RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029517

Ensembl transcript IDs: ENSMUST00000031489.10, ENSMUST00000115396.7

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGACAGGCTGGGCGGTGCGGTTTTGGCCAGGCTAATGGGCACTTCTaGGGAGTGGCTGTGGGAATCATCTGTCTTCCTCTTTCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: GQAGRCGFGQANGHF*GVAVGIICLPLSPE
Trigger: TTCAGGGGAAAGAGGAAGACAGATGATTCCCACAGCCACTCCTCAGAAGTGCCCATTAGCCTGGCCAAAACCGCACCGCCCAGCCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS GCA 90 bp ATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTTGACACTCTACTaGCTGCTTAATCAATGGGGTTCTGTTTTCACTATCCTGGACATT +
Preference number: 5 (lower is better)
Translates to: MKKKNRSTTLLLTLY*LLNQWGSVFTILDI
Trigger: AATGTCCAGGATAGTGAAAACAGAACCCCATTGATTAAGCAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115396.7
CDS GCA 90 bp ATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTTGACACTCTACTaGCTTAATCAATGGGGTTCTGTTTTCACTATCCTGGACATTAAT +
Preference number: 5 (lower is better)
Translates to: MKKKNRSTTLLLTLY*LNQWGSVFTILDIN
Trigger: ATTAATGTCCAGGATAGTGAAAACAGAACCCCATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031489.10
CDS CCA 90 bp AACCGTAGCACAACTCTCCTGTTGACACTCTACTGCCTTAATCAATaGGGTTCTGTTTTCACTATCCTGGACATTAATTTTGCATTGATT +
Preference number: 5 (lower is better)
Translates to: NRSTTLLLTLYCLNQ*GSVFTILDINFALI
Trigger: AATCAATGCAAAATTAATGTCCAGGATAGTGAAAACAGAACCCCATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031489.10
CDS CCA 90 bp GAACTTGTTGGTTCAACAATCAGAGCAATCATGATGGCTGTTCTGTaGTTTTTATCTGATGCATTTACATCTGCTCCTTTCTTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ELVGSTIRAIMMAVL*FLSDAFTSAPFFRR
Trigger: CCTTCTGAAGAAAGGAGCAGATGTAAATGCATCAGATAAAAACCACAGAACAGCCATCATGATTGCTCTGATTGTTGAACCAACAAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS GCA 90 bp ATTAAGAGAGAGACAATATTTGTATATCCATTAGCACAGGCCAAATaGAAAGGTGTTCTGCTTCTTTTGTCCCGCCCATTCACATTGTAT +
Preference number: 5 (lower is better)
Translates to: IKRETIFVYPLAQAK*KGVLLLLSRPFTLY
Trigger: ATACAATGTGAATGGGCGGGACAAAAGAAGCAGAACACCTTTGCATTTGGCCTGTGCTAATGGATATACAAATATTGTCTCTCTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CCA 90 bp TTTCAGCAACAGCAAGTAAAAGCGGAGTGTGACCGTCCTTATTTTTaGCTTCAAGATTGGCTTTATATTGAAGCAATTTATTGGCTAATG +
Preference number: 5 (lower is better)
Translates to: FQQQQVKAECDRPYF*LQDWLYIEAIYWLM
Trigger: CATTAGCCAATAAATTGCTTCAATATAAAGCCAATCTTGAAGCCAAAAATAAGGACGGTCACACTCCGCTTTTACTTGCTGTTGCTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS TCA 72 bp GGGCGGTGCGGTTTTGGCCAGGCTAATGGGCACTTCTaGGGAGTGGCTGTGGGAATCATCTGTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: GRCGFGQANGHF*GVAVGIICLPL
Trigger: AAGAGGAAGACAGATGATTCCCACAGCCACTCCTCAGAAGTGCCCATTAGCCTGGCCAAAACCGCACCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CCA 72 bp TTGGCCAGGCTAATGGGCACTTCTGAGGAGTGGCTGTaGGAATCATCTGTCTTCCTCTTTCCCCTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: LARLMGTSEEWL*ESSVFLFPLKG
Trigger: CCCCTTCAGGGGAAAGAGGAAGACAGATGATTCCCACAGCCACTCCTCAGAAGTGCCCATTAGCCTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CAA 90 bp TGGATCTGCACCATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTaGACACTCTACTGCCTGCTTAATCAATGGGGTTCTGTTTTCACT +
Preference number: 6 (lower is better)
Translates to: WICTMKKKNRSTTLL*TLYCLLNQWGSVFT
Trigger: AGTGAAAACAGAACCCCATTGATTAAGCAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCATGGTGCAGATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115396.7
CDS CAA 72 bp ACCATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTaGACACTCTACTGCCTGCTTAATCAATGGGGTTCT +
Preference number: 6 (lower is better)
Translates to: TMKKKNRSTTLL*TLYCLLNQWGS
Trigger: AGAACCCCATTGATTAAGCAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115396.7
CDS CAA 90 bp TGGATCTGCACCATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTaGACACTCTACTGCCTTAATCAATGGGGTTCTGTTTTCACTATC +
Preference number: 6 (lower is better)
Translates to: WICTMKKKNRSTTLL*TLYCLNQWGSVFTI
Trigger: GATAGTGAAAACAGAACCCCATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCATGGTGCAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031489.10
CDS GCA 72 bp TGCTTCTTTTGTCCCGCCCATTCACATTGTATTTCTTaGGTTCAAGGTAATCCTTCAGCTTCTGCTCATTGC +
Preference number: 6 (lower is better)
Translates to: CFFCPAHSHCIS*VQGNPSASAHC
Trigger: GCAATGAGCAGAAGCTGAAGGATTACCTTGAACGCAAGAAATACAATGTGAATGGGCGGGACAAAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS GCA 72 bp AAGAACCGTAGCACAACTCTCCTGTTGACACTCTACTaGCTTAATCAATGGGGTTCTGTTTTCACTATCCTG +
Preference number: 6 (lower is better)
Translates to: KNRSTTLLLTLY*LNQWGSVFTIL
Trigger: CAGGATAGTGAAAACAGAACCCCATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000031489.10
CDS GCA 72 bp AAGAACCGTAGCACAACTCTCCTGTTGACACTCTACTaGCTGCTTAATCAATGGGGTTCTGTTTTCACTATC +
Preference number: 6 (lower is better)
Translates to: KNRSTTLLLTLY*LLNQWGSVFTI
Trigger: GATAGTGAAAACAGAACCCCATTGATTAAGCAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115396.7
CDS CAA 72 bp TTAGCACAGGCCAAATGCAAAGGTGTTCTGCTTCTTTaGTCCCGCCCATTCACATTGTATTTCTTGCGTTCA +
Preference number: 6 (lower is better)
Translates to: LAQAKCKGVLLL*SRPFTLYFLRS
Trigger: TGAACGCAAGAAATACAATGTGAATGGGCGGGACAAAAGAAGCAGAACACCTTTGCATTTGGCCTGTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CAA 72 bp ACCATGAAGAAGAAGAACCGTAGCACAACTCTCCTGTaGACACTCTACTGCCTTAATCAATGGGGTTCTGTT +
Preference number: 6 (lower is better)
Translates to: TMKKKNRSTTLL*TLYCLNQWGSV
Trigger: AACAGAACCCCATTGATTAAGGCAGTAGAGTGTCAACAGGAGAGTTGTGCTACGGTTCTTCTTCTTCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000031489.10
CDS GCA 72 bp GAGACAATATTTGTATATCCATTAGCACAGGCCAAATaGAAAGGTGTTCTGCTTCTTTTGTCCCGCCCATTC +
Preference number: 6 (lower is better)
Translates to: ETIFVYPLAQAK*KGVLLLLSRPF
Trigger: GAATGGGCGGGACAAAAGAAGCAGAACACCTTTGCATTTGGCCTGTGCTAATGGATATACAAATATTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS GCA 72 bp AGCCGTATTACTATAAACATCTACCAGATTTGGATCTaGACCATGAAGAAGAAGAACCGTAGCACAACTCTC +
Preference number: 6 (lower is better)
Translates to: SRITINIYQIWI*TMKKKNRSTTL
Trigger: GAGAGTTGTGCTACGGTTCTTCTTCTTCATGGTGCAGATCCAAATCTGGTAGATGTTTATAGTAATACGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CCA 72 bp GGTTCAACAATCAGAGCAATCATGATGGCTGTTCTGTaGTTTTTATCTGATGCATTTACATCTGCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: GSTIRAIMMAVL*FLSDAFTSAPF
Trigger: GAAAGGAGCAGATGTAAATGCATCAGATAAAAACCACAGAACAGCCATCATGATTGCTCTGATTGTTGAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS CCA 72 bp CAGCAAGTAAAAGCGGAGTGTGACCGTCCTTATTTTTaGCTTCAAGATTGGCTTTATATTGAAGCAATTTAT +
Preference number: 6 (lower is better)
Translates to: QQVKAECDRPYF*LQDWLYIEAIY
Trigger: ATAAATTGCTTCAATATAAAGCCAATCTTGAAGCCAAAAATAAGGACGGTCACACTCCGCTTTTACTTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7
CDS TCA 72 bp TTACAGAACTTGTTGGTTCAACAATCAGAGCAATCATaGTGGCTGTTCTGTGGTTTTTATCTGATGCATTTA +
Preference number: 6 (lower is better)
Translates to: LQNLLVQQSEQS*WLFCGFYLMHL
Trigger: TAAATGCATCAGATAAAAACCACAGAACAGCCATCATGATTGCTCTGATTGTTGAACCAACAAGTTCTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000031489.10
ENSMUST00000115396.7