Pregenerated sensors for ANKRD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037904Ensembl transcript IDs: ENSMUST00000043459.13, ENSMUST00000128353.8, ENSMUST00000135131.2, ENSMUST00000140788.8, ENSMUST00000142012.2, ENSMUST00000148765.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTaGCTGAGCAGCGAGTTCGCACACTTGAGCAACTTGGCAGCCCTA | + |
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Preference number: 1 (lower is better) Translates to: SAVTFPGTLGPHPYP*LSSEFAHLSNLAAL Trigger: TAGGGCTGCCAAGTTGCTCAAGTGTGCGAACTCGCTGCTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR GCA 90 bp | AACCACACAAGCTTGTCCCCTTGGCCTCAGCACATTCTGTCCTCTTaGTTGGTCATTAGAGTCCCCACCCTCTGTTCCTGTTCCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: NHTSLSPWPQHILSS*LVIRVPTLCSCSSP Trigger: AGGAGAGGAACAGGAACAGAGGGTGGGGACTCTAATGACCAAGCAAGAGGACAGAATGTGCTGAGGCCAAGGGGACAAGCTTGTGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGTGGCCCAGCACCCTGGACATTCCCACCCCCGGGCATGCTGTACTCAGGGCCATCCCTGGGGCTaGGCAGGGGGACCTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: PPVAQHPGHSHPRACCTQGHPWG*AGGPGR Trigger: CCTTCCAGGTCCCCCTGCCCAGCCCCAGGGATGGCC...CTGAGTACAGCATGCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACAGGAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGGACAGGTGGCAAAGTCTAGGGCCCTCTGTTCTCTGGGCTTCCCCTCCTGTGGCCCAGCACCCTaGACATTCCCACCCCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: GPGQVAKSRALCSLGFPSCGPAP*TFPPPG Trigger: GCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACA...GGAGGGGAAGCCCAGAGAACAGAGGGCCCTAGACTTTGCCACCTGTCCTGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGTGGCCCAGCACCCTGGACATTCCCACCCCCGGGCATGCTGTACTCAGAACTCCAGGCTGGGGTaGAGAAGCAATGATTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: PPVAQHPGHSHPRACCTQNSRLG*RSNDSV Trigger: CACTGAATCATTGCTTCTCCACCCCAGCCTGGAGTT...CTGAGTACAGCATGCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR CAA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTaGGCTGAGCAGCGAGTTCGCACACTTGAGCAACTTGGCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSCHLPRDSRSSPLS*AEQRVRTLEQLGSP Trigger: AGGGCTGCCAAGTTGCTCAAGTGTGCGAACTCGCTGCTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCCTGTGGGGAAGCAGGTGGGGAAACCCAAGGCTAGCACCTGCCAAGTCCTGTTCCTCTCCTGCTTaGCTCAGCTGTCACCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QSLWGSRWGNPRLAPAKSCSSPA*LSCHLP Trigger: GGGAAGGTGACAGCTGAGCCAAGCAGGAGAGGAACA...GGACTTGGCAGGTGCTAGCCTTGGGTTTCCCCACCTGCTTCCCCACAGGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCCTTGACAATAACACGGGTCCAGGACAGGTGGCAAAGTCTAGGGCCCTCTGGGCTTCCCCTCCTGTaGCCCAGCACCCTGGACATT | + |
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Preference number: 2 (lower is better) Translates to: NPLTITRVQDRWQSLGPSGLPLL*PSTLDI Trigger: AATGTCCAGGGTGCTGGGCCACAGGAGGGGAAGCCC...AGAGGGCCCTAGACTTTGCCACCTGTCCTGGACCCGTGTTATTGTCAAGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR GCA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGTTCCTGTTCCTCTCCTaGTTGGCTCAGCTGTCACCT | + |
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Preference number: 2 (lower is better) Translates to: HSLAPIQHLLELPAQLCWFLFLS*LAQLSP Trigger: AGGTGACAGCTGAGCCAAGCAGGAGAGGAACAGGAA...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGACAAGCTTGTCCCCTTaGCCTCAGCACATTCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: HSLAPIQHLLELPAQLCWTSLSP*PQHILS Trigger: GGACAGAATGTGCTGAGGCCAAGGGGACAAGCTTGT...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGTTCTGTCCTCTTGCTTaGTCATTAGAGTCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: HSLAPIQHLLELPAQLCWFCPLA*SLESPP Trigger: GGGTGGGGACTCTAATGACCAAGCAAGAGGACAGAA...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTTTGCAGCCAGGGCCCCTTTATCCTGAAGGATGAGGGTGCATTCATTAACCCTGCTCAGCTCTGCTaGACACACATCAGTCCAACC | + |
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Preference number: 2 (lower is better) Translates to: QLCSQGPFILKDEGAFINPAQLC*THISPT Trigger: GGTTGGACTGATGTGTGTCCAGCAGAGCTGAGCAGG...GTTAATGAATGCACCCTCATCCTTCAGGATAAAGGGGCCCTGGCTGCAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAGAAAGCAGCATTCCAAGGATGGGTGAGAAGCCTATCCAGGGTGATAACGGGCCAACTCCAGGCTaGGGTGGAGAAGCAATGATT | + |
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Preference number: 2 (lower is better) Translates to: PAESSIPRMGEKPIQGDNGPTPG*GGEAMI Trigger: AATCATTGCTTCTCCACCCCAGCCTGGAGTTGGCCC...GTTATCACCCTGGATAGGCTTCTCACCCATCCTTGGAATGCTGCTTTCTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACTGAGGGTAAAAGGGCCAACTCCAGGCTGGGGTGGAGAAGCAATGATTCACATCAGTCCAACCCATaGGCCATTTATGAGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LTEGKRANSRLGWRSNDSHQSNP*AIYEAD Trigger: GTCAGCCTCATAAATGGCCCATGGGTTGGACTGATG...TGAATCATTGCTTCTCCACCCCAGCCTGGAGTTGGCCCTTTTACCCTCAGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCCTGTGGGGAAGCAGGTGGGGAAACCCAAGGCTAGCACCTGCCAAGTCCTCCATATATGTAAAGTaGCAAGTACAATGCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QSLWGSRWGNPRLAPAKSSIYVK*QVQCSQ Trigger: TTGAGAGCATTGTACTTGGCACTTTACATATATGGA...GGACTTGGCAGGTGCTAGCCTTGGGTTTCCCCACCTGCTTCCCCACAGGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTTGCAGCCAGGGCCCCTTTATCCTGAAGGATGAGGGTGCATTCATTAACCACATTCTGTCCTCTTaGTTGGTCATTAGAGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: QLCSQGPFILKDEGAFINHILSS*LVIRVP Trigger: GGGGACTCTAATGACCAAGCAAGAGGACAGAATGTG...GTTAATGAATGCACCCTCATCCTTCAGGATAAAGGGGCCCTGGCTGCAAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATAACACGGGTCTGTGGGGAAGCAGGTaGGGAAACCCAAGGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSFSGLGNGLKSLDNNTGLWGSR*GNPRLA Trigger: TGCTAGCCTTGGGTTTCCCCACCTGCTTCCCCACAG...ACCCGTGTTATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTTGCAGCCAGGGCCCCTTTATCCTGAAGGATGAGGGTGCATTCATTAACAGCAATGATTCAGTGTaGGATGAGAACACAGACACA | + |
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Preference number: 2 (lower is better) Translates to: QLCSQGPFILKDEGAFINSNDSV*DENTDT Trigger: TGTGTCTGTGTTCTCATCTCACACTGAATCATTGCT...GTTAATGAATGCACCCTCATCCTTCAGGATAAAGGGGCCCTGGCTGCAAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATAACACGGGTCCAGGACAGCTATGCCACAAAGGTTaGATTTCACAGCCCAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: SGLGNGLKSLDNNTGPGQLCHKG*ISQPSK Trigger: TTTGCTGGGCTGTGAAATTCAACCTTTGTGGCATAG...CTGTCCTGGACCCGTGTTATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAGTACCCTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATCAGCACATCATGGCCTaGAAGCCTATGCCACAAAGG | + |
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Preference number: 2 (lower is better) Translates to: ASTLSFSGLGNGLKSLDNQHIMA*KPMPQR Trigger: CCTTTGTGGCATAGGCTTGCAGGCCATGATGTGCTG...ATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAGGGTACTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR TCA 72 bp | GGACGGGCCCTCCCCCAGTCTCAAAGTTCCCTGGTATaGACCCAGCTTTGCAGCCAGGGCCCCTTTATCCTG | + |
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Preference number: 3 (lower is better) Translates to: GRALPQSQSSLV*TQLCSQGPFIL Trigger: CAGGATAAAGGGGCCCTGGCTGCAAAGCTGGGTTCATACCAGGGAACTTTGAGACTGGGGGAGGGCCCGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGTCCTCACCCTTATCCTaGGCTGAGCAGCGAGTTCGC | + |
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Preference number: 3 (lower is better) Translates to: HSLAPIQHLLELPAQLCWSSPLS*AEQRVR Trigger: GCGAACTCGCTGCTCAGCCAAGGATAAGGGTGAGGA...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTGGCTGAGAGCGAGTTCGCACACTaGAGCAACTTGGCAGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: LSCHLPRDSRSSPLSLAESEFAH*SNLAAL Trigger: TAGGGCTGCCAAGTTGCTCAAGTGTGCGAACTCGCT...CTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CAA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGCAAAACCACACAAGCTaGTCCCCTTGGCCTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: HSLAPIQHLLELPAQLCWQNHTS*SPWPQH Trigger: GTGCTGAGGCCAAGGGGACAAGCTTGTGTGGTTTTG...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR GCA 72 bp | CCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTaGTGGACACACATCAGTCCAACCCATGGGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: PIQHLLELPAQL*WTHISPTHGPF Trigger: AAATGGCCCATGGGTTGGACTGATGTGTGTCCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR GCA 72 bp | ACAGCTAGCCTCTGCTCCTGGCAGCACATCATGGCCTaGAAGCCTATGCCACAAAGGTTGAATTTCACAGCC | + |
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Preference number: 3 (lower is better) Translates to: TASLCSWQHIMA*KPMPQRLNFTA Trigger: GGCTGTGAAATTCAACCTTTGTGGCATAGGCTTGCAGGCCATGATGTGCTGCCAGGAGCAGAGGCTAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR CCA 72 bp | TGTCCCCTTGGCCTCAGCACATTCTGTCCTCTTGCTTaGTCATTAGAGTCCCCACCCTCTGTTCCTGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CPLGLSTFCPLA*SLESPPSVPVP Trigger: AGGAACAGGAACAGAGGGTGGGGACTCTAATGACCAAGCAAGAGGACAGAATGTGCTGAGGCCAAGGGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR-3UTR CAA 90 bp | AATCCCTTGACAATAACACGGGTCCAGGACAGGTGGCAAAGTCTAGGGCCCTCTGCACACTTGAGCAACTaGGCAGCCCTACCCCAAATA | + |
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Preference number: 3 (lower is better) Translates to: NPLTITRVQDRWQSLGPSAHLSN*AALPQI Trigger: TATTTGGGGTAGGGCTGCCAAGTTGCTCAAGTGTGC...AGAGGGCCCTAGACTTTGCCACCTGTCCTGGACCCGTGTTATTGTCAAGGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR TCA 72 bp | GATGAGGGTGCATTCATTAACAAGCCTCCCGGCTTCTaGAGTGTCCAGCAGAAAGCAGCATTCCAAGGATGG | + |
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Preference number: 3 (lower is better) Translates to: DEGAFINKPPGF*SVQQKAAFQGW Trigger: CCATCCTTGGAATGCTGCTTTCTGCTGGACACTTCAGAAGCCGGGAGGCTTGTTAATGAATGCACCCTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CCTCCTGTGGCCCAGCACCCTGGACATTCCCACCCCCGGGCATGCTGTACTCAGGAGGCACTCGGGGCGTaGGAGCTCACAGGCCACATG | + |
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Preference number: 4 (lower is better) Translates to: PPVAQHPGHSHPRACCTQEALGA*ELTGHM Trigger: CATGTGGCCTGTGAGCTCGCACGCCCCGAGTGCCTC...CTGAGTACAGCATGCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CCTCCTGTGGCCCAGCACCCTGGACATTCCCACCCCCGGGCATGCTGTACTCAGGGGTGGCGCCAGCCCTaGCAGCCACTGGAACTTGTC | + |
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Preference number: 4 (lower is better) Translates to: PPVAQHPGHSHPRACCTQGWRQP*QPLELV Trigger: GACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCC...CTGAGTACAGCATGCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACAGGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR TCA 90 bp | CCTCCTGTGGCCCAGCACCCTGGACATTCCCACCCCCGGGCATGCTGTACTCAGAGCAGCAGGCGGCGCTaGCACACCTCCTCAGACGAA | + |
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Preference number: 4 (lower is better) Translates to: PPVAQHPGHSHPRACCTQSSRRR*HTSSDE Trigger: TTCGTCTGAGGAGGTGTGTCAGCGCCGCCTGCTGCT...CTGAGTACAGCATGCCCGGGGGTGGGAATGTCCAGGGTGCTGGGCCACAGGAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | AATCCCTTGACAATAACACGGGTCCAGGACAGGTGGCAAAGTCTAGGGCCCTCTCGCCCTCCACGCGGCTaGAGCCACGGCGGTCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: NPLTITRVQDRWQSLGPSRPPRG*SHGGRG Trigger: TCCTCGACCGCCGTGGCTGCAGCCGCGTGGAGGGCG...AGAGGGCCCTAGACTTTGCCACCTGTCCTGGACCCGTGTTATTGTCAAGGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTGGCTGAGCACGCGCTCTTCCACTaGGAAGTCCTGCACCGTTCG | + |
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Preference number: 4 (lower is better) Translates to: LSCHLPRDSRSSPLSLAEHALFH*EVLHRS Trigger: CGAACGGTGCAGGACTTCCCAGTGGAAGAGCGCGTG...CTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTGGCTGAGGATGACTTCCGGCACTaGTTCTGCACCCGCAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: LSCHLPRDSRSSPLSLAEDDFRH*FCTRKR Trigger: TCGCTTGCGGGTGCAGAAGCAGTGCCGGAAGTCATC...CTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | TGGCCTCAGCACATTCTGTCCTCTTGCTTGGTCATTAGAGTCCCCACCCTCTGTGGATGCGCCGCAGGATaGCCACGCGGTTGTAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: WPQHILSSCLVIRVPTLCGCAAG*PRGCSA Trigger: TGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCC...ACAGAGGGTGGGGACTCTAATGACCAAGCAAGAGGACAGAATGTGCTGAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | GGAGAAGCAATGATTCAGTGTGAGATGAGAACACAGACACACAGTCTGGCTCCCCCACATGCAGCGACGTaGCACCGCCCTCCACGCGGC | + |
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Preference number: 4 (lower is better) Translates to: GEAMIQCEMRTQTHSLAPPHAAT*HRPPRG Trigger: GCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGG...GGGAGCCAGACTGTGTGTCTGTGTTCTCATCTCACACTGAATCATTGCTTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR CCA 90 bp | AGAACACAGACACACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTGACAAAGAGGGAGGGTaGCGCCAGCCCTGCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RTQTHSLAPIQHLLELPADKEGG*RQPCQP Trigger: TGGCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGTC...AGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTGTGTCTGTGTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTGGCTGAGGTAGAAGGCGAAGGATaGCTTCCGGCACTGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSCHLPRDSRSSPLSLAEVEGEG*LPALLL Trigger: CAGAAGCAGTGCCGGAAGTCATCCTTCGCCTTCTAC...CTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CAGCTTTGCAGCCAGGGCCCCTTTATCCTGAAGGATGAGGGTGCATTCATTAACAGCTCACAGGCCACATaGAGCGACGTGCCACCGCCC | + |
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Preference number: 4 (lower is better) Translates to: QLCSQGPFILKDEGAFINSSQAT*SDVPPP Trigger: GGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGCT...GTTAATGAATGCACCCTCATCCTTCAGGATAAAGGGGCCCTGGCTGCAAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CTGACTGAGGGTAAAAGGGCCAACTCCAGGCTGGGGTGGAGAAGCAATGATTCAGTGAGGTCCAAGGGCTaGAAAAACGATGGCAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LTEGKRANSRLGWRSNDSVRSKG*KNDGRG Trigger: GCCTCTGCCATCGTTTTTGCAGCCCTTGGACCTCAC...TGAATCATTGCTTCTCCACCCCAGCCTGGAGTTGGCCCTTTTACCCTCAGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR CAA 72 bp | TTGTCCCCTTGGCCTCAGCACATTCTGTCCTCTTGCTaGGTCATTAGAGTCCCCACCCTCTGTTCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LSPWPQHILSSC*VIRVPTLCSCS Trigger: GGAACAGGAACAGAGGGTGGGGACTCTAATGACCAAGCAAGAGGACAGAATGTGCTGAGGCCAAGGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR TCA 90 bp | CTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATAACACGGGTTGGCGGTGGCAGCATTaGCCGTGGCAGAAGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LSFSGLGNGLKSLDNNTGWRWQH*PWQKLP Trigger: AGGCAGCTTCTGCCACGGTCAATGCTGCCACCGCCA...ACCCGTGTTATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| 3UTR CAA 72 bp | CAGCACATCATGGCCTGCAAGCCTATGCCACAAAGGTaGAATTTCACAGCCCAGCAAAATCCCAGGATAGGG | + |
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Preference number: 4 (lower is better) Translates to: QHIMACKPMPQR*NFTAQQNPRIG Trigger: CCCTATCCTGGGATTTTGCTGGGCTGTGAAATTCAACCTTTGTGGCATAGGCTTGCAGGCCATGATGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR CCA 90 bp | GCAAGTACCCTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATCCTGGAGAAGCTCCGTaGCCAAGCAGCAGAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASTLSFSGLGNGLKSLDNPGEAP*PSSRKR Trigger: CCTCTTTCTGCTGCTTGGCCACGGAGCTTCTCCAGG...ATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAGGGTACTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATAACACGGGTAGCCCTGCCAGCCACTaGAACTTGTCCTCACCCAAC | + |
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Preference number: 4 (lower is better) Translates to: LSFSGLGNGLKSLDNNTGSPASH*NLSSPN Trigger: GTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCT...ACCCGTGTTATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTTTCAGGCCTAGGAAATGGCCTAAAATCCCTTGACAATAACACGGGTCAGCTGATCTCGCACTaGCAGGTAGAAGGCGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSFSGLGNGLKSLDNNTGQLISH*QVEGEG Trigger: TCCTTCGCCTTCTACCTGGCAGTGCGAGATCAGCTG...ACCCGTGTTATTGTCAAGGGATTTTAGGCCATTTCCTAGGCCTGAAAAAGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS GCA 90 bp | AGAGGCACTCGGGGCGTGCGAGCTCACAGGCCACATGCAGCGACGTaGCACCGCCCTCCACGCGGCTGCAGCCACGGCGGTCGAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RGTRGVRAHRPHAAT*HRPPRGCSHGGRGG Trigger: GCCTCCTCGACCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGCTCGCACGCCCCGAGTGCCTCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 90 bp | GCTCACAGGCCACATGCAGCGACGTGCCACCGCCCTCCACGCGGCTaGAGCCACGGCGGTCGAGGAGGCGCACGCGCTCTTCCACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: AHRPHAATCHRPPRG*SHGGRGGARALPLG Trigger: TCCCAGTGGAAGAGCGCGTGCGCCTCCTCGACCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 90 bp | AGCAGCAGAAAGAGGCACTCGGGGCGTGCGAGCTCACAGGCCACATaGAGCGACGTGCCACCGCCCTCCACGCGGCTGCAGCCACGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SSRKRHSGRASSQAT*SDVPPPSTRLQPRR Trigger: CCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGCTCGCACGCCCCGAGTGCCTCTTTCTGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | GCGGCTGCAGCCACGGCGGTCGAGGAGGCGCACGCGCTCTTCCACTaGGAAGTCCTGCACCGTTCGCAGGATGCGCCGCAGGATGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: AAAATAVEEAHALFH*EVLHRSQDAPQDAH Trigger: GTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAGAGCGCGTGCGCCTCCTCGACCGCCGTGGCTGCAGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 90 bp | GGCGCACGCGCTCTTCCACTGGGAAGTCCTGCACCGTTCGCAGGATaGGCCGCAGGATGCCCACGCGGTTGTAGCGCACCGCCAGCGCCA | + |
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Preference number: 5 (lower is better) Translates to: GARALPLGSPAPFAG*AAGCPRGCSAPPAP Trigger: TGGCGCTGGCGGTGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAGAGCGCGTGCGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 90 bp | CTTCCACTGGGAAGTCCTGCACCGTTCGCAGGATGCGCCGCAGGATaGCCACGCGGTTGTAGCGCACCGCCAGCGCCACGTGAGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LPLGSPAPFAGCAAG*PRGCSAPPAPREAQ Trigger: CTGGGCCTCACGTGGCGCTGGCGGTGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | GGCCTGGTGTCCCACGGCATGCTGGCCTCCGGGAGTCTCAAAGCATaGGTCACACCACCCCAGACCAACCAAGCCGCGCGACCCTGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GLVSHGMLASGSLKA*VTPPQTNQAARPCP Trigger: GGGACAGGGTCGCGCGGCTTGGTTGGTCTGGGGTGGTGTGACCCATGCTTTGAGACTCCCGGAGGCCAGCATGCCGTGGGACACCAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142012.2 |
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| CDS-3UTR CAA 90 bp | CACAGTCTGGCTCCCATTCAACACCTGCTAGAGCTGCCTGCTCAGCTCTGCTGGCCCTCGGGCCCTCCGTaGGCGCTGCGTCCAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: HSLAPIQHLLELPAQLCWPSGPP*ALRPGL Trigger: CAGGCCTGGACGCAGCGCCAACGGAGGGCCCGAGGG...CCAGCAGAGCTGAGCAGGCAGCTCTAGCAGGTGTTGAATGGGAGCCAGACTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS GCA 90 bp | AAGGCCTCCGGGAAGCGGCCAGGTGAGATAGTGGTGACCAACACCTaGATGGCACGGACAAAGAGGGAGGGTGGCGCCAGCCCTGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KASGKRPGEIVVTNT*MARTKREGGASPAS Trigger: GCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGTCCGTGCCATGCAGGTGTTGGTCACCACTATCTCACCTGGCCGCTTCCCGGAGGCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS TCA 90 bp | CCAAACTGGCAGCTGATCTCGCACTGCCAGGTAGAAGGCGAAGGATaGCTTCCGGCACTGCTTCTGCACCCGCAAGCGAGCTGCGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: PNWQLISHCQVEGEG*LPALLLHPQASCAG Trigger: CCCGGCGCAGCTCGCTTGCGGGTGCAGAAGCAGTGCCGGAAGTCATCCTTCGCCTTCTACCTGGCAGTGCGAGATCAGCTGCCAGTTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | ATGGCACGGACAAAGAGGGAGGGTGGCGCCAGCCCTGCCAGCCACTaGAACTTGTCCTCACCCAACAACCGCTGCCAGCGTAGCTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: MARTKREGGASPASH*NLSSPNNRCQRSWS Trigger: AGACCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGTCCGTGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS TCA 90 bp | CCCGGGGTGTACAGTACTAGCAGGTCAAGCAGCAGCAGGCGGCGCTaGCACACCTCCTCAGACGAAGTGGTGTTGGCGGTGGCAGCATTG | + |
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Preference number: 5 (lower is better) Translates to: PGVYSTSRSSSSRRR*HTSSDEVVLAVAAL Trigger: CAATGCTGCCACCGCCAACACCACTTCGTCTGAGGAGGTGTGTCAGCGCCGCCTGCTGCTGCTTGACCTGCTAGTACTGTACACCCCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS-3UTR CAA 90 bp | CAAAGCCTGTGGGGAAGCAGGTGGGGAAACCCAAGGCTAGCACCTGCCAAGTCCTTGGCGGTGGCAGCATaGACCGTGGCAGAAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: QSLWGSRWGNPRLAPAKSLAVAA*TVAEAA Trigger: GGCAGCTTCTGCCACGGTCAATGCTGCCACCGCCAA...GGACTTGGCAGGTGCTAGCCTTGGGTTTCCCCACCTGCTTCCCCACAGGCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS GCA 90 bp | GCCAGCCCTGCCAGCCACTGGAACTTGTCCTCACCCAACAACCGCTaGCAGCGTAGCTGGTCTCCTAGCAGTTCACATCGAGCTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: ASPASHWNLSSPNNR*QRSWSPSSSHRAGP Trigger: AGGTCCAGCTCGATGTGAACTGCTAGGAGACCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | AATAGGCCGCAGCGCGCCCCCGCTCATCACAGTGGAAGGCTTCGCTaGCACGTATGTCCTCGAGTAGCCAAACTGGCAGCTGATCTCGCA | + |
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Preference number: 5 (lower is better) Translates to: NRPQRAPAHHSGRLR*HVCPRVAKLAADLA Trigger: TGCGAGATCAGCTGCCAGTTTGGCTACTCGAGGACATACGTGCCAGCGAAGCCTTCCACTGTGATGAGCGGGGGCGCGCTGCGGCCTATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | AATGGTGTAAAGCCACTGCCATCTCGAAGGCCTGGAGAAGCTCCGTaGCCAAGCAGCAGAAAGAGGCACTCGGGGCGTGCGAGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: NGVKPLPSRRPGEAP*PSSRKRHSGRASSQ Trigger: CTGTGAGCTCGCACGCCCCGAGTGCCTCTTTCTGCTGCTTGGCCACGGAGCTTCTCCAGGCCTTCGAGATGGCAGTGGCTTTACACCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 90 bp | CAACAGCAGCTCCAATGGTGTAAAGCCACTGCCATCTCGAAGGCCTaGAGAAGCTCCGTGGCCAAGCAGCAGAAAGAGGCACTCGGGGCG | + |
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Preference number: 5 (lower is better) Translates to: QQQLQWCKATAISKA*RSSVAKQQKEALGA Trigger: CGCCCCGAGTGCCTCTTTCTGCTGCTTGGCCACGGAGCTTCTCCAGGCCTTCGAGATGGCAGTGGCTTTACACCATTGGAGCTGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCTGTCACCTTCCCCGGGACTCTAGGTCCTCACCCTTATCCTTGGCTGAGGCCAGCCACTGGAACTaGTCCTCACCCAACAACCGC | + |
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Preference number: 5 (lower is better) Translates to: LSCHLPRDSRSSPLSLAEASHWN*SSPNNR Trigger: GCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGC...CTCAGCCAAGGATAAGGGTGAGGACCTAGAGTCCCGGGGAAGGTGACAGCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS-3UTR CAA 90 bp | CTGACTGAGGGTAAAAGGGCCAACTCCAGGCTGGGGTGGAGAAGCAATGATTCAGTAGTGTGCATAGGCTaGGTGGTCGTGCACAAGCGC | + |
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Preference number: 5 (lower is better) Translates to: LTEGKRANSRLGWRSNDSVVCIG*VVVHKR Trigger: GCGCTTGTGCACGACCACCAAGCCTATGCACACTAC...TGAATCATTGCTTCTCCACCCCAGCCTGGAGTTGGCCCTTTTACCCTCAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128353.8 |
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| CDS GCA 72 bp | CGGGGCGTGCGAGCTCACAGGCCACATGCAGCGACGTaGCACCGCCCTCCACGCGGCTGCAGCCACGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: RGVRAHRPHAAT*HRPPRGCSHGG Trigger: ACCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGCTCGCACGCCCCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | GAGCTGCGCCGGGACCCTCGGGCCCTCCGTTGGCGCTaGGTCCAGGCCTGGTGTCCCACGGCATGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ELRRDPRALRWR*VQAWCPTACWP Trigger: AGGCCAGCATGCCGTGGGACACCAGGCCTGGACGCAGCGCCAACGGAGGGCCCGAGGGTCCCGGCGCAGCTC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142012.2 |
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| CDS GCA 72 bp | CCACATGCAGCGACGTGCCACCGCCCTCCACGCGGCTaGAGCCACGGCGGTCGAGGAGGCGCACGCGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PHAATCHRPPRG*SHGGRGGARAL Trigger: AAGAGCGCGTGCGCCTCCTCGACCGCCGTGGCTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | AAGAGGCACTCGGGGCGTGCGAGCTCACAGGCCACATaGAGCGACGTGCCACCGCCCTCCACGCGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: KRHSGRASSQAT*SDVPPPSTRLQ Trigger: CTGCAGCCGCGTGGAGGGCGGTGGCACGTCGCTGCATGTGGCCTGTGAGCTCGCACGCCCCGAGTGCCTCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | GCCACGGCGGTCGAGGAGGCGCACGCGCTCTTCCACTaGGAAGTCCTGCACCGTTCGCAGGATGCGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ATAVEEAHALFH*EVLHRSQDAPQ Trigger: CTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAGAGCGCGTGCGCCTCCTCGACCGCCGTGGC 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | GGAAGTCCTGCACCGTTCGCAGGATGCGCCGCAGGATaGCCACGCGGTTGTAGCGCACCGCCAGCGCCACGT | + |
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Preference number: 6 (lower is better) Translates to: GSPAPFAGCAAG*PRGCSAPPAPR Trigger: ACGTGGCGCTGGCGGTGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | TCGAGGAGGCGCACGCGCTCTTCCACTGGGAAGTCCTaGACCGTTCGCAGGATGCGCCGCAGGATGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: SRRRTRSSTGKS*TVRRMRRRMPT Trigger: CGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAGAGCGCGTGCGCCTCCTCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | GCTCTTCCACTGGGAAGTCCTGCACCGTTCGCAGGATaGGCCGCAGGATGCCCACGCGGTTGTAGCGCACCG | + |
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Preference number: 6 (lower is better) Translates to: ALPLGSPAPFAG*AAGCPRGCSAP Trigger: CGGTGCGCTACAACCGCGTGGGCATCCTGCGGCGCATCCTGCGAACGGTGCAGGACTTCCCAGTGGAAGAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CAA 72 bp | AGGGAGGGTGGCGCCAGCCCTGCCAGCCACTGGAACTaGTCCTCACCCAACAACCGCTGCCAGCGTAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: REGGASPASHWN*SSPNNRCQRSW Trigger: CCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCCTCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS TCA 72 bp | GACCGTGGCAGAAGCTGCCTCAGCCTTAGTGGGGGCTaGGCTGGCGTCCTGGTTCAGCTGGCGCAACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: DRGRSCLSLSGG*AGVLVQLAQQQ Trigger: CTGCTGTTGCGCCAGCTGAACCAGGACGCCAGCTCAGCCCCCACTAAGGCTGAGGCAGCTTCTGCCACGGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CAA 90 bp | CGGACAAAGAGGGAGGGTGGCGCCAGCCCTGCCAGCCACTGGAACTaGTCCTCACCCAACAACCGCTGCCAGCGTAGCTGGTCTCCTAGC | + |
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Preference number: 6 (lower is better) Translates to: RTKREGGASPASHWN*SSPNNRCQRSWSPS Trigger: GCTAGGAGACCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | CATGGCACGGACAAAGAGGGAGGGTGGCGCCAGCCCTaGCAGCCACTGGAACTTGTCCTCACCCAACAACCG | + |
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Preference number: 6 (lower is better) Translates to: HGTDKEGGWRQP*QPLELVLTQQP Trigger: CGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGTCCGTGCCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | GGGAAGCGGCCAGGTGAGATAGTGGTGACCAACACCTaGATGGCACGGACAAAGAGGGAGGGTGGCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GKRPGEIVVTNT*MARTKREGGAS Trigger: GCTGGCGCCACCCTCCCTCTTTGTCCGTGCCATGCAGGTGTTGGTCACCACTATCTCACCTGGCCGCTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | ACAAAGAGGGAGGGTGGCGCCAGCCCTGCCAGCCACTaGAACTTGTCCTCACCCAACAACCGCTGCCAGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TKREGGASPASH*NLSSPNNRCQR Trigger: ACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGCAGGGCTGGCGCCACCCTCCCTCTTTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | CAGCGCGCCCCCGCTCATCACAGTGGAAGGCTTCGCTaGCACGTATGTCCTCGAGTAGCCAAACTGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QRAPAHHSGRLR*HVCPRVAKLAA Trigger: AGCTGCCAGTTTGGCTACTCGAGGACATACGTGCCAGCGAAGCCTTCCACTGTGATGAGCGGGGGCGCGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | GCTGCCTCAGCCTTAGTGGGGGCTGAGCTGGCGTCCTaGTTCAGCTGGCGCAACAGCAGCTCCAATGGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: AASALVGAELAS*FSWRNSSSNGV Trigger: TACACCATTGGAGCTGCTGTTGCGCCAGCTGAACCAGGACGCCAGCTCAGCCCCCACTAAGGCTGAGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS TCA 72 bp | CAGCTGATCTCGCACTGCCAGGTAGAAGGCGAAGGATaGCTTCCGGCACTGCTTCTGCACCCGCAAGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLISHCQVEGEG*LPALLLHPQAS Trigger: GCTCGCTTGCGGGTGCAGAAGCAGTGCCGGAAGTCATCCTTCGCCTTCTACCTGGCAGTGCGAGATCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | GCCTTAGTGGGGGCTGAGCTGGCGTCCTGGTTCAGCTaGCGCAACAGCAGCTCCAATGGTGTAAAGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ALVGAELASWFS*RNSSSNGVKPL Trigger: CAGTGGCTTTACACCATTGGAGCTGCTGTTGCGCCAGCTGAACCAGGACGCCAGCTCAGCCCCCACTAAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CAA 72 bp | ACCTCCTCAGACGAAGTGGTGTTGGCGGTGGCAGCATaGACCGTGGCAGAAGCTGCCTCAGCCTTAGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSDEVVLAVAA*TVAEAASALVG Trigger: CCCCACTAAGGCTGAGGCAGCTTCTGCCACGGTCAATGCTGCCACCGCCAACACCACTTCGTCTGAGGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS TCA 72 bp | TACAGTACTAGCAGGTCAAGCAGCAGCAGGCGGCGCTaGCACACCTCCTCAGACGAAGTGGTGTTGGCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: YSTSRSSSSRRR*HTSSDEVVLAV Trigger: CACCGCCAACACCACTTCGTCTGAGGAGGTGTGTCAGCGCCGCCTGCTGCTGCTTGACCTGCTAGTACTGTA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | GGCGTCCTGGTTCAGCTGGCGCAACAGCAGCTCCAATaGTGTAAAGCCACTGCCATCTCGAAGGCCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GVLVQLAQQQLQ*CKATAISKAWR Trigger: TCTCCAGGCCTTCGAGATGGCAGTGGCTTTACACCATTGGAGCTGCTGTTGCGCCAGCTGAACCAGGACGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS GCA 72 bp | GCCAGCCACTGGAACTTGTCCTCACCCAACAACCGCTaGCAGCGTAGCTGGTCTCCTAGCAGTTCACATCGA | + |
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Preference number: 6 (lower is better) Translates to: ASHWNLSSPNNR*QRSWSPSSSHR Trigger: TCGATGTGAACTGCTAGGAGACCAGCTACGCTGGCAGCGGTTGTTGGGTGAGGACAAGTTCCAGTGGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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| CDS CCA 72 bp | CTCCAATGGTGTAAAGCCACTGCCATCTCGAAGGCCTaGAGAAGCTCCGTGGCCAAGCAGCAGAAAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LQWCKATAISKA*RSSVAKQQKEA Trigger: TGCCTCTTTCTGCTGCTTGGCCACGGAGCTTCTCCAGGCCTTCGAGATGGCAGTGGCTTTACACCATTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043459.13 ENSMUST00000128353.8 ENSMUST00000135131.2 ENSMUST00000140788.8 ENSMUST00000142012.2 ENSMUST00000148765.2 |
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