Pregenerated sensors for ANKRD61 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029607Ensembl transcript IDs: ENSMUST00000079624.12, ENSMUST00000110717.9, ENSMUST00000110718.2
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCGCAGCCCACCCCCGCTaGCAGCAGTCGGCCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: SGYLSSQKQEFALLRFSGAAHPR*QQSADF Trigger: AAAGTCGGCCGACTGCTGGCAGCGGGGGTGGGCTGC...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | ATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGCAGCCCACCCCCGCTaGCAGCAGTCGGCCGACTTT | + |
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Preference number: 4 (lower is better) Translates to: ISGYLSSQKQEFALLRFSAAHPR*QQSADF Trigger: AAAGTCGGCCGACTGCTGGCAGCGGGGGTGGGCTGC...GGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGTCTGCCTCCAAAGCATaGCTCGTGCAGAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: GYLSSQKQEFALLRFSGRSASKA*LVQSCL Trigger: CAGACAGCTCTGCACGAGGCATGCTTTGGAGGCAGA...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGGCTGTCTGGCCTTCATaGTCCTGGGCATTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGAVWPS*SWALTW Trigger: CCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGC...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTCGTGCAGAGCTGTCTaGCCTTCATGGTCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGSCRAV*PSWSWA Trigger: TGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGA...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGAGGTGGAGGGCTGAATaGTTGTTGCTGTTGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: GYLSSQKQEFALLRFSGRRWRAE*LLLLST Trigger: GGTAGACAACAGCAACAAGCATTCAGCCCTCCACCT...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCACAGCGACCCTCCTaGCTCCGCCTCCCAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLSQRPS*LRLPVV Trigger: CACAACTGGGAGGCGGAGGCAGGAGGGTCGCTGTGA...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGGCTGTGGGTGTGTTCTaGGAGGAGGAGGGTACCCTT | + |
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Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRAVGVF*EEEGTL Trigger: AAGGGTACCCTCCTCCTCTCAGAACACACCCACAGC...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079624.12 |
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| CDS-3UTR GCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGGGGCTGAATGCTTGTTaGTGTTGTCTACCCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGGLNAC*CCLPGH Trigger: ATGCCCGGGTAGACAACAGCAACAAGCATTCAGCCC...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGTGGAGGGCTGAATaGTTGTTGCTGTTGTCTACC | + |
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Preference number: 4 (lower is better) Translates to: SGYLSSQKQEFALLRFSGRWRAE*LLLLST Trigger: GGTAGACAACAGCAACAAGCATTCAGCCCTCCACCT...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCGCTGTCTGGCCTTCATaGTCCTGGGCATTGACCTGG | + |
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Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFAVWPS*SWALTW Trigger: CCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGC...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTCGTGCAGAGCTGTCTaGCCTTCATGGTCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRSCRAV*PSWSWA Trigger: TGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGA...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | GTCCAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGTCGTGCAGAGCTGTCTaGCCTTCATGGTCCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VQVISGYLSSQKQEFALLSCRAV*PSWSWA Trigger: TGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGA...CAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTGTAACGGGTGGAGTTaGCCAGGATGGTCAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFCNGWS*PGWSGA Trigger: AGCCCCTGACCATCCTGGCCAACTCCACCCGTTACA...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS-3UTR TCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTTAAGCAGCATCAGGTaGAGGGTAGTGAAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGLSSIR*RVVKPW Trigger: CCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAA...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCTCTTTTGGATCTGAGTaGTGGGTTTGGACCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SGYLSSQKQEFALLRFSGSFGSE*WVWTKW Trigger: CCACTTGGTCCAAACCCAGCACTCAGATCCAAAAGA...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | TTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTAGCCCAAAGCATGCCTCGTaGAGAGCTGTCTGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LYVAVGSEVQVISGYLSSPKHAS*RAVWPS Trigger: TGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGG...GCTAGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCCCAAAGCATGCCTCGTaGAGAGCTGTCTGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFPKHAS*RAVWPS Trigger: TGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGG...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGACCCGGGCATTAACTTaGGCTCCGTGGTCACACAAA | + |
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Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRTRALT*APWSHK Trigger: TTTGTGTGACCACGGAGCTCAAGTTAATGCCCGGGT...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | ATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCACCCGGGCATTAACTTaGGCTCCGTGGTCACACAAA | + |
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Preference number: 4 (lower is better) Translates to: ISGYLSSQKQEFALLRFSTRALT*APWSHK Trigger: TTTGTGTGACCACGGAGCTCAAGTTAATGCCCGGGT...GGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGCATGGTCCTGGGCATTaGCCTGGGCTCCGTTATTTA | + |
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Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRHGPGH*PGLRYL Trigger: TAAATAACGGAGCCCAGGTCAATGCCCAGGACCATG...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | GTCCAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGCATGGTCCTGGGCATTaGCCTGGGCTCCGTTATTTA | + |
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Preference number: 4 (lower is better) Translates to: VQVISGYLSSQKQEFALLHGPGH*PGLRYL Trigger: TAAATAACGGAGCCCAGGTCAATGCCCAGGACCATG...CAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCCCCCATAAACATTCCTaGTGCTTCTCTTACAGATGG | + |
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Preference number: 4 (lower is better) Translates to: SGYLSSQKQEFALLRFSGPHKHS*CFSYRW Trigger: CCATCTGTAAGAGAAGCATCAGGAATGTTTATGGGG...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGGGGCTGAATGCTTGTTaGTGTTGTCTACCCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRGLNAC*CCLPGH Trigger: ATGCCCGGGTAGACAACAGCAACAAGCATTCAGCCC...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCGGGCTGAATGCTTGTTaGTGTTGTCTACCCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFGLNAC*CCLPGH Trigger: ATGCCCGGGTAGACAACAGCAACAAGCATTCAGCCC...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGCCAAAGCATGCCTCGTaGAGAGCTGTCTGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLPKHAS*RAVWPS Trigger: TGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGG...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTGCCTCCAAAGCATaGCTCGTGCAGAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLSASKA*LVQSCL Trigger: CAGACAGCTCTGCACGAGGCATGCTTTGGAGGCAGA...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | TTAAGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTTCTGCCTCCAAAGCATaGCTCGTGCAGAGCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LRASSLYVAVGSEVQVISSASKA*LVQSCL Trigger: CAGACAGCTCTGCACGAGGCATGCTTTGGAGGCAGA...AGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGGAAGGTACATGTAAATaGGAGACTCCCCATTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GYLSSQKQEFALLRFSGREGTCK*ETPHFL Trigger: CAAGAAATGGGGAGTCTCCCATTTACATGTACCTTC...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTGGCCCCAAAGGCAATaGGTGTCTCTATCATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGWPQRQ*VSLSCF Trigger: AAAACATGATAGAGACACTCATTGCCTTTGGGGCCA...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGGTTTCCCTTAGGAGCTaGTATTCTGGCAGCATGATT | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGVSLRS*YSGSMI Trigger: AATCATGCTGCCAGAATACCAGCTCCTAAGGGAAAC...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | TTAAGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTTTAAGCAGCATCAGGTaGAGGGTAGTGAAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LRASSLYVAVGSEVQVISLSSIR*RVVKPW Trigger: CCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAA...AGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTTTAAGCAGCATCAGGTaGAGGGTAGTGAAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSLSSIR*RVVKPW Trigger: CCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAA...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGAAGACAGCGTTGTTCTaGATGTCCATCAGGATCTTT | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGKTALF*MSIRIF Trigger: AAAGATCCTGATGGACATTCAGAACAACGCTGTCTT...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCTTTTGGATCTGAGTaGTGGGTTTGGACCAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFSFGSE*WVWTKW Trigger: CCACTTGGTCCAAACCCAGCACTCAGATCCAAAAGA...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GTCCAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGCGTGGTCACACAAAATaGACAGACACAAGACAGCGT | + |
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Preference number: 4 (lower is better) Translates to: VQVISGYLSSQKQEFALLRGHTK*TDTRQR Trigger: ACGCTGTCTTGTGTCTGTGCATTTTGTGTGACCACG...CAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGGTCTTAAAGGATAAGTaGGGTAAAGTAGTCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RASSLYVAVGSEVQVISGVLKDK*GKVVWP Trigger: TGGCCAGACTACTTTACCGCACTTATCCTTTAAGAC...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR GCA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGGAATCCCCTGTTTATTaGTCAGTCTTAAAGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: GYLSSQKQEFALLRFSGRESPVY*SVLKDK Trigger: CTTATCCTTTAAGACTGAGCAATAAACAGGGGATTC...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTGGCTGGTTGACAGGGTaGTTTCTGAGAAGTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSGWLTG*FLRSVL Trigger: CAAGACACTTCTCAGAAACCACCCTGTCAACCAGCC...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS-3UTR TCA 90 bp | TTAAGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTACCTGGGCACCATTTTaGGCCAAAAAGGAGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: LRASSLYVAVGSEVQVISTWAPF*AKKERT Trigger: AGTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGT...AGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS-3UTR TCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGACCTGGGCACCATTTTaGGCCAAAAAGGAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLTWAPF*AKKERT Trigger: AGTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGT...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCTGGCCCCAAAGGCAATaGGTGTCTCTATCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISGYLSSQKQEFALLRFSWPQRQ*VSLSCF Trigger: AAAACATGATAGAGACACTCATTGCCTTTGGGGCCA...GGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR TCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCCCCCATAAACATTCCTaGTGCTTCTCTTACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFPHKHS*CFSYRW Trigger: CCATCTGTAAGAGAAGCATCAGGAATGTTTATGGGG...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTTCTTTTGGATCTGAGTaGTGGGTTTGGACCAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSSFGSE*WVWTKW Trigger: CCACTTGGTCCAAACCCAGCACTCAGATCCAAAAGA...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCGTTTCCCTTAGGAGCTaGTATTCTGGCAGCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFVSLRS*YSGSMI Trigger: AATCATGCTGCCAGAATACCAGCTCCTAAGGGAAAC...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTGCTTCTCTTACAGATaGCCTCGAGGGTTAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFCFSYR*PRGLKV Trigger: AACCTTTAACCCTCGAGGCCATCTGTAAGAGAAGCA...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTGCTTCTCTTACAGATaGCCTCGAGGGTTAAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRCFSYR*PRGLKV Trigger: AACCTTTAACCCTCGAGGCCATCTGTAAGAGAAGCA...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | ATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCCATAGATGCCATATATaGAGTTCCAGAGCTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ISGYLSSQKQEFALLRFSHRCHI*SSRALP Trigger: CGGCAAAGCTCTGGAACTCCATATATGGCATCTATG...GGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCCATAGATGCCATATATaGAGTTCCAGAGCTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VISGYLSSQKQEFALLRFHRCHI*SSRALP Trigger: CGGCAAAGCTCTGGAACTCCATATATGGCATCTATG...GAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGCATAGATGCCATATATaGAGTTCCAGAGCTTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRHRCHI*SSRALP Trigger: CGGCAAAGCTCTGGAACTCCATATATGGCATCTATG...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR TCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGCCCCATAAACATTCCTaGTGCTTCTCTTACAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLPHKHS*CFSYRW Trigger: CCATCTGTAAGAGAAGCATCAGGAATGTTTATGGGG...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTAAGATAGGCTGTGTCTaGTTACATGACATCGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSKIGCV*LHDIVA Trigger: AGCGACGATGTCATGTAAGCAGACACAGCCTATCTT...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079624.12 |
||
| CDS-3UTR GCA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGGTCTTAAAGGATAAGTaGGGTAAAGTAGTCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QVISGYLSSQKQEFALLRVLKDK*GKVVWP Trigger: TGGCCAGACTACTTTACCGCACTTATCCTTTAAGAC...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGGTTTCCCTTAGGAGCTaGTATTCTGGCAGCATGATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLYVAVGSEVQVISGYLVSLRS*YSGSMI Trigger: AATCATGCTGCCAGAATACCAGCTCCTAAGGGAAAC...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTGAAGGTACATGTAAATaGGAGACTCCCCATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSEGTCK*ETPHFL Trigger: CAAGAAATGGGGAGTCTCCCATTTACATGTACCTTC...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR GCA 90 bp | TTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTAGCGAATCCCCTGTTTATTaGTCAGTCTTAAAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: LYVAVGSEVQVISGYLSSESPVY*SVLKDK Trigger: CTTATCCTTTAAGACTGAGCAATAAACAGGGGATTC...GCTAGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR GCA 90 bp | AGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTGAATCCCCTGTTTATTaGTCAGTCTTAAAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYVAVGSEVQVISGYLSESPVY*SVLKDK Trigger: CTTATCCTTTAAGACTGAGCAATAAACAGGGGATTC...AGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS GCA 90 bp | GCAGACGGATGCAGCCCACCCCCGCTGCCAGCAGTCGGCCGACTTTaGTCGATGCAGTACACACGGCCAGCTTCAGAGCTGTGTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ADGCSPPPLPAVGRL*SMQYTRPASELCFR Trigger: CCGGAAACACAGCTCTGAAGCTGGCCGTGTGTACTGCATCGAGCAAAGTCGGCCGACTGCTGGCAGCGGGGGTGGGCTGCATCCGTCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | AGCATGCCTCGTGCAGAGCTGTCTGGCCTTCATGGTCCTGGGCATTaGCCTGGGCTCCGTTATTTAGCAGCAGACGGATGCAGCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SMPRAELSGLHGPGH*PGLRYLAADGCSPP Trigger: GGGTGGGCTGCATCCGTCTGCTGCTAAATAACGGAGCCCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGAGGCATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS CCA 90 bp | CCTCCAAAGCATGCCTCGTGCAGAGCTGTCTGGCCTTCATGGTCCTaGGCATTGACCTGGGCTCCGTTATTTAGCAGCAGACGGATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPKHASCRAVWPSWS*ALTWAPLFSSRRMQ Trigger: CTGCATCCGTCTGCTGCTAAATAACGGAGCCCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | CTCGGCGGCCAGATGGATGGGAAAGATAGGCTGTGTCTGCTTACATaGCATCGTCGCTGTGGGTGTGTTCTGAGAGGAGGAGGGTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGGQMDGKDRLCLLT*HRRCGCVLRGGGYP Trigger: AGGGTACCCTCCTCCTCTCAGAACACACCCACAGCGACGATGTCATGTAAGCAGACACAGCCTATCTTTCCCATCCATCTGGCCGCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079624.12 |
||
| CDS CCA 90 bp | ATGATCGCTTCTCTGCCTCCAAAGCATGCCTCGTGCAGAGCTGTCTaGCCTTCATGGTCCTGGGCATTGACCTGGGCTCCGTTATTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MIASLPPKHASCRAV*PSWSWALTWAPLFS Trigger: GCTAAATAACGGAGCCCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGGAGGCAGAGAAGCGATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | TTGGACCAAGTGGTAGAAGAGGCTGGCCAGTTAAGCAGCATCAGGTaGAGGGTAGTGAAGCCTTGGGCGTCCCTTACTTCTGGGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LDQVVEEAGQLSSIR*RVVKPWASLTSGSA Trigger: TGCTGACCCAGAAGTAAGGGACGCCCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAACTGGCCAGCCTCTTCTACCACTTGGTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | GGAGAGAACTGGGTAGGTCCCGTGTATTATGGCCAGGTGGAGGGCTaGATGCTTGTTGCTGTTGTCTACCCGGGCATTAACTTGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GENWVGPVYYGQVEG*MLVAVVYPGINLSS Trigger: GGAGCTCAAGTTAATGCCCGGGTAGACAACAGCAACAAGCATTCAGCCCTCCACCTGGCCATAATACACGGGACCTACCCAGTTCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS CCA 90 bp | CATTTTGAGCCAAAAAGGAGAGAACTGGGTAGGTCCCGTGTATTATaGCCAGGTGGAGGGCTGAATGCTTGTTGCTGTTGTCTACCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HFEPKRRELGRSRVL*PGGGLNACCCCLPG Trigger: CCCGGGTAGACAACAGCAACAAGCATTCAGCCCTCCACCTGGCCATAATACACGGGACCTACCCAGTTCTCTCCTTTTTGGCTCAAAATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | TGGAGGGCTGAATGCTTGTTGCTGTTGTCTACCCGGGCATTAACTTaGGCTCCGTGGTCACACAAAATGCACAGACACAAGACAGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WRAECLLLLSTRALT*APWSHKMHRHKTAL Trigger: CAACGCTGTCTTGTGTCTGTGCATTTTGTGTGACCACGGAGCTCAAGTTAATGCCCGGGTAGACAACAGCAACAAGCATTCAGCCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGATGGCACAGTTCACATaGGCCCCAAAGGCAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GYLSSQKQEFALLRFSGRMAQFT*APKAMS Trigger: ACTCATTGCCTTTGGGGCCAATGTGAACTGTGCCAT...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS GCA 90 bp | CAGGTAGGTGAGGTCATAGATGCCATATATGGAGTTCCAGAGCTTTaGCGGGAGGAGCTTCTCGAGGTGGAATTTGTACTTCTCCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: QVGEVIDAIYGVPEL*REELLEVEFVLLPI Trigger: TATGGGGAGAAGTACAAATTCCACCTCGAGAAGCTCCTCCCGGCAAAGCTCTGGAACTCCATATATGGCATCTATGACCTCACCTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | GGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCAGGGTCCATCAGGATCTTTaGGATCTGAGTGCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GYLSSQKQEFALLRFSGRVHQDL*DLSAGF Trigger: AAACCCAGCACTCAGATCCAAAAGATCCTGATGGAC...CCTGCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCGACCTGGGCACCATTTaGAGCCAAAAAGGAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGYLSSQKQEFALLRFSGDLGTI*SQKGEN Trigger: GTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTC...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGGCATGGCACAGTTCACATaGGCCCCAAAGGCAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGYLSSQKQEFALLRFSGMAQFT*APKAMS Trigger: ACTCATTGCCTTTGGGGCCAATGTGAACTGTGCCAT...GCCGGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS TCA 90 bp | AAGGATAAGTGCGGTAAAGTAGTCTGGCCAGAAGCGATCTGTCTCTaGTGTTGGAACTGCGCTGAAGGTACATGTAAATGGGAGACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KDKCGKVVWPEAICL*CWNCAEGTCKWETP Trigger: GGGAGTCTCCCATTTACATGTACCTTCAGCGCAGTTCCAACATCAGAGACAGATCGCTTCTGGCCAGACTACTTTACCGCACTTATCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGATGGCACAGTTCACATaGGCCCCAAAGGCAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RASSLYVAVGSEVQVISGMAQFT*APKAMS Trigger: ACTCATTGCCTTTGGGGCCAATGTGAACTGTGCCAT...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGATGGTCAGGGGCTGGTaGACAGGGTGGTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QVISGYLSSQKQEFALLRMVRGW*TGWFLR Trigger: TCTCAGAAACCACCCTGTCAACCAGCCCCTGACCAT...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
||
| CDS-3UTR CAA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGCAAGCAAAGCAAACTTaGTGGCTTGCGGTACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QVISGYLSSQKQEFALLRQAKQT*WLAVLG Trigger: GCCGAGTACCGCAAGCCACAAAGTTTGCTTTGCTTG...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS CCA 90 bp | ATGAGTGTCTCTATCATGTTTTTGTTCAGTATGTCTGCAGCCATGTaGAGGGGCGTCATGCTGGATTCATTAGTAGCATTGACCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSVSIMFLFSMSAAM*RGVMLDSLVALTWA Trigger: TGCCCAGGTCAATGCTACTAATGAATCCAGCATGACGCCCCTCCACATGGCTGCAGACATACTGAACAAAAACATGATAGAGACACTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGCAAGCAAAGCAAACTTaGTGGCTTGCGGTACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLYVAVGSEVQVISGYLQAKQT*WLAVLG Trigger: GCCGAGTACCGCAAGCCACAAAGTTTGCTTTGCTTG...CAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | TTAAGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTCAAGCAAAGCAAACTTaGTGGCTTGCGGTACTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LRASSLYVAVGSEVQVISQAKQT*WLAVLG Trigger: GCCGAGTACCGCAAGCCACAAAGTTTGCTTTGCTTG...AGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGTTCTCCGACCTGGGCACCATTTaGAGCCAAAAAGGAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISGYLSSQKQEFALLRFSDLGTI*SQKGEN Trigger: GTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTC...GGAGAACCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | CAAGTGATTTCTGGGTATCTGTCTAGCCAGAAACAAGAGTTTGCATTGCTGAGGGACCTGGGCACCATTTaGAGCCAAAAAGGAGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QVISGYLSSQKQEFALLRDLGTI*SQKGEN Trigger: GTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTC...CCTCAGCAATGCAAACTCTTGTTTCTGGCTAGACAGATACCCAGAAATCACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | TTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTATCTGTCTAGCGTCCATCAGGATCTTTaGGATCTGAGTGCTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYVAVGSEVQVISGYLSSVHQDL*DLSAGF Trigger: AAACCCAGCACTCAGATCCAAAAGATCCTGATGGAC...GCTAGACAGATACCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCAGTAGTTTGTACGTTGCAGTAGGAAGTGAAGTCCAAGTGATTTCTGGGTTTCTGAGAAGTGTCTaGATGGTGTTACAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASSLYVAVGSEVQVISGFLRSV*MVLQSS Trigger: GGAAGACTGTAACACCATCAAGACACTTCTCAGAAA...CCCAGAAATCACTTGGACTTCACTTCCTACTGCAACGTACAAACTACTGGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS TCA 90 bp | ATAACTTTACTAGGGTTTCCCTTAGGAGCTGGTATTCTGGCAGCATaGTTCCTGCTGGTAGAATCCCCTGTTTATTGCTCAGTCTTAAAG | + |
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Preference number: 5 (lower is better) Translates to: ITLLGFPLGAGILAA*FLLVESPVYCSVLK Trigger: CTTTAAGACTGAGCAATAAACAGGGGATTCTACCAGCAGGAATCATGCTGCCAGAATACCAGCTCCTAAGGGAAACCCTAGTAAAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | AGTGCAGGGTCGTGGCCAGGCTCTCCTCCACCAACGTaGCACCGTCAGCCACCAGGTCTCTGCTTCCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SAGSWPGSPPPT*HRQPPGLCFLS Trigger: AGAGAGGAAGCAGAGACCTGGTGGCTGACGGTGCCACGTTGGTGGAGGAGAGCCTGGCCACGACCCTGCACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS CAA 72 bp | ATGCAGCCCACCCCCGCTGCCAGCAGTCGGCCGACTTaGCTCGATGCAGTACACACGGCCAGCTTCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: MQPTPAASSRPT*LDAVHTASFRA Trigger: AGCTCTGAAGCTGGCCGTGTGTACTGCATCGAGCAAAGTCGGCCGACTGCTGGCAGCGGGGGTGGGCTGCAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | AGCAGACGGATGCAGCCCACCCCCGCTGCCAGCAGTCGGCCGACTTaGCTCGATGCAGTACACACGGCCAGCTTCAGAGCTGTGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: SRRMQPTPAASSRPT*LDAVHTASFRAVFP Trigger: CGGAAACACAGCTCTGAAGCTGGCCGTGTGTACTGCATCGAGCAAAGTCGGCCGACTGCTGGCAGCGGGGGTGGGCTGCATCCGTCTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | AAGCATGCCTCGTGCAGAGCTGTCTGGCCTTCATGGTCCTGGGCATaGACCTGGGCTCCGTTATTTAGCAGCAGACGGATGCAGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: KHASCRAVWPSWSWA*TWAPLFSSRRMQPT Trigger: GGTGGGCTGCATCCGTCTGCTGCTAAATAACGGAGCCCAGGTCAATGCCCAGGACCATGAAGGCCAGACAGCTCTGCACGAGGCATGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS GCA 72 bp | CAAGAGACTGATGATCGCTTCTCTGCCTCCAAAGCATaGCTCGTGCAGAGCTGTCTGGCCTTCATGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QETDDRFSASKA*LVQSCLAFMVL Trigger: CAGGACCATGAAGGCCAGACAGCTCTGCACGAGGCATGCTTTGGAGGCAGAGAAGCGATCATCAGTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | GACCTGGGCACCATTTTGAGCCAAAAAGGAGAGAACTaGGTAGGTCCCGTGTATTATGGCCAGGTGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: DLGTILSQKGEN*VGPVYYGQVEG Trigger: GCCCTCCACCTGGCCATAATACACGGGACCTACCCAGTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | AGCAAACTTTGTGGCTTGCGGTACTCGGCGGCCAGATaGATGGGAAAGATAGGCTGTGTCTGCTGGCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SKLCGLRYSAAR*MGKIGCVCWLS Trigger: ACTGAGCCAGCAGACACAGCCTATCTTTCCCATCCATCTGGCCGCCGAGTACCGCAAGCCACAAAGTTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS CAA 72 bp | CCAGTTAAGCAGCATCAGGTGAAGGGTAGTGAAGCCTaGGGCGTCCCTTACTTCTGGGTCAGCACCGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PVKQHQVKGSEA*GVPYFWVSTVL Trigger: CAACACGGTGCTGACCCAGAAGTAAGGGACGCCCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | GTCTGCTTACATGACATCGTCGCTGTGGGTGTGTTCTaGGAGGAGGAGGGTACCCTTCTTCCAGCCACACAA | + |
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Preference number: 6 (lower is better) Translates to: VCLHDIVAVGVF*EEEGTLLPATQ Trigger: TTGTGTGGCTGGAAGAAGGGTACCCTCCTCCTCTCAGAACACACCCACAGCGACGATGTCATGTAAGCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079624.12 |
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| CDS TCA 72 bp | GTGGTAGAAGAGGCTGGCCAGTTAAGCAGCATCAGGTaGAGGGTAGTGAAGCCTTGGGCGTCCCTTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: VVEEAGQLSSIR*RVVKPWASLTS Trigger: AGAAGTAAGGGACGCCCAAGGCTTCACTACCCTTCACCTGATGCTGCTTAACTGGCCAGCCTCTTCTACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | TCTGGGTCAGCACCGTGTTGTAACAAGCAAAGCAAACTTTGTGGCTaGCGGTACTCGGCGGCCAGATGGATGGGAAAGATAGGCTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SGSAPCCNKQSKLCG*RYSAARWMGKIGCV Trigger: GACACAGCCTATCTTTCCCATCCATCTGGCCGCCGAGTACCGCAAGCCACAAAGTTTGCTTTGCTTGTTACAACACGGTGCTGACCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | ACACACGGCCAGCTTCAGAGCTGTGTTTCCGGTAGATaGGATGGCACAGTTCACATTGGCCCCAAAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: THGQLQSCVSGR*DGTVHIGPKGN Trigger: ATTGCCTTTGGGGCCAATGTGAACTGTGCCATCTCATCTACCGGAAACACAGCTCTGAAGCTGGCCGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | CTGAGTGCTGGGTTTGGACCAAGTGGTAGAAGAGGCTaGCCAGTTAAGCAGCATCAGGTGAAGGGTAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSAGFGPSGRRG*PVKQHQVKGSE Trigger: TTCACTACCCTTCACCTGATGCTGCTTAACTGGCCAGCCTCTTCTACCACTTGGTCCAAACCCAGCACTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | GAGTTGGCCAGGATGGTCAGGGGCTGGTTGACAGGGTaGTTTCTGAGAAGTGTCTTGATGGTGTTACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: ELARMVRGWLTG*FLRSVLMVLQS Trigger: AGACTGTAACACCATCAAGACACTTCTCAGAAACCACCCTGTCAACCAGCCCCTGACCATCCTGGCCAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS TCA 72 bp | CAGATGGATGGGAAAGATAGGCTGTGTCTGCTTACATaGCATCGTCGCTGTGGGTGTGTTCTGAGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: QMDGKDRLCLLT*HRRCGCVLRGG Trigger: TCCTCCTCTCAGAACACACCCACAGCGACGATGTCATGTAAGCAGACACAGCCTATCTTTCCCATCCATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079624.12 |
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| CDS CCA 72 bp | CCAAAAAGGAGAGAACTGGGTAGGTCCCGTGTATTATaGCCAGGTGGAGGGCTGAATGCTTGTTGCTGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PKRRELGRSRVL*PGGGLNACCCC Trigger: ACAACAGCAACAAGCATTCAGCCCTCCACCTGGCCATAATACACGGGACCTACCCAGTTCTCTCCTTTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 72 bp | GCACCGTGTTGTAACAAGCAAAGCAAACTTTGTGGCTaGCGGTACTCGGCGGCCAGATGGATGGGAAAGATA | + |
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Preference number: 6 (lower is better) Translates to: APCCNKQSKLCG*RYSAARWMGKI Trigger: TATCTTTCCCATCCATCTGGCCGCCGAGTACCGCAAGCCACAAAGTTTGCTTTGCTTGTTACAACACGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | GCACAGACACAAGACAGCGTTGTTCTGAATGTCCATCAGGATCTTTaGGATCTGAGTGCTGGGTTTGGACCAAGTGGTAGAAGAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AQTQDSVVLNVHQDL*DLSAGFGPSGRRGW Trigger: CCAGCCTCTTCTACCACTTGGTCCAAACCCAGCACTCAGATCCAAAAGATCCTGATGGACATTCAGAACAACGCTGTCTTGTGTCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | GGGCGTCATGCTGGATTCATTAGTAGCATTGACCTGGGCACCATTTaGAGCCAAAAAGGAGAGAACTGGGTAGGTCCCGTGTATTATGGC | + |
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Preference number: 6 (lower is better) Translates to: GRHAGFISSIDLGTI*SQKGENWVGPVYYG Trigger: GCCATAATACACGGGACCTACCCAGTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTCAATGCTACTAATGAATCCAGCATGACGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | ACAGGGTGGTTTCTGAGAAGTGTCTTGATGGTGTTACAGTCTTCCTaGATGATGGCCTCATACAGTTTAGAGTGCAGGGTCGTGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TGWFLRSVLMVLQSS*MMASYSLECRVVAR Trigger: CCTGGCCACGACCCTGCACTCTAAACTGTATGAGGCCATCATCAAGGAAGACTGTAACACCATCAAGACACTTCTCAGAAACCACCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS CAA 72 bp | GCTGGATTCATTAGTAGCATTGACCTGGGCACCATTTaGAGCCAAAAAGGAGAGAACTGGGTAGGTCCCGTG | + |
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Preference number: 6 (lower is better) Translates to: AGFISSIDLGTI*SQKGENWVGPV Trigger: CACGGGACCTACCCAGTTCTCTCCTTTTTGGCTCAAAATGGTGCCCAGGTCAATGCTACTAATGAATCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 72 bp | AGGGGCTGGTTGACAGGGTGGTTTCTGAGAAGTGTCTaGATGGTGTTACAGTCTTCCTTGATGATGGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RGWLTGWFLRSV*MVLQSSLMMAS Trigger: TGAGGCCATCATCAAGGAAGACTGTAACACCATCAAGACACTTCTCAGAAACCACCCTGTCAACCAGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS TCA 72 bp | GAATGCTTGTTGCTGTTGTCTACCCGGGCATTAACTTaGGCTCCGTGGTCACACAAAATGCACAGACACAAG | + |
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Preference number: 6 (lower is better) Translates to: ECLLLLSTRALT*APWSHKMHRHK Trigger: CTTGTGTCTGTGCATTTTGTGTGACCACGGAGCTCAAGTTAATGCCCGGGTAGACAACAGCAACAAGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | TGCGGTAAAGTAGTCTGGCCAGAAGCGATCTGTCTCTaGTGTTGGAACTGCGCTGAAGGTACATGTAAATGG | + |
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Preference number: 6 (lower is better) Translates to: CGKVVWPEAICL*CWNCAEGTCKW Trigger: CCATTTACATGTACCTTCAGCGCAGTTCCAACATCAGAGACAGATCGCTTCTGGCCAGACTACTTTACCGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | CTAGGGTTTCCCTTAGGAGCTGGTATTCTGGCAGCATaGTTCCTGCTGGTAGAATCCCCTGTTTATTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LGFPLGAGILAA*FLLVESPVYCS Trigger: TGAGCAATAAACAGGGGATTCTACCAGCAGGAATCATGCTGCCAGAATACCAGCTCCTAAGGGAAACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CAA 90 bp | AGGATGGTCAGGGGCTGGTTGACAGGGTGGTTTCTGAGAAGTGTCTaGATGGTGTTACAGTCTTCCTTGATGATGGCCTCATACAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: RMVRGWLTGWFLRSV*MVLQSSLMMASYSL Trigger: TAAACTGTATGAGGCCATCATCAAGGAAGACTGTAACACCATCAAGACACTTCTCAGAAACCACCCTGTCAACCAGCCCCTGACCATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110717.9 |
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| CDS CAA 90 bp | AGCTTCAGAGCTGTGTTTCCGGTAGATGAGATGGCACAGTTCACATaGGCCCCAAAGGCAATGAGTGTCTCTATCATGTTTTTGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SFRAVFPVDEMAQFT*APKAMSVSIMFLFS Trigger: ACTGAACAAAAACATGATAGAGACACTCATTGCCTTTGGGGCCAATGTGAACTGTGCCATCTCATCTACCGGAAACACAGCTCTGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | CGAGGTGGAATTTGTACTTCTCCCCATAAACATTCCTaGTGCTTCTCTTACAGATGGCCTCGAGGGTTAAAG | + |
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Preference number: 6 (lower is better) Translates to: RGGICTSPHKHS*CFSYRWPRGLK Trigger: CTTTAACCCTCGAGGCCATCTGTAAGAGAAGCATCAGGAATGTTTATGGGGAGAAGTACAAATTCCACCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS CCA 72 bp | TCTATCATGTTTTTGTTCAGTATGTCTGCAGCCATGTaGAGGGGCGTCATGCTGGATTCATTAGTAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: SIMFLFSMSAAM*RGVMLDSLVAL Trigger: CAATGCTACTAATGAATCCAGCATGACGCCCCTCCACATGGCTGCAGACATACTGAACAAAAACATGATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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| CDS TCA 72 bp | ATGAGATGGCACAGTTCACATTGGCCCCAAAGGCAATaGGTGTCTCTATCATGTTTTTGTTCAGTATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: MRWHSSHWPQRQ*VSLSCFCSVCL Trigger: CAGACATACTGAACAAAAACATGATAGAGACACTCATTGCCTTTGGGGCCAATGTGAACTGTGCCATCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079624.12 ENSMUST00000110717.9 ENSMUST00000110718.2 |
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