Pregenerated sensors for ANKRD60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027517Ensembl transcript IDs: ENSMUST00000109112.2, ENSMUST00000119453.9, ENSMUST00000239457.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGACACGGTGGAGGCAAGCGGGTCCCCTGTGTGCCCCCTAACCTGTaGGCGGGCCCTGCTGGAGGGCTGAGTGTGGCGCGCGCCCGCCTT | + |
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Preference number: 5 (lower is better) Translates to: RHGGGKRVPCVPPNL*AGPAGGLSVARARL Trigger: AAGGCGGGCGCGCGCCACACTCAGCCCTCCAGCAGGGCCCGCGCACAGGTTAGGGGGCACACAGGGGACCCGCTTGCCTCCACCGTGTCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS GCA 90 bp | GGATGGAGGCACCATGTTCCAGTAAGGGCTGGACGCAGTCTGTCCTaGCCATGGCTGCGACCACGTGCAGGGGCGTCCTGCCCAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GWRHHVPVRAGRSLS*PWLRPRAGASCPGV Trigger: CACCCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCAGCCCTTACTGGAACATGGTGCCTCCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CCA 90 bp | AGGCACCATGTTCCAGTAAGGGCTGGACGCAGTCTGTCCTGCCCATaGCTGCGACCACGTGCAGGGGCGTCCTGCCCAGGGGTGATTTGG | + |
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Preference number: 5 (lower is better) Translates to: RHHVPVRAGRSLSCP*LRPRAGASCPGVIW Trigger: CCAAATCACCCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCAGCCCTTACTGGAACATGGTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CCA 90 bp | CTCCTCCAGCTTCACCCGCAGGACATAGACGTCAGGAGTCAAGTCTaGCGACACGGTGGAGGCAAGCGGGTCCCCTGTGTGCCCCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: LLQLHPQDIDVRSQV*RHGGGKRVPCVPPN Trigger: GTTAGGGGGCACACAGGGGACCCGCTTGCCTCCACCGTGTCGCCAGACTTGACTCCTGACGTCTATGTCCTGCGGGTGAAGCTGGAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS CCA 90 bp | CCATGGCTGCGACCACGTGCAGGGGCGTCCTGCCCAGGGGTGATTTaGCCAGGCAGTTTGCTCCAAGTCCTAGAAGATACTGCACGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PWLRPRAGASCPGVI*PGSLLQVLEDTARH Trigger: ATGCCGTGCAGTATCTTCTAGGACTTGGAGCAAACTGCCTGGCCAAATCACCCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CCA 90 bp | TTCAAGTCTCTGTCATGGATGGAGGCACCATGTTCCAGTAAGGGCTaGACGCAGTCTGTCCTGCCCATGGCTGCGACCACGTGCAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: FKSLSWMEAPCSSKG*TQSVLPMAATTCRG Trigger: GCCCCTGCACGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCAGCCCTTACTGGAACATGGTGCCTCCATCCATGACAGAGACTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 90 bp | GCTCCAAGTCCTAGAAGATACTGCACGGCATCCACGTGGCCTCTGTaGGCAGAGATGTACAAGGCCACAAATGCCCTCTGGGCTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: APSPRRYCTASTWPL*AEMYKATNALWAVH Trigger: GTGGACAGCCCAGAGGGCATTTGTGGCCTTGTACATCTCTGCTCACAGAGGCCACGTGGATGCCGTGCAGTATCTTCTAGGACTTGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 90 bp | ACATCTTGTGCTCTAAATGTCCTCGCTTCAGGCGCCGCGCAATGGTaGTGGGCGTGTCGCTCTTCAAGTCTCTGTCATGGATGGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: TSCALNVLASGAAQW*WACRSSSLCHGWRH Trigger: GTGCCTCCATCCATGACAGAGACTTGAAGAGCGACACGCCCATCACCATTGCGCGGCGCCTGAAGCGAGGACATTTAGAGCACAAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 90 bp | CCTCTGGGCTGTCCACTGCCTCCACTGTTCCCCCTTAAAATGCTGTaGGTTCGCTGTTCGGTAGAAGGTATCCTCGCTGATGCCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: PLGCPLPPLFPLKML*VRCSVEGILADAKT Trigger: TGTCTTGGCATCAGCGAGGATACCTTCTACCGAACAGCGAACTCACAGCATTTTAAGGGGGAACAGTGGAGGCAGTGGACAGCCCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS GCA 90 bp | GTAGCATCATCCATCAGAATTCCTCGGTCCAGGAAATGCAGCCGCTaGAGGTTGAAGGGGATGCCGACCATCAGGTCCAGCTCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: VASSIRIPRSRKCSR*RLKGMPTIRSSSSL Trigger: CAAAGAAGAGCTGGACCTGATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTCTGATGGATGATGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS GCA 72 bp | TGGACGCAGTCTGTCCTGCCCATGGCTGCGACCACGTaGAGGGGCGTCCTGCCCAGGGGTGATTTGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WTQSVLPMAATT*RGVLPRGDLAR Trigger: CCTGGCCAAATCACCCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CCA 72 bp | GTTCCAGTAAGGGCTGGACGCAGTCTGTCCTGCCCATaGCTGCGACCACGTGCAGGGGCGTCCTGCCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VPVRAGRSLSCP*LRPRAGASCPG Trigger: CCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCAGCCCTTACTGGAAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 90 bp | CCCATGGCTGCGACCACGTGCAGGGGCGTCCTGCCCAGGGGTGATTaGGCCAGGCAGTTTGCTCCAAGTCCTAGAAGATACTGCACGGCA | + |
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Preference number: 6 (lower is better) Translates to: PMAATTCRGVLPRGD*ARQFAPSPRRYCTA Trigger: TGCCGTGCAGTATCTTCTAGGACTTGGAGCAAACTGCCTGGCCAAATCACCCCTGGGCAGGACGCCCCTGCACGTGGTCGCAGCCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 90 bp | TCCAGCTCTTCTTTGAGCTCCCGCACTGTCATGTCGTTGCGGCAGTaGGCCACGCGGAACAGCTCCCCAGTCTCCTCCAGCTTCACCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSSSLSSRTVMSLRQ*ATRNSSPVSSSFTR Trigger: GCGGGTGAAGCTGGAGGAGACTGGGGAGCTGTTCCGCGTGGCCAACTGCCGCAACGACATGACAGTGCGGGAGCTCAAAGAAGAGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS CCA 72 bp | CTTCACCCGCAGGACATAGACGTCAGGAGTCAAGTCTaGCGACACGGTGGAGGCAAGCGGGTCCCCTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: LHPQDIDVRSQV*RHGGGKRVPCV Trigger: CACACAGGGGACCCGCTTGCCTCCACCGTGTCGCCAGACTTGACTCCTGACGTCTATGTCCTGCGGGTGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS CAA 72 bp | TCTTTGAGCTCCCGCACTGTCATGTCGTTGCGGCAGTaGGCCACGCGGAACAGCTCCCCAGTCTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLSSRTVMSLRQ*ATRNSSPVSSS Trigger: GCTGGAGGAGACTGGGGAGCTGTTCCGCGTGGCCAACTGCCGCAACGACATGACAGTGCGGGAGCTCAAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS CAA 90 bp | ACCATCAGGTCCAGCTCTTCTTTGAGCTCCCGCACTGTCATGTCGTaGCGGCAGTTGGCCACGCGGAACAGCTCCCCAGTCTCCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TIRSSSSLSSRTVMS*RQLATRNSSPVSSS Trigger: GCTGGAGGAGACTGGGGAGCTGTTCCGCGTGGCCAACTGCCGCAACGACATGACAGTGCGGGAGCTCAAAGAAGAGCTGGACCTGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS CCA 72 bp | CTGTCATGGATGGAGGCACCATGTTCCAGTAAGGGCTaGACGCAGTCTGTCCTGCCCATGGCTGCGACCACG | + |
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Preference number: 6 (lower is better) Translates to: LSWMEAPCSSKG*TQSVLPMAATT Trigger: CGTGGTCGCAGCCATGGGCAGGACAGACTGCGTCCAGCCCTTACTGGAACATGGTGCCTCCATCCATGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 72 bp | GCGACCACGTGCAGGGGCGTCCTGCCCAGGGGTGATTaGGCCAGGCAGTTTGCTCCAAGTCCTAGAAGATAC | + |
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Preference number: 6 (lower is better) Translates to: ATTCRGVLPRGD*ARQFAPSPRRY Trigger: GTATCTTCTAGGACTTGGAGCAAACTGCCTGGCCAAATCACCCCTGGGCAGGACGCCCCTGCACGTGGTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 72 bp | TCCAGCTCTTCTTTGAGCTCCCGCACTGTCATGTCGTaGCGGCAGTTGGCCACGCGGAACAGCTCCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSLSSRTVMS*RQLATRNSSPV Trigger: GACTGGGGAGCTGTTCCGCGTGGCCAACTGCCGCAACGACATGACAGTGCGGGAGCTCAAAGAAGAGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119453.9 |
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| CDS GCA 72 bp | TCCATCAGAATTCCTCGGTCCAGGAAATGCAGCCGCTaGAGGTTGAAGGGGATGCCGACCATCAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SIRIPRSRKCSR*RLKGMPTIRSS Trigger: GCTGGACCTGATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTCTGATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 72 bp | TCCTCCCTACCAAGTCCGGGTCCCGGGACCCCGACTTaGCCATCCAGTAGAGAAGGAACATCTTGTGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: SSLPSPGPGTPT*PSSREGTSCAL Trigger: TAGAGCACAAGATGTTCCTTCTCTACTGGATGGTCAAGTCGGGGTCCCGGGACCCGGACTTGGTAGGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 72 bp | GAATTCCTCGGTCCAGGAAATGCAGCCGCTGCAGGTTaGAGGGGATGCCGACCATCAGGTCCAGCTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: EFLGPGNAAAAG*RGCRPSGPALL Trigger: AAGAAGAGCTGGACCTGATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 72 bp | AGAATTCCTCGGTCCAGGAAATGCAGCCGCTGCAGGTaGAAGGGGATGCCGACCATCAGGTCCAGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RIPRSRKCSRCR*KGMPTIRSSSS Trigger: AGAAGAGCTGGACCTGATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CAA 90 bp | TCATCCATCAGAATTCCTCGGTCCAGGAAATGCAGCCGCTGCAGGTaGAAGGGGATGCCGACCATCAGGTCCAGCTCTTCTTTGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSIRIPRSRKCSRCR*KGMPTIRSSSSLSS Trigger: GGAGCTCAAAGAAGAGCTGGACCTGATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTCTGATGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 72 bp | CCTAGAAGATACTGCACGGCATCCACGTGGCCTCTGTaGGCAGAGATGTACAAGGCCACAAATGCCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PRRYCTASTWPL*AEMYKATNALW Trigger: CCAGAGGGCATTTGTGGCCTTGTACATCTCTGCTCACAGAGGCCACGTGGATGCCGTGCAGTATCTTCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS GCA 72 bp | GTAGCATCATCCATCAGAATTCCTCGGTCCAGGAAATaGAGCCGCTGCAGGTTGAAGGGGATGCCGACCATC | + |
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Preference number: 6 (lower is better) Translates to: VASSIRIPRSRK*SRCRLKGMPTI Trigger: GATGGTCGGCATCCCCTTCAACCTGCAGCGGCTGCATTTCCTGGACCGAGGAATTCTGATGGATGATGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 72 bp | GCTGTGAGTTCGCTGTTCGGTAGAAGGTATCCTCGCTaGTGCCAAGACATGACATCTTGCTGGGGTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: AVSSLFGRRYPR*CQDMTSCWGPL Trigger: AAGGGGACCCCAGCAAGATGTCATGTCTTGGCATCAGCGAGGATACCTTCTACCGAACAGCGAACTCACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS GCA 72 bp | ATGTACAAGGCCACAAATGCCCTCTGGGCTGTCCACTaGCTCCACTGTTCCCCCTTAAAATGCTGTGAGTTC | + |
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Preference number: 6 (lower is better) Translates to: MYKATNALWAVH*LHCSPLKCCEF Trigger: GAACTCACAGCATTTTAAGGGGGAACAGTGGAGGCAGTGGACAGCCCAGAGGGCATTTGTGGCCTTGTACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS CCA 72 bp | TTAATATTGTGCTCCTCCTGGTCGCCATCCCAGGGCTaGATTTCTCCAAAGCTTTCCTCCCTACCAAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LILCSSWSPSQG*ISPKLSSLPSP Trigger: CGGACTTGGTAGGGAGGAAAGCTTTGGAGAAATCCAGCCCTGGGATGGCGACCAGGAGGAGCACAATATTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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| CDS TCA 72 bp | TGTCCACTGCCTCCACTGTTCCCCCTTAAAATGCTGTaGGTTCGCTGTTCGGTAGAAGGTATCCTCGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: CPLPPLFPLKML*VRCSVEGILAD Trigger: ATCAGCGAGGATACCTTCTACCGAACAGCGAACTCACAGCATTTTAAGGGGGAACAGTGGAGGCAGTGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109112.2 ENSMUST00000119453.9 ENSMUST00000239457.2 |
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