Pregenerated sensors for ANKRD55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049985Ensembl transcript IDs: ENSMUST00000022275.14, ENSMUST00000056047.14, ENSMUST00000165593.9, ENSMUST00000168684.2, ENSMUST00000223871.2
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGCTGGTaGAGGCTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: CVSFHGACGQSRLCW*RLWGPYPGRLHSGL Trigger: CAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| 3UTR GCA 90 bp | GCTAACTTAGGGTCTAGACATCCCCAGCGTGCAGACGCAGCACTCTaGTTCACACGTGGGCACAGACTGATCAGTGCACCCATCTTGACC | + |
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Preference number: 1 (lower is better) Translates to: ANLGSRHPQRADAAL*FTRGHRLISAPILT Trigger: GGTCAAGATGGGTGCACTGATCAGTCTGTGCCCACGTGTGAAGCAGAGTGCTGCGTCTGCACGCTGGGGATGTCTAGACCCTAAGTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 90 bp | TCACAGGAACTGTGCAAGCCATCCCTAGGAACATTGCTTTCTCCTTaGGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SQELCKPSLGTLLSP*VSFHGACGQSRLCW Trigger: CCAGCACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAATGTTCCTAGGGATGGCTTGCACAGTTCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| 3UTR GCA 90 bp | ATCTGCTCAACTGCTAGCATTAGCCATTGGCCAAGACCTAAAACCTaGACCAGTGCTGTGCTGCTGGCCACCCACAATGAAGGACTCTAC | + |
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Preference number: 1 (lower is better) Translates to: ICSTASISHWPRPKT*TSAVLLATHNEGLY Trigger: GTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATGGCTAATGCTAGCAGTTGAGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CCA 90 bp | GTTGCTGAACTCACATATATCTGCTCAACTGCTAGCATTAGCCATTaGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: VAELTYICSTASISH*PRPKTCTSAVLLAT Trigger: GGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATGGCTAATGCTAGCAGTTGAGCAGATATATGTGAGTTCAGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CCA 90 bp | ACCAGAGGTCTTTTAAAGATCTGTGTTCATCTCGGCTTCGGTGGGTaGAGTAGGGCGATGGAGAACTATGATTTGCTTGGGACACTACTA | + |
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Preference number: 1 (lower is better) Translates to: TRGLLKICVHLGFGG*SRAMENYDLLGTLL Trigger: TAGTAGTGTCCCAAGCAAATCATAGTTCTCCATCGCCCTACTCCACCCACCGAAGCCGAGATGAACACAGATCTTTAAAAGACCTCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 90 bp | CCTCTGACTCCTGAGTTATCCTGGGATCAAAGGCATGCACCACTCTaGCTCTCAGTTGTTTGTTTGTTTAAACAGAGATCACTTTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLTPELSWDQRHAPL*LSVVCLFKQRSLCL Trigger: CAGGCAAAGTGATCTCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTGGTGCATGCCTTTGATCCCAGGATAACTCAGGAGTCAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 90 bp | AACCAAGCTAAATTTGAAAGACAAATGTTGTGTGGCCATCCTAACTaGCAAGGTACCTCACTGCCCACAGGCCACACTCCTGTTTCTACA | + |
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Preference number: 1 (lower is better) Translates to: NQAKFERQMLCGHPN*QGTSLPTGHTPVST Trigger: TGTAGAAACAGGAGTGTGGCCTGTGGGCAGTGAGGTACCTTGGCAGTTAGGATGGCCACACAACATTTGTCTTTCAAATTTAGCTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 90 bp | ACACAACTTGGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATaGACCCAAGACAGGGCTTCCATAGCCTCTGTGTTGATGATACTC | + |
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Preference number: 1 (lower is better) Translates to: TQLGTWEMISKILLP*TQDRASIASVLMIL Trigger: GAGTATCATCAACACAGAGGCTATGGAAGCCCTGTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR TCA 90 bp | CTGATAACTCCCAGTGAAATGATACACAACTTGGAACTTGGGAAATaGTCTCTAAGATCTTACTGCCATGCACCCAAGACAGGGCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LITPSEMIHNLELGK*SLRSYCHAPKTGLP Trigger: TGGAAGCCCTGTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTGTGTATCATTTCACTGGGAGTTATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR TCA 90 bp | TCCCTTGCAGTGCCTCAGAAATTTATTGCCATCACTCTTGAGATCTaGGGTCTGAGAAAAGATGAGCATAAGTTATTGGCAAAACTACTG | + |
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Preference number: 1 (lower is better) Translates to: SLAVPQKFIAITLEI*GLRKDEHKLLAKLL Trigger: CAGTAGTTTTGCCAATAACTTATGCTCATCTTTTCTCAGACCTCAGATCTCAAGAGTGATGGCAATAAATTTCTGAGGCACTGCAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 90 bp | CCACTCTGCCTCTCAGTTGTTTGTTTGTTTAAACAGAGATCACTTTaGCTGAAGAAGAACCAGAGGTCTTTTAAAGATCTGTGTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: PLCLSVVCLFKQRSL*LKKNQRSFKDLCSS Trigger: AGATGAACACAGATCTTTAAAAGACCTCTGGTTCTTCTTCAGGCAAAGTGATCTCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTTGCTGCTCGGCTTCGGTGGGTaGAGTAGGGCGATGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: PLCVVLAPVTFELLARLLLGFGG*SRAMEN Trigger: GTTCTCCATCGCCCTACTCCACCCACCGAAGCCGAG...CAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | TTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTaGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTGGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FPWSLRAVKAVLVKA*GSISRQASFRLGKL Trigger: CAGCTTCCCAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTCCATGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTTGCTGCTGGGATCAAAGGCATaGACCACTCTGCCTCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PLCVVLAPVTFELLARLLLGSKA*TTLPLS Trigger: ACTGAGAGGCAGAGTGGTGCATGCCTTTGATCCCAG...CAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATGAAGGACTCTACTGCGGAGTTCCTGCCCAACCAATaGTTCCTTGCTTGGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PAPVLCCWPPTMKDSTAEFLPNQ*FLAWGD Trigger: ATCTCCCCAAGCAAGGAACCATTGGTTGGGCAGGAA...CTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | GTCACAGGAACTGTGCAAGCCATCCCTAGGAACATTGCTTTCTCCTaGCGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VTGTVQAIPRNIAFS*RQFPWSLRAVKAVL Trigger: CAGCACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAATGTTCCTAGGGATGGCTTGCACAGTTCCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| 3UTR-3UTR TCA 90 bp | CCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATGAAGGACTCTACTGCGGAGTGTAGTTCTGGAGTTTaGTATATACACCAGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PAPVLCCWPPTMKDSTAECSSGV*YIHQAG Trigger: ACCAGCCTGGTGTATATATCAAACTCCAGAACTACA...CTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATGAAGGACTCTACTGCGGAGAAACAGAGATCACTTTaGCTGAAGAAGAACCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PAPVLCCWPPTMKDSTAEKQRSL*LKKNQR Trigger: CCTCTGGTTCTTCTTCAGGCAAAGTGATCTCTGTTT...CTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTTGCTGCTGTCTTCTGAGGTTTaGCTTTGGGTCATTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PLCVVLAPVTFELLARLLLSSEV*LWVIED Trigger: ATCTTCAATGACCCAAAGGCAAACCTCAGAAGACAG...CAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATGAAGGACTCTACTGCGGAGTCTCAGCTTAGAATTTaGTTGGTCAAAATGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PAPVLCCWPPTMKDSTAESQLRI*LVKMLL Trigger: CAGCAGCATTTTGACCAACCAAATTCTAAGCTGAGA...CTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | TCAGGGAGAGGTTCAACCTCAAACCCAAGCTGCAAACAGGGGCTTTaGGGTGTGGTCATCAGGATGATCAGCGAGAGGCCTTTGATGATA | + |
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Preference number: 2 (lower is better) Translates to: SGRGSTSNPSCKQGL*GVVIRMISERPLMI Trigger: TATCATCAAAGGCCTCTCGCTGATCATCCTGATGACCACACCCAAAAGCCCCTGTTTGCAGCTTGGGTTTGAGGTTGAACCTCTCCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | CTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTaGCTGAACTCACATATATCTGCTCAACTGCTAGCATTAGCCATT | + |
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Preference number: 2 (lower is better) Translates to: LCVVLAPVTFELLAR*LNSHISAQLLALAI Trigger: AATGGCTAATGCTAGCAGTTGAGCAGATATATGTGAGTTCAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | CAACTTGGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATGCACCCAAGACTGGTCCTGGCTCCAGTaGCCTTTGAACTTCTGGCGC | + |
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Preference number: 2 (lower is better) Translates to: QLGTWEMISKILLPCTQDWSWLQ*PLNFWR Trigger: GCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCA...GTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR GCA 90 bp | CAACTTGGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATGCACCCAAGACGCACCAGTGCTGTGCTaGTGGCCACCCACAATGAAG | + |
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Preference number: 2 (lower is better) Translates to: QLGTWEMISKILLPCTQDAPVLC*WPPTMK Trigger: CTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGC...GTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR CCA 90 bp | CATTGGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATCGAAGTAGCCAGAGTTaGAATCTGGCTTTAGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: HWPRPKTCTSAVLLATHNRSSQS*NLALEY Trigger: ATACTCTAAAGCCAGATTCCAACTCTGGCTACTTCG...ATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATCCATTCACAGGGGAACAGAGAAATAGACCAAAGTGTTTTCCTAGTGTGACTGCGGAGGTGGGTTaGGCTGGCAAAGCTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: EYPFTGEQRNRPKCFPSVTAEVG*AGKAPE Trigger: TTCAGGAGCTTTGCCAGCTCAACCCACCTCCGCAGT...CACACTAGGAAAACACTTTGGTCTATTTCTCTGTTCCCCTGTGAATGGATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGAGCAGACGCAGCACTCTaGTTCACACGTGGGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGADAAL*FTRGHR Trigger: TCTGTGCCCACGTGTGAAGCAGAGTGCTGCGTCTGC...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGGATGCAGACCTGCCGAGACACTGGTTTAAGAGGAAACTGTGACATTGGATCTGGCTTTAGAGTATaGATGGCTGAGTCACCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SWMQTCRDTGLRGNCDIGSGFRV*MAESPA Trigger: AGCTGGTGACTCAGCCATTCATACTCTAAAGCCAGA...TCCAATGTCACAGTTTCCTCTTAAACCAGTGTCTCGGCAGGTCTGCATCCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGACCTGCCTCTGACTCCTaGGTTATCCTGGGATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGPASDS*VILGSK Trigger: CTTTGATCCCAGGATAACTCAGGAGTCAGAGGCAGG...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATCCATTCACAGGGGAACAGAGAAATAGACCAAAGTGTTTTCCTAGTGTGACACCAGGCTGGTCTTaGACTCACAGAGATCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EYPFTGEQRNRPKCFPSVTPGWS*THRDPP Trigger: AGGAGGATCTCTGTGAGTTCAAGACCAGCCTGGTGT...CACACTAGGAAAACACTTTGGTCTATTTCTCTGTTCCCCTGTGAATGGATACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | TCCTGGGATCAAAGGCATGCACCACTCTGCCTCTCAGTTGTTTGTTaGTTTAAACAGAGATCACTTTGCCTGAAGAAGAACCAGAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SWDQRHAPLCLSVVC*FKQRSLCLKKNQRS Trigger: AGACCTCTGGTTCTTCTTCAGGCAAAGTGATCTCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTGGTGCATGCCTTTGATCCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGACAATGGTTCCTTGCTTaGGGAGATGTCTGTAGCATA | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGQWFLA*GDVCSI Trigger: TATGCTACAGACATCTCCCCAAGCAAGGAACCATTG...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGAACACATCCCTTGCAGTaGCTCAGAAATTTATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGTHPLQ*LRNLLP Trigger: TGGCAATAAATTTCTGAGGCACTGCAAGGGATGTGT...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTATCCATTCACAGGGGAACAGAGAAATAGACCAAAGTGTTTTCCTAGTGTGTTGAGATCTGAGGTCTaGGAAAAGATGAGCATAAGT | + |
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Preference number: 2 (lower is better) Translates to: EYPFTGEQRNRPKCFPSVLRSEV*EKMSIS Trigger: ACTTATGCTCATCTTTTCTCAGACCTCAGATCTCAA...CACACTAGGAAAACACTTTGGTCTATTTCTCTGTTCCCCTGTGAATGGATACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGAAATTGTTTCAGGTCATaGACTCACATAGGACAATCC | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGNCFRS*THIGQS Trigger: GGATTGTCCTATGTGAGTTCATGACCTGAAACAATT...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCCTGAAGATTCTAAGTaGGTATTTAGGGAGTGTATT | + |
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Preference number: 2 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNPEDSK*VFRECI Trigger: AATACACTCCCTAAATACTCACTTAGAATCTTCAGG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGAAGCTTAGAATTTGGTTaGTCAAAATGCTGCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: PCRLMERGCKEVDHEMHGSLEFG*SKCCCD Trigger: ATCACAGCAGCATTTTGACCAACCAAATTCTAAGCT...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | CAAAATGCTGCTGTGATAGCAAGGGAGATTTTTGTTATTGTTGTTTaGAGAGGATCTCTCTATGTAGTTCTGGAGTTTGATATATACACC | + |
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Preference number: 2 (lower is better) Translates to: QNAAVIAREIFVIVV*RGSLYVVLEFDIYT Trigger: GGTGTATATATCAAACTCCAGAACTACATAGAGAGATCCTCTCAAAACAACAATAACAAAAATCTCCCTTGCTATCACAGCAGCATTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CAA 90 bp | ATATGTATAACTCAACAATGCTTGGAGAAGACGCTACTTAGTCTATaGACCAAGCTATATAAATTGGTGTTTTGGGAAACAAGTAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ICITQQCLEKTLLSL*TKLYKLVFWETSRQ Trigger: CTGCCTACTTGTTTCCCAAAACACCAATTTATATAGCTTGGTCAATAGACTAAGTAGCGTCTTCTCCAAGCATTGTTGAGTTATACATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 72 bp | GGGTCTAGACATCCCCAGCGTGCAGACGCAGCACTCTaGTTCACACGTGGGCACAGACTGATCAGTGCACCC | + |
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Preference number: 3 (lower is better) Translates to: GSRHPQRADAAL*FTRGHRLISAP Trigger: GGGTGCACTGATCAGTCTGTGCCCACGTGTGAAGCAGAGTGCTGCGTCTGCACGCTGGGGATGTCTAGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR TCA 72 bp | AACCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATaGAGGACTCTACTGCGGAGGTGGGTTGAGCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: NLHQCCAAGHPQ*RTLLRRWVELA Trigger: TGCCAGCTCAACCCACCTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR TCA 72 bp | AGCCTCTGTGTTGATGATACTCATCGGCAGAGGACCTaGGGCTGGCCTCTGTGTGTGGTCCTGGCTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLCVDDTHRQRT*GWPLCVVLAPV Trigger: CACTGGAGCCAGGACCACACACAGAGGCCAGCCTCAGGTCCTCTGCCGATGAGTATCATCAACACAGAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CCA 72 bp | GGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTaGCCACCCACAATGAAGGACTCTACTGCGGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GQDLKPAPVLCC*PPTMKDSTAEV Trigger: CACCTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR GCA 72 bp | CTGTGCAAGCCATCCCTAGGAACATTGCTTTCTCCTTaGGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: LCKPSLGTLLSP*VSFHGACGQSR Trigger: CCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAATGTTCCTAGGGATGGCTTGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| 3UTR GCA 72 bp | ATTGGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTaGTGGCCACCCACAATGAAGGACTCTACTGCGGAG | + |
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Preference number: 3 (lower is better) Translates to: IGQDLKPAPVLC*WPPTMKDSTAE Trigger: CTCCGCAGTAGAGTCCTTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| 3UTR CCA 72 bp | CCTAGGAACATTGCTTTCTCCTTGCGTCAGTTTCCATaGAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PRNIAFSLRQFP*SLRAVKAVLVK Trigger: CTTCACCAGCACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAATGTTCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATTACACCAGGCTGGTCTaGAACTCACAGAGATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HWPRPKTCTSAVLLATHNYTRLV*NSQRSS Trigger: GGAGGATCTCTGTGAGTTCAAGACCAGCCTGGTGTA...ATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR TCA 72 bp | CTGGCCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTaGACTTCTGGCGCGGTTGCTGAACTCACATATATC | + |
|
Preference number: 3 (lower is better) Translates to: LASVCGPGSSDL*TSGAVAELTYI Trigger: GATATATGTGAGTTCAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR GCA 72 bp | ACTGCTAGCATTAGCCATTGGCCAAGACCTAAAACCTaGACCAGTGCTGTGCTGCTGGCCACCCACAATGAA | + |
|
Preference number: 3 (lower is better) Translates to: TASISHWPRPKT*TSAVLLATHNE Trigger: TTCATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATGGCTAATGCTAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR TCA 72 bp | TGGGTCATTGAAGATCTGTGGAGTGTAGACAGTGTGTaGCCCCACAAATCAGGGAGAGGTTCAACCTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WVIEDLWSVDSV*PHKSGRGSTSN Trigger: GTTTGAGGTTGAACCTCTCCCTGATTTGTGGGGTCACACACTGTCTACACTCCACAGATCTTCAATGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR GCA 72 bp | GGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATaGACCCAAGACAGGGCTTCCATAGCCTCTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTWEMISKILLP*TQDRASIASVL Trigger: CAACACAGAGGCTATGGAAGCCCTGTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CCA 72 bp | CTTTTAAAGATCTGTGTTCATCTCGGCTTCGGTGGGTaGAGTAGGGCGATGGAGAACTATGATTTGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLKICVHLGFGG*SRAMENYDLLG Trigger: CCCAAGCAAATCATAGTTCTCCATCGCCCTACTCCACCCACCGAAGCCGAGATGAACACAGATCTTTAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTAGATTAATGGAAAGGGGATGCAAAGAGGTAGATCATGAAATGCATGGATGCAAACAGGGGCTTTaGGGTGTGGTCATCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PCRLMERGCKEVDHEMHGCKQGL*GVVIRM Trigger: CATCCTGATGACCACACCCAAAAGCCCCTGTTTGCA...TCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGGATGCAGACCTGCCGAGACACTGGTTTAAGAGGAAACTGTGACATTGGAATCAGTGCACCCATCTaGACCCTGATTCTCCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SWMQTCRDTGLRGNCDIGISAPI*TLILLF Trigger: AAAAAGGAGAATCAGGGTCAAGATGGGTGCACTGAT...TCCAATGTCACAGTTTCCTCTTAAACCAGTGTCTCGGCAGGTCTGCATCCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CCA 72 bp | GGGACACTACTAGTTCAGCTTCGAAGTAGCCAGAGTTaGAATCTGGCTTTAGAGTATGAATGGCTGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GTLLVQLRSSQS*NLALEYEWLSH Trigger: GTGACTCAGCCATTCATACTCTAAAGCCAGATTCCAACTCTGGCTACTTCGAAGCTGAACTAGTAGTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR GCA 72 bp | CGGTGCCGTCTAACAACTGTTACACATCCCTTGCAGTaGCTCAGAAATTTATTGCCATCACTCTTGAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: RCRLTTVTHPLQ*LRNLLPSLLRS Trigger: AGATCTCAAGAGTGATGGCAATAAATTTCTGAGGCACTGCAAGGGATGTGTAACAGTTGTTAGACGGCACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR GCA 72 bp | CCTGAGTTATCCTGGGATCAAAGGCATGCACCACTCTaGCTCTCAGTTGTTTGTTTGTTTAAACAGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: PELSWDQRHAPL*LSVVCLFKQRS Trigger: TGATCTCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTGGTGCATGCCTTTGATCCCAGGATAACTCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR GCA 72 bp | AATGACAAGCACCCCTGTAGATTAATGGAAAGGGGATaGAAAGAGGTAGATCATGAAATGCATGGAAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: NDKHPCRLMERG*KEVDHEMHGRR Trigger: GCGTCTTCCATGCATTTCATGATCTACCTCTTTGCATCCCCTTTCCATTAATCTACAGGGGTGCTTGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR TCA 72 bp | CCCAGTGAAATGATACACAACTTGGAACTTGGGAAATaGTCTCTAAGATCTTACTGCCATGCACCCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PSEMIHNLELGK*SLRSYCHAPKT Trigger: TGTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTGTGTATCATTTCACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR-3UTR CAA 90 bp | CAACTTGGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATGCACCCAAGACCACTCTGCCTCTCAGTaGTTTGTTTGTTTAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLGTWEMISKILLPCTQDHSASQ*FVCLNR Trigger: TCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTG...GTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR TCA 72 bp | AACCAGACCAAACAGCAAACATGGCACAACCATAAGTaGAACATACCTAAATCCTCCTCCAGGAGTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: NQTKQQTWHNHK*NIPKSSSRSVF Trigger: AAATACACTCCTGGAGGAGGATTTAGGTATGTTTCACTTATGGTTGTGCCATGTTTGCTGTTTGGTCTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| 3UTR TCA 72 bp | CCATCTGTGGGCTTCATATCCATGAATTCAACCAAATaGGGGTTGAAACTATTTGTGAAGATCAGAAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSVGFISMNSTK*GLKLFVKIRSP Trigger: AGGGCTTCTGATCTTCACAAATAGTTTCAACCCTCATTTGGTTGAATTCATGGATATGAAGCCCACAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR TCA 72 bp | CTCAACAATGCTTGGAGAAGACGCTACTTAGTCTATTaGCCAAGCTATATAAATTGGTGTTTTGGGAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: LNNAWRRRYLVY*PSYINWCFGKQ Trigger: TTGTTTCCCAAAACACCAATTTATATAGCTTGGTCAATAGACTAAGTAGCGTCTTCTCCAAGCATTGTTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | GCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCAGGCGTCCACTTGACGTCCTaGAACCGCGTGCATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSQGCAGEGFGVHIQAGVHLTS*NRVHQG Trigger: CCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGAC...GCCTGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGCCTCACATCAGGCTCTaGAGTGGCAGCGTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPAGSQGCAGEGFGVHIQPHIRL*SGSVQR Trigger: CCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGG...CTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | CCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCATCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PAGSQGCAGEGFGVHIQASAVAA*RGRRPF Trigger: AAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGA...TGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAAGGCTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTGGGAAGGCTGCAGCAGGACTATaGGGAGCCTCACATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVKALGSISRQASFRLGKAAAGL*GASHQA Trigger: AGCCTGATGTGAGGCTCCTCATAGTCCTGCTGCAGC...CTTCCCAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | CATTGGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATGCTGCAGCAGGACTATaGGGAGCCTCACATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HWPRPKTCTSAVLLATHNAAAGL*GASHQA Trigger: AGCCTGATGTGAGGCTCCTCATAGTCCTGCTGCAGC...ATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR GCA 90 bp | CAAACGGGGAAGCAGGGTAAGTCACTGCTAGGCAGTCACAGGAACTGTGCAAGCCGTCCTGAAACCGCGTaGATCAAGGGCGTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTGKQGKSLLGSHRNCASRPETA*IKGVHP Trigger: AGGATGCACGCCCTTGATGCACGCGGTTTCAGGACG...GCTTGCACAGTTCCTGTGACTGCCTAGCAGTGACTTACCCTGCTTCCCCGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGTTGCCAGGCATAAACTaGTGCGACCATACGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EPAGSQGCAGEGFGVHIQLPGIN*CDHTHP Trigger: AGGATGCGTATGGTCGCACCAGTTTATGCCTGGCAA...CTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR CCA 90 bp | CCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCACACTGTCTGTGTTCTTaGCTCCCTGGAGGGTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PAGSQGCAGEGFGVHIQAHCLCS*LPGGFS Trigger: ACTAAACCCTCCAGGGAGCCAAGAACACAGACAGTG...TGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGTCGACTTCTTCAGATaGGTCACCTTTGTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EPAGSQGCAGEGFGVHIQVDFFR*VTFVLI Trigger: GATCAGCACAAAGGTGACTCATCTGAAGAAGTCGAC...CTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | CAAACGGGGAAGCAGGGTAAGTCACTGCTAGGCAGTCACAGGAACTGTGCAAGCTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTGKQGKSLLGSHRNCASFTVST*RPETAC Trigger: GCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAA...GCTTGCACAGTTCCTGTGACTGCCTAGCAGTGACTTACCCTGCTTCCCCGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAAGGCTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTGGGAAGTCACTGAGGCTGGACTaGTGCAGCAGGACTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVKALGSISRQASFRLGKSLRLD*CSRTMR Trigger: CCTCATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGA...CTTCCCAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| 3UTR CAA 72 bp | CTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTaGGGAAGCTGGTCTGTGCTAAGCCGCGGTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LWGPYPGRLHSG*GSWSVLSRGRH Trigger: ATGTCTACCGCGGCTTAGCACAGACCAGCTTCCCAAGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | CCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTTGCTGGACATCTCTGTGTCTTaGTGGTTGATCTCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCVVLAPVTFELLARLLDISVS*WLISLR Trigger: CCTCAGTGAGATCAACCATCAAGACACAGAGATGTC...CAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGATGGCTACCTTCATCTaGTTTTCCCACTGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EPAGSQGCAGEGFGVHIQMATFI*FSHCLC Trigger: ACACAGACAGTGGGAAAAGCAGATGAAGGTAGCCAT...CTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR CCA 90 bp | CCTGCGGGCAGTCAAGGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCACCGTTGGATGTGAGATaGCTACCTTCATCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAGSQGCAGEGFGVHIQAPLDVR*LPSSAF Trigger: AAAAGCAGATGAAGGTAGCCATCTCACATCCAACGG...TGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCCTTGACTGCCCGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| 3UTR CAA 72 bp | GGTTCAACCTCAAACCCAAGCTGCAAACAGGGGCTTTaGGGTGTGGTCATCAGGATGATCAGCGAGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSTSNPSCKQGL*GVVIRMISERP Trigger: AGGCCTCTCGCTGATCATCCTGATGACCACACCCAAAAGCCCCTGTTTGCAGCTTGGGTTTGAGGTTGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | TGTAGACAGTGTGTGACCCCACAAATCAGGGAGAGGTTCAACCTCAAACCCAAGGTCCACTTGACGTCCTaGAACCGCGTGCATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRQCVTPQIRERFNLKPKVHLTS*NRVHQG Trigger: CCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGAC...CTTGGGTTTGAGGTTGAACCTCTCCCTGATTTGTGGGGTCACACACTGTCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR GCA 90 bp | CGTTTCAGTTGGATGCAGACCTGCCGAGACACTGGTTTAAGAGGAAACTGTGACTCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RFSWMQTCRDTGLRGNCDSAVAA*RGRRPF Trigger: AAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGA...GTCACAGTTTCCTCTTAAACCAGTGTCTCGGCAGGTCTGCATCCAACTGAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR CCA 90 bp | CATTGGCCAAGACCTAAAACCTGCACCAGTGCTGTGCTGCTGGCCACCCACAATTTGCCAGGCATAAACTaGTGCGACCATACGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWPRPKTCTSAVLLATHNLPGIN*CDHTHP Trigger: AGGATGCGTATGGTCGCACCAGTTTATGCCTGGCAA...ATTGTGGGTGGCCAGCAGCACAGCACTGGTGCAGGTTTTAGGTCTTGGCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTTCTCCTTGCGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGGAGTCACCTTTGTGCTaGTCAAACACAGAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IAFSLRQFPWSLRAVKAVESPLC*SNTEEV Trigger: CACCTCTTCTGTGTTTGATCAGCACAAAGGTGACTC...CACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACAGTGACCGCCCAGGGTaGTGGGTGGGAGACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNSDRPG*WVGDSG Trigger: CCCAGAGTCTCCCACCCATCACCCTGGGCGGTCACT...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGTTGGATGCAGACCTGCCGAGACACTGGTTTAAGAGGAAACTGTGACATTGGACGTCCTGAAACCGCGTaGATCAAGGGCGTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SWMQTCRDTGLRGNCDIGRPETA*IKGVHP Trigger: AGGATGCACGCCCTTGATGCACGCGGTTTCAGGACG...TCCAATGTCACAGTTTCCTCTTAAACCAGTGTCTCGGCAGGTCTGCATCCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR GCA 90 bp | ATTGCTTTCTCCTTGCGTCAGTTTCCATGGAGCCTGCGGGCAGTCAAGGCTGTGTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAFSLRQFPWSLRAVKAVLSGML*LAPFLS Trigger: GCTCAGAAACGGTGCCAAGCACAACATCCCAGATAA...CACAGCCTTGACTGCCCGCAGGCTCCATGGAAACTGACGCAAGGAGAAAGCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | TGTAGACAGTGTGTGACCCCACAAATCAGGGAGAGGTTCAACCTCAAACCCAAGTCACTGAGGCTGGACTaGTGCAGCAGGACTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CRQCVTPQIRERFNLKPKSLRLD*CSRTMR Trigger: CCTCATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGA...CTTGGGTTTGAGGTTGAACCTCTCCCTGATTTGTGGGGTCACACACTGTCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAAGTGACCGCCCAGGGTaGTGGGTGGGAGACTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVSDRPG*WVGDSG Trigger: CCCAGAGTCTCCCACCCATCACCCTGGGCGGTCACT...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACGAGGCTGTCAGGAAGTaGCCGCCCAGGGTGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNEAVRK*PPRVMG Trigger: ACCCATCACCCTGGGCGGTCACTTCCTGACAGCCTC...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCACACTCCTGTTTCTACAATAGGAAAGCTAATTAGAGGGTCGTTTCAGCCTCACATCAGGCTCTaGAGTGGCAGCGTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGHTPVSTIGKLIRGSFQPHIRL*SGSVQR Trigger: CCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGG...CTGAAACGACCCTCTAATTAGCTTTCCTATTGTAGAAACAGGAGTGTGGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CAA 72 bp | GTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTaGCTGAACTCACATATATCTGCTCAACTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLAPVTFELLAR*LNSHISAQLLA Trigger: TGCTAGCAGTTGAGCAGATATATGTGAGTTCAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | CAACTTGGAACTTGGGAAATGATCTCTAAGATCTTACTGCCATGCACCCAAGACTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QLGTWEMISKILLPCTQDFTVST*RPETAC Trigger: GCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAA...GTCTTGGGTGCATGGCAGTAAGATCTTAGAGATCATTTCCCAAGTTCCAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACCAGAGAGCTCCTGGTaGCCAGGCTGGCCAGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRPESSW*PGWPAN Trigger: GTTCGCTGGCCAGCCTGGTCACCAGGAGCTCTCTGG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNSAVAA*RGRRPF Trigger: AAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGA...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCCTCACATCAGGCTCTaGAGTGGCAGCGTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSPHIRL*SGSVQR Trigger: CCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAGAAGCTGCAGCCCAGTaGAGGGGTGTCCTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVEAAAQ*RGVLSS Trigger: GGATGACAGGACACCCCTGCACTGGGCTGCAGCTTC...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTGACGGGCCCTGCCGATaGCTCAGAATGATGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSDGPCR*LRMMEH Trigger: GTGCTCCATCATTCTGAGCCATCGGCAGGGCCCGTC...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAGTCCACTTGACGTCCTaGAACCGCGTGCATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVVHLTS*NRVHQG Trigger: CCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGAC...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNFTVST*RPETAC Trigger: GCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAA...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAGCTGCAGCAGGACTATaGGGAGCCTCACATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVAAAGL*GASHQA Trigger: AGCCTGATGTGAGGCTCCTCATAGTCCTGCTGCAGC...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTCCAGAGAGCTCCTGGTaGCCAGGCTGGCCAGCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFPESSW*PGWPAN Trigger: GTTCGCTGGCCAGCCTGGTCACCAGGAGCTCTCTGG...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCCGGTTGTGGAAAGCTaGCCAATGGAGTGGCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNPVVES*PMEWRH Trigger: ATGACGCCACTCCATTGGGCAGCTTTCCACAACCGG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTACCTTGTCCACAAGGGTaGGGTCTGCCCCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVPCPQG*GLPPSS Trigger: TGAAGAAGGGGGCAGACCCCACCCTTGTGGACAAGG...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACTGGGTTCTGATTGGTaGGAGCCCCTTGCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLGSDW*EPLAGQ Trigger: CTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACAGCATTTGGGTGTGTTaGGGCCGGTTGTGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNSIWVC*GRLWKA Trigger: AGCTTTCCACAACCGGCCTCAACACACCCAAATGCT...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAGCCCAGATCCAGCAGTaGCTGGACACATTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVAQIQQ*LDTFCL Trigger: AAGGCAGAATGTGTCCAGTCACTGCTGGATCTGGGC...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGAGGCTGTCAGGAAGTaGCCGCCCAGGGTGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFEAVRK*PPRVMG Trigger: ACCCATCACCCTGGGCGGTCACTTCCTGACAGCCTC...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGCCGCGGTAGACATCACAATGGAAATGTGAAACACGTAAATGTGGAAGCTGTGGAAAGCTCTGTGTCTTaGTGGTTGATCTCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGRHHNGNVKHVNVEAVESSVS*WLISLR Trigger: CCTCAGTGAGATCAACCATCAAGACACAGAGCTTTC...CACAGCTTCCACATTTACGTGTTTCACATTTCCATTGTGATGTCTACCGCGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | AGCCGCGGTAGACATCACAATGGAAATGTGAAACACGTAAATGTGGAAGCTGTGATCTCCATTCGATGCTaGCTGATACACCATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRGRHHNGNVKHVNVEAVISIRC*LIHHCQ Trigger: CTGGCAATGGTGTATCAGGCAGCATCGAATGGAGAT...CACAGCTTCCACATTTACGTGTTTCACATTTCCATTGTGATGTCTACCGCGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCCGGTTGTGGAAAGCTaGCCAATGGAGTGGCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSPVVES*PMEWRH Trigger: ATGACGCCACTCCATTGGGCAGCTTTCCACAACCGG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCACAAGGGTGGGGTCTaGCCCCTTCTTCAACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSHKGGV*PLLQQH Trigger: ATGCTGTTGAAGAAGGGGGCAGACCCCACCCTTGTG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGACGGGCCCTGCCGATaGCTCAGAATGATGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRDGPCR*LRMMEH Trigger: GTGCTCCATCATTCTGAGCCATCGGCAGGGCCCGTC...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTCTGGGTTCTGATTGGTaGGAGCCCCTTGCGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFLGSDW*EPLAGQ Trigger: CTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAG...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTATGTCCCCTCTGGCTTaGAATTGCTGGAAGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSMSPLA*NCWKHP Trigger: CGGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACAT...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCGGAGGTCAGAGAGTTaGCATCTCCATTCGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSRRSES*HLHSML Trigger: CAGCATCGAATGGAGATGTCAACTCTCTGACCTCCG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGTCCACTTGACGTCCTaGAACCGCGTGCATCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRVHLTS*NRVHQG Trigger: CCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGAC...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACATCCCCTCTGTGTCTTaGTGGTTGATCTCACTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNIPSVS*WLISLR Trigger: CCTCAGTGAGATCAACCATCAAGACACAGAGGGGAT...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAGGAGACTCTGGGTTCTaGTTGGTGGGAGCCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIGDSGF*LVGAPC Trigger: GCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCC...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGCCGCGGTAGACATCACAATGGAAATGTGAAACACGTAAATGTGGAAGCTGTGGAAACATTCCAGAGGTaGAAGCTCTGTGTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRGRHHNGNVKHVNVEAVETFQR*KLCVLM Trigger: CATCAAGACACAGAGCTTTCACCTCTGGAATGTTTC...CACAGCTTCCACATTTACGTGTTTCACATTTCCATTGTGATGTCTACCGCGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR GCA 90 bp | ACAGGCCACACTCCTGTTTCTACAATAGGAAAGCTAATTAGAGGGTCGTTTCAGTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGHTPVSTIGKLIRGSFQLSGML*LAPFLS Trigger: GCTCAGAAACGGTGCCAAGCACAACATCCCAGATAA...CTGAAACGACCCTCTAATTAGCTTTCCTATTGTAGAAACAGGAGTGTGGCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAATAATGGACGGGCCCTaGCGATGGCTCAGAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVIMDGP*RWLRMM Trigger: CATCATTCTGAGCCATCGGCAGGGCCCGTCCATTAT...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAGAAGCTGCAGCCCAGTaGAGGGGTGTCCTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIEAAAQ*RGVLSS Trigger: GGATGACAGGACACCCCTGCACTGGGCTGCAGCTTC...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCCTCTGGCTTGGAATTaGTGGAAGCACCCGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSPLAWN*WKHPVC Trigger: ACAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACCTTGTCCACAAGGGTaGGGTCTGCCCCCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRPCPQG*GLPPSS Trigger: TGAAGAAGGGGGCAGACCCCACCCTTGTGGACAAGG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCTCTGGACTGCCCAGTaGAGGGCTGTTTTAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNLWTAQ*RAVLKS Trigger: GGATTTTAAAACAGCCCTCCACTGGGCAGTCCAGAG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCGTCCTTCCTTCTTTTaGGGTTGGCTGTTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNRPSFF*GWLFWE Trigger: CTCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCTGGCTTGGAATTGCTaGAAGCACCCGGTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNLAWNC*KHPVCS Trigger: AGAACAAACCGGGTGCTTCCAGCAATTCCAAGCCAG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAGCTGCAGCAGGACTATaGGGAGCCTCACATCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIAAAGL*GASHQA Trigger: AGCCTGATGTGAGGCTCCTCATAGTCCTGCTGCAGC...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTTTTGGGGAGAGATGCTaGAGAGCTTGTCCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSFGERC*RACPDE Trigger: CTCATCAGGACAAGCTCTTCAGCATCTCTCCCCAAA...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTATTTGGGGAGAGATGCTaGAGAGCTTGTCCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVFGERC*RACPDE Trigger: CTCATCAGGACAAGCTCTTCAGCATCTCTCCCCAAA...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATACGTCCTGAAACCGCGTaGATCAAGGGCGTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIRPETA*IKGVHP Trigger: AGGATGCACGCCCTTGATGCACGCGGTTTCAGGACG...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNLSGML*LAPFLS Trigger: GCTCAGAAACGGTGCCAAGCACAACATCCCAGATAA...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATATCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLISAVAA*RGRRPF Trigger: AAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGA...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACACACTCGGGGACCTTTaGCAAATCGTTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNTLGDL*QIVDDV Trigger: GACATCATCAACGATTTGGCAAAGGTCCCCGAGTGT...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTCCACATCCAGAGCCTaGAGGTTACACTCGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNSTSRA*RLHSGT Trigger: GGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATATCCACATCCAGAGCCTaGAGGTTACACTCGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLISTSRA*RLHSGT Trigger: GGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGA...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACAGATCCAGCAGTGACTaGACACATTCTGCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNRSSSD*THSAFP Trigger: TGGAAAGGCAGAATGTGTCCAGTCACTGCTGGATCT...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGCCCAGGGTGATGGGTaGGAGACTCTGGGTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNAQGDG*ETLGSD Trigger: ATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAATGAGGAAGATGTGGTaGCCCAGAGAGCTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRMRKMW*PRELLV Trigger: CACCAGGAGCTCTCTGGGCCACCACATCTTCCTCAT...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAGTCGACTTCTTCAGATaGGTCACCTTTGTGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVVDFFR*VTFVLI Trigger: GATCAGCACAAAGGTGACTCATCTGAAGAAGTCGAC...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022275.14 |
||
| CDS-3UTR TCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNFTVST*RPETAC Trigger: GCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAGCCCAGATCCAGCAGTaGCTGGACACATTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIAQIQQ*LDTFCL Trigger: AAGGCAGAATGTGTCCAGTCACTGCTGGATCTGGGC...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACTGCTCTGGTCTTTCTaGTGGGCTTTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLLWSF*WAFCSS Trigger: AGAGGAGCAGAAAGCCCATCAGAAAGACCAGAGCAG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTAATCTCCATTCGATGCTaGCTGATACACCATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGKSKNIYLLHFHRERAVISIRC*LIHHCQ Trigger: CTGGCAATGGTGTATCAGGCAGCATCGAATGGAGAT...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022275.14 |
||
| CDS-3UTR GCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTCACTGAGGCTGGACTaGTGCAGCAGGACTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFSLRLD*CSRTMR Trigger: CCTCATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTCACTGAGGCTGGACTaGTGCAGCAGGACTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNSLRLD*CSRTMR Trigger: CCTCATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTAGATCCAGCAGTGACTaGACACATTCTGCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSRSSSD*THSAFP Trigger: TGGAAAGGCAGAATGTGTCCAGTCACTGCTGGATCT...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTGGGGTTGGCTGTTTTaGGAGGGAAGAGGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNWGWLF*EGRGLA Trigger: TGCTAGGCCTCTTCCCTCCCAAAACAGCCAACCCCA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTGGGGTTGGCTGTTTTaGGAGGGAAGAGGCCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFWGWLF*EGRGLA Trigger: TGCTAGGCCTCTTCCCTCCCAAAACAGCCAACCCCA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATATGAGGAAGATGTGGTaGCCCAGAGAGCTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNMRKMW*PRELLV Trigger: CACCAGGAGCTCTCTGGGCCACCACATCTTCCTCAT...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCCAGATAGAAATTTTTaGTCTGGCAGAGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNPDRNF*SGRGAR Trigger: CCTTGCACCTCTGCCAGACCAAAAATTTCTATCTGG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAATGTCCCCTCTGGCTTaGAATTGCTGGAAGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIMSPLA*NCWKHP Trigger: CGGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACAT...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| 3UTR CAA 72 bp | CAAAGGCATGCACCACTCTGCCTCTCAGTTGTTTGTTaGTTTAAACAGAGATCACTTTGCCTGAAGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QRHAPLCLSVVC*FKQRSLCLKKN Trigger: GTTCTTCTTCAGGCAAAGTGATCTCTGTTTAAACAAACAAACAACTGAGAGGCAGAGTGGTGCATGCCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CAA 72 bp | GTGTGGATAAACCAAGCTAAATTTGAAAGACAAATGTaGTGTGGCCATCCTAACTGCCAAGGTACCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VWINQAKFERQM*CGHPNCQGTSL Trigger: CAGTGAGGTACCTTGGCAGTTAGGATGGCCACACAACATTTGTCTTTCAAATTTAGCTTGGTTTATCCACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CAA 72 bp | ATTAAACGGTGCCGTCTAACAACTGTTACACATCCCTaGCAGTGCCTCAGAAATTTATTGCCATCACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IKRCRLTTVTHP*QCLRNLLPSLL Trigger: CAAGAGTGATGGCAATAAATTTCTGAGGCACTGCAAGGGATGTGTAACAGTTGTTAGACGGCACCGTTTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATAAGCATTTGGGTGTGTTaGGGCCGGTTGTGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLISIWVC*GRLWKA Trigger: AGCTTTCCACAACCGGCCTCAACACACCCAAATGCT...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATACTGCTCTGGTCTTTCTaGTGGGCTTTCTGCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLILLWSF*WAFCSS Trigger: AGAGGAGCAGAAAGCCCATCAGAAAGACCAGAGCAG...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTCGCTTCGACTTTTCTaGGAACGCTGGGCAGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFSLRLF*ERWAVC Trigger: GCATACTGCCCAGCGTTCTCAGAAAAGTCGAAGCGA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATATTGGTCTGGCAGAGGTaGAAGGCTGTTCCGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLILVWQR*KAVPSE Trigger: TTCACTCGGAACAGCCTTGCACCTCTGCCAGACCAA...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTTGGTCTGGCAGAGGTaGAAGGCTGTTCCGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFLVWQR*KAVPSE Trigger: TTCACTCGGAACAGCCTTGCACCTCTGCCAGACCAA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATACCTCTGGCTTGGAATTaGTGGAAGCACCCGGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLIPLAWN*WKHPVC Trigger: ACAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGG...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGATTGCCAGGCATAAACTaGTGCGACCATACGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLPGIN*CDHTHP Trigger: AGGATGCGTATGGTCGCACCAGTTTATGCCTGGCAA...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACGTCCTTCCTTCTTTTaGGGTTGGCTGTTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRRPSFF*GWLFWE Trigger: CTCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCCAGATAGAAATTTTTaGTCTGGCAGAGGTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IDLVMFARLKILSEYLGSPDRNF*SGRGAR Trigger: CCTTGCACCTCTGCCAGACCAAAAATTTCTATCTGG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAACACTCGGGGACCTTTaGCAAATCGTTGATGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRTLGDL*QIVDDV Trigger: GACATCATCAACGATTTGGCAAAGGTCCCCGAGTGT...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATATTGCCAGGCATAAACTaGTGCGACCATACGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLILPGIN*CDHTHP Trigger: AGGATGCGTATGGTCGCACCAGTTTATGCCTGGCAA...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGCGGCCATTTTTATCTaGGATGTTGTGCTTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNAAIFI*DVVLGT Trigger: GGTGCCAAGCACAACATCCCAGATAAAAATGGCCGC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATACTCTGGACTGCCCAGTaGAGGGCTGTTTTAAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSVFCFSITVCRASQKLILWTAQ*RAVLKS Trigger: GGATTTTAAAACAGCCCTCCACTGGGCAGTCCAGAG...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTCTGGCTTGGAATTGCTaGAAGCACCCGGTTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFLAWNC*KHPVCS Trigger: AGAACAAACCGGGTGCTTCCAGCAATTCCAAGCCAG...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGAGTCACCTTTGTGCTaGTCAAACACAGAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNESPLC*SNTEEV Trigger: CACCTCTTCTGTGTTTGATCAGCACAAAGGTGACTC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022275.14 |
||
| CDS-3UTR TCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGATGGCAAGAGATACTTTaGATTCTCCGAGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRWQEIL*ILRGPL Trigger: AAGAGGACCTCGGAGAATTCAAAGTATCTCTTGCCA...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR GCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFLSGML*LAPFLS Trigger: GCTCAGAAACGGTGCCAAGCACAACATCCCAGATAA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGATTTTAGGTCTGTTTaGGGAGAGATGCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRDFRSV*GEMLKS Trigger: GCTCTTCAGCATCTCTCCCCAAACAGACCTAAAATC...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR TCA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTGGCAAGAGATACTTTaGATTCTCCGAGGTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFWQEIL*ILRGPL Trigger: AAGAGGACCTCGGAGAATTCAAAGTATCTCTTGCCA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CCA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGATTTTAGGTCTGTTTaGGGAGAGATGCTGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RNLELENHEWLVECSLLNDFRSV*GEMLKS Trigger: GCTCTTCAGCATCTCTCCCCAAACAGACCTAAAATC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| 3UTR CAA 72 bp | ACTCAACAATGCTTGGAGAAGACGCTACTTAGTCTATaGACCAAGCTATATAAATTGGTGTTTTGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TQQCLEKTLLSL*TKLYKLVFWET Trigger: TGTTTCCCAAAACACCAATTTATATAGCTTGGTCAATAGACTAAGTAGCGTCTTCTCCAAGCATTGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| 3UTR CAA 72 bp | AAGACGCTACTTAGTCTATTGACCAAGCTATATAAATaGGTGTTTTGGGAAACAAGTAGGCAGTATGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: KTLLSLLTKLYK*VFWETSRQYVL Trigger: TAATACATACTGCCTACTTGTTTCCCAAAACACCAATTTATATAGCTTGGTCAATAGACTAAGTAGCGTCTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS TCA 90 bp | TTCAGGCCAGCATGGGACACGGCTCCCTGGGAGGCTGTCAGGAAGTaGCCGCCCAGGGTGATGGGTGGGAGACTCTGGGTTCTGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FRPAWDTAPWEAVRK*PPRVMGGRLWVLIG Trigger: ACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGCGGTCACTTCCTGACAGCCTCCCAGGGAGCCGTGTCCCATGCTGGCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CCA 90 bp | GAAGTGACCGCCCAGGGTGATGGGTGGGAGACTCTGGGTTCTGATTaGTGGGAGCCCCTTGCGGGCCAGGGATTTCTTTTCTGGCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EVTAQGDGWETLGSD*WEPLAGQGFLFWQE Trigger: CTCTTGCCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGCGGTCACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS TCA 90 bp | ACAAGGGTGGGGTCTGCCCCCTTCTTCAACAGCATTTGGGTGTGTTaGGGCCGGTTGTGGAAAGCTGCCCAATGGAGTGGCGTCATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRVGSAPFFNSIWVC*GRLWKAAQWSGVIP Trigger: GGGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCCCACCCTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CCA 90 bp | GTGACCGCCCAGGGTGATGGGTGGGAGACTCTGGGTTCTGATTGGTaGGAGCCCCTTGCGGGCCAGGGATTTCTTTTCTGGCAAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VTAQGDGWETLGSDW*EPLAGQGFLFWQEI Trigger: TATCTCTTGCCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGCGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS GCA 90 bp | GTGGCAGCGTGCAGAGGTAGGCGGCCATTTTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGCAGACTCACACAGCCTTCAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAACRGRRPFLSGML*LAPFLSRLTQPSSQ Trigger: CTGGCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
||
| CDS GCA 90 bp | AGCAGGACTATGAGGAGCCTCACATCAGGCTCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTTTTATCTGGGATGTTGTGCTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRTMRSLTSGSAVAA*RGRRPFLSGMLCLA Trigger: TGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGGCTCCTCATAGTCCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CCA 90 bp | TATCAGAAGAAGACACGGTCCAAGCCTTGCAGGAGAACACCTGCCTaGTGTCACCCTTCCAAGGATTCTCTAGTGACACCGGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: YQKKTRSKPCRRTPA*CHPSKDSLVTPGSQ Trigger: CTGGCTGCCCGGTGTCACTAGAGAATCCTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCAGEGFGVHIQAGFIQASGMLC*APFLSR Trigger: TCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGA...AGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS TCA 90 bp | GTAGGCGGCCATTTTTATCTGGGATGTTGTGCTTGGCACCGTTTCTaGGCAGACTCACACAGCCTTCAAGCCAGCCCAGGTAGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VGGHFYLGCCAWHRF*ADSHSLQASPGRLP Trigger: TGGCAACCTACCTGGGCTGGCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
||
| CDS TCA 90 bp | TTGTGGAAAGCTGCCCAATGGAGTGGCGTCATCCCCTCTGTGTCTTaGTGGTTGATCTCACTGAGGCTGGACTGCTGCAGCAGGACTATG | + |
|
Preference number: 5 (lower is better) Translates to: LWKAAQWSGVIPSVS*WLISLRLDCCSRTM Trigger: CATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS GCA 90 bp | GGGGACCTTTGCCAAATCGTTGATGATGTCTCCGAAACCGGAAGCTaGAGCGATATGGACGCACGTCTTCCCACTCTCGTCGTCGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GDLCQIVDDVSETGS*SDMDARLPTLVVVV Trigger: AACTACGACGACGAGAGTGGGAAGACGTGCGTCCATATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS GCA 90 bp | CCTGTCATCCACATCCAGAGCCTGCAGGTTACACTCGGGGACCTTTaGCAAATCGTTGATGATGTCTCCGAAACCGGAAGCTGCAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVIHIQSLQVTLGDL*QIVDDVSETGSCSD Trigger: ATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGATGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS CCA 90 bp | CATTTGGGTGTGTTGAGGCCGGTTGTGGAAAGCTGCCCAATGGAGTaGCGTCATCCCCTCTGTGTCTTGATGGTTGATCTCACTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLGVLRPVVESCPME*RHPLCVLMVDLTEA Trigger: AGCCTCAGTGAGATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CCA 90 bp | TTAATGTCCCTTAGGTTGCTGTCCATGCCCAGATCCAGCAGTGACTaGACACATTCTGCCTTTCCAGAAGCTGCAGCCCAGTGCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LMSLRLLSMPRSSSD*THSAFPEAAAQCRG Trigger: ACCCCTGCACTGGGCTGCAGCTTCTGGAAAGGCAGAATGTGTCCAGTCACTGCTGGATCTGGGCATGGACAGCAACCTAAGGGACATTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGTGTGTGGTCCTGGCTCCAGTGACCTTTGAACTTCTGGCGCGGTTGCTGTCCTGTGTGTTAATGTaGGCACCCATCTTTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLCVVLAPVTFELLARLLSCVLM*APIFSS Trigger: GCTGCTAAAGATGGGTGCCAACATTAACACACAGGA...CAGCAACCGCGCCAGAAGTTCAAAGGTCACTGGAGCCAGGACCACACACAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS GCA 90 bp | AACTTATCAGAAGAAGACACGGTCCAAGCCTTGCAGGAGAACACCTaGCTGGTGTCACCCTTCCAAGGATTCTCTAGTGACACCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLSEEDTVQALQENT*LVSPFQGFSSDTGQ Trigger: CTGCCCGGTGTCACTAGAGAATCCTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATAAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCTGGTGAAGGCTTTGGGGTCCATATCCAGGCAGGCTTCATTCAGGCTTCCTGTGTGTTAATGTaGGCACCCATCTTTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCAGEGFGVHIQAGFIQASCVLM*APIFSS Trigger: GCTGCTAAAGATGGGTGCCAACATTAACACACAGGA...AGCCTGAATGAAGCCTGCCTGGATATGGACCCCAAAGCCTTCACCAGCACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS GCA 90 bp | CTTCTTCAACAGCATTTGGGTGTGTTGAGGCCGGTTGTGGAAAGCTaGCCAATGGAGTGGCGTCATCCCCTCTGTGTCTTGATGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLQQHLGVLRPVVES*PMEWRHPLCVLMVD Trigger: ATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS GCA 90 bp | CACTTCCTGAGTTGCCATGGATACCTGTCATCCACATCCAGAGCCTaGAGGTTACACTCGGGGACCTTTGCCAAATCGTTGATGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HFLSCHGYLSSTSRA*RLHSGTFAKSLMMS Trigger: AGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGATGACAGGTATCCATGGCAACTCAGGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168684.2 |
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| CDS TCA 90 bp | CGAATGACGGAGGTCAGAGAGTTGACATCTCCATTCGATGCTGCCTaGTACACCATTGCCAGGTCGACTTCTTCAGATGAGTCACCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RMTEVRELTSPFDAA*YTIARSTSSDESPL Trigger: CAAAGGTGACTCATCTGAAGAAGTCGACCTGGCAATGGTGTATCAGGCAGCATCGAATGGAGATGTCAACTCTCTGACCTCCGTCATTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000168684.2 |
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| CDS TCA 90 bp | TTAATGTTGGCACCCATCTTTAGCAGCAATTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGCATCAAGGGCGTGCATCCTTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LMLAPIFSSNFTVST*RPETACIKGVHPSL Trigger: CAGTGAAGGATGCACGCCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAAATTGCTGCTAAAGATGGGTGCCAACATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS TCA 90 bp | GAGCCCCTTGCGGGCCAGGGATTTCTTTTCTGGCAAGAGATACTTTaGATTCTCCGAGGTCCTCTTCTTAAAGACAACCATGTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLAGQGFLFWQEIL*ILRGPLLKDNHVHL Trigger: CAGGTGGACATGGTTGTCTTTAAGAAGAGGACCTCGGAGAATTCAAAGTATCTCTTGCCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS TCA 90 bp | TTAGTTGGACCACGGAAACATTCCAGAGGTGAAAGCTCTGTGTCTTaGTGGTTGATCTCACTGAGGCTGGACTGCTGCAGCAGGACTATG | + |
|
Preference number: 5 (lower is better) Translates to: LVGPRKHSRGESSVS*WLISLRLDCCSRTM Trigger: CATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGCTTTCACCTCTGGAATGTTTCCGTGGTCCAACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS GCA 90 bp | ACAGCCTGTCTAGTAACTTATCAGAAGAAGACACGGTCCAAGCCTTaGAGGAGAACACCTGCCTGGTGTCACCCTTCCAAGGATTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TACLVTYQKKTRSKP*RRTPAWCHPSKDSL Trigger: TAGAGAATCCTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATAAGTTACTAGACAGGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS GCA 90 bp | ACAGGAAGTATGGAACCCGTTGGATGTGAGATGGCTACCTTCATCTaGTTTTCCCACTGTCTGTGTTCTTGGCTCCCTGGAGGGTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGSMEPVGCEMATFI*FSHCLCSWLPGGFS Trigger: ACTAAACCCTCCAGGGAGCCAAGAACACAGACAGTGGGAAAAGCAGATGAAGGTAGCCATCTCACATCCAACGGGTTCCATACTTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACGCCAGCCCAGGTAGGTaGCCAGGCATAAACTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNASPGR*PGINWC Trigger: GCACCAGTTTATGCCTGGCAACCTACCTGGGCTGGC...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS-3UTR CAA 90 bp | ACAGGCCACACTCCTGTTTCTACAATAGGAAAGCTAATTAGAGGGTCGTTTCAGTCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGHTPVSTIGKLIRGSFQSGMLC*APFLSR Trigger: TCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGA...CTGAAACGACCCTCTAATTAGCTTTCCTATTGTAGAAACAGGAGTGTGGCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| CDS-3UTR CAA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCAGCATTTGGGTGTGTaGAGGCCGGTTGTGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNQHLGV*RPVVES Trigger: GCTTTCCACAACCGGCCTCAACACACCCAAATGCTG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS-3UTR CAA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTATTGGTGGGAGCCCCTaGCGGGCCAGGGATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IDLVMFARLKILSEYLGSIGGSP*RARDFF Trigger: AAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAAT...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS-3UTR CAA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTCCCTCTGGCTTGGAATaGCTGGAAGCACCCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: IDLVMFARLKILSEYLGSPSGLE*LEAPGL Trigger: CAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGGG...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS-3UTR CAA 90 bp | CGTTTCAGTTGGATGCAGACCTGCCGAGACACTGGTTTAAGAGGAAACTGTGACAGACATCTCTGTGTCTaGATGGTTGATCTCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFSWMQTCRDTGLRGNCDRHLCV*MVDLTE Trigger: CTCAGTGAGATCAACCATCAAGACACAGAGATGTCT...GTCACAGTTTCCTCTTAAACCAGTGTCTCGGCAGGTCTGCATCCAACTGAAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
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| CDS TCA 90 bp | ATTCGATGCTGCCTGATACACCATTGCCAGGTCGACTTCTTCAGATaGGTCACCTTTGTGCTGATCAAACACAGAAGAGGTGCTGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: IRCCLIHHCQVDFFR*VTFVLIKHRRGAEI Trigger: GATTTCAGCACCTCTTCTGTGTTTGATCAGCACAAAGGTGACTCATCTGAAGAAGTCGACCTGGCAATGGTGTATCAGGCAGCATCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000168684.2 |
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| CDS-3UTR CAA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTACAGCATTTGGGTGTGTaGAGGCCGGTTGTGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGKSKNIYLLHFHRERAVQHLGV*RPVVES Trigger: GCTTTCCACAACCGGCCTCAACACACCCAAATGCTG...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTTCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IDLVMFARLKILSEYLGSSGMLC*APFLSR Trigger: TCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGA...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGCCGCGGTAGACATCACAATGGAAATGTGAAACACGTAAATGTGGAAGCTGTGTTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRGRHHNGNVKHVNVEAVFLSGM*CLAPFL Trigger: CAGAAACGGTGCCAAGCACAACATCCCAGATAAAAA...CACAGCTTCCACATTTACGTGTTTCACATTTCCATTGTGATGTCTACCGCGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACCTTCTTCAACAGCATTaGGGTGTGTTGAGGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNLLQQH*GVLRPV Trigger: AACCGGCCTCAACACACCCAAATGCTGTTGAAGAAG...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGATTGGGGTTGGCTGTTTaGGGAGGGAAGAGGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLGLAV*GGKRPS Trigger: GCTAGGCCTCTTCCCTCCCAAAACAGCCAACCCCAA...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGTCACCAGGCTGACCTaGGCAGTTGGTATCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRVTRLT*AVGIHD Trigger: GTCGTGGATACCAACTGCCAAGGTCAGCCTGGTGAC...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACCCTCTGGCTTGGAATaGCTGGAAGCACCCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRPSGLE*LEAPGL Trigger: CAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGGG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | CCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTCCTGTGTGTTAATGTaGGCACCCATCTTTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPGVYFVSQLQFVGRHRNSCVLM*APIFSS Trigger: GCTGCTAAAGATGGGTGCCAACATTAACACACAGGA...GTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCTGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGTCACCAGGCTGACCTaGGCAGTTGGTATCCACGAC | + |
|
Preference number: 5 (lower is better) Translates to: RNLELENHEWLVECSLLNVTRLT*AVGIHD Trigger: GTCGTGGATACCAACTGCCAAGGTCAGCCTGGTGAC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTATTGGTGGGAGCCCCTaGCGGGCCAGGGATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFIGGSP*RARDFF Trigger: AAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAAT...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATACATGTCCCCTCTGGCTaGGAATTGCTGGAAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RSVFCFSITVCRASQKLIHVPSG*ELLEAP Trigger: GGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACATG...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATCATGTCCCCTCTGGCTaGGAATTGCTGGAAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: RNLELENHEWLVECSLLNHVPSG*ELLEAP Trigger: GGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACATG...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAGTATCCATTCACAGGGGAACAGAGAAATAGACCAAAGTGTTTTCCTAGTGTGTTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EYPFTGEQRNRPKCFPSVFLSGM*CLAPFL Trigger: CAGAAACGGTGCCAAGCACAACATCCCAGATAAAAA...CACACTAGGAAAACACTTTGGTCTATTTCTCTGTTCCCCTGTGAATGGATACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223871.2 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATGTGGCGATGATGTCATaGACTTCCGAGGTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNLELENHEWLVECSLLNVAMMS*TSEVSS Trigger: GGAGGAGACCTCGGAAGTCAATGACATCATCGCCAC...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTGGCGATGATGTCATaGACTTCCGAGGTCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFVAMMS*TSEVSS Trigger: GGAGGAGACCTCGGAAGTCAATGACATCATCGCCAC...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RNLELENHEWLVECSLLNSGMLC*APFLSR Trigger: TCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGACTTCTTCAACAGCATTaGGGTGTGTTGAGGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLLQQH*GVLRPV Trigger: AACCGGCCTCAACACACCCAAATGCTGTTGAAGAAG...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGAGAGCGAGCTGTATTGCAGAAGATTTGGTaGAGCATGCTGAATCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGKSKNIYLLHFHRERAVLQKIW*SMLNRP Trigger: AGGACGATTCAGCATGCTCAACCAAATCTTCTGCAA...TACAGCTCGCTCTCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTCGTCCTTCCTTCTTTaGGGGTTGGCTGTTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFSSFLL*GLAVLG Trigger: TCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACGA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGTATTTTGTTTCTCAATTACAGTTTGTAGGGCGTCACAGAAACTAATATCGTCCTTCCTTCTTTaGGGGTTGGCTGTTTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSVFCFSITVCRASQKLISSFLL*GLAVLG Trigger: TCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACGA...TATTAGTTTCTGTGACGCCCTACAAACTGTAATTGAGAAACAAAATACACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | ATAGACTTGGTGATGTTTGCACGCCTGAAGATTCTAAGTGAGTATTTAGGGAGTGTTTTTGCAGAAGATTaGGTTGAGCATGCTGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: IDLVMFARLKILSEYLGSVFAED*VEHAES Trigger: CGATTCAGCATGCTCAACCAAATCTTCTGCAAAAAC...ACTCCCTAAATACTCACTTAGAATCTTCAGGCGTGCAAACATCACCAAGTCTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTCCTGTGTGTTAATGTaGGCACCCATCTTTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFSCVLM*APIFSS Trigger: GCTGCTAAAGATGGGTGCCAACATTAACACACAGGA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGATTGCAGAAGATTTGGTaGAGCATGCTGAATCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRLQKIW*SMLNRP Trigger: AGGACGATTCAGCATGCTCAACCAAATCTTCTGCAA...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFFLSGM*CLAPFL Trigger: CAGAAACGGTGCCAAGCACAACATCCCAGATAAAAA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGGAACCTTGAATTAGAAAACCATGAATGGCTTGTAGAATGCAGCTTACTAAATTTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNLELENHEWLVECSLLNFLSGM*CLAPFL Trigger: CAGAAACGGTGCCAAGCACAACATCCCAGATAAAAA...ATTTAGTAAGCTGCATTCTACAAGCCATTCATGGTTTTCTAATTCAAGGTTCCT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTGTTTTTGCAGAAGATTaGGTTGAGCATGCTGAATCG | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFVFAED*VEHAES Trigger: CGATTCAGCATGCTCAACCAAATCTTCTGCAAAAAC...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | AGTAATCTCACCCTTGGGAAGTCGAAAAATATATATCTTCTCCATTTCCACAGATCCTCTTTCTTGTTTTaGCAGAAGATTTGGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNLTLGKSKNIYLLHFHRSSFLF*QKIWLS Trigger: GCTCAACCAAATCTTCTGCAAAAACAAGAAAGAGGA...TCTGTGGAAATGGAGAAGATATATATTTTTCGACTTCCCAAGGGTGAGATTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS-3UTR CAA 90 bp | GAAACATACCTAAATCCTCCTCCAGGAGTGTATTTTGTTTCTCAATTACAGTTTTCCTCTTTCTTGTTTTaGCAGAAGATTTGGTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ETYLNPPPGVYFVSQLQFSSFLF*QKIWLS Trigger: GCTCAACCAAATCTTCTGCAAAAACAAGAAAGAGGA...AAACTGTAATTGAGAAACAAAATACACTCCTGGAGGAGGATTTAGGTATGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CCA 72 bp | GGTGGGACTGGAGGAACCCCCGCTCTCTTCAGCTCGTaGTGGGTCATGTCCCCTCTGGCTCTCTCCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GGTGGTPALFSS*WVMSPLALSSW Trigger: CCAGCTGGAGAGAGCCAGAGGGGACATGACCCACCACGAGCTGAAGAGAGCGGGGGTTCCTCCAGTCCCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CCA 72 bp | GCCCAGGGTGATGGGTGGGAGACTCTGGGTTCTGATTaGTGGGAGCCCCTTGCGGGCCAGGGATTTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQGDGWETLGSD*WEPLAGQGFLF Trigger: GAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS TCA 72 bp | TGGTGGGTCATGTCCCCTCTGGCTCTCTCCAGCTGGTaGTGGGTCATGTCCCCTCTGGCTTGGAATTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWVMSPLALSSW*WVMSPLAWNCW Trigger: CCAGCAATTCCAAGCCAGAGGGGACATGACCCATCACCAGCTGGAGAGAGCCAGAGGGGACATGACCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CCA 72 bp | CAGGGTGATGGGTGGGAGACTCTGGGTTCTGATTGGTaGGAGCCCCTTGCGGGCCAGGGATTTCTTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGDGWETLGSDW*EPLAGQGFLFW Trigger: CCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CAA 90 bp | CACAAGGGTGGGGTCTGCCCCCTTCTTCAACAGCATTTGGGTGTGTaGAGGCCGGTTGTGGAAAGCTGCCCAATGGAGTGGCGTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: HKGGVCPLLQQHLGV*RPVVESCPMEWRHP Trigger: GGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCCCACCCTTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS TCA 72 bp | GCTGCCCAATGGAGTGGCGTCATCCCCTCTGTGTCTTaGTGGTTGATCTCACTGAGGCTGGACTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAQWSGVIPSVS*WLISLRLDCCS Trigger: GCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS TCA 72 bp | GGGTCTGCCCCCTTCTTCAACAGCATTTGGGTGTGTTaGGGCCGGTTGTGGAAAGCTGCCCAATGGAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSAPFFNSIWVC*GRLWKAAQWSG Trigger: GCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS CAA 72 bp | GGGGTCTGCCCCCTTCTTCAACAGCATTTGGGTGTGTaGAGGCCGGTTGTGGAAAGCTGCCCAATGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GVCPLLQQHLGV*RPVVESCPMEW Trigger: CCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CAA 72 bp | GCTGAATCGTCCTTCCTTCTTTTGGGGTTGGCTGTTTaGGGAGGGAAGAGGCCTAGCAGGCTCTGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: AESSFLLLGLAV*GGKRPSRLCSA Trigger: GGCCGAGCAGAGCCTGCTAGGCCTCTTCCCTCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACGATTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS CAA 90 bp | GCAGCGTGCAGAGGTAGGCGGCCATTTTTATCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGACTCACACAGCCTTCAAGCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AACRGRRPFLSGMLC*APFLSRLTQPSSQP Trigger: GGGCTGGCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CAA 90 bp | ATCCTTGTCCACAAGGGTGGGGTCTGCCCCCTTCTTCAACAGCATTaGGGTGTGTTGAGGCCGGTTGTGGAAAGCTGCCCAATGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILVHKGGVCPLLQQH*GVLRPVVESCPMEW Trigger: CCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTGTTGAAGAAGGGGGCAGACCCCACCCTTGTGGACAAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS CAA 90 bp | GTTGAGCATGCTGAATCGTCCTTCCTTCTTTTGGGGTTGGCTGTTTaGGGAGGGAAGAGGCCTAGCAGGCTCTGCTCGGCCTTCTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VEHAESSFLLLGLAV*GGKRPSRLCSAFSG Trigger: TCCCGAGAAGGCCGAGCAGAGCCTGCTAGGCCTCTTCCCTCCCAAAACAGCCAACCCCAAAAGAAGGAAGGACGATTCAGCATGCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS GCA 72 bp | CAGCATTTGGGTGTGTTGAGGCCGGTTGTGGAAAGCTaGCCAATGGAGTGGCGTCATCCCCTCTGTGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QHLGVLRPVVES*PMEWRHPLCVL Trigger: CAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACACACCCAAATGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS GCA 72 bp | CAGTGCAGGGGTGTCCTGTCATCCACATCCAGAGCCTaGAGGTTACACTCGGGGACCTTTGCCAAATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QCRGVLSSTSRA*RLHSGTFAKSL Trigger: CAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGATGACAGGACACCCCTGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS CCA 72 bp | TGGCTCTCTCCAGCTGGTGATGGGTCATGTCCCCTCTaGCTTGGAATTGCTGGAAGCACCCGGTTTGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLSPAGDGSCPL*LGIAGSTRFVL Trigger: GAGAACAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACATGACCCATCACCAGCTGGAGAGAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CAA 72 bp | GGTGGGAGACTCTGGGTTCTGATTGGTGGGAGCCCCTaGCGGGCCAGGGATTTCTTTTCTGGCAAGAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: GGRLWVLIGGSP*RARDFFSGKRY Trigger: GTATCTCTTGCCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CAA 90 bp | GCAGTGGCAGCGTGCAGAGGTAGGCGGCCATTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTGAGCAGACTCACACAGCCTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVAACRGRRPFLSGM*CLAPFLSRLTQPSS Trigger: GCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGCCACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CAA 90 bp | TGGCAGTTGGTATCCACGACACTGTCAAAGGTGGCGATGATGTCATaGACTTCCGAGGTCTCCTCCTCCTTAGGTCTGGCCCTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WQLVSTTLSKVAMMS*TSEVSSSLGLALLW Trigger: CCAGAGCAGGGCCAGACCTAAGGAGGAGGAGACCTCGGAAGTCAATGACATCATCGCCACCTTTGACAGTGTCGTGGATACCAACTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS CAA 90 bp | GGCTCTCTCCAGCTGGTGATGGGTCATGTCCCCTCTGGCTTGGAATaGCTGGAAGCACCCGGTTTGTTCTCAGGGGTTCTCCAGATAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSLQLVMGHVPSGLE*LEAPGLFSGVLQIE Trigger: TTCTATCTGGAGAACCCCTGAGAACAAACCGGGTGCTTCCAGCAATTCCAAGCCAGAGGGGACATGACCCATCACCAGCTGGAGAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS GCA 72 bp | ATGAGGAGCCTCACATCAGGCTCTGCAGTGGCAGCGTaGAGAGGTAGGCGGCCATTTTTATCTGGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: MRSLTSGSAVAA*RGRRPFLSGML Trigger: CAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGCTGCCACTGCAGAGCCTGATGTGAGGCTCCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CCA 72 bp | GTGTTGAGGCCGGTTGTGGAAAGCTGCCCAATGGAGTaGCGTCATCCCCTCTGTGTCTTGATGGTTGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLRPVVESCPME*RHPLCVLMVDL Trigger: GAGATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAACCGGCCTCAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
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| CDS CAA 90 bp | GTTGTGGAAAGCTGCCCAATGGAGTGGCGTCATCCCCTCTGTGTCTaGATGGTTGATCTCACTGAGGCTGGACTGCTGCAGCAGGACTAT | + |
|
Preference number: 6 (lower is better) Translates to: VVESCPMEWRHPLCV*MVDLTEAGLLQQDY Trigger: ATAGTCCTGCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGGGGATGACGCCACTCCATTGGGCAGCTTTCCACAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CAA 90 bp | ACATCCAGAGCCTGCAGGTTACACTCGGGGACCTTTGCCAAATCGTaGATGATGTCTCCGAAACCGGAAGCTGCAGCGATATGGACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TSRACRLHSGTFAKS*MMSPKPEAAAIWTH Trigger: GTGCGTCCATATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS GCA 72 bp | TGCCAAATCGTTGATGATGTCTCCGAAACCGGAAGCTaGAGCGATATGGACGCACGTCTTCCCACTCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: CQIVDDVSETGS*SDMDARLPTLV Trigger: GACGAGAGTGGGAAGACGTGCGTCCATATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS GCA 72 bp | CACATCCAGAGCCTGCAGGTTACACTCGGGGACCTTTaGCAAATCGTTGATGATGTCTCCGAAACCGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIQSLQVTLGDL*QIVDDVSETGS Trigger: GCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CAA 72 bp | GCGTGCAGAGGTAGGCGGCCATTTTTATCTGGGATGTaGTGCTTGGCACCGTTTCTGAGCAGACTCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: ACRGRRPFLSGM*CLAPFLSRLTQ Trigger: CTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCACGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
||
| CDS CAA 72 bp | GCCTGCAGGTTACACTCGGGGACCTTTGCCAAATCGTaGATGATGTCTCCGAAACCGGAAGCTGCAGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: ACRLHSGTFAKS*MMSPKPEAAAI Trigger: TATCGCTGCAGCTTCCGGTTTCGGAGACATCATCAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 ENSMUST00000168684.2 |
||
| CDS CAA 72 bp | GTATCCACGACACTGTCAAAGGTGGCGATGATGTCATaGACTTCCGAGGTCTCCTCCTCCTTAGGTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VSTTLSKVAMMS*TSEVSSSLGLA Trigger: GGCCAGACCTAAGGAGGAGGAGACCTCGGAAGTCAATGACATCATCGCCACCTTTGACAGTGTCGTGGATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CAA 72 bp | AAAGACAACCATGTCCACCTGGTCACCAGGCTGACCTaGGCAGTTGGTATCCACGACACTGTCAAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KDNHVHLVTRLT*AVGIHDTVKGG Trigger: GCCACCTTTGACAGTGTCGTGGATACCAACTGCCAAGGTCAGCCTGGTGACCAGGTGGACATGGTTGTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS CAA 90 bp | AGGGTGATGGGTGGGAGACTCTGGGTTCTGATTGGTGGGAGCCCCTaGCGGGCCAGGGATTTCTTTTCTGGCAAGAGATACTTTGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: RVMGGRLWVLIGGSP*RARDFFSGKRYFEF Trigger: GAATTCAAAGTATCTCTTGCCAGAAAAGAAATCCCTGGCCCGCAAGGGGCTCCCACCAATCAGAACCCAGAGTCTCCCACCCATCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
||
| CDS TCA 72 bp | GCACCCATCTTTAGCAGCAATTTCACTGTGTCCACTTaGCGTCCTGAAACCGCGTGCATCAAGGGCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: APIFSSNFTVST*RPETACIKGVH Trigger: ATGCACGCCCTTGATGCACGCGGTTTCAGGACGTCAAGTGGACACAGTGAAATTGCTGCTAAAGATGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS TCA 72 bp | CCACGGAAACATTCCAGAGGTGAAAGCTCTGTGTCTTaGTGGTTGATCTCACTGAGGCTGGACTGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PRKHSRGESSVS*WLISLRLDCCS Trigger: GCTGCAGCAGTCCAGCCTCAGTGAGATCAACCATCAAGACACAGAGCTTTCACCTCTGGAATGTTTCCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS GCA 72 bp | TGCAGAGGTAGGCGGCCATTTTTATCTGGGATGTTGTaGTTGGCACCGTTTCTGAGCAGACTCACACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: CRGRRPFLSGML*LAPFLSRLTQP Trigger: AGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS GCA 72 bp | AGTTGCCATGGATACCTGTCATCCACATCCAGAGCCTaGAGGTTACACTCGGGGACCTTTGCCAAATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: SCHGYLSSTSRA*RLHSGTFAKSL Trigger: CAACGATTTGGCAAAGGTCCCCGAGTGTAACCTGCAGGCTCTGGATGTGGATGACAGGTATCCATGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168684.2 |
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| CDS CAA 90 bp | CCTCTTCTTAAAGACAACCATGTCCACCTGGTCACCAGGCTGACCTaGGCAGTTGGTATCCACGACACTGTCAAAGGTGGCGATGATGTC | + |
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Preference number: 6 (lower is better) Translates to: PLLKDNHVHLVTRLT*AVGIHDTVKGGDDV Trigger: GACATCATCGCCACCTTTGACAGTGTCGTGGATACCAACTGCCAAGGTCAGCCTGGTGACCAGGTGGACATGGTTGTCTTTAAGAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS TCA 72 bp | CATTTTTATCTGGGATGTTGTGCTTGGCACCGTTTCTaGGCAGACTCACACAGCCTTCAAGCCAGCCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HFYLGCCAWHRF*ADSHSLQASPG Trigger: ACCTGGGCTGGCTTGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS GCA 72 bp | GACGGAGGTCAGAGAGTTGACATCTCCATTCGATGCTaGCTGATACACCATTGCCAGGTCGACTTCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: DGGQRVDISIRC*LIHHCQVDFFR Trigger: TCTGAAGAAGTCGACCTGGCAATGGTGTATCAGGCAGCATCGAATGGAGATGTCAACTCTCTGACCTCCGTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000168684.2 |
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| CDS GCA 72 bp | CTAGTAACTTATCAGAAGAAGACACGGTCCAAGCCTTaGAGGAGAACACCTGCCTGGTGTCACCCTTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LVTYQKKTRSKP*RRTPAWCHPSK Trigger: CTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATAAGTTACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS GCA 72 bp | ATGGAACCCGTTGGATGTGAGATGGCTACCTTCATCTaGTTTTCCCACTGTCTGTGTTCTTGGCTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: MEPVGCEMATFI*FSHCLCSWLPG Trigger: TCCAGGGAGCCAAGAACACAGACAGTGGGAAAAGCAGATGAAGGTAGCCATCTCACATCCAACGGGTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS CCA 72 bp | GCTACCTTCATCTGCTTTTCCCACTGTCTGTGTTCTTaGCTCCCTGGAGGGTTTAGTTGGACCACGGAAACA | + |
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Preference number: 6 (lower is better) Translates to: ATFICFSHCLCS*LPGGFSWTTET Trigger: TGTTTCCGTGGTCCAACTAAACCCTCCAGGGAGCCAAGAACACAGACAGTGGGAAAAGCAGATGAAGGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS CAA 72 bp | AGAGGTAGGCGGCCATTTTTATCTGGGATGTTGTGCTaGGCACCGTTTCTGAGCAGACTCACACAGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RGRRPFLSGMLC*APFLSRLTQPS Trigger: TGAAGGCTGTGTGAGTCTGCTCAGAAACGGTGCCAAGCACAACATCCCAGATAAAAATGGCCGCCTACCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CAA 90 bp | AACAGCCTGTCTAGTAACTTATCAGAAGAAGACACGGTCCAAGCCTaGCAGGAGAACACCTGCCTGGTGTCACCCTTCCAAGGATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSLSSNLSEEDTVQA*QENTCLVSPFQGFS Trigger: AGAGAATCCTTGGAAGGGTGACACCAGGCAGGTGTTCTCCTGCAAGGCTTGGACCGTGTCTTCTTCTGATAAGTTACTAGACAGGCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022275.14 ENSMUST00000165593.9 |
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| CDS TCA 72 bp | GAGGTCAGAGAGTTGACATCTCCATTCGATGCTGCCTaGTACACCATTGCCAGGTCGACTTCTTCAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: EVRELTSPFDAA*YTIARSTSSDE Trigger: CTCATCTGAAGAAGTCGACCTGGCAATGGTGTATCAGGCAGCATCGAATGGAGATGTCAACTCTCTGACCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000168684.2 |
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| CDS TCA 72 bp | TCTCTGGGACACAGGAAGTATGGAACCCGTTGGATGTaGGATGGCTACCTTCATCTGCTTTTCCCACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SLGHRKYGTRWM*DGYLHLLFPLS Trigger: AGACAGTGGGAAAAGCAGATGAAGGTAGCCATCTCACATCCAACGGGTTCCATACTTCCTGTGTCCCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS CCA 72 bp | GGGACACAGGAAGTATGGAACCCGTTGGATGTGAGATaGCTACCTTCATCTGCTTTTCCCACTGTCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: GTQEVWNPLDVR*LPSSAFPTVCV Trigger: AACACAGACAGTGGGAAAAGCAGATGAAGGTAGCCATCTCACATCCAACGGGTTCCATACTTCCTGTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS TCA 72 bp | GGAGGGTTTAGTTGGACCACGGAAACATTCCAGAGGTaGAAGCTCTGTGTCTTGATGGTTGATCTCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: GGFSWTTETFQR*KLCVLMVDLTE Trigger: CTCAGTGAGATCAACCATCAAGACACAGAGCTTTCACCTCTGGAATGTTTCCGTGGTCCAACTAAACCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS CAA 72 bp | TTAAGGATCTCTGGGACACAGGAAGTATGGAACCCGTaGGATGTGAGATGGCTACCTTCATCTGCTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LRISGTQEVWNP*DVRWLPSSAFP Trigger: GGGAAAAGCAGATGAAGGTAGCCATCTCACATCCAACGGGTTCCATACTTCCTGTGTCCCAGAGATCCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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| CDS TCA 72 bp | TGCCTGATACACCATTGCCAGGTCGACTTCTTCAGATaGGTCACCTTTGTGCTGATCAAACACAGAAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CLIHHCQVDFFR*VTFVLIKHRRG Trigger: ACCTCTTCTGTGTTTGATCAGCACAAAGGTGACTCATCTGAAGAAGTCGACCTGGCAATGGTGTATCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000168684.2 |
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| CDS CAA 72 bp | AAACTGGTGCGACCATACGCATCCTGTGTGTTAATGTaGGCACCCATCTTTAGCAGCAATTTCACTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: KLVRPYASCVLM*APIFSSNFTVS Trigger: GGACACAGTGAAATTGCTGCTAAAGATGGGTGCCAACATTAACACACAGGATGCGTATGGTCGCACCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022275.14 ENSMUST00000056047.14 ENSMUST00000165593.9 ENSMUST00000168684.2 ENSMUST00000223871.2 |
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| CDS CCA 72 bp | TCTAGACTTAGTGAGTTCCAGTTTATTAAGGATCTCTaGGACACAGGAAGTATGGAACCCGTTGGATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SRLSEFQFIKDL*DTGSMEPVGCE Trigger: CTCACATCCAACGGGTTCCATACTTCCTGTGTCCCAGAGATCCTTAATAAACTGGAACTCACTAAGTCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056047.14 |
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