) Translates to: CLLCSLYEAFGATAGSYPLCEVK*VCIRTM Trigger: CATAGTCCTGATGCAAACCAATTTCACCTCACACAA...AGGGTAGGAGCCAGCAGTAGCTCCGAAGGCTTCATAGAGTGAACACAGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR TCA 72 bp | ATGGTTGTAAGAACTCTGCCTCCTGTGTTCACTCTATaGAGCCTTCGGAGCTACTGCTGGCTCCTACCCTTT | + |
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Preference number: 3 (lower is better) Translates to: MVVRTLPPVFTL*SLRSYCWLLPF Trigger: AAAGGGTAGGAGCCAGCAGTAGCTCCGAAGGCTTCATAGAGTGAACACAGGAGGCAGAGTTCTTACAACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR CCA 72 bp | CGGAGCTACTGCTGGCTCCTACCCTTTAGAAAAGCGTaGTTAAATTGCCCACAAGAGGGCGCTGTTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: RSYCWLLPFRKA*LNCPQEGAVLK Trigger: TTTTAGAACAGCGCCCTCTTGTGGGCAATTTAACCACGCTTTTCTAAAGGGTAGGAGCCAGCAGTAGCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR CCA 72 bp | CTGCTTGACTGTTGCTTGCAGGGTGGTAGTTTACTCTaGGCAGTTTGCCAGCTCTTGTCTTCAGTCTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: LLDCCLQGGSLL*AVCQLLSSVLY Trigger: GTACAAGACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAAACTACCACCCTGCAAGCAACAGTCAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR-3UTR CAA 90 bp | GAGCTCAGTGTGTCCGTGAAAAGCAGCGATGTACAGGGCTACCCTTTTCTGGTAACATGTTCTCCATTATaGGCATCATCTCCTGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: ELSVSVKSSDVQGYPFLVTCSPL*ASSPGS Trigger: TGACCCAGGAGATGATGCCAATAATGGAGAACATGT...TACCAGAAAAGGGTAGCCCTGTACATCGCTGCTTTTCACGGACACACTGAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| 3UTR TCA 72 bp | TCTTGTACCAACTCTTGGAGGTCATCTTGGGCTTGGTaGAACCATCAACCATCACGGTGTCTCCGACTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCTNSWRSSWAW*NHQPSRCLRLL Trigger: CAAAAGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR GCA 72 bp | TGTTGCTTGCAGGGTGGTAGTTTACTCTGGGCAGTTTaGCAGCTCTTGTCTTCAGTCTTGTACCAACTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CCLQGGSLLWAV*QLLSSVLYQLL Trigger: CAAGAGTTGGTACAAGACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAAACTACCACCCTGCAAGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGGTTAAATTGCCCACAAGAGGGCGCTGTTCTAAAACACCGTATCACAAACAGAGAGAAGGCAGTTaGGTATCCTGTTTGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SVVKLPTRGRCSKTPYHKQREGS*VSCLGC Trigger: ACACCCCAAACAGGATACCAAACTGCCTTCTCTCTG...TTTGTGATACGGTGTTTTAGAACAGCGCCCTCTTGTGGGCAATTTAACCACGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR GCA 72 bp | CTCGCTGTGACACTGGTAAAGAATAGACAGGTTTCCTaGTTGACTGTTGCTTGCAGGGTGGTAGTTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LAVTLVKNRQVS*LTVACRVVVYS Trigger: AGAGTAAACTACCACCCTGCAAGCAACAGTCAAGCAGGAAACCTGTCTATTCTTTACCAGTGTCACAGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAGCTGGCTTTTATGGCACCTATGACTCTGAGCTCGGAGAATCCATTGTTTTGGACTTTAGGTTTTaGCCCAAGAAGACATCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: CQAGFYGTYDSELGESIVLDFRF*PKKTSH Trigger: ATGGGATGTCTTCTTGGGCAAAAACCTAAAGTCCAA...AACAATGGATTCTCCGAGCTCAGAGTCATAGGTGCCATAAAAGCCAGCTTGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR TCA 72 bp | GCCTGCTTACTGTGGGCCAAGCATGCTTACAACGATTaGCTTAGTTCATCTCTAGGAAGCTTCTATGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ACLLWAKHAYND*LSSSLGSFYAV Trigger: TACAGCATAGAAGCTTCCTAGAGATGAACTAAGTCAATCGTTGTAAGCATGCTTGGCCCACAGTAAGCAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR TCA 72 bp | GCCCCTCTCATACTGAATAATAATAGCAATGAACCTTaGTGTTATAGCCTGCTTACTGTGGGCCAAGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: APLILNNNSNEP*CYSLLTVGQAC Trigger: GCATGCTTGGCCCACAGTAAGCAGGCTATAACATCAAGGTTCATTGCTATTATTATTCAGTATGAGAGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR TCA 72 bp | CTGTTTGGCCATATCTCTATTCAAACAGGGCTGCCGTaGCTTTTCAAAGCACAGTTTCTGGATAGTTTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LFGHISIQTGLP*LFKAQFLDSFH Trigger: GTGAAAACTATCCAGAAACTGTGCTTTGAAAAGTCACGGCAGCCCTGTTTGAATAGAGATATGGCCAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCGTGGTTAAATTGCCCACAAGAGGGCGCTGTTCTAAAACACCGTATCACAAAGTCCTAGTGACTCTCTaGCTATTGAATCATCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SVVKLPTRGRCSKTPYHKVLVTL*LLNHQI Trigger: TATTTGATGATTCAATAGCAAGAGAGTCACTAGGAC...TTTGTGATACGGTGTTTTAGAACAGCGCCCTCTTGTGGGCAATTTAACCACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTTCTAAAACACCGTATCACAAACAATTCAACTGAGACTTGTGTAGCTTCTAAAAAGAGCGAACTATaGCTCCATCGAGAGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AVLKHRITNNSTETCVASKKSEL*LHREES Trigger: GCTCTCCTCTCGATGGAGCAATAGTTCGCTCTTTTT...AGAAGCTACACAAGTCTCAGTTGAATTGTTTGTGATACGGTGTTTTAGAACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR TCA 72 bp | AATTTGTATTACTCAGTATACCATAGTAGGGTTTCATaGACACTCCTCTGTCCTAGACCTGCCTCATTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: NLYYSVYHSRVS*TLLCPRPASFR Trigger: CCTAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| 3UTR TCA 72 bp | TTTTATTTGGATCGTAGCAAACACATTCAAACAGAATaGGATTCATGCCAGAGAAACACAGAGAGAAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FYLDRSKHIQTE*DSCQRNTERRQ Trigger: CTGCCTTCTCTCTGTGTTTCTCTGGCATGAATCTCATTCTGTTTGAATGTGTTTGCTACGATCCAAATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTCCTGTGTTCACTCTATGAAGCCTTCGGAGCTACTGCTGGCTCCTACCCTCATCTCCAGTCCCGTTaGTGTCCGGAGACAGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLLCSLYEAFGATAGSYPHLQSR*CPETVD Trigger: GTCTACTGTCTCCGGACACCAACGGGACTGGAGATG...AGGGTAGGAGCCAGCAGTAGCTCCGAAGGCTTCATAGAGTGAACACAGGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR CAA 72 bp | ATTCCTTCCATCCATCCCAGACATCCAGACGAAGTGTaGTGCAGGGAAGCCGCATCTCAGAGTTACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPSIHPRHPDEV*CREAASQSYQH Trigger: ATGCTGGTAACTCTGAGATGCGGCTTCCCTGCACAACACTTCGTCTGGATGTCTGGGATGGATGGAAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR TCA 90 bp | CATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTGCTTCTGCGGCTGCGTaGATCGGGCAGTTAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HEHSSVLDLPHLGFALVFASAAA*IGQLET Trigger: TGTCTCTAACTGCCCGATTCACGCAGCCGCAGAAGC...AAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCTGTGTTCACTCTATGAAGCCTTCGGAGCTACTGCTGGCTCCTACCCTGCTCAAGATACCACCTaGCTTGTTTGTCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLLCSLYEAFGATAGSYPAQDTT*LVCLQK Trigger: TTTCTGAAGACAAACAAGGCAGGTGGTATCTTGAGC...AGGGTAGGAGCCAGCAGTAGCTCCGAAGGCTTCATAGAGTGAACACAGGAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR GCA 90 bp | TGCCTCCTGTGTTCACTCTATGAAGCCTTCGGAGCTACTGCTGGCTCCTACCCTTGGACTTTAGGTTTTTaGCCAAGAAGACATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: CLLCSLYEAFGATAGSYPWTLGF*PRRHPM Trigger: CATGGGATGTCTTCTTGGGCAAAAACCTAAAGTCCA...AGGGTAGGAGCCAGCAGTAGCTCCGAAGGCTTCATAGAGTGAACACAGGAGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGGCCAGCTTCTGCGGCTaGGTGAATCGGGCAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCPRPASFRICPCIFEEASFCG*VNRAVR Trigger: TCTAACTGCCCGATTCACGCAGCCGCAGAAGCTGGC...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | CTTCCATCCATCCCAGACATCCAGACGAAGTGTTGTGCAGGGAAGCCGCATCTCTTTGTCTTTATCATCTaGTTGATGGCACCCACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSIPDIQTKCCAGKPHLFVFII*LMAPTD Trigger: ATCGGTGGGTGCCATCAAGCAGATGATAAAGACAAA...GAGATGCGGCTTCCCTGCACAACACTTCGTCTGGATGTCTGGGATGGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR CAA 72 bp | TCAGTCTTGTACCAACTCTTGGAGGTCATCTTGGGCTaGGTGAAACCATCAACCATCACGGTGTCTCCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVLYQLLEVILG*VKPSTITVSPT Trigger: AGTCGGAGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| 3UTR CAA 72 bp | CAGGGTGGTAGTTTACTCTGGGCAGTTTGCCAGCTCTaGTCTTCAGTCTTGTACCAACTCTTGGAGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QGGSLLWAVCQL*SSVLYQLLEVI Trigger: GATGACCTCCAAGAGTTGGTACAAGACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAAACTACCACCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR GCA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGTCCTGCCGCGTTCTTaGATTCCAGGCACAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLVLPRS*IPGTGH Trigger: GTGTCCTGTGCCTGGAATGCAAGAACGCGGCAGGAC...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGGTGTCTCCGACTTTTaGCCCAGAGACCCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLGVSDF*PRDPPS Trigger: AGAGGGAGGGTCTCTGGGGCAAAAGTCGGAGACACC...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| 3UTR CAA 72 bp | GCTGTGACACTGGTAAAGAATAGACAGGTTTCCTGCTaGACTGTTGCTTGCAGGGTGGTAGTTTACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVTLVKNRQVSC*TVACRVVVYSG Trigger: CCCAGAGTAAACTACCACCCTGCAAGCAACAGTCAAGCAGGAAACCTGTCTATTCTTTACCAGTGTCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR TCA 90 bp | CATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTCCTGGGTCACGGCATTaGACACATAGAGAGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HEHSSVLDLPHLGFALVFPGSRH*THREWV Trigger: AACCCACTCTCTATGTGTTCAATGCCGTGACCCAGG...AAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | CAGATCTCTGAGTTGGAGGCCAGCCAGATCTACAGAGCAAGTTCTAGGATAGCCCAAGAAGACATCCCATaGGAAATTCCTTCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QISELEASQIYRASSRIAQEDIP*EIPSIH Trigger: ATGGATGGAAGGAATTTCTCATGGGATGTCTTCTTG...GGCTATCCTAGAACTTGCTCTGTAGATCTGGCTGGCCTCCAACTCAGAGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR TCA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGACAGGTTTCCTGCTTaGCTGTTGCTTGCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLDRFPA*LLLAGW Trigger: CCACCCTGCAAGCAACAGTCAAGCAGGAAACCTGTC...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTACCTCCCACTGTGCTCTaGGAACGATGTGAAGAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLPPTVL*ERCEER Trigger: TCGCTCTTCACATCGTTCTCAGAGCACAGTGGGAGG...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | GTTGAACAGAAAGATATTCCAACGTCCGACAGACTCCAGCTGTTCCTTAGGGCCTCTTTATCATCTGCTTaGTGGCACCCACCGATGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VEQKDIPTSDRLQLFLRASLSSA*WHPPMY Trigger: ATACATCGGTGGGTGCCATCAAGCAGATGATAAAGA...GGCCCTAAGGAACAGCTGGAGTCTGTCGGACGTTGGAATATCTTTCTGTTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR GCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCTGGGGCTGCACCCCCTaGTTCAGAGCCCATTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVWGCTP*FRAHSV Trigger: CACTGAATGGGCTCTGAAGCAGGGGGTGCAGCCCCA...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGTTCAGAATTAACAGCTaGCCAGCTTCTGCGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLCPRPASFRICPCIFEEFRINS*PASAAA Trigger: CGCAGCCGCAGAAGCTGGCCAGCTGTTAATTCTGAA...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGAGGGCTACCCTTTTCTaGTACTTGAGGACTGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCPRPASFRICPCIFEERATLF*YLRTGP Trigger: AGGACCAGTCCTCAAGTACCAGAAAAGGGTAGCCCT...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGCAGCTAAGCAGTAAATaGCATTCTCGCGTGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCPRPASFRICPCIFEEQLSSK*HSRVES Trigger: GGACTCCACGCGAGAATGCCATTTACTGCTTAGCTG...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| 3UTR CAA 72 bp | AGAGAAACACAGAGAGAAGGCAGTTTGGTATCCTGTTaGGGGTGTAACTATGGCCACTGTGTGCAAAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RETQREGSLVSC*GCNYGHCVQRI Trigger: GATCCTTTGCACACAGTGGCCATAGTTACACCCCAAACAGGATACCAAACTGCCTTCTCTCTGTGTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| 3UTR CAA 72 bp | TTGTCTTCAGTCTTGTACCAACTCTTGGAGGTCATCTaGGGCTTGGTGAAACCATCAACCATCACGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVLYQLLEVI*GLVKPSTITVS Trigger: AGACACCGTGATGGTTGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAGTTGGTACAAGACTGAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR GCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCAGAGACCCTCCCTCTaGCAAGCTGGCTTTTATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVQRPSL*QAGFYG Trigger: GCCATAAAAGCCAGCTTGGCAGAGGGAGGGTCTCTG...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCAATGGCATTCTCGCGTaGAGTCCTCCCACTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVNGILA*SPPTVL Trigger: GAGCACAGTGGGAGGACTCCACGCGAGAATGCCATT...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCTAAAACACCGTATCACAAACAATTCAACTGAGACTTGTGTAGCTTCTCCTGGGTCACGGCATTaGACACATAGAGAGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AVLKHRITNNSTETCVASPGSRH*THREWV Trigger: AACCCACTCTCTATGTGTTCAATGCCGTGACCCAGG...AGAAGCTACACAAGTCTCAGTTGAATTGTTTGTGATACGGTGTTTTAGAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR TCA 90 bp | ATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTATGCATAATCCACTCTTaGAACGGGAGGGAGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICITQYTIVGFHEHSSVLCIIHS*NGREGD Trigger: GTCCCCCTCCCTCCCGTTTCAAGAGTGGATTATGCA...TAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCGGAGTCCTCCCACTGTaGTCTGAGAACGATGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVGVLPL*SENDVK Trigger: CTTCACATCGTTCTCAGAGCACAGTGGGAGGACTCC...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGATTGGCATCATCTCCTaGGTCACGGCATTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLIGIIS*VTALNT Trigger: TGTGTTCAATGCCGTGACCCAGGAGATGATGCCAAT...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAAGCTGGCTTTTATGGCACCTATGACTCTGAGCTCGGAGAATCCATTGTTTGCTTCAACATCGAATaGCTCAAAAGATCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CQAGFYGTYDSELGESIVCFNIE*LKRSFK Trigger: TTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCA...AACAATGGATTCTCCGAGCTCAGAGTCATAGGTGCCATAAAAGCCAGCTTGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGTGGACTTTAGGTTTTTaGCCAAGAAGACATCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLCPRPASFRICPCIFEEWTLGF*PRRHPM Trigger: CATGGGATGTCTTCTTGGGCAAAAACCTAAAGTCCA...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR CCA 90 bp | ATATTTCATGGTTGTAAGAACTCTGCCTCCTGTGTTCACTCTATGAAGCCTTCGCATGTTCTCCATTATTaGCATCATCTCCTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFHGCKNSASCVHSMKPSHVLHY*HHLLGH Trigger: GTGACCCAGGAGATGATGCCAATAATGGAGAACATG...CGAAGGCTTCATAGAGTGAACACAGGAGGCAGAGTTCTTACAACCATGAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
||
| CDS-3UTR CCA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCATGTTCTCCATTATTaGCATCATCTCCTGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLHVLHY*HHLLGH Trigger: GTGACCCAGGAGATGATGCCAATAATGGAGAACATG...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | ATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTATTAGAGACATCTGTGTaGAGGGCTTCGTGGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ICITQYTIVGFHEHSSVLLETSV*RASWHH Trigger: ATGGTGCCACGAAGCCCTTCACACAGATGTCTCTAA...TAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR TCA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTACTAAGGACGGGAATGTaGAGATTTGTTTTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLLRTGM*RFVFWC Trigger: ACACCAGAAAACAAATCTTCACATTCCCGTCCTTAG...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
||
| CDS-3UTR GCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCTTACTCTGGGCAGTTTaGCAGCTCTTGTCTTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVLLWAV*QLLSSV Trigger: GACTGAAGACAAGAGCTGGCAAACTGCCCAGAGTAA...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR TCA 90 bp | ATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTACCCTTTTCTGGTACTTaGGGACTGGTCCTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICITQYTIVGFHEHSSVLPFSGT*GLVLLL Trigger: CAAAAGAAGGACCAGTCCTCAAGTACCAGAAAAGGG...TAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR TCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCACAGGACACTGCAGTTaGCAAAGGCCTTCAGAATTA | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVTGHCS*QRPSEL Trigger: TAATTCTGAAGGCCTTTGTCAACTGCAGTGTCCTGT...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR TCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCAAGAAGACATCCCATaGGAAATTCCTTCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVQEDIP*EIPSIH Trigger: ATGGATGGAAGGAATTTCTCATGGGATGTCTTCTTG...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR GCA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGTGCTTCAACATCGAATaGCTCAAAAGATCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLCFNIE*LKRSFK Trigger: TTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCA...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR GCA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCGCTCAAGATACCACCTaGCTTGTTTGTCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AICITQYTIVGFHEHSSVAQDTT*LVCLQK Trigger: TTTCTGAAGACAAACAAGGCAGGTGGTATCTTGAGC...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CCA 90 bp | TCCTTACCTGTAAAACAAAGTAAAGAGTTCCCACCCTATGGAATTACTGTTTTTATTGGCATCATCTCCTaGGTCACGGCATTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: SLPVKQSKEFPPYGITVFIGIIS*VTALNT Trigger: TGTGTTCAATGCCGTGACCCAGGAGATGATGCCAAT...AAAAACAGTAATTCCATAGGGTGGGAACTCTTTACTTTGTTTTACAGGTAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| 3UTR CAA 72 bp | GATTTAATTAGTGTTCCAGAGAAATATCTGCCTGAATaGCAACCCATTACCAGTCCTAGTGACTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLISVPEKYLPE*QPITSPSDSLA Trigger: AGCAAGAGAGTCACTAGGACTGGTAATGGGTTGCAATTCAGGCAGATATTTCTCTGGAACACTAATTAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS-3UTR GCA 90 bp | TCTCTACAGAGAATTCAGGTTCATGGAGGCTTAGAACTAAGTGACTTAAATCCATGCTTCAACATCGAATaGCTCAAAAGATCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLQRIQVHGGLELSDLNPCFNIE*LKRSFK Trigger: TTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCA...TGGATTTAAGTCACTTAGTTCTAAGCCTCCATGAACCTGAATTCTCTGTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS TCA 90 bp | AGACATCCAGACGAAGTGTTGTGCCGATATCAGTCTGGTAATCCTTaGGGGTGTTGCAGTCATACATCTCCAGTCCCGTTGGTGTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHPDEVLCRYQSGNP*GCCSHTSPVPLVSG Trigger: TCCGGACACCAACGGGACTGGAGATGTATGACTGCAACACCCTCAAGGATTACCAGACTGATATCGGCACAACACTTCGTCTGGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS-3UTR CAA 90 bp | CATGAACACTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTGTCCTGCCGCGTTCTaGCATTCCAGGCACAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: HEHSSVLDLPHLGFALVFCPAAF*HSRHRT Trigger: TGTCCTGTGCCTGGAATGCAAGAACGCGGCAGGACA...AAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | CTTCCATCCATCCCAGACATCCAGACGAAGTGTTGTGCAGGGAAGCCGCATCTCAAGATACCACCTGCCTaGTTTGTCTTTATCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSIPDIQTKCCAGKPHLKIPPA*FVFIIC Trigger: GCAGATGATAAAGACAAACAAGGCAGGTGGTATCTT...GAGATGCGGCTTCCCTGCACAACACTTCGTCTGGATGTCTGGGATGGATGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTACGGTGTCTCCGACTTTaGCCCCAGAGACCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICITQYTIVGFHEHSSVLRCLRL*PQRPSL Trigger: GAGGGAGGGTCTCTGGGGCAAAAGTCGGAGACACCG...TAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGGTGCATAATCCACTCTaGAAACGGGAGGGAGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLVHNPL*KREGGG Trigger: TCCCCCTCCCTCCCGTTTCAAGAGTGGATTATGCAC...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | GCTGTTCTAAAACACCGTATCACAAACAATTCAACTGAGACTTGTGTAGCTTCTACATCTCCAGTCCCGTaGGTGTCCGGAGACAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVLKHRITNNSTETCVASTSPVP*VSGDSR Trigger: TCTACTGTCTCCGGACACCAACGGGACTGGAGATGT...AGAAGCTACACAAGTCTCAGTTGAATTGTTTGTGATACGGTGTTTTAGAACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS-3UTR CAA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGGAGGTCATCTTGGGCTaGGTGAAACCATCAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLEVILG*VKPSTI Trigger: GATGGTTGATGGTTTCACCAAGCCCAAGATGACCTC...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | TATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGCCTCATTTACTCTTGGAGGTCATCTaGGGCTTGGTGAAACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: YTIVGFHEHSSVLDLPHLLLEVI*GLVKPS Trigger: TGATGGTTTCACCAAGCCCAAGATGACCTCCAAGAG...TAAATGAGGCAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGGCAGTTTGCCAGCTCTaGTCTTCAGTCTTGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LLCPRPASFRICPCIFEEAVCQL*SSVLYQ Trigger: TTGGTACAAGACTGAAGACAAGAGCTGGCAAACTGC...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS TCA 90 bp | TGTCTTCAGAAAGAGGAATGTGGAAGTAATCCTTTATCATCTGCTTaGTGGCACCCACCGATGTATGTGCTTCAACATCGAATGCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CLQKEECGSNPLSSA*WHPPMYVLQHRMPQ Trigger: TTGAGGCATTCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAGGATTACTTCCACATTCCTCTTTCTGAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS-3UTR CAA 90 bp | ATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAGACCTGACATGTTCTCCATTATaGGCATCATCTCCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITQYTIVGFHEHSSVLDLTCSPL*ASSPGS Trigger: TGACCCAGGAGATGATGCCAATAATGGAGAACATGT...CAGGTCTAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | CTCCTCTGTCCTAGACCTGCCTCATTTAGGATTTGCCCTTGTATTTTTGAAGAGTTGGACTTTAGGTTTTaGCCCAAGAAGACATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLCPRPASFRICPCIFEELDFRF*PKKTSH Trigger: ATGGGATGTCTTCTTGGGCAAAAACCTAAAGTCCAA...CTCTTCAAAAATACAAGGGCAAATCCTAAATGAGGCAGGTCTAGGACAGAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCGGGAATGTGAAGATTaGTTTTCTGGTGTCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AICITQYTIVGFHEHSSVRECED*FSGVSL Trigger: CAGCGAGACACCAGAAAACAAATCTTCACATTCCCG...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS GCA 90 bp | GAAGTAATCCTTTATCATCTGCTTGATGGCACCCACCGATGTATGTaGTTCAACATCGAATGCCTCAAAAGATCCTTCAAAAGCTATGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVILYHLLDGTHRCM*FNIECLKRSFKSYE Trigger: TTCATAGCTTTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAGGATTACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS GCA 90 bp | CTTGTTTGTCTTTATCATCTGCTTGATGGCACCCACCGATGTATGTaGTTCAACATCGAATGCCTCAAAAGATCCTTCAAAAGCTATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LVCLYHLLDGTHRCM*FNIECLKRSFKSYE Trigger: TTCATAGCTTTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAGACAAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCATTTCAGCCTTACCATACCCATCTTTGAAATCTCGGTTTCCTTACCTACATGTTCTCCATTATaGGCATCATCTCCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KKHFSLTIPIFEISVSLPTCSPL*ASSPGS Trigger: TGACCCAGGAGATGATGCCAATAATGGAGAACATGT...AGGTAAGGAAACCGAGATTTCAAAGATGGGTATGGTAAGGCTGAAATGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS-3UTR CAA 90 bp | GCAATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCACCCTTTTCTGGTACTaGAGGACTGGTCCTTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AICITQYTIVGFHEHSSVTLFWY*RTGPSF Trigger: AAAAGAAGGACCAGTCCTCAAGTACCAGAAAAGGGT...GACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | ATTTGTATTACTCAGTATACCATAGTAGGGTTTCATGAACACTCCTCTGTCCTAAAGATACCACCTGCCTaGTTTGTCTTCAGAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ICITQYTIVGFHEHSSVLKIPPA*FVFRKR Trigger: CCTCTTTCTGAAGACAAACAAGGCAGGTGGTATCTT...TAGGACAGAGGAGTGTTCATGAAACCCTACTATGGTATACTGAGTAATACAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197088.5 |
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| CDS-3UTR CAA 90 bp | GAAGCTAGACTCACTGTCATTTCAAAGCTCGAATACAACCAATCATTTAAAATCAAGATACCACCTGCCTaGTTTGTCTTCAGAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EARLTVISKLEYNQSFKIKIPPA*FVFRKR Trigger: CCTCTTTCTGAAGACAAACAAGGCAGGTGGTATCTT...GATTTTAAATGATTGGTTGTATTCGAGCTTTGAAATGACAGTGAGTCTAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS-3UTR CAA 90 bp | TCCTTACCTGTAAAACAAAGTAAAGAGTTCCCACCCTATGGAATTACTGTTTTTTTGGACTTTAGGTTTTaGCCCAAGAAGACATCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLPVKQSKEFPPYGITVFLDFRF*PKKTSH Trigger: ATGGGATGTCTTCTTGGGCAAAAACCTAAAGTCCAA...AAAAACAGTAATTCCATAGGGTGGGAACTCTTTACTTTGTTTTACAGGTAAGGA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000099091.4 |
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| CDS CCA 72 bp | CTTGAGGGTGTTGCAGTCATACATCTCCAGTCCCGTTaGTGTCCGGAGACAGTAGACACTCACAGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LEGVAVIHLQSR*CPETVDTHREA Trigger: GGCTTCCCTGTGAGTGTCTACTGTCTCCGGACACCAACGGGACTGGAGATGTATGACTGCAACACCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS TCA 72 bp | GACGAAGTGTTGTGCCGATATCAGTCTGGTAATCCTTaGGGGTGTTGCAGTCATACATCTCCAGTCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DEVLCRYQSGNP*GCCSHTSPVPL Trigger: CAACGGGACTGGAGATGTATGACTGCAACACCCTCAAGGATTACCAGACTGATATCGGCACAACACTTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS TCA 72 bp | AGATACCACCTGCCTTGTTTGTCTTTATCATCTGCTTaGTGGCACCCACCGATGTATGTGCTTCAACATCGA | + |
|
Preference number: 6 (lower is better) Translates to: RYHLPCLSLSSA*WHPPMYVLQHR Trigger: TCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAGACAAACAAGGCAGGTGGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200665.2 |
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| CDS TCA 72 bp | AAAGAGGAATGTGGAAGTAATCCTTTATCATCTGCTTaGTGGCACCCACCGATGTATGTGCTTCAACATCGA | + |
|
Preference number: 6 (lower is better) Translates to: KEECGSNPLSSA*WHPPMYVLQHR Trigger: TCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAGGATTACTTCCACATTCCTCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000238789.2 |
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| CDS GCA 72 bp | CTTTATCATCTGCTTGATGGCACCCACCGATGTATGTaGTTCAACATCGAATGCCTCAAAAGATCCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LYHLLDGTHRCM*FNIECLKRSFK Trigger: TTTGAAGGATCTTTTGAGGCATTCGATGTTGAAGCACATACATCGGTGGGTGCCATCAAGCAGATGATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099091.4 ENSMUST00000197088.5 ENSMUST00000200665.2 ENSMUST00000238789.2 |
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