Pregenerated sensors for ANKRD65 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078487Ensembl transcript IDs: ENSMUST00000105593.2, ENSMUST00000165000.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGTGCACCTGCCAGAGCCCCACGCTGCAACAGCAGGCGAACCAGTaGTGCGTGCCCCCGCATCACAGCCAGGTGGAGTGGAGTCCTACC | + |
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Preference number: 5 (lower is better) Translates to: RCTCQSPTLQQQANQ*CVPPHHSQVEWSPT Trigger: GGTAGGACTCCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 90 bp | TGCACCTGCCAGAGCCCCACGCTGCAACAGCAGGCGAACCAGTGGTaGGTGCCCCCGCATCACAGCCAGGTGGAGTGGAGTCCTACCTGT | + |
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Preference number: 5 (lower is better) Translates to: CTCQSPTLQQQANQW*VPPHHSQVEWSPTC Trigger: ACAGGTAGGACTCCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 90 bp | GGCAGCCTCATGCAATGGTGTGCGCCCTGTGTGGTCAGGTGCACCTaGCAGAGCCCCACGCTGCAACAGCAGGCGAACCAGTGGTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: GSLMQWCAPCVVRCT*QSPTLQQQANQWCV Trigger: CACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCTGACCACACAGGGCGCACACCATTGCATGAGGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 90 bp | ATGCCAGGCAGCCTCATGCAATGGTGTGCGCCCTGTGTGGTCAGGTaGACCTGCCAGAGCCCCACGCTGCAACAGCAGGCGAACCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: MPGSLMQWCAPCVVR*TCQSPTLQQQANQW Trigger: CCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCTGACCACACAGGGCGCACACCATTGCATGAGGCTGCCTGGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 90 bp | GCTGCCGAGGCCCCACGTCGCAGCAATAGTTCTGCCACGTTTGAGTaGCCATGCCAGGCAGCCTCATGCAATGGTGTGCGCCCTGTGTGG | + |
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Preference number: 5 (lower is better) Translates to: AAEAPRRSNSSATFE*PCQAASCNGVRPVW Trigger: CCACACAGGGCGCACACCATTGCATGAGGCTGCCTGGCATGGGCACTCAAACGTGGCAGAACTATTGCTGCGACGTGGGGCCTCGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 90 bp | CAGGCGAACCAGTGGTGCGTGCCCCCGCATCACAGCCAGGTGGAGTaGAGTCCTACCTGTGTGATCCCTCTCCTCCACACTGGAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: QANQWCVPPHHSQVE*SPTCVIPLLHTGAL Trigger: CAAGGCTCCAGTGTGGAGGAGAGGGATCACACAGGTAGGACTCCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTGGTTCGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS TCA 90 bp | TTTGGGTCTGCCCCATGGTCCAGCAGGACCTCAATGTCTTGGTGGTaGCCTAAGCCAGCTGCCAGGCCAAGTGCGGTGGCCCCCGTACTG | + |
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Preference number: 5 (lower is better) Translates to: FGSAPWSSRTSMSWW*PKPAARPSAVAPVL Trigger: CAGTACGGGGGCCACCGCACTTGGCCTGGCAGCTGGCTTAGGTCACCACCAAGACATTGAGGTCCTGCTGGACCATGGGGCAGACCCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CCA 90 bp | AGAGCATTTGGTGGTGACCTAAGCCAGCTGCCAGGCCAAGTGCGGTaGCCCCCGTACTGTCCTGGGTGTCCACCTTTGCCCCCAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RAFGGDLSQLPGQVR*PPYCPGCPPLPPVS Trigger: TGACACTGGGGGCAAAGGTGGACACCCAGGACAGTACGGGGGCCACCGCACTTGGCCTGGCAGCTGGCTTAGGTCACCACCAAATGCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105593.2 |
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| CDS CCA 90 bp | CAATGTCTTGGTGGTGACCTAAGCCAGCTGCCAGGCCAAGTGCGGTaGCCCCCGTACTGTCCTGGGTGTCCACCTTTGCCCCCAGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: QCLGGDLSQLPGQVR*PPYCPGCPPLPPVS Trigger: TGACACTGGGGGCAAAGGTGGACACCCAGGACAGTACGGGGGCCACCGCACTTGGCCTGGCAGCTGGCTTAGGTCACCACCAAGACATTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 90 bp | TCCAGCAGACAGCAGCTCCAGCACCGCCAGTTGCCCACAAGCCGCTaGCCAGTGTGCTGCAGTCCAGCCTCTTACATCTTTCACATCAGA | + |
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Preference number: 5 (lower is better) Translates to: SSRQQLQHRQLPTSR*PVCCSPASYIFHIR Trigger: TCTGATGTGAAAGATGTAAGAGGCTGGACTGCAGCACACTGGGCAGCGGCTTGTGGGCAACTGGCGGTGCTGGAGCTGCTGTCTGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 90 bp | TTGATGTGTGCACCCCTGTCCAGGAGATGGCTGACAACTTCTACATaGCCGCCTCGAGCAGCATGGTGCAGAGGTGTGAGGCCCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LMCAPLSRRWLTTST*PPRAAWCRGVRPRE Trigger: CTCTCTGGGCCTCACACCTCTGCACCATGCTGCTCGAGGCGGCCATGTAGAAGTTGTCAGCCATCTCCTGGACAGGGGTGCACACATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 90 bp | TCAAGGTGGAGTTGGCTCCTCGGCTCAGCAAAAGCTCCACAGTGGTaGTGTGGCCATTCTCCACAGCAAGGTGCAGAGGGGTCTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SRWSWLLGSAKAPQW*CGHSPQQGAEGSCG Trigger: TCCACAAGACCCCTCTGCACCTTGCTGTGGAGAATGGCCACAGCACCACTGTGGAGCTTTTGCTGAGCCGAGGAGCCAACTCCACCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CCA 90 bp | GGCAGCCCTGTGGAGTGCAGAGCGGTTGTTTCTGTCCCTGATATTTaGGTCTGCCCCATGGTCCAGCAGGACCTCAATGTCTTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSPVECRAVVSVPDI*VCPMVQQDLNVLVV Trigger: CACCACCAAGACATTGAGGTCCTGCTGGACCATGGGGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS TCA 90 bp | CACCAGTGGCAGCCCTGTGGAGTGCAGAGCGGTTGTTTCTGTCCCTaGTATTTGGGTCTGCCCCATGGTCCAGCAGGACCTCAATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HQWQPCGVQSGCFCP*YLGLPHGPAGPQCL Trigger: AAGACATTGAGGTCCTGCTGGACCATGGGGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTGCCACTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS TCA 90 bp | CCGCCTCGAGCAGCATGGTGCAGAGGTGTGAGGCCCAGAGAGTCCTaGGCGTCTATTTCAATGCCCTTAGCCACTAGCAGCTGTGTAACT | + |
|
Preference number: 5 (lower is better) Translates to: PPRAAWCRGVRPRES*ASISMPLATSSCVT Trigger: AGTTACACAGCTGCTAGTGGCTAAGGGCATTGAAATAGACGCTCAGGACTCTCTGGGCCTCACACCTCTGCACCATGCTGCTCGAGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 90 bp | AGCAAAAGCTCCACAGTGGTGCTGTGGCCATTCTCCACAGCAAGGTaGAGAGGGGTCTTGTGGAGCCAGCCAGCAGCATTGATGTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SKSSTVVLWPFSTAR*RGVLWSQPAALMCA Trigger: TGCACACATCAATGCTGCTGGCTGGCTCCACAAGACCCCTCTGCACCTTGCTGTGGAGAATGGCCACAGCACCACTGTGGAGCTTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 90 bp | GTACTGTCCTGGGTGTCCACCTTTGCCCCCAGTGTCAGAAGAAGCTaGAACGATGACGTACTTCCAGCTATCGCTGATACCAGCAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: VLSWVSTFAPSVRRS*NDDVLPAIADTSKA Trigger: CGCCTTGCTGGTATCAGCGATAGCTGGAAGTACGTCATCGTTGCAGCTTCTTCTGACACTGGGGGCAAAGGTGGACACCCAGGACAGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 90 bp | ACTAGCAGCTGTGTAACTCGTAGATGCCCACCAGTGGCAGCCCTGTaGAGTGCAGAGCGGTTGTTTCTGTCCCTGATATTTGGGTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: TSSCVTRRCPPVAAL*SAERLFLSLIFGSA Trigger: GGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTGCCACTGGTGGGCATCTACGAGTTACACAGCTGCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CCA 90 bp | CCTCCCAGACCAGCTTCATCCACCGTAGTTCCTGCTCCAGACTGCTaGAATCCATATCTGAACAGCGGGGCTGACCAGATTCTAGATGTG | + |
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Preference number: 5 (lower is better) Translates to: PPRPASSTVVPAPDC*NPYLNSGADQILDV Trigger: CACATCTAGAATCTGGTCAGCCCCGCTGTTCAGATATGGATTCCAGCAGTCTGGAGCAGGAACTACGGTGGATGAAGCTGGTCTGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS TCA 72 bp | GCGTGCGGCCCAGAGCGGCTGCCCCGTGCAGGGGCGTaGGGCCGGTTTGAGAGCATGCCGCTGCCGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ACGPERLPRAGA*GRFESMPLPRP Trigger: GGGCCTCGGCAGCGGCATGCTCTCAAACCGGCCTCACGCCCCTGCACGGGGCAGCCGCTCTGGGCCGCACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | CCTGTGTGGTCAGGTGCACCTGCCAGAGCCCCACGCTaGAACAGCAGGCGAACCAGTGGTGCGTGCCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PVWSGAPARAPR*NSRRTSGACPR Trigger: GCGGGGGCACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCTGACCACACAGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | TGCCAGAGCCCCACGCTGCAACAGCAGGCGAACCAGTaGTGCGTGCCCCCGCATCACAGCCAGGTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: CQSPTLQQQANQ*CVPPHHSQVEW Trigger: CCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | GCCCCACGCTGCAACAGCAGGCGAACCAGTGGTGCGTaGCCCCGCATCACAGCCAGGTGGAGTGGAGTCCTA | + |
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Preference number: 6 (lower is better) Translates to: APRCNSRRTSGA*PRITARWSGVL Trigger: TAGGACTCCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTGGTTCGCCTGCTGTTGCAGCGTGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | GGTGGTGACCTAAGCCAGCTGCCAGGCCAAGTGCGGTaGCCCCCGTACTGTCCTGGGTGTCCACCTTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GGDLSQLPGQVR*PPYCPGCPPLP Trigger: GGGCAAAGGTGGACACCCAGGACAGTACGGGGGCCACCGCACTTGGCCTGGCAGCTGGCTTAGGTCACCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | AGCCTCATGCAATGGTGTGCGCCCTGTGTGGTCAGGTaGACCTGCCAGAGCCCCACGCTGCAACAGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SLMQWCAPCVVR*TCQSPTLQQQA Trigger: CGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCTGACCACACAGGGCGCACACCATTGCATGAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | GCTGCCAGGCCAAGTGCGGTGGCCCCCGTACTGTCCTaGGTGTCCACCTTTGCCCCCAGTGTCAGAAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AARPSAVAPVLS*VSTFAPSVRRS Trigger: GCTTCTTCTGACACTGGGGGCAAAGGTGGACACCCAGGACAGTACGGGGGCCACCGCACTTGGCCTGGCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS TCA 72 bp | GCCCCATGGTCCAGCAGGACCTCAATGTCTTGGTGGTaGCCTAAGCCAGCTGCCAGGCCAAGTGCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: APWSSRTSMSWW*PKPAARPSAVA Trigger: GGCCACCGCACTTGGCCTGGCAGCTGGCTTAGGTCACCACCAAGACATTGAGGTCCTGCTGGACCATGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 72 bp | ATGCAATGGTGTGCGCCCTGTGTGGTCAGGTGCACCTaGCAGAGCCCCACGCTGCAACAGCAGGCGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: MQWCAPCVVRCT*QSPTLQQQANQ Trigger: CTGGTTCGCCTGCTGTTGCAGCGTGGGGCTCTGGCAGGTGCACCTGACCACACAGGGCGCACACCATTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | TTGAGTGCCCATGCCAGGCAGCCTCATGCAATGGTGTaGGCCCTGTGTGGTCAGGTGCACCTGCCAGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSAHARQPHAMV*ALCGQVHLPEP Trigger: GGGCTCTGGCAGGTGCACCTGACCACACAGGGCGCACACCATTGCATGAGGCTGCCTGGCATGGGCACTCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CAA 90 bp | ATGCCGCTGCCGAGGCCCCACGTCGCAGCAATAGTTCTGCCACGTTaGAGTGCCCATGCCAGGCAGCCTCATGCAATGGTGTGCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: MPLPRPHVAAIVLPR*SAHARQPHAMVCAL Trigger: CAGGGCGCACACCATTGCATGAGGCTGCCTGGCATGGGCACTCAAACGTGGCAGAACTATTGCTGCGACGTGGGGCCTCGGCAGCGGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | CCAGCCCGGAGATGTAAGAGGTCGCTCTGTCTTGTCTaGTGGGGCCTCCTCCCAGACCAGCTTCATCCACCG | + |
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Preference number: 6 (lower is better) Translates to: PARRCKRSLCLV*WGLLPDQLHPP Trigger: CGGTGGATGAAGCTGGTCTGGGAGGAGGCCCCAGCAGACAAGACAGAGCGACCTCTTACATCTCCGGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | CAGTGGTGCGTGCCCCCGCATCACAGCCAGGTGGAGTaGAGTCCTACCTGTGTGATCCCTCTCCTCCACACT | + |
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Preference number: 6 (lower is better) Translates to: QWCVPPHHSQVE*SPTCVIPLLHT Trigger: AGTGTGGAGGAGAGGGATCACACAGGTAGGACTCCACTCCACCTGGCTGTGATGCGGGGGCACGCACCACTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | GGGCCGCTTCACCCCACTGTGTCCTCAAGGTGGAGTTaGCTCCTCGGCTCAGCAAAAGCTCCACAGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GPLHPTVSSRWS*LLGSAKAPQWC Trigger: GCACCACTGTGGAGCTTTTGCTGAGCCGAGGAGCCAACTCCACCTTGAGGACACAGTGGGGTGAAGCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 72 bp | GTGCGGTGGCCCCCGTACTGTCCTGGGTGTCCACCTTaGCCCCCAGTGTCAGAAGAAGCTGCAACGATGACG | + |
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Preference number: 6 (lower is better) Translates to: VRWPPYCPGCPP*PPVSEEAATMT Trigger: CGTCATCGTTGCAGCTTCTTCTGACACTGGGGGCAAAGGTGGACACCCAGGACAGTACGGGGGCCACCGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CCA 72 bp | GCACCCCTGTCCAGGAGATGGCTGACAACTTCTACATaGCCGCCTCGAGCAGCATGGTGCAGAGGTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: APLSRRWLTTST*PPRAAWCRGVR Trigger: CCTCACACCTCTGCACCATGCTGCTCGAGGCGGCCATGTAGAAGTTGTCAGCCATCTCCTGGACAGGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 72 bp | CCGAGGCCCCACGTCGCAGCAATAGTTCTGCCACGTTaGAGTGCCCATGCCAGGCAGCCTCATGCAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: PRPHVAAIVLPR*SAHARQPHAMV Trigger: CACCATTGCATGAGGCTGCCTGGCATGGGCACTCAAACGTGGCAGAACTATTGCTGCGACGTGGGGCCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CAA 72 bp | TGGGCCGCTTCACCCCACTGTGTCCTCAAGGTGGAGTaGGCTCCTCGGCTCAGCAAAAGCTCCACAGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: WAASPHCVLKVE*APRLSKSSTVV Trigger: CACCACTGTGGAGCTTTTGCTGAGCCGAGGAGCCAACTCCACCTTGAGGACACAGTGGGGTGAAGCGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 90 bp | GAGTGGAGTCCTACCTGTGTGATCCCTCTCCTCCACACTGGAGCCTaGTCTCAGCAGCTGCATCACCAGGCTAGGAGCACCCCACCACAC | + |
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Preference number: 6 (lower is better) Translates to: EWSPTCVIPLLHTGA*SQQLHHQARSTPPH Trigger: GTGTGGTGGGGTGCTCCTAGCCTGGTGATGCAGCTGCTGAGACAAGGCTCCAGTGTGGAGGAGAGGGATCACACAGGTAGGACTCCACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS TCA 72 bp | CGCATCACAGCCAGGTGGAGTGGAGTCCTACCTGTGTaGTCCCTCTCCTCCACACTGGAGCCTTGTCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RITARWSGVLPV*SLSSTLEPCLS Trigger: GCTGAGACAAGGCTCCAGTGTGGAGGAGAGGGATCACACAGGTAGGACTCCACTCCACCTGGCTGTGATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | CGTCGCAGCAATAGTTCTGCCACGTTTGAGTGCCCATaGCAGGCAGCCTCATGCAATGGTGTGCGCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RRSNSSATFECP*QAASCNGVRPV Trigger: CACAGGGCGCACACCATTGCATGAGGCTGCCTGGCATGGGCACTCAAACGTGGCAGAACTATTGCTGCGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS GCA 72 bp | ATGCCCTTAGCCACTAGCAGCTGTGTAACTCGTAGATaGCCACCAGTGGCAGCCCTGTGGAGTGCAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: MPLATSSCVTRR*PPVAALWSAER Trigger: CCGCTCTGCACTCCACAGGGCTGCCACTGGTGGGCATCTACGAGTTACACAGCTGCTAGTGGCTAAGGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 72 bp | TCCACAGTGGTGCTGTGGCCATTCTCCACAGCAAGGTaGAGAGGGGTCTTGTGGAGCCAGCCAGCAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: STVVLWPFSTAR*RGVLWSQPAAL Trigger: CAATGCTGCTGGCTGGCTCCACAAGACCCCTCTGCACCTTGCTGTGGAGAATGGCCACAGCACCACTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 72 bp | AGTTGGCTCCTCGGCTCAGCAAAAGCTCCACAGTGGTaGTGTGGCCATTCTCCACAGCAAGGTGCAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SWLLGSAKAPQW*CGHSPQQGAEG Trigger: CCCCTCTGCACCTTGCTGTGGAGAATGGCCACAGCACCACTGTGGAGCTTTTGCTGAGCCGAGGAGCCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 72 bp | CCTACCTGTGTGATCCCTCTCCTCCACACTGGAGCCTaGTCTCAGCAGCTGCATCACCAGGCTAGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: PTCVIPLLHTGA*SQQLHHQARST Trigger: GGTGCTCCTAGCCTGGTGATGCAGCTGCTGAGACAAGGCTCCAGTGTGGAGGAGAGGGATCACACAGGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS CAA 72 bp | TGCCCACCAGTGGCAGCCCTGTGGAGTGCAGAGCGGTaGTTTCTGTCCCTGATATTTGGGTCTGCCCCATGG | + |
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Preference number: 6 (lower is better) Translates to: CPPVAALWSAER*FLSLIFGSAPW Trigger: CCATGGGGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTGCCACTGGTGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 90 bp | ACTCGTAGATGCCCACCAGTGGCAGCCCTGTGGAGTGCAGAGCGGTaGTTTCTGTCCCTGATATTTGGGTCTGCCCCATGGTCCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRRCPPVAALWSAER*FLSLIFGSAPWSSR Trigger: CCTGCTGGACCATGGGGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTGCCACTGGTGGGCATCTACGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS CAA 90 bp | TGGAACAGAGTACTCCAGCCCGGAGATGTAAGAGGTCGCTCTGTCTaGTCTGCTGGGGCCTCCTCCCAGACCAGCTTCATCCACCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: WNRVLQPGDVRGRSV*SAGASSQTSFIHRS Trigger: ACTACGGTGGATGAAGCTGGTCTGGGAGGAGGCCCCAGCAGACAAGACAGAGCGACCTCTTACATCTCCGGGCTGGAGTACTCTGTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105593.2 ENSMUST00000165000.8 |
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| CDS TCA 72 bp | CAGCCCTGTGGAGTGCAGAGCGGTTGTTTCTGTCCCTaGTATTTGGGTCTGCCCCATGGTCCAGCAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: QPCGVQSGCFCP*YLGLPHGPAGP Trigger: AGGTCCTGCTGGACCATGGGGCAGACCCAAATATCAGGGACAGAAACAACCGCTCTGCACTCCACAGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS TCA 72 bp | TCCAGACTGCTGGAATCCATATCTGAACAGCGGGGCTaGCCAGATTCTAGATGTGGGCAGCAGGGCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRLLESISEQRG*PDSRCGQQGLA Trigger: GGCAAGGCCCTGCTGCCCACATCTAGAATCTGGTCAGCCCCGCTGTTCAGATATGGATTCCAGCAGTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS TCA 72 bp | GCAGCATGGTGCAGAGGTGTGAGGCCCAGAGAGTCCTaGGCGTCTATTTCAATGCCCTTAGCCACTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AAWCRGVRPRES*ASISMPLATSS Trigger: GCTGCTAGTGGCTAAGGGCATTGAAATAGACGCTCAGGACTCTCTGGGCCTCACACCTCTGCACCATGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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| CDS GCA 72 bp | AGGGGTCTTGTGGAGCCAGCCAGCAGCATTGATGTGTaGACCCCTGTCCAGGAGATGGCTGACAACTTCTAC | + |
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Preference number: 6 (lower is better) Translates to: RGLVEPASSIDV*TPVQEMADNFY Trigger: GTAGAAGTTGTCAGCCATCTCCTGGACAGGGGTGCACACATCAATGCTGCTGGCTGGCTCCACAAGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165000.8 |
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