Pregenerated sensors for ANKRD54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033055Ensembl transcript IDs: ENSMUST00000040676.11, ENSMUST00000125523.2, ENSMUST00000151889.8, ENSMUST00000153003.3, ENSMUST00000156411.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCTCGGCATCTAAGGGCAAGGGCAAGGTGAACTCCAGAGTTCCCTaGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCA | + |
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Preference number: 1 (lower is better) Translates to: PSASKGKGKVNSRVP*AFPVASSEGRRAAA Trigger: TGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCTTAGATGCCGAGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CCA 90 bp | AGGGCTCTGAGGTGTGCTGTGGGCACAGGGAGGCCACGGGAGGAGTaGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: RALRCAVGTGRPREE*CLLQQHVWAWNVAT Trigger: TGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGGCCTCCCTGTGCCCACAGCACACCTCAGAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR CCA 90 bp | AGGCCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTaGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: RPREEWCLLQQHVWA*NVATEAGIMQQEQG Trigger: CCCCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR CCA 90 bp | ACAGGGAGGCCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTaGGCCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TGRPREEWCLLQQHV*AWNVATEAGIMQQE Trigger: CTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGGCCTCCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR CCA 90 bp | GTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTaGGAAGAACTAGAGGGCTCTGAGGTGTGCTGTGGGCACAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: VASECQPDDRNRAHG*EELEGSEVCCGHRE Trigger: CTCCCTGTGCCCACAGCACACCTCAGAGCCCTCTAGTTCTTCCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR CCA 90 bp | TGTGGTGATGACAGGAACATGGTTGGTGCAGGCCGCCAGGTGCAATaGCGTGTTGCCCAGACCATCCTGTTGGTTGGGGTCAGCCCCATG | + |
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Preference number: 1 (lower is better) Translates to: CGDDRNMVGAGRQVQ*RVAQTILLVGVSPM Trigger: CATGGGGCTGACCCCAACCAACAGGATGGTCTGGGCAACACGCCATTGCACCTGGCGGCCTGCACCAACCATGTTCCTGTCATCACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR GCA 90 bp | GTCCTTCCTAATCTTGAGCAATGTCCCTCTTCTGCTCAGAGACAGTaGAGTGTTTCCTTGGAAGGAAGGAGCAGGGCTACACTGAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: VLPNLEQCPSSAQRQ*SVSLEGRSRATLKC Trigger: GCACTTCAGTGTAGCCCTGCTCCTTCCTTCCAAGGAAACACTGCACTGTCTCTGAGCAGAAGAGGGACATTGCTCAAGATTAGGAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTGCTACCCGTTCTCGCTGCTCATaGCGCCCCAGGCGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SSEGRRAAAKQGAASLATRSRCS*RPRRSR Trigger: CCTGGAGCGCCTGGGGCGGCATGAGCAGCGAGAACG...GGTAGCAAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCCCCGACCCAGAGAGATaGCGCAGACTGTCAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QSSLGFPGSELRGQEGGGPDPER*RRLSVL Trigger: CAGAACTGACAGTCTGCGTCATCTCTCTGGGTCGGG...GCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCGAGGGCTCTGAGGTGTaGTGTGGGCACAGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: AARVASECQPDDRNRAHGEGSEV*CGHREA Trigger: GGCCTCCCTGTGCCCACAGCACACCTCAGAGCCCTC...GCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCCAGGAACAGAGCCCATaGCTGGGAAGAACTAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QSSLGFPGSELRGQEGGGQEQSP*LGRTRG Trigger: CCCTCTAGTTCTTCCCAGCCATGGGCTCTGTTCCTG...GCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCAGGGCAAGGGCAAGGTaGACTCCAGAGTTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: AARVASECQPDDRNRAHGRARAR*TPEFPG Trigger: CCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCT...GCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGCAGGAGCAGGGGCTGTaGTCCCGACCCAGAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RPREEWCLLQQHVWAWNVQEQGL*SRPREM Trigger: CATCTCTCTGGGTCGGGACCACAGCCCCTGCTCCTG...CACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCCTGCAGAGCTTTCTTTaGGCTAAACCAGGTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QSSLGFPGSELRGQEGGGLQSFL*AKPGPS Trigger: GGAAGGACCTGGTTTAGCCCAAAGAAAGCTCTGCAG...GCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGGCTGGGCTCTGGTGTATCTGTCAGCAGAGCCAGTCCCTGCTGGAGGTTCCAGGGCAAGGGCAAGGTaGACTCCAGAGTTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SGWALVYLSAEPVPAGGSRARAR*TPEFPG Trigger: CCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCT...GGAACCTCCAGCAGGGACTGGCTCTGCTGACAGATACACCAGAGCCCAGCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR-3UTR TCA 90 bp | CACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTAAGGGCAAGGGCAAGGTaGACTCCAGAGTTCCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HGRSGVCYNSTCGPGMWLRARAR*TPEFPG Trigger: CCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCT...TAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGCCAGCTCTGTCTAGGGCATCTACACGGGCCCCTCCTCGAAGCAGTGTGTGGTCCAGGAGCAGCTaGACAATCTGGTCATTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VRPALSRASTRAPPRSSVWSRSS*TIWSLP Trigger: TGGCAATGACCAGATTGTGCAGCTGCTCCTGGACCA...CACACTGCTTCGAGGAGGGGCCCGTGTAGATGCCCTAGACAGAGCTGGCCGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR CCA 90 bp | GAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCTGTGGGCCTGGAATGTaGCTACAGAGGCTGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: ELQSSLGFPGSELRGQEGCGPGM*LQRLAL Trigger: TAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACA...GCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR-3UTR CCA 90 bp | GGCGGACGGCCTCCAGACACTGGGAATGACCCTCCTGTAGGATGTTCAGCTTCGGACCATCCTGTTGGTTaGGGTCAGCCCCATGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GGRPPDTGNDPPVGCSASDHPVG*GQPHGP Trigger: TGGACCATGGGGCTGACCCCAACCAACAGGATGGTC...CGAAGCTGAACATCCTACAGGAGGGTCATTCCCAGTGTCTGGAGGCCGTCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAGCCCGACCCAGAGAGATaGCGCAGACTGTCAGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: QHVWAWNVATEAGIMQQEPDPER*RRLSVL Trigger: CAGAACTGACAGTCTGCGTCATCTCTCTGGGTCGGG...CTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCCTCTTCTCCATACTCTaGATCTGCAGACTGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ELQSSLGFPGSELRGQEGLFSIL*ICRLRE Trigger: CTCCCTCAGTCTGCAGATGCAGAGTATGGAGAAGAG...GCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153003.3 ENSMUST00000156411.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTGCTACCTTGCAGGAAGCAAAATaGAGGGCAGTTCTGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSEGRRAAAKQGAASLATLQEAK*RAVLPL Trigger: TAAAGGCAGAACTGCCCTCCATTTTGCTTCCTGCAA...GGTAGCAAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR GCA 90 bp | TTGTGGAGGCCAGAAATAAAAACATGTCTGGCTGGGCTCTGGTGTATCTGTCAGGTGCCAGTCACCTCCTaGCTCCTCCTCCAGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: LWRPEIKTCLAGLWCICQVPVTS*LLLQGS Trigger: GGAGCCCTGGAGGAGGAGGCAGGAGGTGACTGGCAC...CTGACAGATACACCAGAGCCCAGCCAGACATGTTTTTATTTCTGGCCTCCACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR-3UTR GCA 90 bp | AGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTGCTACCTCTTCTCGCACAATCTGGTCATTaGCATTGCAGGAAGCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: RAGGRRQSKEQPPLLPLLAQSGH*HCRKQN Trigger: ATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGC...GAGAAGAGGTAGCAAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTCTACAACAGCACGTGTaGGCCTGGAATGTGGCTACA | + |
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Preference number: 2 (lower is better) Translates to: CLLQQHVWAWNVATEAGILQQHV*AWNVAT Trigger: TGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAG...AATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CAA 90 bp | CTTGAGCAATGTCCCTCTTCTGCTCAGAGACAGTGCAGTGTTTCCTaGGAAGGAAGGAGCAGGGCTACACTGAAGTGCTGGTGTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LEQCPSSAQRQCSVS*EGRSRATLKCWCKG Trigger: CCCCTTACACCAGCACTTCAGTGTAGCCCTGCTCCTTCCTTCCAAGGAAACACTGCACTGTCTCTGAGCAGAAGAGGGACATTGCTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR-3UTR CCA 90 bp | TTGGAAGGAAGGAGCAGGGCTACACTGAAGTGCTGGTGTAAGGGGCAGGACAAGAGTGCAGTGTTTCCTTaGAAGGAAGGAGCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LEGRSRATLKCWCKGQDKSAVFP*KEGAGL Trigger: TAGCCCTGCTCCTTCCTTCCAAGGAAACACTGCACT...CTTGTCCTGCCCCTTACACCAGCACTTCAGTGTAGCCCTGCTCCTTCCTTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCATGACAGGAACATGGTaGGTGCAGGCCGCCAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: QSSLGFPGSELRGQEGGGMTGTW*VQAARC Trigger: GCACCTGGCGGCCTGCACCAACCATGTTCCTGTCAT...GCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR GCA 72 bp | TGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTATaGAGCAGGAGCAGGGGCTGTGGTCCCGACCCAGAG | + |
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Preference number: 3 (lower is better) Translates to: CGPGMWLQRLAL*SRSRGCGPDPE Trigger: CTCTGGGTCGGGACCACAGCCCCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | ACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTaGCATTATGCAGCAGGAGCAGGGGCTGTGGTCCCG | + |
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Preference number: 3 (lower is better) Translates to: TARVGLECGYRG*HYAAGAGAVVP Trigger: CGGGACCACAGCCCCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR TCA 72 bp | AGCAGGAGCAGGGGCTGTGGTCCCGACCCAGAGAGATaGCGCAGACTGTCAGTTCTGCCCTCGGCATCTAAG | + |
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Preference number: 3 (lower is better) Translates to: SRSRGCGPDPER*RRLSVLPSASK Trigger: CTTAGATGCCGAGGGCAGAACTGACAGTCTGCGTCATCTCTCTGGGTCGGGACCACAGCCCCTGCTCCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | TCTAAGGGCAAGGGCAAGGTGAACTCCAGAGTTCCCTaGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SKGKGKVNSRVP*AFPVASSEGRR Trigger: CCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCTTAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | GACAGGAACATGGTTGGTGCAGGCCGCCAGGTGCAATaGCGTGTTGCCCAGACCATCCTGTTGGTTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: DRNMVGAGRQVQ*RVAQTILLVGV Trigger: GACCCCAACCAACAGGATGGTCTGGGCAACACGCCATTGCACCTGGCGGCCTGCACCAACCATGTTCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR-3UTR CAA 90 bp | GAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCAAGGAGCAGCCTCCCTaGCTACCTCTTCTCCATACT | + |
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Preference number: 3 (lower is better) Translates to: ELQSSLGFPGSELRGQEGKEQPP*LPLLHT Trigger: AGTATGGAGAAGAGGTAGCAAGGGAGGCTGCTCCTT...GCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153003.3 ENSMUST00000156411.2 |
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| 3UTR GCA 72 bp | CTGCTGGAGGTTCCGAGGGACCCACTGCCTGTCCTCTaGCGGCTCCCAGCTTCTTTCTCAACATCTCACATC | + |
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Preference number: 3 (lower is better) Translates to: LLEVPRDPLPVL*RLPASFSTSHI Trigger: GATGTGAGATGTTGAGAAAGAAGCTGGGAGCCGGCAGAGGACAGGCAGTGGGTCCCTCGGAACCTCCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR GCA 72 bp | CAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTaGTACCTCTTCTCCATACTCTGCATCTGCAGACTG | + |
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Preference number: 3 (lower is better) Translates to: QEGGGKARSSLP*YLFSILCICRL Trigger: CAGTCTGCAGATGCAGAGTATGGAGAAGAGGTAGCAAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153003.3 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | GGGCAGGACAAGCTTAGAGACCCAAAGCAGCCCGGGTaGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAG | + |
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Preference number: 3 (lower is better) Translates to: GQDKLRDPKQPG*PQSVSQMTGTE Trigger: CTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGCTTTGGGTCTCTAAGCTTGTCCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR TCA 72 bp | CAAAGCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATaGCAGGAACAGAGCCCATGGCTGGGAAGAACTAGA | + |
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Preference number: 3 (lower is better) Translates to: QSSPGGLRVSAR*QEQSPWLGRTR Trigger: TCTAGTTCTTCCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR GCA 72 bp | GTGATGACAGGAACATGGTTGGTGCAGGCCGCCAGGTaGAATGGCGTGTTGCCCAGACCATCCTGTTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: VMTGTWLVQAAR*NGVLPRPSCWL Trigger: CAACCAACAGGATGGTCTGGGCAACACGCCATTGCACCTGGCGGCCTGCACCAACCATGTTCCTGTCATCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR CCA 72 bp | CCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTaGGCCTGGAATGTGGCTACAGAGGCTGGCATTATG | + |
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Preference number: 3 (lower is better) Translates to: PREEWCLLQQHV*AWNVATEAGIM Trigger: CATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | GAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTaGGAAGAACTAGAGGGCTCTGAGGTGTGCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: ECQPDDRNRAHG*EELEGSEVCCG Trigger: CCCACAGCACACCTCAGAGCCCTCTAGTTCTTCCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| 3UTR CCA 72 bp | GAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTaGAATGTGGCTACAGAGGCTGGCATTATGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: EEWCLLQQHVWA*NVATEAGIMQQ Trigger: CTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
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| 3UTR TCA 72 bp | GGGCTGCAAAACGGACGCCCATTCGTAGTGTTTCAGTaGTTGCGGGGGAAGGAGCTGCAGAGCTTTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GLQNGRPFVVFQ*LRGKELQSFLW Trigger: CCAAAGAAAGCTCTGCAGCTCCTTCCCCCGCAATCACTGAAACACTACGAATGGGCGTCCGTTTTGCAGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR GCA 72 bp | CCCCATGGTCCAGGAGCAGCTGCACAATCTGGTCATTaGCATTGCAGGAAGCAAAATGGAGGGCAGTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PHGPGAAAQSGH*HCRKQNGGQFC Trigger: GCAGAACTGCCCTCCATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGCAGCTGCTCCTGGACCATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
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| 3UTR CCA 72 bp | TGGAGGCCAGAAATAAAAACATGTCTGGCTGGGCTCTaGTGTATCTGTCAGCAGAGCCAGTCCCTGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: WRPEIKTCLAGL*CICQQSQSLLE Trigger: CTCCAGCAGGGACTGGCTCTGCTGACAGATACACCAGAGCCCAGCCAGACATGTTTTTATTTCTGGCCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| 3UTR GCA 72 bp | AATCTTGAGCAATGTCCCTCTTCTGCTCAGAGACAGTaGAGTGTTTCCTTGGAAGGAAGGAGCAGGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: NLEQCPSSAQRQ*SVSLEGRSRAT Trigger: TGTAGCCCTGCTCCTTCCTTCCAAGGAAACACTGCACTGTCTCTGAGCAGAAGAGGGACATTGCTCAAGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| 3UTR CCA 72 bp | ACAATTGTGGAGGCCAGAAATAAAAACATGTCTGGCTaGGCTCTGGTGTATCTGTCAGCAGAGCCAGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TIVEARNKNMSG*ALVYLSAEPVP Trigger: AGGGACTGGCTCTGCTGACAGATACACCAGAGCCCAGCCAGACATGTTTTTATTTCTGGCCTCCACAATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | GTGCGGCCAGCTCTGTCTAGGGCATCTACACGGGCCCCTCCTCGAAGCAGTGTGGTACCTCCTTGCCGGTaGGCCCGAGCCGACGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRPALSRASTRAPPRSSVVPPCR*ARADGG Trigger: CCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTAC...CACACTGCTTCGAGGAGGGGCCCGTGTAGATGCCCTAGACAGAGCTGGCCGCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
||
| CDS-3UTR GCA 90 bp | GGCAAGGTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCCGTTCTCGCTGCTCATaGCGCCCCAGGCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVNSRVPWAFPVASSEGRSRCS*RPRRSR Trigger: CCTGGAGCGCCTGGGGCGGCATGAGCAGCGAGAACG...GCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTCCCAGACCATCCTGTTaGTTGGGGTCAGCCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSELRGQEGGGKARSSLPPRPSC*LGSAPW Trigger: CCATGGGGCTGACCCCAACCAACAGGATGGTCTGGG...AGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCCGCGTAGCATGTGGATaGTCTGCTTCACCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPVASSEGRRAAAKQGAARVACG*SASPPG Trigger: GCCTGGAGGTGAAGCAGATCATCCACATGCTACGCG...GGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR GCA 90 bp | CCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTCGTTCTCGCTGCTCATaGCGCCCCAGGCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PREEWCLLQQHVWAWNVARSRCS*RPRRSR Trigger: CCTGGAGCGCCTGGGGCGGCATGAGCAGCGAGAACG...AGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | TCTAAGGGCAAGGGCAAGGTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGGTACCTCCTTGCCGGTaGGCCCGAGCCGACGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKGKGKVNSRVPWAFPVAVPPCR*ARADGG Trigger: CCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTAC...CGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCCCTTAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | TTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCCTACGTCGTTGGCATTaGCAGAGTCCCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPVASSEGRRAAAKQGAALRRWH*QSPSAS Trigger: AGAGGCTGAGGGACTCTGCCAATGCCAACGACGTAG...GGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000153003.3 |
||
| 3UTR CAA 72 bp | ACATGGTTGGTGCAGGCCGCCAGGTGCAATGGCGTGTaGCCCAGACCATCCTGTTGGTTGGGGTCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWLVQAARCNGV*PRPSCWLGSAP Trigger: TGGGGCTGACCCCAACCAACAGGATGGTCTGGGCAACACGCCATTGCACCTGGCGGCCTGCACCAACCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
||
| CDS-3UTR GCA 90 bp | TGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTCGTTCTCGCTGCTCATaGCGCCCCAGGCGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLLQQHVWAWNVATEAGIRSRCS*RPRRSR Trigger: CCTGGAGCGCCTGGGGCGGCATGAGCAGCGAGAACG...AATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 ENSMUST00000156411.2 |
||
| CDS-3UTR GCA 90 bp | GGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTCTCTTCTCCATACTCTaGATCTGCAGACTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSELRGQEGGGKARSSLPLFSIL*ICRLRE Trigger: CTCCCTCAGTCTGCAGATGCAGAGTATGGAGAAGAG...AGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAACCATCTTCCAGCAGCTaGTGTTTCTACGTCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLGFPGSELRGQEGGGKPSSSS*CFYVVG Trigger: GCCAACGACGTAGAAACAGCAGCTGCTGGAAGATGG...TTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTGTTCAGCTTCGACTTaGCCAGGTGTAGGGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AARVASECQPDDRNRAHGCSAST*PGVGVC Trigger: GCACACCCCTACACCTGGCCAAGTCGAAGCTGAACA...GCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCATCTTCCAGCAGCTGCTaGACTGTTTCTACGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AFPVASSEGRRAAAKQGASSSSC*TVSTSL Trigger: CAACGACGTAGAAACAGTGCAGCAGCTGCTGGAAGA...TGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | GCCACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCCTACGTCGTTGGCATTaGCAGAGTCCCTCAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATGGVVSATTARVGLECGLRRWH*QSPSAS Trigger: AGAGGCTGAGGGACTCTGCCAATGCCAACGACGTAG...GCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAGCAGGGGCTGTGACCATCCTGTTGGTTaGGGTCAGCCCCATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGMWLQRLALCSRSRGCDHPVG*GQPHGP Trigger: TGGACCATGGGGCTGACCCCAACCAACAGGATGGTC...ACAGCCCCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGAGCAGGGGCTGTGGTCCCGACCCAGAGAGATGACGCAGACTGTCAGTAGCATGTGGATGATCTaGAAGGAGGTAGGGGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QQEQGLWSRPREMTQTVSSMWMI*KEVGAA Trigger: TGCGGCCCCTACCTCCTTCCAGATCATCCACATGCT...ACTGACAGTCTGCGTCATCTCTCTGGGTCGGGACCACAGCCCCTGCTCCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125523.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTACTGCCCCTGTTCTTTaGTACTTGTCATCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VASSEGRRAAAKQGAASLTAPVL*YLSSGG Trigger: GCCTCCAGATGACAAGTACCAAAGAACAGGGGCAGT...AAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156411.2 |
||
| 3UTR CAA 72 bp | GCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTaGCTACCTCTTCTCCATACTCTGCATCTGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGGRRQSKEQPP*LPLLHTLHLQT Trigger: AGTCTGCAGATGCAGAGTATGGAGAAGAGGTAGCAAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153003.3 ENSMUST00000156411.2 |
||
| CDS-3UTR TCA 90 bp | CACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACGCGTAGCATGTGGATaGTCTGCTTCACCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGRSGVCYNSTCGPGMWLRVACG*SASPPG Trigger: GCCTGGAGGTGAAGCAGATCATCCACATGCTACGCG...TAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAGCAGGGGCTGTGGTAGCATGTGGATGATCTaGTTCACCTCCAGGCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PGMWLQRLALCSRSRGCGSMWMI*FTSRRT Trigger: CGTCCGCCTGGAGGTGAAGCAGATCATCCACATGCT...ACCACAGCCCCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | CCCGGGTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTGGGTTGCAGGAAGCAAAATaGAGGGCAGTTCTGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PGWPQSVSQMTGTEPMAGLQEAK*RAVLPL Trigger: TAAAGGCAGAACTGCCCTCCATTTTGCTTCCTGCAA...CCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | CTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGGTGATGACAGGAACATaGTTGGTGCAGGCCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQHVWAWNVATEAGIMQVMTGT*LVQAAR Trigger: CCTGGCGGCCTGCACCAACCATGTTCCTGTCATCAC...CTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | GGCAAGGGCAAGGTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCATACTCGCGTAGCATGTaGATGATCTGCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGKVNSRVPWAFPVASSYSRSM*MICFTS Trigger: GGAGGTGAAGCAGATCATCCACATGCTACGCGAGTA...TGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTTGCCCTTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGACAAGCTTAGAGACCCAAAGCAGCCCGGGTGGCCTCAGAGTGTCAGCCCATCCACCTGTTCTTTaGTACTTGTCATCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTSLETQSSPGGLRVSAHPPVL*YLSSGG Trigger: GCCTCCAGATGACAAGTACCAAAGAACAGGTGGATG...GGCTGACACTCTGAGGCCACCCGGGCTGCTTTGGGTCTCTAAGCTTGTCCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATCCATCTTCCAGCAGCTaGTGCACTGTTTCTACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VSATTARVGLECGYRGWHPSSSS*CTVSTS Trigger: CGACGTAGAAACAGTGCAGCAGCTGCTGGAAGATGG...ATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | AAGGTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGCAGCTGCACAATCTaGTCATTGCCATTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KVNSRVPWAFPVASSEGRSSCTI*SLPLQE Trigger: TTCCTGCAATGGCAATGACCAGATTGTGCAGCTGCT...CCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | TGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTTGTTCAGCTTCGACTTaGCCAGGTGTAGGGGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLQQHVWAWNVATEAGICSAST*PGVGVC Trigger: GCACACCCCTACACCTGGCCAAGTCGAAGCTGAACA...AATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | AGGACAAGCTTAGAGACCCAAAGCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATACTCGCGTAGCATGTaGATGATCTGCTTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTSLETQSSPGGLRVSARYSRSM*MICFTS Trigger: GGAGGTGAAGCAGATCATCCACATGCTACGCGAGTA...TCTGGCTGACACTCTGAGGCCACCCGGGCTGCTTTGGGTCTCTAAGCTTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGCATCCACCTGTTCTTTaGTACTTGTCATCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVNSRVPWAFPVASSEGRHPPVL*YLSSGG Trigger: GCCTCCAGATGACAAGTACCAAAGAACAGGTGGATG...CCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTGGGAAGAACTATGGTCCAGGAGCAGCTaGACAATCTGGTCATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASECQPDDRNRAHGWEELWSRSS*TIWSLP Trigger: TGGCAATGACCAGATTGTGCAGCTGCTCCTGGACCA...TAGTTCTTCCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR CCA 90 bp | ACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTATGCAGCAGGAGCAGGTACTCGCGTAGCATGTaGATGATCTGGAAGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TCGPGMWLQRLALCSRSRYSRSM*MIWKEV Trigger: TACCTCCTTCCAGATCATCCACATGCTACGCGAGTA...CCTGCTCCTGCTGCATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125523.2 |
||
| 3UTR CAA 72 bp | TGTCCCTCTTCTGCTCAGAGACAGTGCAGTGTTTCCTaGGAAGGAAGGAGCAGGGCTACACTGAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPSSAQRQCSVS*EGRSRATLKCW Trigger: CCAGCACTTCAGTGTAGCCCTGCTCCTTCCTTCCAAGGAAACACTGCACTGTCTCTGAGCAGAAGAGGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR GCA 90 bp | GCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCTGGGAAGAACTACTCTTCTCCATACTCTaGATCTGCAGACTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASECQPDDRNRAHGWEELLFSIL*ICRLRE Trigger: CTCCCTCAGTCTGCAGATGCAGAGTATGGAGAAGAG...TAGTTCTTCCCAGCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| CDS-3UTR GCA 90 bp | CACGGGAGGAGTGGTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTAGCACAATCTGGTCATTaGCATTGCAGGAAGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRSGVCYNSTCGPGMWLAQSGH*HCRKQN Trigger: ATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGC...TAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACACCACTCCTCCCGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
||
| 3UTR CAA 72 bp | TGGTCCAGGAGCAGCTGCACAATCTGGTCATTGCCATaGCAGGAAGCAAAATGGAGGGCAGTTCTGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: WSRSSCTIWSLP*QEAKWRAVLPL Trigger: TAAAGGCAGAACTGCCCTCCATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGCAGCTGCTCCTGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153003.3 |
||
| CDS CCA 90 bp | GAGCGTGTACCTCCTTGCCGGTGGGCCCGAGCCGACGGTGGGGCCTaGCGGCACGCCTCAACCGCCCGGCGGGAATCTTGCAACGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ERVPPCRWARADGGA*RHASTARRESCNAV Trigger: AACTGCGTTGCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTACACGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
||
| CDS GCA 90 bp | GACGGTGGGGCCTGGCGGCACGCCTCAACCGCCCGGCGGGAATCTTaGAACGCAGTTCGTCGCGAGGCTCGACGTCCTGCTGCCACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DGGAWRHASTARRES*NAVRREARRPAATG Trigger: TCCTGTGGCAGCAGGACGTCGAGCCTCGCGACGAACTGCGTTGCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
||
| CDS CCA 90 bp | CTCTTCAGAGCGTGTACCTCCTTGCCGGTGGGCCCGAGCCGACGGTaGGGCCTGGCGGCACGCCTCAACCGCCCGGCGGGAATCTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LFRACTSLPVGPSRR*GLAARLNRPAGILQ Trigger: TTGCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTACACGCTCTGAAGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
||
| CDS-3UTR CAA 90 bp | TGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAAGAGCGTGTACCTCCTaGCCGGTGGGCCCGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WAFPVASSEGRRAAAKQGRACTS*PVGPSR Trigger: TCGGCTCGGGCCCACCGGCAAGGAGGTACACGCTCT...TCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000153003.3 |
||
| CDS CCA 90 bp | CGCTGCTCATGCCGCCCCAGGCGCTCCAGGTACTCGCGTAGCATGTaGATGATCTGGAAGGAGGTAGGGGCCGCAGGCTGCTTCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCSCRPRRSRYSRSM*MIWKEVGAAGCFTS Trigger: GGAGGTGAAGCAGCCTGCGGCCCCTACCTCCTTCCAGATCATCCACATGCTACGCGAGTACCTGGAGCGCCTGGGGCGGCATGAGCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125523.2 |
||
| CDS-3UTR CAA 90 bp | TTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCTCTACGTCGTTGGCATaGGCAGAGTCCCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FPGSELRGQEGGGKARSSSTSLA*AESLSL Trigger: GAGGCTGAGGGACTCTGCCAATGCCAACGACGTAGA...GCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000153003.3 |
||
| CDS-3UTR CAA 90 bp | GTGAACTCCAGAGTTCCCTGGGCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGTCTACGTCGTTGGCATaGGCAGAGTCCCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNSRVPWAFPVASSEGRRSTSLA*AESLSL Trigger: GAGGCTGAGGGACTCTGCCAATGCCAACGACGTAGA...CCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGCCCAGGGAACTCTGGAGTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000153003.3 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCGGGTGGCCTCAGAGTGTCAGCCAGATGACAGGAACAGAGCCCATGGCATGTTCAGCTTCGACTaGGCCAGGTGTAGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AARVASECQPDDRNRAHGMFSFD*ARCRGV Trigger: CACACCCCTACACCTGGCCAAGTCGAAGCTGAACAT...GCCATGGGCTCTGTTCCTGTCATCTGGCTGACACTCTGAGGCCACCCGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTCACTGCCCCTGTTCTTaGGTACTTGTCATCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VASSEGRRAAAKQGAASLHCPCS*VLVIWR Trigger: CCTCCAGATGACAAGTACCAAAGAACAGGGGCAGTG...AAGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156411.2 |
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| CDS-3UTR CAA 90 bp | CAGTCCCTGCTGGAGGTTCCGAGGGACCCACTGCCTGTCCTCTGCCGGCTCCCAATCTGGTCATTGCCATaGCAGGAAGCAAAATGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QSLLEVPRDPLPVLCRLPIWSLP*QEAKWR Trigger: CCTCCATTTTGCTTCCTGCAATGGCAATGACCAGAT...TGGGAGCCGGCAGAGGACAGGCAGTGGGTCCCTCGGAACCTCCAGCAGGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| CDS-3UTR CAA 90 bp | GGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCAGCCTCCCTTCATCCACCTGTTCTTaGGTACTTGTCATCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: GSELRGQEGGGKARSSLPSSTCS*VLVIWR Trigger: CCTCCAGATGACAAGTACCAAAGAACAGGTGGATGA...AGGGAGGCTGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 |
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| CDS-3UTR CAA 90 bp | ATTCGTAGTGTTTCAGTGATTGCGGGGGAAGGAGCTGCAGAGCTTTCTTTGGGCAGAGCGTGTACCTCCTaGCCGGTGGGCCCGAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: IRSVSVIAGEGAAELSLGRACTS*PVGPSR Trigger: TCGGCTCGGGCCCACCGGCAAGGAGGTACACGCTCT...GCCCAAAGAAAGCTCTGCAGCTCCTTCCCCCGCAATCACTGAAACACTACGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| CDS-3UTR CAA 90 bp | GTGTCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATATGACAGGAACATGGTaGGTGCAGGCCGCCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VSATTARVGLECGYRGWHMTGTW*VQAARC Trigger: GCACCTGGCGGCCTGCACCAACCATGTTCCTGTCAT...ATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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| CDS-3UTR CAA 90 bp | GCTTTCCCGGTAGCGAGCTCAGAGGGCAGGAGGGCGGCGGCAAAGCAAGGAGCATCATCCACCTGTTCTTaGGTACTTGTCATCTGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AFPVASSEGRRAAAKQGASSTCS*VLVIWR Trigger: CCTCCAGATGACAAGTACCAAAGAACAGGTGGATGA...TGCTCCTTGCTTTGCCGCCGCCCTCCTGCCCTCTGAGCTCGCTACCGGGAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000125523.2 |
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| CDS-3UTR CAA 90 bp | TCTGCTACAACAGCACGTGTGGGCCTGGAATGTGGCTACAGAGGCTGGCATTATATGTTCAGCTTCGACTaGGCCAGGTGTAGGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: SATTARVGLECGYRGWHYMFSFD*ARCRGV Trigger: CACACCCCTACACCTGGCCAAGTCGAAGCTGAACAT...ATAATGCCAGCCTCTGTAGCCACATTCCAGGCCCACACGTGCTGTTGTAGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040676.11 ENSMUST00000156411.2 |
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| CDS GCA 72 bp | ACAGGACCTGGAGGTAGCGCAGCGAGGACTGGGCCCTaGCCACCGACCGGCCCGGGAGGCCGGCGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGPGGSAARTGP*PPTGPGGRRRC Trigger: GCAGCGGCGCCGGCCTCCCGGGCCGGTCGGTGGGCAGGGCCCAGTCCTCGCTGCGCTACCTCCAGGTCCTGT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
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| CDS CCA 72 bp | GCGTGTACCTCCTTGCCGGTGGGCCCGAGCCGACGGTaGGGCCTGGCGGCACGCCTCAACCGCCCGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: ACTSLPVGPSRR*GLAARLNRPAG Trigger: TCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTCGGCTCGGGCCCACCGGCAAGGAGGTACACGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
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| CDS CCA 72 bp | CCTCCTTGCCGGTGGGCCCGAGCCGACGGTGGGGCCTaGCGGCACGCCTCAACCGCCCGGCGGGAATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PPCRWARADGGA*RHASTARRESC Trigger: GCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTCGGCTCGGGCCCACCGGCAAGGAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
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| CDS CAA 90 bp | CGACGGTGGGGCCTGGCGGCACGCCTCAACCGCCCGGCGGGAATCTaGCAACGCAGTTCGTCGCGAGGCTCGACGTCCTGCTGCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: RRWGLAARLNRPAGI*QRSSSRGSTSCCHR Trigger: CCTGTGGCAGCAGGACGTCGAGCCTCGCGACGAACTGCGTTGCAAGATTCCCGCCGGGCGGTTGAGGCGTGCCGCCAGGCCCCACCGTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040676.11 ENSMUST00000151889.8 ENSMUST00000153003.3 |
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| CDS CCA 72 bp | TGCCGCCCCAGGCGCTCCAGGTACTCGCGTAGCATGTaGATGATCTGGAAGGAGGTAGGGGCCGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CRPRRSRYSRSM*MIWKEVGAAGC Trigger: GCAGCCTGCGGCCCCTACCTCCTTCCAGATCATCCACATGCTACGCGAGTACCTGGAGCGCCTGGGGCGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125523.2 |
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| CDS GCA 72 bp | ATGTGGATGATCTGGAAGGAGGTAGGGGCCGCAGGCTaGTTCACCTCCAGGCGGACGGCCTCCAGACACTGG | + |
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Preference number: 6 (lower is better) Translates to: MWMIWKEVGAAG*FTSRRTASRHW Trigger: CCAGTGTCTGGAGGCCGTCCGCCTGGAGGTGAAGCAGCCTGCGGCCCCTACCTCCTTCCAGATCATCCACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125523.2 |
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| CDS GCA 72 bp | GGTCCAGGAGCAGCTGCACAATCTGGTCATTGCCATTaGAGGAAGCAAAATGGAGGGCAGTTCTGCCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: GPGAAAQSGHCH*RKQNGGQFCLY Trigger: ATAAAGGCAGAACTGCCCTCCATTTTGCTTCCTGCAATGGCAATGACCAGATTGTGCAGCTGCTCCTGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040676.11 |
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