Pregenerated sensors for ANKS4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030909Ensembl transcript IDs: ENSMUST00000033201.7
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGTGGTTTGTCATTAGACAGAGACCAAGCACAGGGTTCATCCTaGGGTGGTTCCAGGAGAACTCAGCATGAACCCCAGGCTCTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: PSGLSLDRDQAQGSS*GGSRRTQHEPQALA Trigger: AGCCAGAGCCTGGGGTTCATGCTGAGTTCTCCTGGAACCACCCCAGGATGAACCCTGTGCTTGGTCTCTGTCTAATGACAAACCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR GCA 90 bp | GAATTCTCAGTGCCTCTCTCCTTGGCTGGTTGGCAGCTGCCTTCCTaGTGTCCTCCTTTCTTGAGTGTGAACCAACCCTTCCCACTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: EFSVPLSLAGWQLPS*CPPFLSVNQPFPLF Trigger: GAAGAGTGGGAAGGGTTGGTTCACACTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTGAGAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 90 bp | ACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGTTaGCAGCTGCCTTCCTGCTGTCCTCCTTTCTTGAGTGTGAACCAA | + |
|
Preference number: 1 (lower is better) Translates to: TVSRFEFSVPLSLAG*QLPSCCPPFLSVNQ Trigger: TTGGTTCACACTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 90 bp | CCAAACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTaGTTGGCAGCTGCCTTCCTGCTGTCCTCCTTTCTTGAGTGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: PNCFQVRILSASLLG*LAAAFLLSSFLECE Trigger: TTCACACTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 90 bp | TCACTCCATGACCATGGTCTTAGTGCTTTGGGACCTGTGGTGAGGTaGTTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: SLHDHGLSALGPVVR*FIRSMWQRKPVQVA Trigger: GGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACCTCACCACAGGTCCCAAAGCACTAAGACCATGGTCATGGAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 90 bp | GTCACTCACTCCATGACCATGGTCTTAGTGCTTTGGGACCTGTGGTaGGGTGATTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAG | + |
|
Preference number: 1 (lower is better) Translates to: VTHSMTMVLVLWDLW*GDSLEACGRGSLFK Trigger: CTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACCTCACCACAGGTCCCAAAGCACTAAGACCATGGTCATGGAGTGAGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 90 bp | GAGTGGCCCAAACAACAGACATTTATTTTTCGCATCTCGGTAGGCTaGAAGCCCAAACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCT | + |
|
Preference number: 1 (lower is better) Translates to: EWPKQQTFIFRISVG*KPKLFPGSNSQCLS Trigger: AGAGAGGCACTGAGAATTCGAACCTGGAAACAGTTTGGGCTTTCAGCCTACCGAGATGCGAAAAATAAATGTCTGTTGTTTGGGCCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR GCA 90 bp | TTAGGGCTTCCATACATGAACTTTAGAAATTCAGTCCACATTTTCTaGCTGCCATCCCCCTACCTGCTACACGTCCTGATTCTCAGACAG | + |
|
Preference number: 1 (lower is better) Translates to: LGLPYMNFRNSVHIF*LPSPYLLHVLILRQ Trigger: CTGTCTGAGAATCAGGACGTGTAGCAGGTAGGGGGATGGCAGGCAGAAAATGTGGACTGAATTTCTAAAGTTCATGTATGGAAGCCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 90 bp | CCCAACCCCACAGTTAGCAAGCTTCTGTTAAATGATCCATTAAGTTaGGCTTTGGGCTTCAGACTAGTGAGAGCCTTTGGTCTACACAGA | + |
|
Preference number: 1 (lower is better) Translates to: PNPTVSKLLLNDPLS*ALGFRLVRAFGLHR Trigger: TCTGTGTAGACCAAAGGCTCTCACTAGTCTGAAGCCCAAAGCCCAACTTAATGGATCATTTAACAGAAGCTTGCTAACTGTGGGGTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 90 bp | GTTTTGCACCTCAGAAGACACTTAACGCTTAGAGACCTTGTGAGATaGAACAGGCATTGTTTTTCTGAATCCTCCTTGCTCTCTTCACTA | + |
|
Preference number: 1 (lower is better) Translates to: VLHLRRHLTLRDLVR*NRHCFSESSLLSSL Trigger: TAGTGAAGAGAGCAAGGAGGATTCAGAAAAACAATGCCTGTTCCATCTCACAAGGTCTCTAAGCGTTAAGTGTCTTCTGAGGTGCAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTATGAAACTATTATGTCACTCTTTCGTCTaGATTGAAACATTGCCTATTGGTGAGAGGAAGGAAACCCAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: VCVCVCMKLLCHSFV*IETLPIGERKETQK Trigger: CTTCTGGGTTTCCTTCCTCTCACCAATAGGCAATGTTTCAATTCAGACGAAAGAGTGACATAATAGTTTCATACACACACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 90 bp | CTCCTGTTAAGTAACTCCAAAACCTTCATGGTTTTGAGCTCAACTTaGATAGAATTGTTCCTTTGTTCTGTCATCGGTGCCTATCTAAGG | + |
|
Preference number: 1 (lower is better) Translates to: LLLSNSKTFMVLSST*IELFLCSVIGAYLR Trigger: CCTTAGATAGGCACCGATGACAGAACAAAGGAACAATTCTATCCAAGTTGAGCTCAAAACCATGAAGGTTTTGGAGTTACTTAACAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | AACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGTaGGCAGCTGCCTTCCTGCTGTCCTCCTTTCTTGAGTGTGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: NCFQVRILSASLLGW*AAAFLLSSFLECEP Trigger: TGGTTCACACTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCCTGGAAAGCTCTCCTTGGCTGGTTaGCAGCTGCCTTCCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GDSLEACGRGSLFKLPGKLSLAG*QLPSCC Trigger: ACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAG...CTTTCCAGGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTTGGCTGGTTGGCAGCTaGCTTCCTGCTGTCCTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: RLMKHIQVKRFTSPTPSIWLVGS*LPAVLL Trigger: AAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCA...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | CATTGTGAAAGCAGCAAAGAGCAGCTTAGGCAGGGAGCCCCCAGGAGGCACCATAAAGAAAGGGGCATTTaGAATTCCAATAACCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HCESSKEQLRQGAPRRHHKERGI*NSNNLF Trigger: GAAGAGGTTATTGGAATTCCAAATGCCCCTTTCTTT...ATGGTGCCTCCTGGGGGCTCCCTGCCTAAGCTGCTCTTTGCTGCTTTCACAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAGAAAGGGGCATTTGGAATTCCAATAACCTCTTCAAGGGCATGCTTTGATGGGTTCATCCTGGGGTaGTTCCAGGAGAACTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: AKKGAFGIPITSSRACFDGFILG*FQENSA Trigger: TGCTGAGTTCTCCTGGAACCACCCCAGGATGAACCC...ATCAAAGCATGCCCTTGAAGAGGTTATTGGAATTCCAAATGCCCCTTTCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | CTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGGAAATAGGACCACAGTGCCTCTCTCCTTaGCTGGTTGGCAGCTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LHIHIYCCTVHSHQEIGPQCLSP*LVGSCL Trigger: AAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTG...TGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCGCACAGGGTTCATCCTaGGGTGGTTCCAGGAGAACT | + |
|
Preference number: 2 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTAQGSS*GGSRRT Trigger: AGTTCTCCTGGAACCACCCCAGGATGAACCCTGTGC...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACCCATATGCTCTTGAATCCCTTCACTGGAGAGGAATGAGTGAGTTTGAGCCTGTTCAAGTTGCCTaGAAAGCAAAGAAAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KNPYALESLHWRGMSEFEPVQVA*KAKKGA Trigger: TGCCCCTTTCTTTGCTTTCCAGGCAACTTGAACAGG...CTCAAACTCACTCATTCCTCTCCAGTGAAGGGATTCAAGAGCATATGGGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | AGCCCAGTCAATATACCACACAGACCTGCACATCCATATTTATTGTaGTACTGTTCACAGTCACCAGGAAATAGGACCAGTCTGAAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SPVNIPHRPAHPYLL*YCSQSPGNRTSLKS Trigger: GGACTTCAGACTGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATTGACTGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | GGTGATTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCCTGGAAAGAGAGACCTTGTGAGATaGAACAGGCATTGTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GDSLEACGRGSLFKLPGKRDLVR*NRHCFS Trigger: AGAAAAACAATGCCTGTTCCATCTCACAAGGTCTCT...CTTTCCAGGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | CCCACAGTTAGCAAGCTTCTGTTAAATGATCCATTAAGTTGGGCTTaGGGCTTCAGACTAGTGAGAGCCTTTGGTCTACACAGAATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PTVSKLLLNDPLSWA*GFRLVRAFGLHRIQ Trigger: TTGAATTCTGTGTAGACCAAAGGCTCTCACTAGTCTGAAGCCCAAAGCCCAACTTAATGGATCATTTAACAGAAGCTTGCTAACTGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | GATAGCCCAGTCAATATACCACACAGACCTGCACATCCATATTTATaGTTGTACTGTTCACAGTCACCAGGAAATAGGACCAGTCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DSPVNIPHRPAHPYL*LYCSQSPGNRTSLK Trigger: CTTCAGACTGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATTGACTGGGCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAACAGGCAGCAGTCCTGTaGATACACACTAACGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKQAAVL*IHTNEV Trigger: CACTTCGTTAGTGTGTATCCACAGGACTGCTGCCTG...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGAACCCATATGCTCTTGAATCCCTTCACTGGAGAGGAATGAGTGAGTTTGAGTTCATTAGAAGCATGTaGCAGAGGAAGCCTGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: KNPYALESLHWRGMSEFEFIRSM*QRKPVQ Trigger: TTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAA...CTCAAACTCACTCATTCCTCTCCAGTGAAGGGATTCAAGAGCATATGGGTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | GAAACACCATTTTCCCATTTCAAGGTCTCCCAAGGTCTTTTCTCATaGATGGTTTACTTGGATACAGAGTATGAGCCTCTGATTTGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: ETPFSHFKVSQGLFS*MVYLDTEYEPLIWS Trigger: ACTCCAAATCAGAGGCTCATACTCTGTATCCAAGTAAACCATCAATGAGAAAAGACCTTGGGAGACCTTGAAATGGGAAAATGGTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCTATGAGCCTCTGATTTaGAGTGTCCTCTCTAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTYEPLI*SVLSKT Trigger: GGTTTTAGAGAGGACACTCCAAATCAGAGGCTCATA...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTACTAGTGAGAGCCTTTaGTCTACACAGAATTCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RLMKHIQVKRFTSPTPSITSESL*STQNSK Trigger: CTTTGAATTCTGTGTAGACCAAAGGCTCTCACTAGT...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 90 bp | CAGTTACCCATACTCCTGTTAAGTAACTCCAAAACCTTCATGGTTTaGAGCTCAACTTGGATAGAATTGTTCCTTTGTTCTGTCATCGGT | + |
|
Preference number: 2 (lower is better) Translates to: QLPILLLSNSKTFMV*SSTWIELFLCSVIG Trigger: ACCGATGACAGAACAAAGGAACAATTCTATCCAAGTTGAGCTCAAAACCATGAAGGTTTTGGAGTTACTTAACAGGAGTATGGGTAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR TCA 90 bp | CTAGTAACATATCCAAGAACCCATATGCTCTTGAATCCCTTCACTGGAGAGGAAAAGTCCATCAACCAGTaGATGGGAAAAGAAAATGTA | + |
|
Preference number: 2 (lower is better) Translates to: LVTYPRTHMLLNPFTGEEKSINQ*MGKENV Trigger: TACATTTTCTTTTCCCATTCACTGGTTGATGGACTT...TTCCTCTCCAGTGAAGGGATTCAAGAGCATATGGGTTCTTGGATATGTTACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAATTTCTGAATCCTCCTTaGTCTCTTCACTATCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKFLNPP*SLHYPL Trigger: AAGAGGATAGTGAAGAGAGCAAGGAGGATTCAGAAA...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR GCA 72 bp | GTGCCTCTCTCCTTGGCTGGTTGGCAGCTGCCTTCCTaGTGTCCTCCTTTCTTGAGTGTGAACCAACCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VPLSLAGWQLPS*CPPFLSVNQPF Trigger: GAAGGGTTGGTTCACACTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTGAAAGCAGCAAAGAGCAGCTTAGGCAGGGAGCCCCCAGGAGGCACCATTTTTCTGAATCCTCCTaGCTCTCTTCACTATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HCESSKEQLRQGAPRRHHFSESS*LSSLSS Trigger: AGAGGATAGTGAAGAGAGCAAGGAGGATTCAGAAAA...ATGGTGCCTCCTGGGGGCTCCCTGCCTAAGCTGCTCTTTGCTGCTTTCACAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 72 bp | GACCATGGTCTTAGTGCTTTGGGACCTGTGGTGAGGTaGTTCATTAGAAGCATGTGGCAGAGGAAGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: DHGLSALGPVVR*FIRSMWQRKPV Trigger: AACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACCTCACCACAGGTCCCAAAGCACTAAGACCATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 72 bp | TCCATGACCATGGTCTTAGTGCTTTGGGACCTGTGGTaGGGTGATTCATTAGAAGCATGTGGCAGAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SMTMVLVLWDLW*GDSLEACGRGS Trigger: GCTTCCTCTGCCACATGCTTCTAATGAATCACCTCACCACAGGTCCCAAAGCACTAAGACCATGGTCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAATCTCTCCTTGGCTGGTaGGCAGCTGCCTTCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKSLLGW*AAAFLL Trigger: CAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGA...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTCTATATAACAAGCGCTaGTCCAGGCAGCAGTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLMKHIQVKRFTSPTPSILYNKR*SRQQSC Trigger: ACAGGACTGCTGCCTGGACAAGCGCTTGTTATATAG...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | AAGTTGGGCTTTGGGCTTCAGACTAGTGAGAGCCTTTaGTCTACACAGAATTCAAAGCCTGGAAGAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: KLGFGLQTSESL*STQNSKPGRET Trigger: TGTTTCTCTTCCAGGCTTTGAATTCTGTGTAGACCAAAGGCTCTCACTAGTCTGAAGCCCAAAGCCCAACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | AGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCCTaGAAAGCAAAGAAAGGGGCATTTGGAATTCCAATA | + |
|
Preference number: 3 (lower is better) Translates to: RSMWQRKPVQVA*KAKKGAFGIPI Trigger: TATTGGAATTCCAAATGCCCCTTTCTTTGCTTTCCAGGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | ATGGTTTACTTGGATACAGAGTATGAGCCTCTGATTTaGAGTGTCCTCTCTAAAACCCTAACACCTACACCC | + |
|
Preference number: 3 (lower is better) Translates to: MVYLDTEYEPLI*SVLSKTLTPTP Trigger: GGGTGTAGGTGTTAGGGTTTTAGAGAGGACACTCCAAATCAGAGGCTCATACTCTGTATCCAAGTAAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | CTCAGAAGACACTTAACGCTTAGAGACCTTGTGAGATaGAACAGGCATTGTTTTTCTGAATCCTCCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRRHLTLRDLVR*NRHCFSESSLL Trigger: GAGCAAGGAGGATTCAGAAAAACAATGCCTGTTCCATCTCACAAGGTCTCTAAGCGTTAAGTGTCTTCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | GTAGCTCCACAGGCAGATGACCAAGGCATTAGCATATaGGTCTTTGGGTCACATCTAAGATCTAGACTATAT | + |
|
Preference number: 3 (lower is better) Translates to: VAPQADDQGISI*VFGSHLRSRLY Trigger: ATATAGTCTAGATCTTAGATGTGACCCAAAGACCCATATGCTAATGCCTTGGTCATCTGCCTGTGGAGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | ATATCCAAGAACCCATATGCTCTTGAATCCCTTCACTaGAGAGGAATGAGTGAGTTTGAGCATGTGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: ISKNPYALESLH*RGMSEFEHVSI Trigger: GATGCTCACATGCTCAAACTCACTCATTCCTCTCCAGTGAAGGGATTCAAGAGCATATGGGTTCTTGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 72 bp | AAGACTCCAGAAGCTATAGAGAATTCGCCAGGCTCATaGAGCATATACAAGTTAAGAGATTCACAAGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KTPEAIENSPGS*SIYKLRDSQAP Trigger: TGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCTGGCGAATTCTCTATAGCTTCTGGAGTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 72 bp | TGTACTGTTCACAGTCACCAGGAAATAGGACCAGTCTaGAGTCCATCAACCAGTGAATGGGAAAAGAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: CTVHSHQEIGPV*SPSTSEWEKKM Trigger: CATTTTCTTTTCCCATTCACTGGTTGATGGACTTCAGACTGGTCCTATTTCCTGGTGACTGTGAACAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | ACAGTTAGCAAGCTTCTGTTAAATGATCCATTAAGTTaGGCTTTGGGCTTCAGACTAGTGAGAGCCTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: TVSKLLLNDPLS*ALGFRLVRAFG Trigger: ACCAAAGGCTCTCACTAGTCTGAAGCCCAAAGCCCAACTTAATGGATCATTTAACAGAAGCTTGCTAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAACCTACACCCAGTGGTTaGTCATTAGACAGAGACCAA | + |
|
Preference number: 3 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKPTPSG*SLDRDQ Trigger: TTGGTCTCTGTCTAATGACAAACCACTGGGTGTAGG...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTCCTTCCCACTCTTCCTaGTCTTTTAAGTCATATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLMKHIQVKRFTSPTPSIPSHSS*SFKSYG Trigger: TCCATATGACTTAAAAGACAAGGAAGAGTGGGAAGG...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR TCA 72 bp | AAACAACAGACATTTATTTTTCGCATCTCGGTAGGCTaGAAGCCCAAACTGTTTCCAGGTTCGAATTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQQTFIFRISVG*KPKLFPGSNSQ Trigger: CTGAGAATTCGAACCTGGAAACAGTTTGGGCTTTCAGCCTACCGAGATGCGAAAAATAAATGTCTGTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CCA 72 bp | AGTAACTCCAAAACCTTCATGGTTTTGAGCTCAACTTaGATAGAATTGTTCCTTTGTTCTGTCATCGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SNSKTFMVLSST*IELFLCSVIGA Trigger: GGCACCGATGACAGAACAAAGGAACAATTCTATCCAAGTTGAGCTCAAAACCATGAAGGTTTTGGAGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGGAAATAGGACCAGATAGAATTGTTCCTTaGTTCTGTCATCGGTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHIHIYCCTVHSHQEIGPDRIVP*FCHRCL Trigger: TAGGCACCGATGACAGAACAAAGGAACAATTCTATC...TGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGGAAATAGGACCATCATTGATGGTTTACTaGGATACAGAGTATGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LHIHIYCCTVHSHQEIGPSLMVY*DTEYEP Trigger: AGGCTCATACTCTGTATCCAAGTAAACCATCAATGA...TGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTAAAACCTTCATGGTTTaGAGCTCAACTTGGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RLMKHIQVKRFTSPTPSIKTFMV*SSTWIE Trigger: TTCTATCCAAGTTGAGCTCAAAACCATGAAGGTTTT...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CCA 90 bp | ACCAAGCACAGGGTTCATCCTGGGGTGGTTCCAGGAGAACTCAGCATGAACCCCAGGCTGCCAGGAGAGTaGGTGTCATGCCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKHRVHPGVVPGELSMNPRLPGE*VSCHPH Trigger: ATGAGGATGGCATGACACCCACTCTCCTGGCAGCCT...GGGGTTCATGCTGAGTTCTCCTGGAACCACCCCAGGATGAACCCTGTGCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | CAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGTaGGCAGCTGCCTTCCTGCTGTCCTCCTTTCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVRILSASLLGW*AAAFLLSSFLE Trigger: CTCAAGAAAGGAGGACAGCAGGAAGGCAGCTGCCAACCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | ACCAAGCACAGGGTTCATCCTGGGGTGGTTCCAGGAGAACTCAGCATGAACCCCTGCATGTGGATATTCTaGAGGTCCTCATCAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TKHRVHPGVVPGELSMNPCMWIF*RSSSEQ Trigger: TTGCTCTGATGAGGACCTTCAGAATATCCACATGCA...GGGGTTCATGCTGAGTTCTCCTGGAACCACCCCAGGATGAACCCTGTGCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | ACTTGTCACTCACTCCATGACCATGGTCTTAGTGCTTTGGGACCTGTGGTGAGGAATTCCTCCAGGTGCTaGGACTGCAAGAACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TCHSLHDHGLSALGPVVRNSSRC*DCKNTS Trigger: GGAAGTGTTCTTGCAGTCTCAGCACCTGGAGGAATT...CCTCACCACAGGTCCCAAAGCACTAAGACCATGGTCATGGAGTGAGTGACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | GGTGATTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCCTGGAAAGGGGTTCATGGTGTTCTaGACAGTGGCAGCCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDSLEACGRGSLFKLPGKGFMVF*TVAALS Trigger: GGACAAGGCTGCCACTGTGCAGAACACCATGAACCC...CTTTCCAGGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | GGTGATTCATTAGAAGCATGTGGCAGAGGAAGCCTGTTCAAGTTGCCTGGAAAGTCCATCACAGGCCTCTaGCCACTTCTTCCGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDSLEACGRGSLFKLPGKSITGL*PLLPSF Trigger: GAAGGACGGAAGAAGTGGGCAGAGGCCTGTGATGGA...CTTTCCAGGCAACTTGAACAGGCTTCCTCTGCCACATGCTTCTAATGAATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCCAAACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGAGAAATGAGATGCAATaGGTGTGGCCATTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESPNCFQVRILSASLLGWRNEMQ*VWPLEA Trigger: AGCCTCCAATGGCCACACTCATTGCATCTCATTTCT...CCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGTTTGGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | GAAAGCCCAAACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGGAAGTCCTTTGGAAATaGGTCTTCTTCCTCCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESPNCFQVRILSASLLGWEVLWK*VFFLLS Trigger: AGAGAGGAGGAAGAAGACTCATTTCCAAAGGACTTC...CCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGTTTGGGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCCTGGTGTCAACCAACTaGCCAGGCTGTTGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTLVSTN*PGCWST Trigger: GGTGCTCCAACAGCCTGGGCAGTTGGTTGACACCAG...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | CTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGGAAATAGGACCATCCCTGAGTCCTCCTTaGTATAGGTGCGCGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LHIHIYCCTVHSHQEIGPSLSPP*YRCAPS Trigger: AGATGGCGCGCACCTATAGCAAGGAGGACTCAGGGA...TGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CCA 90 bp | AAGAACCCATATGCTCTTGAATCCCTTCACTGGAGAGGAATGAGTGAGTTTGAGTCAGATCACGCTTGGTaGCCTCCTTCAGAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KNPYALESLHWRGMSEFESDHAW*PPSEVP Trigger: TGGAACTTCTGAAGGAGGCCACCAAGCGTGATCTGA...CTCAAACTCACTCATTCCTCTCCAGTGAAGGGATTCAAGAGCATATGGGTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | GGGTCACATCTAAGATCTAGACTATATAACAAGCGCTaGTCCAGGCAGCAGTCCTGTGGATACACACTAACG | + |
|
Preference number: 4 (lower is better) Translates to: GSHLRSRLYNKR*SRQQSCGYTLT Trigger: CGTTAGTGTGTATCCACAGGACTGCTGCCTGGACAAGCGCTTGTTATATAGTCTAGATCTTAGATGTGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAGGGGCATTTGGAATTCCAATAACCTCTTCAAGGGCATGCTTTGATCATGCCATCCTCATCTaGGAGATTCAGATCACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKKGAFGIPITSSRACFDHAILI*EIQITL Trigger: AAGCGTGATCTGAATCTCTCAGATGAGGATGGCATG...ATCAAAGCATGCCCTTGAAGAGGTTATTGGAATTCCAAATGCCCCTTTCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAAAACTGCCCAGGCTGTTaGAGCACCTGCTTCCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKNCPGC*STCFLL Trigger: CAAAAGGAAGCAGGTGCTCCAACAGCCTGGGCAGTT...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | AGCAAGCTTCTGTTAAATGATCCATTAAGTTGGGCTTaGGGCTTCAGACTAGTGAGAGCCTTTGGTCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKLLLNDPLSWA*GFRLVRAFGLH Trigger: GTGTAGACCAAAGGCTCTCACTAGTCTGAAGCCCAAAGCCCAACTTAATGGATCATTTAACAGAAGCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGAAGAAATCGTCCCTaGGTCCTCCTTGCTATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTRRNRP*VLLAIG Trigger: ACCTATAGCAAGGAGGACTCAGGGACGATTTCTTCT...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCGCAACACATTCTTTCTaGTCCCTACTAGCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTATHSF*SLLAAA Trigger: TGCTGCTGCTAGTAGGGAGCAGAAAGAATGTGTTGC...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | ATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTGTGAAACCTCCTTGCTATAGGTaGGCGCCATCTTGTTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MKHIQVKRFTSPTPSIVKPPCYR*APSCFG Trigger: ACCAAAACAAGATGGCGCGCACCTATAGCAAGGAGG...TTTCACAATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | AAGGTCTCCCAAGGTCTTTTCTCATTGATGGTTTACTaGGATACAGAGTATGAGCCTCTGATTTGGAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSQGLFSLMVY*DTEYEPLIWSV Trigger: GACACTCCAAATCAGAGGCTCATACTCTGTATCCAAGTAAACCATCAATGAGAAAAGACCTTGGGAGACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | TATGTCACTCTTTCGTCTGAATTGAAACATTGCCTATaGGTGAGAGGAAGGAAACCCAGAAGACTCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVTLSSELKHCL*VRGRKPRRLQK Trigger: CTTCTGGAGTCTTCTGGGTTTCCTTCCTCTCACCAATAGGCAATGTTTCAATTCAGACGAAAGAGTGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCTCGCACTCTTTCATCTaGTTCCTGGCATTCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTSHSFI*FLAFFR Trigger: TCTGAAGAATGCCAGGAAGCAGATGAAAGAGTGCGA...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR GCA 90 bp | TATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCTGGAGTAGCATCAACTaGATCTTCCTCCCATTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YTTQTCTSIFIVVLFTVTWSSIN*IFLPFY Trigger: GTAGAATGGGAGGAAGATGCAGTTGATGCTACTCCA...GGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CCA 90 bp | CTGCACATCCATATTTATTGTTGTACTGTTCACAGTCACCAGGAAATAGGACCAAGCAGCAGCATCCAGTaGAGACTTCAAGTCATTATC | + |
|
Preference number: 4 (lower is better) Translates to: LHIHIYCCTVHSHQEIGPSSSIQ*RLQVII Trigger: GATAATGACTTGAAGTCTCCACTGGATGCTGCTGCT...TGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | TTTTCCCATTTCAAGGTCTCCCAAGGTCTTTTCTCATaGATGGTTTACTTGGATACAGAGTATGAGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSHFKVSQGLFS*MVYLDTEYEPL Trigger: CAGAGGCTCATACTCTGTATCCAAGTAAACCATCAATGAGAAAAGACCTTGGGAGACCTTGAAATGGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR TCA 90 bp | AGGCTCATGAAGCATATACAAGTTAAGAGATTCACAAGCCCCACTCCTAGCATTTGTTGGCACCAAAATTaGCTAGAAATGAGATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLMKHIQVKRFTSPTPSICWHQN*LEMRCN Trigger: ATTGCATCTCATTTCTAGTCAATTTTGGTGCCAACA...AATGCTAGGAGTGGGGCTTGTGAATCTCTTAACTTGTATATGCTTCATGAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CCA 90 bp | AGTCAATATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACACAAGAACACTTCCAGTaGAGTAGCATCAACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SQYTTQTCTSIFIVVLFTQEHFQ*SSINCI Trigger: GATGCAGTTGATGCTACTCCACTGGAAGTGTTCTTG...TGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATTGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | AATATACCACACAGACCTGCACATCCATATTTATTGTaGTACTGTTCACAGTCACCAGGAAATAGGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NIPHRPAHPYLL*YCSQSPGNRTS Trigger: ACTGGTCCTATTTCCTGGTGACTGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| 3UTR CAA 72 bp | ATACTCCTGTTAAGTAACTCCAAAACCTTCATGGTTTaGAGCTCAACTTGGATAGAATTGTTCCTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLSNSKTFMV*SSTWIELFLCS Trigger: AGAACAAAGGAACAATTCTATCCAAGTTGAGCTCAAAACCATGAAGGTTTTGGAGTTACTTAACAGGAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CAA 90 bp | GAAAGCCCAAACTGTTTCCAGGTTCGAATTCTCAGTGCCTCTCTCCTTGGCTGGTGCACAGTGGCAGCCTaGTCCAGGAGAGCAACACAT | + |
|
Preference number: 5 (lower is better) Translates to: ESPNCFQVRILSASLLGWCTVAA*SRRATH Trigger: ATGTGTTGCTCTCCTGGACAAGGCTGCCACTGTGCA...CCAGCCAAGGAGAGAGGCACTGAGAATTCGAACCTGGAAACAGTTTGGGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 90 bp | GCCTGTTCCTTCAGTCTGGTGACTCTTTTGGGGTTCATGGTGTTCTaGACAGTGGCAGCCTTGTCCAGGAGAGCAACACATTCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ACSFSLVTLLGFMVF*TVAALSRRATHSFC Trigger: GCAGAAAGAATGTGTTGCTCTCCTGGACAAGGCTGCCACTGTGCAGAACACCATGAACCCCAAAAGAGTCACCAGACTGAAGGAACAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 90 bp | TACTATGGGAAGAAGAAATCGTCCCTGAGTCCTCCTTGCTATAGGTaGGCGCCATCTTGTTTTGGTGCCTCTCCTGAAGCCGTTCGCACT | + |
|
Preference number: 5 (lower is better) Translates to: YYGKKKSSLSPPCYR*APSCFGASPEAVRT Trigger: AGTGCGAACGGCTTCAGGAGAGGCACCAAAACAAGATGGCGCGCACCTATAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 90 bp | GCACTAAGGACTTTCTTCCTGGGGCCCAGCTGCATGTGGATATTCTaGAGGTCCTCATCAGAGCAAAGCAGCAGAGCCTCTAGATCAATC | + |
|
Preference number: 5 (lower is better) Translates to: ALRTFFLGPSCMWIF*RSSSEQSSRASRSI Trigger: GATTGATCTAGAGGCTCTGCTGCTTTGCTCTGATGAGGACCTTCAGAATATCCACATGCAGCTGGGCCCCAGGAAGAAAGTCCTTAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 90 bp | ATCTTCCTCCCATTCTACTTCTTCTTCATCCCAAGGAAGATCACCTaGAGTGCCGTTTGCCTCTCTCTTCTCCTCCTCTTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLPFYFFFIPRKIT*SAVCLSLLLLFLLL Trigger: GAGGAGGAGGAAGAGGAGGAGAAGAGAGAGGCAAACGGCACTGCAGGTGATCTTCCTTGGGATGAAGAAGAAGTAGAATGGGAGGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 90 bp | TTCTGCACAGTGGCAGCCTTGTCCAGGAGAGCAACACATTCTTTCTaGTCCCTACTAGCAGCAGCATCCAGTGGAGACTTCAAGTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: FCTVAALSRRATHSF*SLLAAASSGDFKSL Trigger: TAATGACTTGAAGTCTCCACTGGATGCTGCTGCTAGTAGGGAGCAGAAAGAATGTGTTGCTCTCCTGGACAAGGCTGCCACTGTGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 90 bp | AAGAAACGACCTAGACAAGGTACTATGGGAAGAAGAAATCGTCCCTaGGTCCTCCTTGCTATAGGTGCGCGCCATCTTGTTTTGGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KKRPRQGTMGRRNRP*VLLAIGARHLVLVP Trigger: AGGCACCAAAACAAGATGGCGCGCACCTATAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTACCTTGTCTAGGTCGTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 90 bp | CAGGTGCTGAGACTGCAAGAACACTTCCAGTGGAGTAGCATCAACTaGATCTTCCTCCCATTCTACTTCTTCTTCATCCCAAGGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: QVLRLQEHFQWSSIN*IFLPFYFFFIPRKI Trigger: GATCTTCCTTGGGATGAAGAAGAAGTAGAATGGGAGGAAGATGCAGTTGATGCTACTCCACTGGAAGTGTTCTTGCAGTCTCAGCACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CAA 90 bp | AGTCAATATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACACACCTGCAGTGCCGTTaGCCTCTCTCTTCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQYTTQTCTSIFIVVLFTHLQCR*PLSSPP Trigger: AGGAGGAGAAGAGAGAGGCAAACGGCACTGCAGGTG...TGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 90 bp | GAGACTTCAAGTCATTATCCAGGGCAAAGATGTTGGCACCAAAATTaGCTAGAAATGAGATGCAATGAGTGTGGCCATTGGAGGCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ETSSHYPGQRCWHQN*LEMRCNECGHWRLH Trigger: ATGCAGCCTCCAATGGCCACACTCATTGCATCTCATTTCTAGTCAATTTTGGTGCCAACATCTTTGCCCTGGATAATGACTTGAAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 90 bp | TCAATCTGTTCTCTCATAAAAATGGGAAGGAATTCCTCCAGGTGCTaGGACTGCAAGAACACTTCCAGTGGAGTAGCATCAACTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SICSLIKMGRNSSRC*DCKNTSSGVASTAS Trigger: AGATGCAGTTGATGCTACTCCACTGGAAGTGTTCTTGCAGTCTCAGCACCTGGAGGAATTCCTTCCCATTTTTATGAGAGAACAGATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CAA 90 bp | AGTCAATATACCACACAGACCTGCACATCCATATTTATTGTTGTACTGTTCACAAAACCCAACTCCCTCTaGCTGTCAGAGATGTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQYTTQTCTSIFIVVLFTKPNSL*LSEMSS Trigger: TGAGGACATCTCTGACAGCAAGAGGGAGTTGGGTTT...TGTGAACAGTACAACAATAAATATGGATGTGCAGGTCTGTGTGGTATATTGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CAA 90 bp | GCAAAGAAAGGGGCATTTGGAATTCCAATAACCTCTTCAAGGGCATGCTTTGATGAGAATAGACTCATGTaGTACATCATCATCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AKKGAFGIPITSSRACFDENRLM*YIIIFF Trigger: GAAGAAGATGATGATGTACAACATGAGTCTATTCTC...ATCAAAGCATGCCCTTGAAGAGGTTATTGGAATTCCAAATGCCCCTTTCTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS-3UTR CAA 90 bp | AAACATGGGTGTGCAAAATATACTTTCACCATCAACCTTCCTAAAACTATACCTAAATGGAGCTTCTCTTaGAAGTCCTTTGGAAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHGCAKYTFTINLPKTIPKWSFS*KSFGNE Trigger: CTCATTTCCAAAGGACTTCAAAGAGAAGCTCCATTT...AGGTATAGTTTTAGGAAGGTTGATGGTGAAAGTATATTTTGCACACCCATGTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 72 bp | GGCTGCCAGGAGAGTGGGTGTCATGCCATCCTCATCTaGGAGATTCAGATCACGCTTGGTGGCCTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GCQESGCHAILI*EIQITLGGLLQ Trigger: CTGAAGGAGGCCACCAAGCGTGATCTGAATCTCTCAGATGAGGATGGCATGACACCCACTCTCCTGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | GGTTGCCGTGGTAGGCTGCCAGGAGAGTGGGTGTCATaGCATCCTCATCTGAGAGATTCAGATCACGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GCRGRLPGEWVS*HPHLRDSDHAW Trigger: CCAAGCGTGATCTGAATCTCTCAGATGAGGATGGCATGACACCCACTCTCCTGGCAGCCTACCACGGCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 90 bp | CTGGTGTCAACCAACTGCCCAGGCTGTTGGAGCACCTGCTTCCTTTaGTCTATGGCACTAAGGACTTTCTTCCTGGGGCCCAGCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LVSTNCPGCWSTCFL*SMALRTFFLGPSCM Trigger: CATGCAGCTGGGCCCCAGGAAGAAAGTCCTTAGTGCCATAGACAAAAGGAAGCAGGTGCTCCAACAGCCTGGGCAGTTGGTTGACACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 72 bp | ACCAACTGCCCAGGCTGTTGGAGCACCTGCTTCCTTTaGTCTATGGCACTAAGGACTTTCTTCCTGGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TNCPGCWSTCFL*SMALRTFFLGP Trigger: GGGCCCCAGGAAGAAAGTCCTTAGTGCCATAGACAAAAGGAAGCAGGTGCTCCAACAGCCTGGGCAGTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | GTGGCAGCCTTGTCCAGGAGAGCAACACATTCTTTCTaGTCCCTACTAGCAGCAGCATCCAGTGGAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: VAALSRRATHSF*SLLAAASSGDF Trigger: GAAGTCTCCACTGGATGCTGCTGCTAGTAGGGAGCAGAAAGAATGTGTTGCTCTCCTGGACAAGGCTGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 72 bp | CTTCTTCATCCCAAGGAAGATCACCTGCAGTGCCGTTaGCCTCTCTCTTCTCCTCCTCTTCCTCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLHPKEDHLQCR*PLSSPPLPPPP Trigger: AGGAGGAGGAGGAAGAGGAGGAGAAGAGAGAGGCAAACGGCACTGCAGGTGATCTTCCTTGGGATGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CCA 72 bp | TGCCATCCTCATCTGAGAGATTCAGATCACGCTTGGTaGCCTCCTTCAGAAGTTCCAGGTAGCTGTCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: CHPHLRDSDHAW*PPSEVPGSCHS Trigger: CGAGTGACAGCTACCTGGAACTTCTGAAGGAGGCCACCAAGCGTGATCTGAATCTCTCAGATGAGGATGGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | TTCAGTCTGGTGACTCTTTTGGGGTTCATGGTGTTCTaGACAGTGGCAGCCTTGTCCAGGAGAGCAACACAT | + |
|
Preference number: 6 (lower is better) Translates to: FSLVTLLGFMVF*TVAALSRRATH Trigger: ATGTGTTGCTCTCCTGGACAAGGCTGCCACTGTGCAGAACACCATGAACCCCAAAAGAGTCACCAGACTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | CTGGTGTCAACCAACTGCCCAGGCTGTTGGAGCACCTaGTTCCTTTTGTCTATGGCACTAAGGACTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVSTNCPGCWST*FLLSMALRTFF Trigger: GAAGAAAGTCCTTAGTGCCATAGACAAAAGGAAGCAGGTGCTCCAACAGCCTGGGCAGTTGGTTGACACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 72 bp | CCTAGACAAGGTACTATGGGAAGAAGAAATCGTCCCTaGGTCCTCCTTGCTATAGGTGCGCGCCATCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PRQGTMGRRNRP*VLLAIGARHLV Trigger: AACAAGATGGCGCGCACCTATAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTACCTTGTCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | TACTATGGGAAGAAGAAATCGTCCCTGAGTCCTCCTTaGTATAGGTGCGCGCCATCTTGTTTTGGTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YYGKKKSSLSPP*YRCAPSCFGAS Trigger: AGAGGCACCAAAACAAGATGGCGCGCACCTATAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS GCA 72 bp | CCATTCTACTTCTTCTTCATCCCAAGGAAGATCACCTaGAGTGCCGTTTGCCTCTCTCTTCTCCTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PFYFFFIPRKIT*SAVCLSLLLLF Trigger: GAAGAGGAGGAGAAGAGAGAGGCAAACGGCACTGCAGGTGATCTTCCTTGGGATGAAGAAGAAGTAGAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CCA 72 bp | TTCCTCCAGGTGCTGAGACTGCAAGAACACTTCCAGTaGAGTAGCATCAACTGCATCTTCCTCCCATTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FLQVLRLQEHFQ*SSINCIFLPFY Trigger: GTAGAATGGGAGGAAGATGCAGTTGATGCTACTCCACTGGAAGTGTTCTTGCAGTCTCAGCACCTGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 72 bp | TCTCTCATAAAAATGGGAAGGAATTCCTCCAGGTGCTaGGACTGCAAGAACACTTCCAGTGGAGTAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SLIKMGRNSSRC*DCKNTSSGVAS Trigger: TGATGCTACTCCACTGGAAGTGTTCTTGCAGTCTCAGCACCTGGAGGAATTCCTTCCCATTTTTATGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CCA 72 bp | ACATTCTTTCTGCTCCCTACTAGCAGCAGCATCCAGTaGAGACTTCAAGTCATTATCCAGGGCAAAGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: TFFLLPTSSSIQ*RLQVIIQGKDV Trigger: AACATCTTTGCCCTGGATAATGACTTGAAGTCTCCACTGGATGCTGCTGCTAGTAGGGAGCAGAAAGAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 72 bp | AATAGCTCACTGGGCATTTTAAAACCCAACTCCCTCTaGCTGTCAGAGATGTCCTCAAAGTCCAGTACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSLGILKPNSL*LSEMSSKSSTL Trigger: CAGAGTACTGGACTTTGAGGACATCTCTGACAGCAAGAGGGAGTTGGGTTTTAAAATGCCCAGTGAGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CCA 72 bp | GAAGTAGTTGAAAGAAACGACCTAGACAAGGTACTATaGGAAGAAGAAATCGTCCCTGAGTCCTCCTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: EVVERNDLDKVL*EEEIVPESSLL Trigger: TAGCAAGGAGGACTCAGGGACGATTTCTTCTTCCCATAGTACCTTGTCTAGGTCGTTTCTTTCAACTACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CCA 72 bp | TCTTCTTCTTCAACTGTTCCTGCTGCTCCTTGTCTTTaGAATAGCTCACTGGGCATTTTAAAACCCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSTVPAAPCL*NSSLGILKPNS Trigger: GGAGTTGGGTTTTAAAATGCCCAGTGAGCTATTCCAAAGACAAGGAGCAGCAGGAACAGTTGAAGAAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 90 bp | TGTCTTTGGAATAGCTCACTGGGCATTTTAAAACCCAACTCCCTCTaGCTGTCAGAGATGTCCTCAAAGTCCAGTACTCTGTTTCTACTA | + |
|
Preference number: 6 (lower is better) Translates to: CLWNSSLGILKPNSL*LSEMSSKSSTLFLL Trigger: TAGTAGAAACAGAGTACTGGACTTTGAGGACATCTCTGACAGCAAGAGGGAGTTGGGTTTTAAAATGCCCAGTGAGCTATTCCAAAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS TCA 72 bp | AGTCATTATCCAGGGCAAAGATGTTGGCACCAAAATTaGCTAGAAATGAGATGCAATGAGTGTGGCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SHYPGQRCWHQN*LEMRCNECGHW Trigger: CCAATGGCCACACTCATTGCATCTCATTTCTAGTCAATTTTGGTGCCAACATCTTTGCCCTGGATAATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 90 bp | AGTACTCTGTTTCTACTAAAAACAATACTTCCTAGACCCGGACGGTaGAGAATAGACTCATGTTGTACATCATCATCTTCTTCTACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: STLFLLKTILPRPGR*RIDSCCTSSSSSTE Trigger: CTCAGTAGAAGAAGATGATGATGTACAACATGAGTCTATTCTCAACCGTCCGGGTCTAGGAAGTATTGTTTTTAGTAGAAACAGAGTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||
| CDS CAA 72 bp | TTTCTACTAAAAACAATACTTCCTAGACCCGGACGGTaGAGAATAGACTCATGTTGTACATCATCATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FLLKTILPRPGR*RIDSCCTSSSS Trigger: AGAAGATGATGATGTACAACATGAGTCTATTCTCAACCGTCCGGGTCTAGGAAGTATTGTTTTTAGTAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033201.7 |
||