RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD50 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044864

Ensembl transcript IDs: ENSMUST00000094300.4, ENSMUST00000120875.8, ENSMUST00000156038.2

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTaGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGAAGGGCAGC +
Preference number: 1 (lower is better)
Translates to: WLYGGTAVYICIYSV*WRLLQHGGCAEKGS
Trigger: GCTGCCCTTCTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp TTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTaGAGACTGCTTCAGCATGGGGGCTGTGCTGAGAAGGGCAGCCTT +
Preference number: 1 (lower is better)
Translates to: LYGGTAVYICIYSVW*RLLQHGGCAEKGSL
Trigger: AAGGCTGCCCTTCTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp GCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTTTACCAAATaGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCA +
Preference number: 1 (lower is better)
Translates to: AFAETPDRGTCTFTK*ENTQNRVWLYGGTA
Trigger: TGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp AGCCAAACAGCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTaGTTTTGGTTGAGGAATCTGGTAGGGGTGGGAGAGGATGGAATA +
Preference number: 1 (lower is better)
Translates to: SQTAGELVPVSEVLD*FWLRNLVGVGEDGI
Trigger: TATTCCATCCTCTCCCACCCCTACCAGATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGCTGTTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 90 bp ACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTaGATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGT +
Preference number: 1 (lower is better)
Translates to: TQNRVWLYGGTAVYI*IYSVWWRLLQHGGC
Trigger: ACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp TGTGCCTGCTCTGTCACATTAAGCCTGACACAGACGGTCCTTGATTaGGAAAATGGAGATTTAAACTACCCGAGTGACTCTACACCACCA +
Preference number: 1 (lower is better)
Translates to: CACSVTLSLTQTVLD*ENGDLNYPSDSTPP
Trigger: TGGTGGTGTAGAGTCACTCGGGTAGTTTAAATCTCCATTTTCCCAATCAAGGACCGTCTGTGTCAGGCTTAATGTGACAGAGCAGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 90 bp CTGCTCCACATTCCTCCCTTAACCATGGCATCCAGACATCCTGTGTaGAATTGTGCAAAGAAGAAAACAGGAAAGAGTTTGTGGCTAGAA +
Preference number: 1 (lower is better)
Translates to: LLHIPPLTMASRHPV*NCAKKKTGKSLWLE
Trigger: TTCTAGCCACAAACTCTTTCCTGTTTTCTTCTTTGCACAATTGCACACAGGATGTCTGGATGCCATGGTTAAGGGAGGAATGTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 90 bp ACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTaGCCGTGGCACATGCACGTTTACCAAATGGGAAAATACTCAAAA +
Preference number: 1 (lower is better)
Translates to: TQKTINTEHCLCGDT*PWHMHVYQMGKYSK
Trigger: TTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 90 bp CATTCCTCCCTTAACCATGGCATCCAGACATCCTGTGTGCAATTGTaGAAAGAAGAAAACAGGAAAGAGTTTGTGGCTAGAAAAGTGCAG +
Preference number: 1 (lower is better)
Translates to: HSSLNHGIQTSCVQL*KEENRKEFVARKVQ
Trigger: CTGCACTTTTCTAGCCACAAACTCTTTCCTGTTTTCTTCTTTGCACAATTGCACACAGGATGTCTGGATGCCATGGTTAAGGGAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 90 bp AAAGTGCAGGCCCATCACTTCTATCAAATAACAAAACGAGTGCTGTaGCTGATGGTTCCTGGTATCACTTGTGATAGACAGCACACTGTA +
Preference number: 1 (lower is better)
Translates to: KVQAHHFYQITKRVL*LMVPGITCDRQHTV
Trigger: TACAGTGTGCTGTCTATCACAAGTGATACCAGGAACCATCAGTCACAGCACTCGTTTTGTTATTTGATAGAAGTGATGGGCCTGCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 90 bp CAAATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTaGAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCA +
Preference number: 1 (lower is better)
Translates to: QMGKYSKPGLVVWRN*SLHLHLFGVVETAS
Trigger: TGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp GGCACATGCACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTaGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTG +
Preference number: 1 (lower is better)
Translates to: GTCTFTKWENTQNRV*LYGGTAVYICIYSV
Trigger: CACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 90 bp AGCAGTGAGCATTCAATTACAATGATAGATTACATTTCATTTAGCTaGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAGCG +
Preference number: 1 (lower is better)
Translates to: SSEHSITMIDYISFS*RSRRQPVNDLGIRA
Trigger: CGCTCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAATGTAATCTATCATTGTAATTGAATGCTCACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 90 bp GGACACAAAGACACTTGGAAACACAACTCCCTAATGCCTTGTCTTTaGCCTTTGGTCACAAGGTGCAACTTTCAAAGTAATAAAATTAAA +
Preference number: 1 (lower is better)
Translates to: GHKDTWKHNSLMPCL*PLVTRCNFQSNKIK
Trigger: TTTAATTTTATTACTTTGAAAGTTGCACCTTGTGACCAAAGGGCAAAGACAAGGCATTAGGGAGTTGTGTTTCCAAGTGTCTTTGTGTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACCCTGGAGTCTCTGCCTaGCACGTGCCCCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENPGVSA*HVPPGT
Trigger: AGTGCCTGGGGGCACGTGTCAGGCAGAGACTCCAGG...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGGTGTGGTGGAGACTaGTTCAGCATGGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHARCGGD*FSMGAV
Trigger: CACAGCCCCCATGCTGAAGCAGTCTCCACCACACCG...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp GACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAAGGCTCAGAGCCTCTGTaGATGCACAGAGTAGCTGCA +
Preference number: 2 (lower is better)
Translates to: DGGQSKQNEQLHSQTAGEGSEPL*MHRVAA
Trigger: TGCAGCTACTCTGTGCATTCACAGAGGCTCTGAGCC...TTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp CATATGTGTGTACACAGGTCACAGGGTCACAGTAAAAAGCTGACAGTGAGATACTGGACCTGGAGTCTCTaGCTGACACGTGCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: HMCVHRSQGHSKKLTVRYWTWSL*LTRAPR
Trigger: CCTGGGGGCACGTGTCAGGCAGAGACTCCAGGTCCA...GTATCTCACTGTCAGCTTTTTACTGTGACCCTGTGACCTGTGTACACACATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
3UTR-3UTR CCA 90 bp CGTGGCACATGCACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTGGTTGCATCTGGCTTCCATCTaGCAGCTGAGCGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RGTCTFTKWENTQNRVWLHLASI*QLSGSS
Trigger: GGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATG...CAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGCCTGGAGTCTCTGCCTaGCACGTGCCCCCAGGCACT +
Preference number: 2 (lower is better)
Translates to: SMYILGYLHTPHRANNRKPGVSA*HVPPGT
Trigger: AGTGCCTGGGGGCACGTGTCAGGCAGAGACTCCAGG...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp AAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTTTAATTTATTCGGTGTGGTaGAGACTGCTTCAGCATGGG +
Preference number: 2 (lower is better)
Translates to: KYGTLPLRRHLTVAHARLIYSVW*RLLQHG
Trigger: CCCATGCTGAAGCAGTCTCCACCACACCGAATAAAT...TAAACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACACAGGAAAGAGTTTGTaGCTAGAAAAGTGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENTGKSL*LEKCRP
Trigger: GGGCCTGCACTTTTCTAGCCACAAACTCTTTCCTGT...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 90 bp AGTACACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTaGCGGAGACACCTGACCGTGGCACATGCACGTTTACCAAATGGG +
Preference number: 2 (lower is better)
Translates to: STHHNAENNKYGTLP*RRHLTVAHARLPNG
Trigger: CCCATTTGGTAAACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACCGGTGTGGTGGAGACTaGTTCAGCATGGGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNRCGGD*FSMGAV
Trigger: CACAGCCCCCATGCTGAAGCAGTCTCCACCACACCG...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp CTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCATCTGGCTTCCATCTaGCAGCTGAGCGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: LKTGFGCMEELQFTSAFIHLASI*QLSGSS
Trigger: GGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATG...AATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp GCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCTTCGAGGGACTGGTTGGCATGTaGCTGCTCTGTCACATTAAG +
Preference number: 2 (lower is better)
Translates to: AYFFHVSPHVIPGSLTFEGLVGM*LLCHIK
Trigger: CTTAATGTGACAGAGCAGGCACATGCCAACCAGTCC...CTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGTTGAGGAATGTACTGGACTGGTTTTaGTTGAGGAATCTGGTAGGG +
Preference number: 2 (lower is better)
Translates to: AGELVPVSEVLDWFWLRNVLDWF*LRNLVG
Trigger: CCCTACCAGATTCCTCAACCAAAACCAGTCCAGTAC...ATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 90 bp GTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTaGTCTGCAACTACATTTGCGGAAAGGGTTGACGGAGGGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VIYTPHTERTTERKH*SATTFAERVDGGQS
Trigger: ACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp AGAGTAGCTGCAGTTGGACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGTTTTTATCCAATGCTaGAGGTTAGTGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: RVAAVGLVGMCLLCHIKPVFIQC*RLVDRK
Trigger: TTTCCTGTCCACTAACCTTCAGCATTGGATAAAAAC...AGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTCCAACTGCAGCTACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp GAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATCCGGGTTTGGTTGTATaGAGGAACTGCAGTTTACAT +
Preference number: 2 (lower is better)
Translates to: ENNKYGTLPLRRHLTVAHPGLVV*RNCSLH
Trigger: ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGG...ATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 90 bp ACACAGAGCGAACAACAGAAAGAAAGCATTTGTCTGCAACTACATTaGCGGAAAGGGTTGACGGAGGGCAGAGTAAGCAAAACGAACAGT +
Preference number: 2 (lower is better)
Translates to: TQSEQQKESICLQLH*RKGLTEGRVSKTNS
Trigger: ACTGTTCGTTTTGCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCTTTCTTTCTGTTGTTCGCTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGCTCCTCCAACCACAATaGCTTCTGTCTCATACAACT +
Preference number: 2 (lower is better)
Translates to: TDDTQEMSLADTEKHKARLLQPQ*LLSHTT
Trigger: AGTTGTATGAGACAGAAGGCATTGTGGTTGGAGGAG...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 90 bp CAACAGAAAGAAAGCATTTGTCTGCAACTACATTTGCGGAAAGGGTaGACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAA +
Preference number: 2 (lower is better)
Translates to: QQKESICLQLHLRKG*TEGRVSKTNSCIAK
Trigger: TTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCTTTCTTTCTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCCAAGGCTGGGGAGATaGACAGGACTCAACTCAAGG +
Preference number: 2 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFPRLGR*TGLNSR
Trigger: CCTTGAGTTGAGTCCTGTTCATCTCCCCAGCCTTGG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp AAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAAAGATGGTCCATCTATTTaGAGGTGGGATGACAGGCAG +
Preference number: 2 (lower is better)
Translates to: KSTRQGKASTNTQSVSLKDGPSI*RWDDRQ
Trigger: CTGCCTGTCATCCCACCTGCAAATAGATGGACCATC...TTTGAGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 90 bp GCTTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATaGCAAGCAATTACGCATCTGAGCTTCCACAAAACAACACTCCTT +
Preference number: 2 (lower is better)
Translates to: ASTNTQSVSLKESHA*QAITHLSFHKTTLL
Trigger: AAGGAGTGTTGTTTTGTGGAAGCTCAGATGCGTAATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp GTGGGACCGTTTCTTATCTTTGTAATAGAGAAGTCATTGTTTTTCCCAGTTGTGGGACTGGTTGGCATGTaGCTGCTCTGTCACATTAAG +
Preference number: 2 (lower is better)
Translates to: VGPFLIFVIEKSLFFPVVGLVGM*LLCHIK
Trigger: CTTAATGTGACAGAGCAGGCACATGCCAACCAGTCC...CACAACTGGGAAAAACAATGACTTCTCTATTACAAAGATAAGAAACGGTCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGTCCAGACATCCTGTGTaGAATTGTGCAAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: TDDTQEMSLADTEKHKARSRHPV*NCAKKK
Trigger: TTTCTTCTTTGCACAATTGCACACAGGATGTCTGGA...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATATTTATTCGGTGTGGTaGAGACTGCTTCAGCATGGG +
Preference number: 2 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHIYSVW*RLLQHG
Trigger: CCCATGCTGAAGCAGTCTCCACCACACCGAATAAAT...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp GCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCTTCGAGCAGACGGTCCTTGATTaGGAAAATGGAGATTTAAAC +
Preference number: 2 (lower is better)
Translates to: AYFFHVSPHVIPGSLTFEQTVLD*ENGDLN
Trigger: GTTTAAATCTCCATTTTCCCAATCAAGGACCGTCTG...CTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACACAGGAAAGAGTTTGTaGCTAGAAAAGTGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNTGKSL*LEKCRP
Trigger: GGGCCTGCACTTTTCTAGCCACAAACTCTTTCCTGT...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp TGCCTTCCAAGAGTCCTGTTAAGTGTCATTAATCAATGTCCCATAGGGACAAGAAAGCAATTACGCATCTaGGCTTCCACAAAACAACAC +
Preference number: 2 (lower is better)
Translates to: CLPRVLLSVINQCPIGTRKQLRI*ASTKQH
Trigger: GTGTTGTTTTGTGGAAGCTCAGATGCGTAATTGCTT...TCTTGTCCCTATGGGACATTGATTAATGACACTTAACAGGACTCTTGGAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp GCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCTTCGAGGTTGTATGGAGGAACTaGAGTTTACATCTGCATTTA +
Preference number: 2 (lower is better)
Translates to: AYFFHVSPHVIPGSLTFEVVWRN*SLHLHL
Trigger: TAAATGCAGATGTAAACTGCAGTTCCTCCATACAAC...CTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAATGCACAGAGTAGCTaGAGTTGGACTGGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: SMYILGYLHTPHRANNRKNAQSS*SWTGWH
Trigger: ATGCCAACCAGTCCAACTGCAGCTACTCTGTGCATT...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAAATGCACAGAGTAGCTaGAGTTGGACTGGTTGGCAT +
Preference number: 2 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKNAQSS*SWTGWH
Trigger: ATGCCAACCAGTCCAACTGCAGCTACTCTGTGCATT...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp ACAGACACTCGTTTTTATCCAATGCTGAAGGTTAGTGGACAGGAAACAGTTGCATGCACGTTTACCAAATaGGAAAATACTCAAAACCGG +
Preference number: 2 (lower is better)
Translates to: TDTRFYPMLKVSGQETVACTFTK*ENTQNR
Trigger: CCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCA...TGCAACTGTTTCCTGTCCACTAACCTTCAGCATTGGATAAAAACGAGTGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CCA 90 bp ACTGAAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAGACGGTCCTTGATTaGGAAAATGGAGATTTAAAC +
Preference number: 2 (lower is better)
Translates to: TEKHKARESFHKHSKCFSQTVLD*ENGDLN
Trigger: GTTTAAATCTCCATTTTCCCAATCAAGGACCGTCTG...AGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 90 bp CAATGTCCCATAGGGACAAGAATTCAATCCTTGAAACATTCACATTaGACTTGTCAGCATCAACCACCTGTCACCTTAAATTTGAGTGAG +
Preference number: 2 (lower is better)
Translates to: QCPIGTRIQSLKHSH*TCQHQPPVTLNLSE
Trigger: CTCACTCAAATTTAAGGTGACAGGTGGTTGATGCTGACAAGTCAAATGTGAATGTTTCAAGGATTGAATTCTTGTCCCTATGGGACATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR TCA 90 bp TTGGACAGTGTTTTTGTTGTTGTTGTTGTTTTAATCTCCCTCTCCTTCAATGGTTCCAAGCTTCAGGAATaGTGGTCCATCTATTTGCAG +
Preference number: 2 (lower is better)
Translates to: LDSVFVVVVVLISLSFNGSKLQE*WSIYLQ
Trigger: CTGCAAATAGATGGACCATCATTCCTGAAGCTTGGA...ACCATTGAAGGAGAGGGAGATTAAAACAACAACAACAACAAAAACACTGTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
3UTR-3UTR CCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTTACATTTCATTTAGCTaGAGGAGTCGAAGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFYISFS*RSRRQP
Trigger: TGGCTGCCTTCGACTCCTCCAGCTAAATGAAATGTA...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR GCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAATGGACAGGAAACAGTTaGAAGAATTGCTTTATTGAG +
Preference number: 2 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKWTGNS*KNCFIE
Trigger: CTCAATAAAGCAATTCTTGCAACTGTTTCCTGTCCA...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp TCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTaGCAGCTGAGCGGCTCCTCCAACCACAATGCCTTC +
Preference number: 3 (lower is better)
Translates to: SQQHALRHLASI*QLSGSSNHNAF
Trigger: GAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
3UTR TCA 72 bp AGAGCGTCATCCTTAGTTGGACCTGGAGTCTCTGCCTaGCACGTGCCCCCAGGCACTGACTGCTCTGTCCCT +
Preference number: 3 (lower is better)
Translates to: RASSLVGPGVSA*HVPPGTDCSVP
Trigger: AGGGACAGAGCAGTCAGTGCCTGGGGGCACGTGTCAGGCAGAGACTCCAGGTCCAACTAAGGATGACGCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 72 bp CAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTaGTTCAGCATGGGGGCTGTGCTGAGAAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: QFTSAFIRCGGD*FSMGAVLRRAA
Trigger: GGCTGCCCTTCTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp GGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTaGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: GGTAVYICIYSV*WRLLQHGGCAE
Trigger: CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTaGTTTTGGTTGAGGAATCTGGTAGGGGTGGGAGAG +
Preference number: 3 (lower is better)
Translates to: AGELVPVSEVLD*FWLRNLVGVGE
Trigger: CTCTCCCACCCCTACCAGATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 72 bp GGGTTGACGGAGGGCAGAGTAAGCAAAACGAACAGTTaGATAGCCAAACAGCGGGAGAACTTGTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: GLTEGRVSKTNS*IAKQRENLFLS
Trigger: AGACAGGAACAAGTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp GGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTaGAGACTGCTTCAGCATGGGGGCTGTGCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: GTAVYICIYSVW*RLLQHGGCAEK
Trigger: CTTCTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CAA 90 bp CAAAATGACCAAGTACAGCAAGCAGGCTGGCTACAGCACCCTGGTCAGCCTGGTCCTGTCACCTTAAATTaGAGTGAGTTCATCAGCTGT +
Preference number: 3 (lower is better)
Translates to: QNDQVQQAGWLQHPGQPGPVTLN*SEFISC
Trigger: ACAGCTGATGAACTCACTCAAATTTAAGGTGACAGG...ACCAGGCTGACCAGGGTGCTGTAGCCAGCCTGCTTGCTGTACTTGGTCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 72 bp AGCTTCCACAAAACAACACTCCTTGTGCCCTCCACATaGAGTGACCATCACTGGCCTCTCACTAAAACATTC +
Preference number: 3 (lower is better)
Translates to: SFHKTTLLVPST*SDHHWPLTKTF
Trigger: GAATGTTTTAGTGAGAGGCCAGTGATGGTCACTGCATGTGGAGGGCACAAGGAGTGTTGTTTTGTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CAA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACGTAATAGAGAAGTCATaGTTTTTCCCAGTTGTGGTC +
Preference number: 3 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENVIEKS*FFPVVV
Trigger: GACCACAACTGGGAAAAACAATGACTTCTCTATTAC...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 72 bp TTGAGTGAGTTCATCAGCTGTCCCTCATCCTGGGTATaGCTGACAGATGACACACAGGAAATGAGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: LSEFISCPSSWV*LTDDTQEMSLA
Trigger: AGCCAAACTCATTTCCTGTGTGTCATCTGTCAGTCATACCCAGGATGAGGGACAGCTGATGAACTCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 72 bp CGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTaGATTTATTCGGTGTGGTGGAGACTGCTTCAGCAT +
Preference number: 3 (lower is better)
Translates to: RVWLYGGTAVYI*IYSVWWRLLQH
Trigger: ATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp GAGACACCTGACCGTGGCACATGCACGTTTACCAAATaGGAAAATACTCAAAACCGGGTTTGGTTGTATGGA +
Preference number: 3 (lower is better)
Translates to: ETPDRGTCTFTK*ENTQNRVWLYG
Trigger: TCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACGGTCAGGTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 72 bp TTGTCAGCATCAACCACCTGTCACCTTAAATTTGAGTaGGTTCATCAGCTGTCCCTCATCCTGGGTATGACT +
Preference number: 3 (lower is better)
Translates to: LSASTTCHLKFE*VHQLSLILGMT
Trigger: AGTCATACCCAGGATGAGGGACAGCTGATGAACTCACTCAAATTTAAGGTGACAGGTGGTTGATGCTGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CAA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGCATTGTTTTTCCCAGTaGTGGTCCTATCCCCTCCCC +
Preference number: 3 (lower is better)
Translates to: SMYILGYLHTPHRANNRKHCFSQ*WSYPLP
Trigger: GGGGAGGGGATAGGACCACAACTGGGAAAAACAATG...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 72 bp TCTTTCATGTTTCACCACATGTCATACCAGGGTCACTaGCCTTCGAGAAGGGGTATAATGGGTCACTACAAA +
Preference number: 3 (lower is better)
Translates to: SFMFHHMSYQGH*PSRRGIMGHYK
Trigger: TTTGTAGTGACCCATTATACCCCTTCTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp TCTGTCACATTAAGCCTGACACAGACGGTCCTTGATTaGGAAAATGGAGATTTAAACTACCCGAGTGACTCT +
Preference number: 3 (lower is better)
Translates to: SVTLSLTQTVLD*ENGDLNYPSDS
Trigger: AGAGTCACTCGGGTAGTTTAAATCTCCATTTTCCCAATCAAGGACCGTCTGTGTCAGGCTTAATGTGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR TCA 72 bp GCCCATCACTTCTATCAAATAACAAAACGAGTGCTGTaGCTGATGGTTCCTGGTATCACTTGTGATAGACAG +
Preference number: 3 (lower is better)
Translates to: AHHFYQITKRVL*LMVPGITCDRQ
Trigger: CTGTCTATCACAAGTGATACCAGGAACCATCAGTCACAGCACTCGTTTTGTTATTTGATAGAAGTGATGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR GCA 72 bp ATTCCTCCCTTAACCATGGCATCCAGACATCCTGTGTaGAATTGTGCAAAGAAGAAAACAGGAAAGAGTTTG +
Preference number: 3 (lower is better)
Translates to: IPPLTMASRHPV*NCAKKKTGKSL
Trigger: CAAACTCTTTCCTGTTTTCTTCTTTGCACAATTGCACACAGGATGTCTGGATGCCATGGTTAAGGGAGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CAA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCCTAATGCCTTGTCTTaGCCCTTTGGTCACAAGGTG +
Preference number: 3 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFPNALS*PFGHKV
Trigger: CACCTTGTGACCAAAGGGCAAAGACAAGGCATTAGG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR-3UTR CAA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGTGGACACAAAGACACTaGGAAACACAACTCCCTAAT +
Preference number: 3 (lower is better)
Translates to: SMYILGYLHTPHRANNRKWTQRH*ETQLPN
Trigger: ATTAGGGAGTTGTGTTTCCAAGTGTCTTTGTGTCCA...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp ACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTaGTTGTATGGAGGAACTGCAGTTTACATCTGCATT +
Preference number: 3 (lower is better)
Translates to: TFTKWENTQNRV*LYGGTAVYICI
Trigger: AATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp TGCAATTGTGCAAAGAAGAAAACAGGAAAGAGTTTGTaGCTAGAAAAGTGCAGGCCCATCACTTCTATCAAA +
Preference number: 3 (lower is better)
Translates to: CNCAKKKTGKSL*LEKCRPITSIK
Trigger: TTTGATAGAAGTGATGGGCCTGCACTTTTCTAGCCACAAACTCTTTCCTGTTTTCTTCTTTGCACAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CCA 72 bp CATTCAATTACAATGATAGATTACATTTCATTTAGCTaGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGG +
Preference number: 3 (lower is better)
Translates to: HSITMIDYISFS*RSRRQPVNDLG
Trigger: CCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAATGTAATCTATCATTGTAATTGAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCCGCACCATCTCCACGTaGCCCTGCCAGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: RAGVSLSSTPSGIWLPSGRTIST*PCQQET
Trigger: CGTCTCCTGCTGGCAGGGTCACGTGGAGATGGTGCG...GCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCGACACCACCTCGGTGTaGCCGCCCCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RAGVSLSSTPSGIWLPSGDTTSV*PPQAAD
Trigger: GTCTGCTGCTTGGGGCGGCCACACCGAGGTGGTGTC...GCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCGCACCATCTCCACGTaGCCCTGCCAGCAGGAGACG +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQRTIST*PCQQET
Trigger: CGTCTCCTGCTGGCAGGGTCACGTGGAGATGGTGCG...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CACAGTACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTGTGGCCACCCCAGGCTaGTGCACGCAGAGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: HSTAGGSQSQQHALRHLAVATPG*CTQSSS
Trigger: CGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCAC...AGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGTACTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCGCGGCTGGGCACGGCTaGTGTCCTGAGATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASIAAGHG*CPEMKG
Trigger: TCCCTTCATCTCAGGACAGCAGCCGTGCCCAGCCGC...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGACCTCTCTGCAGGCTaGCGGGCGAACTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GRESVSAARPQASGFHLADLSAG*RANLAT
Trigger: TGTGGCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTC...TGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGAGGTGCTGCCGCAGTaGCTCCTCTTGATCCAGGCG +
Preference number: 4 (lower is better)
Translates to: RESVSAARPQASGFHLAAEVLPQ*LLLIQA
Trigger: CGCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTC...AGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCTTTACCTCTGCGCCATaGTCCAGCAGGTGCTCTACG +
Preference number: 4 (lower is better)
Translates to: RAGVSLSSTPSGIWLPSGFTSAP*SSRCST
Trigger: CGTAGAGCACCTGCTGGACCATGGCGCAGAGGTAAA...GCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCGCTTCAGGGCTTGTTTaGGGTTCAGCTCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASIASGLV*GSALSP
Trigger: CGGAGACAGAGCTGAACCTCAAACAAGCCCTGAAGC...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCCAGCCGACCCAGACTTaGTGGAGTTGTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASIQPTQT*WSCLTC
Trigger: GCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTG...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTATGCCTTCGCTGTCGATaGTGTCCACGGCTGCGCCCC +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVCLRCR*CPRLRP
Trigger: GGGGCGCAGCCGTGGACAGCATCGACAGCGAAGGCA...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTTCTGAGCCGTGGCTGTaGAGGACGTCGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RESVSAARPQASGFHLAASEPWL*RTSFSE
Trigger: CTCTGAGAACGACGTCCTCCACAGCCACGGCTCAGA...AGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCCCGACCCAGACTTGCTaGAGTTGTCTGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASIPTQTC*SCLTCL
Trigger: GAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGG...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GTCAGGACACAGTACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCAGAGAAGCAGGAGCCATaGGGGAAAGAACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: VRTQYCGRESVSAARPQAEKQEP*GKELVV
Trigger: CACCACGAGTTCTTTCCCCCATGGCTCCTGCTTCTC...TGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGTACTGTGTCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCCGTTGTTATCGGTGTaGTCGACATCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQPLLSV*STSAPP
Trigger: AGGAGGAGCAGATGTCGATCACACCGATAACAACGG...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGATAGTCAGAGACTaGATCTTGGACGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQLIVRD*ILDGAD
Trigger: GTCGGCACCGTCCAAGATGCAGTCTCTGACTATCAG...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTACCCCGGAGGGAAGGCTaGAGATCTCCTCCGCCAGTA +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVPRREG*RSPPPV
Trigger: TACTGGCGGAGGAGATCTGCAGCCTTCCCTCCGGGG...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AGAGCACCGAGTCCCCAAGGCTGGGGAGATGAACAGGACTCAACTCAAGGATCACCTGCTGCGAGGCAGTaGGTGCTGCTGGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAPSPQGWGDEQDSTQGSPAARQ*VLLDLL
Trigger: GAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGG...TGATCCTTGAGTTGAGTCCTGTTCATCTCCCCAGCCTTGGGGACTCGGTGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGCTGTCCTGAGATaGAGGGACCACGATTTTACA +
Preference number: 4 (lower is better)
Translates to: GRESVSAARPQASGFHLAAAVLR*RDHDFT
Trigger: TGTAAAATCGTGGTCCCTTCATCTCAGGACAGCAGC...TGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTTTCCTTCTTGTAGTTaGAGCTGGGGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASIFPSCS*SWGQSP
Trigger: AGGGCTCTGACCCCAGCTTCAACTACAAGAAGGAAA...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGCCTCCTGGGCTGCGATaGAGAGGGCGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAEPPGLR*RGRWLL
Trigger: AAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGG...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGGCTACTCCCAGACTTaGCAACAGGTCCCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: RESVSAARPQASGFHLAAGYSQT*QQVPFC
Trigger: ACAAAAGGGGACCTGTTGCCAAGTCTGGGAGTAGCC...AGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGTCAGAGCCCTCAATCTaGAGCTTCAGGGCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQSEPSI*SFRACL
Trigger: CAAACAAGCCCTGAAGCTCCAGATTGAGGGCTCTGA...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCACATTGTCTGCTGCATTaGCATCTGCATGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GRESVSAARPQASGFHLAHCLLH*HLHGKQ
Trigger: TTGCTTGCCATGCAGATGTCAATGCAGCAGACAATG...TGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGATCTGCTCCGTGAATaGCAGGCTATGGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: RESVSAARPQASGFHLAADLLRE*QAMETV
Trigger: GACAGTTTCCATAGCCTGTCATTCACGGAGCAGATC...AGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTACGGTGGCTCCTTGGTTaGATGTGTGGTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVRWLLG*MCGPPQ
Trigger: CTGTGGTGGACCACACATGCAACCAAGGAGCCACCG...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGTTCCAGCAAAACCTaGACTACATCCACATGTCCC +
Preference number: 4 (lower is better)
Translates to: TAGGSQSQQHALRHLASICSSKT*TTSTCP
Trigger: GGGACATGTGGATGTAGTGCAGGTTTTGCTGGAACA...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGCCCCGGAGGGAAGGCTaGAGATCTCCTCCGCCAGTA +
Preference number: 4 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAEPRREG*RSPPPV
Trigger: TACTGGCGGAGGAGATCTGCAGCCTTCCCTCCGGGG...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGAGTAGCTGCAGTTGGACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGGGCCGTCTTCCCACTaGCAGGCCCTCCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: RVAAVGLVGMCLLCHIKPGPSSH*QALLPA
Trigger: TGCTGGTAGGAGGGCCTGGCAGTGGGAAGACGGCCC...AGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTCCAACTGCAGCTACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACACACCTTTTAAATaGTTCCGCTGGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QHALRHLASIWQLSGSSNHTPFK*FRWVPL
Trigger: GAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTG...GTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGGAAGCTGCACCACTTTaGCATGGCCCTGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAEEAAPL*HGPARL
Trigger: CAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTC...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCTCCAGCTGCAAGTTTaGATTAATCAAGTGCAAGGC +
Preference number: 4 (lower is better)
Translates to: QHALRHLASIWQLSGSSNLQLQV*INQVQG
Trigger: GCCTTGCACTTGATTAATTCAAACTTGCAGCTGGAG...GTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCATCACATATTAACCTGTaGCCCTCAAAAGCTGCCATG +
Preference number: 4 (lower is better)
Translates to: GRESVSAARPQASGFHLASHINL*PSKAAM
Trigger: CATGGCAGCTTTTGAGGGTCACAGGTTAATATGTGA...TGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGGGCAGCCTTACTGGGTAGGCACATGACAGTAAGTCAGGACACAGTACTGCGGTGCCAGGCTGCAGACTaGAAGGCTGAGCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RAALLGRHMTVSQDTVLRCQAAD*KAERFS
Trigger: TGAGAAGCGCTCAGCCTTGCAGTCTGCAGCCTGGCA...CCGCAGTACTGTGTCCTGACTTACTGTCATGTGCCTACCCAGTAAGGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGAGTAGCTGCAGTTGGACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGCGGCTGGGCACGGCTaGTGTCCTGAGATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RVAAVGLVGMCLLCHIKPAAGHG*CPEMKG
Trigger: TCCCTTCATCTCAGGACAGCAGCCGTGCCCAGCCGC...AGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTCCAACTGCAGCTACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACGCCGACGAGGGACTGTaGAGTGGCTGGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENADEGL*SGWTRT
Trigger: TGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGC...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGTTAACCACCTTTGTGTaGCCTTGTCTAGCAGCTAGA +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQLTTFV*PCLAAR
Trigger: TCTAGCTGCTAGACAAGGGCACACAAAGGTGGTTAA...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AGGGCAGCCTTACTGGGTAGGCACATGACAGTAAGTCAGGACACAGTACTGCGGTGCACCACTTTGACATaGCCCTGCCAGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: RAALLGRHMTVSQDTVLRCTTLT*PCQAAD
Trigger: GTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCA...CCGCAGTACTGTGTCCTGACTTACTGTCATGTGCCTACCCAGTAAGGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TGGCTACAGCACCCTGGTCAGCCTGGTCCTCGCCAGAAGCTGTTTTTGTTCTACTCTGAGCCGTGGCTGTaGAGGACGTCGTTCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WLQHPGQPGPRQKLFLFYSEPWL*RTSFSE
Trigger: CTCTGAGAACGACGTCCTCCACAGCCACGGCTCAGA...GTAGAACAAAAACAGCTTCTGGCGAGGACCAGGCTGACCAGGGTGCTGTAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACGACCTCTCTGCAGGCTaGCGGGCGAACTTGGCCACA +
Preference number: 4 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENDLSAG*RANLAT
Trigger: TGTGGCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTC...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTAGGCTCGAGGAGACTTTaGACGGCTGGATCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVGSRRL*TAGSLS
Trigger: GCTAAGAGATCCAGCCGTCCAAAGTCTCCTCGAGCC...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATCAGCCGTCTCCTTGGTaGGGTGCTGCCGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: ENNKYGTLPLRRHLTVAHQPSPW*GAAAVP
Trigger: AGGCACTGCGGCAGCACCTCACCAAGGAGACGGCTG...ATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GTCAGGACACAGTACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATGCTGCATTGACATCTaGATGGCAAGCAATAAGTAC +
Preference number: 4 (lower is better)
Translates to: VRTQYCGRESVSAARPQACCIDI*MASNKY
Trigger: GTACTTATTGCTTGCCATGCAGATGTCAATGCAGCA...TGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGTACTGTGTCCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGACACAGACGGTCCTTTGCCAGGCTGCAGACTaGAAGGCTGAGCGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: DWLACACSVTLSLTQTVLCQAAD*KAERFS
Trigger: TGAGAAGCGCTCAGCCTTGCAGTCTGCAGCCTGGCA...AAGGACCGTCTGTGTCAGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCCCTCCTGGGCTGCGATaGAGAGGGCGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HTTTQKTINTEHCLCGDTPPGLR*RGRWLL
Trigger: AAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGG...GGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACAATGCCTTCTGTCTCATACCATGGTCCAGCAGGTaGTCTACGATCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ASIWQLSGSSNHNAFCLIPWSSR*STISLW
Trigger: CCACAGAGAGATCGTAGAGCACCTGCTGGACCATGG...TATGAGACAGAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTCTGACGCGTGCCCTTTaGTTGCAGGCACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: NKYGTLPLRRHLTVAHARLTRAL*LQAHRA
Trigger: CGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAG...ACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTCATCTGGCTTCCATCTaGCAGCTGAGCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NKYGTLPLRRHLTVAHARHLASI*QLSGSS
Trigger: GGAGGAGCCGCTCAGCTGCCAGATGGAAGCCAGATG...ACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS-3UTR TCA 90 bp AGAGCACCGAGTCCCCAAGGCTGGGGAGATGAACAGGACTCAACTCAAGGATCAGCTGGATCTGCTCCGTaGATGACAGGCTATGGAAAC +
Preference number: 4 (lower is better)
Translates to: RAPSPQGWGDEQDSTQGSAGSAP*MTGYGN
Trigger: GTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGC...TGATCCTTGAGTTGAGTCCTGTTCATCTCCCCAGCCTTGGGGACTCGGTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCCCTGCTGCGAGGCAGTaGGTGCTGCTGGATCTGCTC +
Preference number: 4 (lower is better)
Translates to: HTTTQKTINTEHCLCGDTPAARQ*VLLDLL
Trigger: GAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGG...GGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CACAGTACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTCCCCTTTTGTCAAACTaGGTCATTTCATACTCTAGA +
Preference number: 4 (lower is better)
Translates to: HSTAGGSQSQQHALRHLAPLLSN*VISYSR
Trigger: TCTAGAGTATGAAATGACTCAGTTTGACAAAAGGGG...AGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGTACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AGCATTTGTCTGCAACTACATTTGCGGAAAGGGTTGACGGAGGGCAGAGTAAGCTGCTCTGCTGGTGGATaGGAAACTGCGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SICLQLHLRKGLTEGRVSCSAGG*ETAAGH
Trigger: GTGCCCAGCCGCAGTTTCTCATCCACCAGCAGAGCA...GCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTACTGAGTCCTGGGCTTTaGAGAAGTGGAAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVLSPGL*RSGKPK
Trigger: CTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAG...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGTTTTCAGAGAATTGTTaGACAGGGATGACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: GGSQSQQHALRHLASIWQFSENC*TGMTFA
Trigger: GGCAAAAGTCATCCCTGTCCAACAATTCTCTGAAAA...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGGAGGCTCTGCGGGGGTaGCTTCATCCCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: TDDTQEMSLADTEKHKAREALRG*LHPQEW
Trigger: CCACTCCTGGGGATGAAGCCACCCCCGCAGAGCCTC...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AGCATTTGTCTGCAACTACATTTGCGGAAAGGGTTGACGGAGGGCAGAGTAAGCAGGACAATGTCCTCGTaGCCACCCCAGGCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SICLQLHLRKGLTEGRVSRTMSS*PPQAAA
Trigger: TGCAGCAGCCTGGGGTGGCCACGAGGACATTGTCCT...GCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGCCAAATTGGTCGGCATaGTTGGGATCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAEPNWSA*LGSAPC
Trigger: ACACGGTGCTGATCCCAATCATGCCGACCAATTTGG...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATTTGTCTGCAACTACATTTGCGGAAAGGGTTGACGGAGGGCAGAGTAAGCCCCCTTCCACCACATTaGAGCCTTCGTCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: SICLQLHLRKGLTEGRVSPLPPH*SLRPRS
Trigger: ACTCCGTGGACGAAGGCTGCAATGTGGTGGAAGGGG...GCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGATGCCCCATGGAAGCTaGAGCCAGAAGGGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMMPHGS*SQKGRP
Trigger: CGGACGCCCCTTCTGGCTGCAGCTTCCATGGGGCAT...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCATTCTGCTCCATCGTGTaGACAGGGGAAGGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHAFCSIV*TGEGEQ
Trigger: CTGCTCCCCTTCCCCTGTCCACACGATGGAGCAGAA...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp TTCAGACGCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCGCAGTGCCTCCTCTTaGTCCAGGCGGTGGAGGATG +
Preference number: 4 (lower is better)
Translates to: FRRLLLSCFTTCHTRVTDRSASS*SRRWRM
Trigger: CATCCTCCACCGCCTGGATCAAGAGGAGGCACTGCG...GTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGCGTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGTTGAGGAATCGGTGGCTCCTTGGTTaGATGTGTGGTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: AGELVPVSEVLDWFWLRNRWLLG*MCGPPQ
Trigger: CTGTGGTGGACCACACATGCAACCAAGGAGCCACCG...ATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTCCACCCTCATGGCAGTaGGTCCAAATTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: VYICIYSVWWRLLQHGGCPPSWQ*VQIGRH
Trigger: ATGCCGACCAATTTGGACGCACTGCCATGAGGGTGG...ACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCGACTGTGGAGGCTTCTaGTCCATCGTGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HTTTQKTINTEHCLCGDTDCGGF*SIVWTG
Trigger: CCCTGTCCACACGATGGAGCAGAAGCCTCCACAGTC...GGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTCATTTAGCTGGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAGCCGACGAGGGACTGTaGAGTGGCTGGACCCGAACA +
Preference number: 4 (lower is better)
Translates to: ISFSWRSRRQPVNDLGIRADEGL*SGWTRT
Trigger: TGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGC...TCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACAATGCCTTCTGTCTCATAGCATTGACATCTGCATaGCAAGCAATAAGTACCCGC +
Preference number: 4 (lower is better)
Translates to: ASIWQLSGSSNHNAFCLIALTSA*QAISTR
Trigger: GCGGGTACTTATTGCTTGCCATGCAGATGTCAATGC...TATGAGACAGAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CTGCTCCACATTCCTCCCTTAACCATGGCATCCAGACATCCTGTGTGCAATTGTTCACTGCTCTGCTGGTaGATGAGAAACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LLHIPPLTMASRHPVCNCSLLCW*MRNCGW
Trigger: CCAGCCGCAGTTTCTCATCCACCAGCAGAGCAGTGA...ACAATTGCACACAGGATGTCTGGATGCCATGGTTAAGGGAGGAATGTGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTCCAAATTGGTCGGCATaGTTGGGATCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: VYICIYSVWWRLLQHGGCPNWSA*LGSAPC
Trigger: ACACGGTGCTGATCCCAATCATGCCGACCAATTTGG...ACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGGGCAGCCTTACTGGGTAGGCACATGACAGTAAGTCAGGACACAGTACTGCGGCTTCTCATTGTCTGCTaGATTGACATCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: RAALLGRHMTVSQDTVLRLLIVC*IDICMA
Trigger: TGCCATGCAGATGTCAATGCAGCAGACAATGAGAAG...CCGCAGTACTGTGTCCTGACTTACTGTCATGTGCCTACCCAGTAAGGCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTCATTTAGCTGGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAGCCAAAGCCTGGCGATaGAGACCTCTCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ISFSWRSRRQPVNDLGIRAKAWR*RPLCRL
Trigger: CAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGC...TCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTGCCACCCCAGGCTGCTaGACGCAGAGCAGTTCGGCT +
Preference number: 4 (lower is better)
Translates to: LKTGFGCMEELQFTSAFIATPGC*TQSSSA
Trigger: AGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGC...AATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACCGCGTGCCCTTTGCTTaGAGGCACACAGAGCGCGGC +
Preference number: 4 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNRVPFA*RHTERG
Trigger: GCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCG...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTCACTGCTCTGCTGGTaGATGAGAAACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HTTTQKTINTEHCLCGDTSLLCW*MRNCGW
Trigger: CCAGCCGCAGTTTCTCATCCACCAGCAGAGCAGTGA...GGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACTTCATCCCCAGGAGTaGGAGCAGCACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHALHPQE*EQHTPF
Trigger: AAAAGGTGTGTGCTGCTCCCACTCCTGGGGATGAAG...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AAAATTCATCACAAAGTCATTTTTCACCTCCGTGTGGCATCAACACAGACACTCGAGGCTCTGCGGGGGTaGCTTCATCCCCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KIHHKVIFHLRVASTQTLEALRG*LHPQEW
Trigger: CCACTCCTGGGGATGAAGCCACCCCCGCAGAGCCTC...GAGTGTCTGTGTTGATGCCACACGGAGGTGAAAAATGACTTTGTGATGAATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 72 bp AGGGTTGACGGAGGGCAGAGTAAGCAAAACGAACAGTaGCATAGCCAAACAGCGGGAGAACTTGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RVDGGQSKQNEQ*HSQTAGELVPV
Trigger: GACAGGAACAAGTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTCAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTCATTGTCTGCTGCATTaGCATCTGCATGGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NKYGTLPLRRHLTVAHARHCLLH*HLHGKQ
Trigger: TTGCTTGCCATGCAGATGTCAATGCAGCAGACAATG...ACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACAACACACAAAGTGTCTaGGTCCTGGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TEGRVSKTNSCIAKQRENNTQSV*VLGFAE
Trigger: TTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTT...GTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTAACACACAAAGTGTCTaGGTCCTGGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NKYGTLPLRRHLTVAHARNTQSV*VLGFAE
Trigger: TTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTT...ACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACAATGCCTTCTGTCTCATATGCTGCATTGACATCTaGATGGCAAGCAATAAGTAC +
Preference number: 4 (lower is better)
Translates to: ASIWQLSGSSNHNAFCLICCIDI*MASNKY
Trigger: GTACTTATTGCTTGCCATGCAGATGTCAATGCAGCA...TATGAGACAGAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GGACTGAGTACACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGGACTGTGGAGGCTTCTaGTCCATCGTGTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: GLSTHHNAENNKYGTLPLDCGGF*SIVWTG
Trigger: CCCTGTCCACACGATGGAGCAGAAGCCTCCACAGTC...CAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTGTACTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GTATTCATTGTACACCATAGAGCACGGGTTTCCCGGTCCTCTTTTTCCCCAAACCTGATAGTCAGAGACTaGATCTTGGACGGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: VFIVHHRARVSRSSFSPNLIVRD*ILDGAD
Trigger: GTCGGCACCGTCCAAGATGCAGTCTCTGACTATCAG...GTTTGGGGAAAAAGAGGACCGGGAAACCCGTGCTCTATGGTGTACAATGAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AGCATGGGGGCTGTGCTGAGAAGGGCAGCCTTACTGGGTAGGCACATGACAGTATGGAGTTGTCTGACTTaGCTCCTTTATTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: SMGAVLRRAALLGRHMTVWSCLT*LLYLTL
Trigger: CAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCA...TACTGTCATGTGCCTACCCAGTAAGGCTGCCCTTCTCAGCACAGCCCCCATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCATTCTGCTCACTGCTCTaGTGGTGGATGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHAFCSLL*WWMRNC
Trigger: GCAGTTTCTCATCCACCAGCAGAGCAGTGAGCAGAA...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GGACTGAGTACACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCCCCTTCCACCACATTaGAGCCTTCGTCCACGGAGT +
Preference number: 4 (lower is better)
Translates to: GLSTHHNAENNKYGTLPLPLPPH*SLRPRS
Trigger: ACTCCGTGGACGAAGGCTGCAATGTGGTGGAAGGGG...CAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTGTACTCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCTTCGAGAGGCTGGGTGATGTCTaGTCCCCTTCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: AYFFHVSPHVIPGSLTFERLGDV*SPSTTL
Trigger: CAATGTGGTGGAAGGGGAGCAGACATCACCCAGCCT...CTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGCTAAGGACTGGGTTGTaGATGAGGGGGACACGACGG +
Preference number: 4 (lower is better)
Translates to: VWLYGGTAVYICIYSVWWLRTGL*MRGTRR
Trigger: CCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAG...CCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGCTAAGGACTGGGTTGTaGATGAGGGGGACACGACGG +
Preference number: 4 (lower is better)
Translates to: GLVVWRNCSLHLHLFGVVLRTGL*MRGTRR
Trigger: CCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAG...CACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGCTGTGTCCTAAGGACTaGGTTGTGGATGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMLCPKD*VVDEGD
Trigger: GTCCCCCTCATCCACAACCCAGTCCTTAGGACACAG...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GTATTCATTGTACACCATAGAGCACGGGTTTCCCGGTCCTCTTTTTCCCCAAACTGGAGGAGTCCACTTTaGCAGATCTGGGCTACCAGA +
Preference number: 4 (lower is better)
Translates to: VFIVHHRARVSRSSFSPNWRSPL*QIWATR
Trigger: TCTGGTAGCCCAGATCTGCCAAAGTGGACTCCTCCA...GTTTGGGGAAAAAGAGGACCGGGAAACCCGTGCTCTATGGTGTACAATGAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAATTTAAATGCTTCCGCTaGGTTCCTCTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: DGGQSKQNEQLHSQTAGEFKCFR*VPLTLS
Trigger: GGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAA...TTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACTGAAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAGTCCCCGAGAGGCTaGGTGATGTCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TEKHKARESFHKHSKCFSQSPRG*VMSAPL
Trigger: AAGGGGAGCAGACATCACCCAGCCTCTCGGGGACTG...AGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGTTGAGGAATCACTGTATGCGGCATTaGCCAGCAGAGTTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AGELVPVSEVLDWFWLRNHCMRH*PAEFSH
Trigger: ATGGGAGAACTCTGCTGGCCAATGCCGCATACAGTG...ATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTTGCTCTGCTGGTGGATaGGAAACTGCGGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: LKTGFGCMEELQFTSAFICSAGG*ETAAGH
Trigger: GTGCCCAGCCGCAGTTTCTCATCCACCAGCAGAGCA...AATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACCTGATCTGTATGATTaGTGTTGGCTCCACACCCAA +
Preference number: 4 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHAPDLYD*CWLHTQ
Trigger: TTGGGTGTGGAGCCAACATCAATCATACAGATCAGG...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGTTGAGGAATTTCTGCTCACTGCTCTaGTGGTGGATGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: AGELVPVSEVLDWFWLRNFCSLL*WWMRNC
Trigger: GCAGTTTCTCATCCACCAGCAGAGCAGTGAGCAGAA...ATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGGGCCGTCTTCCCACTaGCAGGCCCTCCTACCAGCA +
Preference number: 4 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKGPSSH*QALLPA
Trigger: TGCTGGTAGGAGGGCCTGGCAGTGGGAAGACGGCCC...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATGCCAAAGCCTGGCGATaGAGACCTCTCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHAKAWR*RPLCRL
Trigger: CAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGC...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGGTGACAGCTCTGCTCTaGTTTCGGGCAGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VWLYGGTAVYICIYSVWWVTALL*FRAEQR
Trigger: TCTCTGCTCTGCCCGAAAGCAGAGCAGAGCTGTCAC...CCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TGCCTTCCAAGAGTCCTGTTAAGTGTCATTAATCAATGTCCCATAGGGACAAGACTCACGACTGACGCGTaGCCTTTGCTTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CLPRVLLSVINQCPIGTRLTTDA*PLLAGT
Trigger: TGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAG...TCTTGTCCCTATGGGACATTGATTAATGACACTTAACAGGACTCTTGGAAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGTGGCTGCCACCCTCATaGCAGTGCGTCCAAATTGGT +
Preference number: 4 (lower is better)
Translates to: GLVVWRNCSLHLHLFGVVWLPPS*QCVQIG
Trigger: ACCAATTTGGACGCACTGCCATGAGGGTGGCAGCCA...CACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGTGTCCTAAGGACTaGGTTGTGGATGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: WLYGGTAVYICIYSVWWRLCPKD*VVDEGD
Trigger: GTCCCCCTCATCCACAACCCAGTCCTTAGGACACAG...TCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTCTACTGGGAGAATTATaGCTGTGTCCTAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VYICIYSVWWRLLQHGGCLLGEL*LCPKDW
Trigger: CCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAG...ACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATTCAGAGCCCTCAATCTaGAGCTTCAGGGCTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ENNKYGTLPLRRHLTVAHSEPSI*SFRACL
Trigger: CAAACAAGCCCTGAAGCTCCAGATTGAGGGCTCTGA...ATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGTGGGCTTTGCAGAAGTaGAAAGCCAAAGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: TDDTQEMSLADTEKHKARWALQK*KAKAWR
Trigger: TCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCA...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAAAAAGTGTCTGAGTCCTaGGCTTTGCAGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: DGGQSKQNEQLHSQTAGEKVSES*ALQKWK
Trigger: TTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTT...TTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGCTTCATCCCCAGGAGTaGGAGCAGCACACACCTTTT +
Preference number: 4 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMLHPQE*EQHTPF
Trigger: AAAAGGTGTGTGCTGCTCCCACTCCTGGGGATGAAG...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATTGCAAGCAATCAGTCCCCGAGAGGCTaGGTGATGTCTGCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: FHKHSKCFSQRESRIASNQSPRG*VMSAPL
Trigger: AAGGGGAGCAGACATCACCCAGCCTCTCGGGGACTG...ATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GACGGAGGGCAGAGTAAGCAAAACGAACAGTTGCATAGCCAAACAGCGGGAGAATCGGCCATTGTCAGCTaGTTTTCTAAGGCCAATATG +
Preference number: 4 (lower is better)
Translates to: DGGQSKQNEQLHSQTAGESAIVS*FSKANM
Trigger: CATATTGGCCTTAGAAAACCAGCTGACAATGGCCGA...TTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTTGCTTACTCTGCCCTCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp CACAACGCAGAAAACAATAAATACGGAACACTGCCTTaGCGGAGACACCTGACCGTGGCACATGCACGTTTA +
Preference number: 4 (lower is better)
Translates to: HNAENNKYGTLP*RRHLTVAHARL
Trigger: TAAACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp TTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGGCTGGATCTGCTCCGTaGATGACAGGCTATGGAAAC +
Preference number: 4 (lower is better)
Translates to: LVVWRNCSLHLHLFGVVEAGSAP*MTGYGN
Trigger: GTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGC...CTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGCTTCAGGGCTTGTTTaGGGTTCAGCTCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGASGLV*GSALSP
Trigger: CGGAGACAGAGCTGAACCTCAAACAAGCCCTGAAGC...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GAGAATGTCCAAGCTTCAGGAATGATGGTCCATCTATTTGCAGGTGGGATGACATTTCCTTCTTGTAGTTaGAGCTGGGGTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ENVQASGMMVHLFAGGMTFPSCS*SWGQSP
Trigger: AGGGCTCTGACCCCAGCTTCAACTACAAGAAGGAAA...TGTCATCCCACCTGCAAATAGATGGACCATCATTCCTGAAGCTTGGACATTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGTGGACAGGGAGTCTTTaGCTGGGGTACCATTCCATA +
Preference number: 4 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMWTGSL*LGYHSI
Trigger: TATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCA...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGACCATTCCTCCTCTTCTaGTCACTGCTCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGPFLLF*SLLCWW
Trigger: CCACCAGCAGAGCAGTGAGCAGAAGAGGAGGAATGG...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACTTGTGATAGACAGCACACTGTACATTCAAAGAACATCCATTCCACCAAGCCACCATTCCTCCTCTTCTaGTCACTGCTCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: TCDRQHTVHSKNIHSTKPPFLLF*SLLCWW
Trigger: CCACCAGCAGAGCAGTGAGCAGAAGAGGAGGAATGG...TGGCTTGGTGGAATGGATGTTCTTTGAATGTACAGTGTGCTGTCTATCACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACTGAAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTAGGCTGGGTGATGTCTaGTCCCCTTCCACCACATTG +
Preference number: 4 (lower is better)
Translates to: TEKHKARESFHKHSKCFSRLGDV*SPSTTL
Trigger: CAATGTGGTGGAAGGGGAGCAGACATCACCCAGCCT...AGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGAGAAACAGGATCTTGGTaGTGCCCAAGCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: WLYGGTAVYICIYSVWWRETGSW*CPSHPP
Trigger: TGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTC...TCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTCATTTAGCTGGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAAGCTGCAGGACCTCTTaGTCCTTGGGTATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: ISFSWRSRRQPVNDLGIRSCRTS*SLGIKV
Trigger: CACCTTGATACCCAAGGAGCAAGAGGTCCTGCAGCT...TCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATCACAAAGTCATTTTTCACCTCCGTGTGGCATCAACACAGACACTCGTTTTTACTCGTGGTTTACCTCTaGGCCATGGTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: ITKSFFTSVWHQHRHSFLLVVYL*AMVQQV
Trigger: CACCTGCTGGACCATGGCGCAGAGGTAAACCACGAG...TAAAAACGAGTGTCTGTGTTGATGCCACACGGAGGTGAAAAATGACTTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp GTGGGACCGTTTCTTATCTTTGTAATAGAGAAGTCATTGTTTTTCCCAGTTGTGTTGACCACGGACGCATaGCCCATGGAAGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGPFLIFVIEKSLFFPVVLTTDA*PMEAAA
Trigger: GGCTGCAGCTTCCATGGGGCATGCGTCCGTGGTCAA...CACAACTGGGAAAAACAATGACTTCTCTATTACAAAGATAAGAAACGGTCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACTGCACCACTTTGACATaGCCCTGCCAGGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNCTTLT*PCQAAD
Trigger: GTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCA...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AGCCTGACACAGACGGTCCTTGATTGGGAAAATGGAGATTTAAACTACCCGAGTACACTGAGATTCAGCTaGCGTCTGTTTAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SLTQTVLDWENGDLNYPSTLRFS*RLFRWA
Trigger: AGCCCACCTAAACAGACGCCAGCTGAATCTCAGTGT...ACTCGGGTAGTTTAAATCTCCATTTTCCCAATCAAGGACCGTCTGTGTCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCACGTTTGGTCCACACAGCATaGTATAATTCTGTCATGGTC +
Preference number: 4 (lower is better)
Translates to: NKYGTLPLRRHLTVAHARLVHTA*YNSVMV
Trigger: GACCATGACAGAATTATACCATGCTGTGTGGACCAA...ACGTGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp ATTTCATTTAGCTGGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAGATCTGCTCCGTGAATaGCAGGCTATGGAAACTGTC +
Preference number: 4 (lower is better)
Translates to: ISFSWRSRRQPVNDLGIRDLLRE*QAMETV
Trigger: GACAGTTTCCATAGCCTGTCATTCACGGAGCAGATC...TCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCAGTGCCGAAGCTATGCTaGGAACTGTTCTGCCTTCGC +
Preference number: 4 (lower is better)
Translates to: KILKTGFGCMEELQFTSAVPKLC*ELFCLR
Trigger: GCGAAGGCAGAACAGTTCTCAGCATAGCTTCGGCAC...TGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCCTTCTCATTGTCTGCTaGATTGACATCTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: HTTTQKTINTEHCLCGDTLLIVC*IDICMA
Trigger: TGCCATGCAGATGTCAATGCAGCAGACAATGAGAAG...GGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCACCACCCTCATGGCAGTaGGTCCAAATTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: KILKTGFGCMEELQFTSAPPSWQ*VQIGRH
Trigger: ATGCCGACCAATTTGGACGCACTGCCATGAGGGTGG...TGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGTCGTCTGGGCCATTTTaGAGACTTTCTCTTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TDDTQEMSLADTEKHKARSSGPF*RLSLPK
Trigger: CTTGGGAAGAGAAAGTCTGCAAAATGGCCCAGACGA...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS-3UTR GCA 90 bp CCATGGCATCCAGACATCCTGTGTGCAATTGTGCAAAGAAGAAAACAGGAAAGAAGAGGACGTCTAGCTTaGGCTGAAAGTCTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PWHPDILCAIVQRRKQERRGRLA*AESLPR
Trigger: CCTTGGAAGACTTTCAGCGCAAGCTAGACGTCCTCT...TCTTTCCTGTTTTCTTCTTTGCACAATTGCACACAGGATGTCTGGATGCCATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACTGGCTGCCACCCTCATaGCAGTGCGTCCAAATTGGT +
Preference number: 4 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNWLPPS*QCVQIG
Trigger: ACCAATTTGGACGCACTGCCATGAGGGTGGCAGCCA...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCCGACCCAGACTTGCTaGAGTTGTCTGACTTGCCTC +
Preference number: 4 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHPTQTC*SCLTCL
Trigger: GAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGG...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTGGCTCGAGGAGACTTTaGACGGCTGGATCTCTTAGC +
Preference number: 4 (lower is better)
Translates to: NTQNRVWLYGGTAVYICIGSRRL*TAGSLS
Trigger: GCTAAGAGATCCAGCCGTCCAAAGTCTCCTCGAGCC...AATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATGAGAAGCAGGAGCCATaGGGGAAAGAACTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHEKQEP*GKELVV
Trigger: CACCACGAGTTCTTTCCCCCATGGCTCCTGCTTCTC...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TCCCCTAACATCTGTTCCACACTTATAAAGATGGACACAAAGACACTTGGAAACGGCAGGTGTAGCTCATaGCCAGCATCCTGTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPNICSTLIKMDTKTLGNGRCSS*PASCVL
Trigger: AAGGACACAGGATGCTGGCCATGAGCTACACCTGCC...GTTTCCAAGTGTCTTTGTGTCCATCTTTATAAGTGTGGAACAGATGTTAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp ACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTaGTCTGCAACTACATTTGCGGAAAGGGTTGACGGA +
Preference number: 4 (lower is better)
Translates to: TPHTERTTERKH*SATTFAERVDG
Trigger: TCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGTGAATGACAGGCTATaGAAACTGTCAATGGGCACC +
Preference number: 4 (lower is better)
Translates to: GLVVWRNCSLHLHLFGVVVNDRL*KLSMGT
Trigger: GGTGCCCATTGACAGTTTCCATAGCCTGTCATTCAC...CACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATGGCTACTCCCAGACTTaGCAACAGGTCCCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHGYSQT*QQVPFC
Trigger: ACAAAAGGGGACCTGTTGCCAAGTCTGGGAGTAGCC...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp CTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTTGGGCTTTGCAGAAGTaGAAAGCCAAAGCCTGGCGA +
Preference number: 4 (lower is better)
Translates to: LKTGFGCMEELQFTSAFIWALQK*KAKAWR
Trigger: TCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCA...AATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp AAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAAATGGAGGAGTCCACTTTaGCAGATCTGGGCTACCAGA +
Preference number: 4 (lower is better)
Translates to: KSTRQGKASTNTQSVSLKWRSPL*QIWATR
Trigger: TCTGGTAGCCCAGATCTGCCAAAGTGGACTCCTCCA...TTTGAGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGATCACGTTCAGAATaGGCTGAACTTTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMGSRSE*AELWQT
Trigger: AGTTTGCCAAAGTTCAGCCCATTCTGAACGTGATCC...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATTGCAAGCAATCATCCACCAAGAGCTTaGAGAGGACGTCTAGCTTGC +
Preference number: 4 (lower is better)
Translates to: FHKHSKCFSQRESRIASNHPPRA*RGRLAC
Trigger: GCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATG...ATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp TTGACTTGTCAGCATCAACCACCTGTCACCTTAAATTaGAGTGAGTTCATCAGCTGTCCCTCATCCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LTCQHQPPVTLN*SEFISCPSSWV
Trigger: TACCCAGGATGAGGGACAGCTGATGAACTCACTCAAATTTAAGGTGACAGGTGGTTGATGCTGACAAGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 72 bp AAAACGAACAGTTGCATAGCCAAACAGCGGGAGAACTaGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: KTNSCIAKQREN*FLSLKYWTGFG
Trigger: ACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGCTGTTTGGCTATGCAACTGTTCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp AAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAAAGCTGCTGTCCTGAGATaGAGGGACCACGATTTTACA +
Preference number: 4 (lower is better)
Translates to: KSTRQGKASTNTQSVSLKAAVLR*RDHDFT
Trigger: TGTAAAATCGTGGTCCCTTCATCTCAGGACAGCAGC...TTTGAGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCAGCCGACCCAGACTTaGTGGAGTTGTCTGACTTGC +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFQPTQT*WSCLTC
Trigger: GCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTGTGACAGCTCTGCTCTaGTTTCGGGCAGAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFVTALL*FRAEQR
Trigger: TCTCTGCTCTGCCCGAAAGCAGAGCAGAGCTGTCAC...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GTATTCATTGTACACCATAGAGCACGGGTTTCCCGGTCCTCTTTTTCCCCAAACATTCAAACTCACTACTaGGAGAATTATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VFIVHHRARVSRSSFSPNIQTHY*ENYGCV
Trigger: GACACAGCCATAATTCTCCCAGTAGTGAGTTTGAAT...GTTTGGGGAAAAAGAGGACCGGGAAACCCGTGCTCTATGGTGTACAATGAATAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATACACTGAGATTCAGCTaGCGTCTGTTTAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHTLRFS*RLFRWA
Trigger: AGCCCACCTAAACAGACGCCAGCTGAATCTCAGTGT...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATTGCAAGCAATTGCAGCAGACTCGTCTaGGCCATTTTGCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: FHKHSKCFSQRESRIASNCSRLV*AILQTF
Trigger: GAAAGTCTGCAAAATGGCCCAGACGAGTCTGCTGCA...ATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS-3UTR CCA 90 bp TTCAGACGCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACAAAGTGTCTGAGTCCTaGGCTTTGCAGAAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: FRRLLLSCFTTCHTRVTDKVSES*ALQKWK
Trigger: TTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTT...GTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGCGTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACTTGTGATAGACAGCACACTGTACATTCAAAGAACATCCATTCCACCAAGCCATTCACATCAGCCCCATaGCTAAAGAGTAACTCCACG +
Preference number: 4 (lower is better)
Translates to: TCDRQHTVHSKNIHSTKPFTSAP*LKSNST
Trigger: CGTGGAGTTACTCTTTAGCCATGGGGCTGATGTGAA...TGGCTTGGTGGAATGGATGTTCTTTGAATGTACAGTGTGCTGTCTATCACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CGTGGCACATGCACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTGGTTGCCCCTTTTGTCAAACTaGGTCATTTCATACTCTAGA +
Preference number: 4 (lower is better)
Translates to: RGTCTFTKWENTQNRVWLPLLSN*VISYSR
Trigger: TCTAGAGTATGAAATGACTCAGTTTGACAAAAGGGG...CAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAATCGGCAAAGCTGTGGTaGAACAGGATCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKSAKLW*NRILVL
Trigger: CAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGA...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp TTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATTGCAAGCAATTGGAATCACACTGATTaGCAGAGGCTCCGTTATCCA +
Preference number: 4 (lower is better)
Translates to: FHKHSKCFSQRESRIASNWNHTD*QRLRYP
Trigger: TGGATAACGGAGCCTCTGTCAATCAGTGTGATTCCA...ATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp CTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTGCGCTTCTCATTGTCTaGTGCATTGACATCTGCATG +
Preference number: 4 (lower is better)
Translates to: LKTGFGCMEELQFTSAFIALLIV*CIDICM
Trigger: CATGCAGATGTCAATGCAGCAGACAATGAGAAGCGC...AATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGATCTGCAGATGGTAATTaGGGTTCGTCATTATCCCAT +
Preference number: 4 (lower is better)
Translates to: WLYGGTAVYICIYSVWWRSADGN*GSSLSH
Trigger: ATGGGATAATGACGAACCCCAATTACCATCTGCAGA...TCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGACTGAGTACACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGTCTGCAGATGGTAATTaGGGTTCGTCATTATCCCAT +
Preference number: 4 (lower is better)
Translates to: GLSTHHNAENNKYGTLPLSADGN*GSSLSH
Trigger: ATGGGATAATGACGAACCCCAATTACCATCTGCAGA...CAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTGTACTCAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATCACAAAGTCATTTTTCACCTCCGTGTGGCATCAACACAGACACTCGTTTTTATTTAAATGCTTCCGCTaGGTTCCTCTCACACTCTCC +
Preference number: 4 (lower is better)
Translates to: ITKSFFTSVWHQHRHSFLFKCFR*VPLTLS
Trigger: GGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAA...TAAAAACGAGTGTCTGTGTTGATGCCACACGGAGGTGAAAAATGACTTTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGACAGGGAGTCTTTGACTaGGGTACCATTCCATATCAT +
Preference number: 4 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGQGVFD*GTIPYH
Trigger: ATGATATGGAATGGTACCCCAGTCAAAGACTCCCTG...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCTGAGTCCTGGGCTTTaGAGAAGTGGAAAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFLSPGL*RSGKPK
Trigger: CTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp AAAAGCACAAGGCAAGGGAAAGCTTCCACAAACACTCAAAGTGTTTCTCTCAAACTCCTCCAACCACAATaGCTTCTGTCTCATACAACT +
Preference number: 4 (lower is better)
Translates to: KSTRQGKASTNTQSVSLKLLQPQ*LLSHTT
Trigger: AGTTGTATGAGACAGAAGGCATTGTGGTTGGAGGAG...TTTGAGAGAAACACTTTGAGTGTTTGTGGAAGCTTTCCCTTGCCTTGTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS-3UTR GCA 90 bp AATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTCGGCTGGCTCCAGCTaGAAGTTTGAATTAATCAAG +
Preference number: 4 (lower is better)
Translates to: NTQNRVWLYGGTAVYICISAGSS*KFELIK
Trigger: CTTGATTAATTCAAACTTGCAGCTGGAGCCAGCCGA...AATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp GGACTGAGTACACACCACAACGCAGAAAACAATAAATACGGAACACTGCCTTTGATTCAAACTCACTACTaGGAGAATTATGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: GLSTHHNAENNKYGTLPLIQTHY*ENYGCV
Trigger: GACACAGCCATAATTCTCCCAGTAGTGAGTTTGAAT...CAAAGGCAGTGTTCCGTATTTATTGTTTTCTGCGTTGTGGTGTGTACTCAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ACTTGTGATAGACAGCACACTGTACATTCAAAGAACATCCATTCCACCAAGCCAGAATGGGCTGAACTTTaGCAAACTGTTTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: TCDRQHTVHSKNIHSTKPEWAEL*QTVFGQ
Trigger: TTGTCCGAAAACAGTTTGCCAAAGTTCAGCCCATTC...TGGCTTGGTGGAATGGATGTTCTTTGAATGTACAGTGTGCTGTCTATCACAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp CACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTaGGTTGTATGGAGGAACTGCAGTTTACATCTGCAT +
Preference number: 4 (lower is better)
Translates to: HVYQMGKYSKPG*VVWRNCSLHLH
Trigger: ATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 72 bp AACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATaGCAAGCAATTACGCATCTGAGCTTCCACAAAACA +
Preference number: 4 (lower is better)
Translates to: NTQSVSLKESHA*QAITHLSFHKT
Trigger: TGTTTTGTGGAAGCTCAGATGCGTAATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR TCA 90 bp CAATGTCCCATAGGGACAAGAATTCAATCCTTGAAACATTCACATTTGACTTGTCCATTGGAATCACACTaGTTGACAGAGGCTCCGTTA +
Preference number: 4 (lower is better)
Translates to: QCPIGTRIQSLKHSHLTCPLESH*LTEAPL
Trigger: TAACGGAGCCTCTGTCAATCAGTGTGATTCCAATGG...ACAAGTCAAATGTGAATGTTTCAAGGATTGAATTCTTGTCCCTATGGGACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTTGTTCCAGCAAAACCTaGACTACATCCACATGTCCC +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFCSSKT*TTSTCP
Trigger: GGGACATGTGGATGTAGTGCAGGTTTTGCTGGAACA...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCACACACCTTTTAAATaGTTCCGCTGGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFHTPFK*FRWVPL
Trigger: GAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAACTACTGGGAGAATTATaGCTGTGTCCTAAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKLLGEL*LCPKDW
Trigger: CCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAG...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCTAAGTCGGCTCCCCTaGAGACAAGCAAATTCACAA +
Preference number: 4 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFLSRLP*RQANSQ
Trigger: TTGTGAATTTGCTTGTCTCCAGGGGAGCCGACTTAG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CCA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGTTTTCAGAGAATTGTTaGACAGGGATGACTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SMYILGYLHTPHRANNRKFSENC*TGMTFA
Trigger: GGCAAAAGTCATCCCTGTCCAACAATTCTCTGAAAA...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp TGGAAACACAACTCCCTAATGCCTTGTCTTTGCCCTTaGGTCACAAGGTGCAACTTTCAAAGTAATAAAATT +
Preference number: 4 (lower is better)
Translates to: WKHNSLMPCLCP*VTRCNFQSNKI
Trigger: AATTTTATTACTTTGAAAGTTGCACCTTGTGACCAAAGGGCAAAGACAAGGCATTAGGGAGTTGTGTTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR GCA 90 bp TTCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAATGGAGTTGTCTGACTTaGCTCCTTTATTTGACTTTG +
Preference number: 4 (lower is better)
Translates to: FNVHFRLFTHPTQSEQQKWSCLT*LLYLTL
Trigger: CAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCA...TTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
3UTR CAA 72 bp TTTACCAAATGGGAAAATACTCAAAACCGGGTTTGGTaGTATGGAGGAACTGCAGTTTACATCTGCATTTAT +
Preference number: 4 (lower is better)
Translates to: FTKWENTQNRVW*YGGTAVYICIY
Trigger: ATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000094300.4
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 72 bp GACAAGAATTCAATCCTTGAAACATTCACATTTGACTaGTCAGCATCAACCACCTGTCACCTTAAATTTGAG +
Preference number: 4 (lower is better)
Translates to: DKNSILETFTFD*SASTTCHLKFE
Trigger: CTCAAATTTAAGGTGACAGGTGGTTGATGCTGACAAGTCAAATGTGAATGTTTCAAGGATTGAATTCTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
3UTR CAA 72 bp ATAGGGACAAGAATTCAATCCTTGAAACATTCACATTaGACTTGTCAGCATCAACCACCTGTCACCTTAAAT +
Preference number: 4 (lower is better)
Translates to: IGTRIQSLKHSH*TCQHQPPVTLN
Trigger: ATTTAAGGTGACAGGTGGTTGATGCTGACAAGTCAAATGTGAATGTTTCAAGGATTGAATTCTTGTCCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 90 bp GCGAACTTGGCCACAGGAGCTCAGTGCACAGGGCCGTCTTCCCACTaGCAGGCCCTCCTACCAGCAACACGCCCCAGGAGGCCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ANLATGAQCTGPSSH*QALLPATRPRRPPF
Trigger: GAAAGGGGGCCTCCTGGGGCGTGTTGCTGGTAGGAGGGCCTGGCAGTGGGAAGACGGCCCTGTGCACTGAGCTCCTGTGGCCAAGTTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 90 bp GACCTCTCTGCAGGCTGGCGGGCGAACTTGGCCACAGGAGCTCAGTaGACAGGGCCGTCTTCCCACTGCCAGGCCCTCCTACCAGCAACA +
Preference number: 5 (lower is better)
Translates to: DLSAGWRANLATGAQ*TGPSSHCQALLPAT
Trigger: TGTTGCTGGTAGGAGGGCCTGGCAGTGGGAAGACGGCCCTGTGCACTGAGCTCCTGTGGCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 90 bp CAGCCCCTCGATCAATCAGGAGGCTCACGACTGACGCGTGCCCTTTaGTTGCAGGCACACAGAGCGCGGCCACGGAGAGGGCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: QPLDQSGGSRLTRAL*LQAHRARPRRGLSC
Trigger: GCAGGACAGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CTTTGCTTGCAGGCACACAGAGCGCGGCCACGGAGAGGGCTGTCCTaGCGTCCACGTCCTCGTGGTTTACCTCTGCGCCATGGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: LCLQAHRARPRRGLS*RPRPRGLPLRHGPA
Trigger: TGCTGGACCATGGCGCAGAGGTAAACCACGAGGACGTGGACGGCAGGACAGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TCCACGGCTGCGCCCCAGAACAGAAGCGTGTTGACCACGGACGCATaGCCCATGGAAGCTGCAGCCAGAAGGGGCGTCCGCCCGTTGTTA +
Preference number: 5 (lower is better)
Translates to: STAAPQNRSVLTTDA*PMEAAARRGVRPLL
Trigger: TAACAACGGGCGGACGCCCCTTCTGGCTGCAGCTTCCATGGGGCATGCGTCCGTGGTCAACACGCTTCTGTTCTGGGGCGCAGCCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCGAGGGCGGTGGCTCCTaGGTTGCATGTGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: TAGGSQSQQHALRHLASIEGGGS*VACVVH
Trigger: GTGGACCACACATGCAACCAAGGAGCCACCGCCCTC...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp TCTACCTCAGCCCCTCGATCAATCAGGAGGCTCACGACTGACGCGTaGCCTTTGCTTGCAGGCACACAGAGCGCGGCCACGGAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: STSAPRSIRRLTTDA*PLLAGTQSAATERA
Trigger: AGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGCTGAGGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCGCGGTGGCTCCTTGGTaGCATGTGTGGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: TAGGSQSQQHALRHLASIAVAPW*HVWSTT
Trigger: TGTGGTGGACCACACATGCAACCAAGGAGCCACCGC...GATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp CTGTGTCCTAAGGACTGGGTTGTGGATGAGGGGGACACGACGGACTaGCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTGGATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: LCPKDWVVDEGDTTD*LLLLRGSECCWICS
Trigger: GGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp CCTCCTGATGCCCTCGCTCCTGCACGGTTCGAGGGACGGAGACCCTaGCCAGGAACACCTGGTTGCTCTGCAGATGGTAATTGGGGTTCG +
Preference number: 5 (lower is better)
Translates to: PPDALAPARFEGRRP*PGTPGCSADGNWGS
Trigger: CGAACCCCAATTACCATCTGCAGAGCAACCAGGTGTTCCTGGGCAGGGTCTCCGTCCCTCGAACCGTGCAGGAGCGAGGGCATCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp GCCACCCCAGGCTGCTGCACGCAGAGCAGTTCGGCTGTCTGCATCTaGACAGTCTACCTTTACGCCAGCGTAAAGCAGGGCCGACACCAC +
Preference number: 5 (lower is better)
Translates to: ATPGCCTQSSSAVCI*TVYLYASVKQGRHH
Trigger: GTGGTGTCGGCCCTGCTTTACGCTGGCGTAAAGGTAGACTGTGCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CTCGTGGCCACCCCAGGCTGCTGCACGCAGAGCAGTTCGGCTGTCTaGATCTGCACAGTCTACCTTTACGCCAGCGTAAAGCAGGGCCGA +
Preference number: 5 (lower is better)
Translates to: LVATPGCCTQSSSAV*ICTVYLYASVKQGR
Trigger: TCGGCCCTGCTTTACGCTGGCGTAAAGGTAGACTGTGCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CACGGAGAGGGCTGTCCTGCCGTCCACGTCCTCGTGGTTTACCTCTaGGCCATGGTCCAGCAGGTGCTCTACGATCTCTCTGTGGCCCAT +
Preference number: 5 (lower is better)
Translates to: HGEGCPAVHVLVVYL*AMVQQVLYDLSVAH
Trigger: ATGGGCCACAGAGAGATCGTAGAGCACCTGCTGGACCATGGCGCAGAGGTAAACCACGAGGACGTGGACGGCAGGACAGCCCTCTCCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp ACAGTGATCTACCTCAGCCCCTCGATCAATCAGGAGGCTCACGACTaGCGCGTGCCCTTTGCTTGCAGGCACACAGAGCGCGGCCACGGA +
Preference number: 5 (lower is better)
Translates to: TVIYLSPSINQEAHD*RVPFACRHTERGHG
Trigger: TCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGCTGAGGTAGATCACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTTGGTTaGATGTGTGGTCCACCACAGCGCCATGCTCTATCAGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: HVPPGLRCRGRWLLG*MCGPPQRHALSEAA
Trigger: TGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp TCTGAGTCCTGGGCTTTGCAGAAGTGGAAAGCCAAAGCCTGGCGATaGAGACCTCTCTGCAGGCTGGCGGGCGAACTTGGCCACAGGAGC +
Preference number: 5 (lower is better)
Translates to: SESWALQKWKAKAWR*RPLCRLAGELGHRS
Trigger: GCTCCTGTGGCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 90 bp TCCACATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTTaGTTGCATGTGTGGTCCACCACAGCGCCATGCTCTATCAGAAGC +
Preference number: 5 (lower is better)
Translates to: STCPSWAAMQRAVAP*LHVWSTTAPCSIRS
Trigger: GCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp GCACTACATCCACATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTaGCTCCTTGGTTGCATGTGTGGTCCACCACAGCGCCATGCTCTA +
Preference number: 5 (lower is better)
Translates to: ALHPHVPPGLRCRGR*LLGCMCGPPQRHAL
Trigger: TAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGATGTAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGGGCAGTGCGTCCAAATaGGTCGGCATGATTGGGATC +
Preference number: 5 (lower is better)
Translates to: GGSQSQQHALRHLASIWQGSASK*VGMIGI
Trigger: GATCCCAATCATGCCGACCAATTTGGACGCACTGCC...CTGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 90 bp GCCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTGGATCTGCTCCGTaGATGACAGGCTATGGAAACTGTCAATGGGCACCGTCTGAGCCG +
Preference number: 5 (lower is better)
Translates to: ACSCCEAVSAAGSAP*MTGYGNCQWAPSEP
Trigger: CGGCTCAGACGGTGCCCATTGACAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp AGGGCGGTGGCTCCTTGGTTGCATGTGTGGTCCACCACAGCGCCATaGTCTATCAGAAGCTGCACCACTTTGACATGGCCCTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: RAVAPWLHVWSTTAP*SIRSCTTLTWPCQA
Trigger: AGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp CCAGCAAAACCTGCACTACATCCACATGTCCCTCCTGGGCTGCGATaGAGAGGGCGGTGGCTCCTTGGTTGCATGTGTGGTCCACCACAG +
Preference number: 5 (lower is better)
Translates to: PAKPALHPHVPPGLR*RGRWLLGCMCGPPQ
Trigger: CTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGATGTAGTGCAGGTTTTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp CTGGTTCAGCGTCTCAGCCGTCTCCTTGGTGAGGTGCTGCCGCAGTaGCTCCTCTTGATCCAGGCGGTGGAGGATGTACTGCTGAACATC +
Preference number: 5 (lower is better)
Translates to: LVQRLSRLLGEVLPQ*LLLIQAVEDVLLNI
Trigger: GATGTTCAGCAGTACATCCTCCACCGCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTCACCAAGGAGACGGCTGAGACGCTGAACCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TCCAGCACGCGCTCCAGATACAGGAAGCACCCACTGCTCTTGATGTaGAGCTGGTTCAGCGTCTCAGCCGTCTCCTTGGTGAGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSTRSRYRKHPLLLM*SWFSVSAVSLVRCC
Trigger: GCAGCACCTCACCAAGGAGACGGCTGAGACGCTGAACCAGCTGCACATCAAGAGCAGTGGGTGCTTCCTGTATCTGGAGCGCGTGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp TCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTTGGTTGCATGTGTaGTCCACCACAGCGCCATGCTCTATCAGAAGCTGCACCACTTTG +
Preference number: 5 (lower is better)
Translates to: SWAAMQRAVAPWLHV*STTAPCSIRSCTTL
Trigger: CAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp GTTGGACCTGATAGTCAGAGACTGCATCTTGGACGGTGCCGACTGTaGAGGCTTCTGCTCCATCGTGTGGACAGGGGAAGGGGAGCAGCC +
Preference number: 5 (lower is better)
Translates to: VGPDSQRLHLGRCRL*RLLLHRVDRGRGAA
Trigger: GGCTGCTCCCCTTCCCCTGTCCACACGATGGAGCAGAAGCCTCCACAGTCGGCACCGTCCAAGATGCAGTCTCTGACTATCAGGTCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp TTGACCTCGGCACCATGTTGTAGCAGGTTCAGGACAATGTCCTCGTaGCCACCCCAGGCTGCTGCACGCAGAGCAGTTCGGCTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: LTSAPCCSRFRTMSS*PPQAAARRAVRLSA
Trigger: TGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCACGAGGACATTGTCCTGAACCTGCTACAACATGGTGCCGAGGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp TCAAAAGCTGCCATGTGTAGAGGCGTCCAGCCAGCATCGTCTCGGTaGCTCTCGTCCAAGCCTCTGTCCAAGAGAGTGCGCACCACCTCC +
Preference number: 5 (lower is better)
Translates to: SKAAMCRGVQPASSR*LSSKPLSKRVRTTS
Trigger: GGAGGTGGTGCGCACTCTCTTGGACAGAGGCTTGGACGAGAGCCACCGAGACGATGCTGGCTGGACGCCTCTACACATGGCAGCTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp TTGACATCTGCATGGCAAGCAATAAGTACCCGCACCATCTCCACGTaGCCCTGCCAGCAGGAGACGTGCAGCGCTGTCCTTCCCTCCGCA +
Preference number: 5 (lower is better)
Translates to: LTSAWQAISTRTIST*PCQQETCSAVLPSA
Trigger: TGCGGAGGGAAGGACAGCGCTGCACGTCTCCTGCTGGCAGGGTCACGTGGAGATGGTGCGGGTACTTATTGCTTGCCATGCAGATGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 90 bp TGTGGTCCACCACAGCGCCATGCTCTATCAGAAGCTGCACCACTTTaGCATGGCCCTGCCAGGCTGCAGACTGCAAGGCTGAGCGCTTCT +
Preference number: 5 (lower is better)
Translates to: CGPPQRHALSEAAPL*HGPARLQTARLSAS
Trigger: AGAAGCGCTCAGCCTTGCAGTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp GTGTTCCAGCAAAACCTGCACTACATCCACATGTCCCTCCTGGGCTaGGATGCAGAGGGCGGTGGCTCCTTGGTTGCATGTGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: VFQQNLHYIHMSLLG*DAEGGGSLVACVVH
Trigger: GTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGATGTAGTGCAGGTTTTGCTGGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp ACGGACTGCCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTGGATCTaGTCCGTGAATGACAGGCTATGGAAACTGTCAATGGGCACCGTC +
Preference number: 5 (lower is better)
Translates to: TDCLLLLRGSECCWI*SVNDRLWKLSMGTV
Trigger: GACGGTGCCCATTGACAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp GACACGACGGACTGCCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTaGATCTGCTCCGTGAATGACAGGCTATGGAAACTGTCAATGGGC +
Preference number: 5 (lower is better)
Translates to: DTTDCLLLLRGSECC*ICSVNDRLWKLSMG
Trigger: GCCCATTGACAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGTCGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp GACAGCTCTGCTCTGCTTTCGGGCAGAGCAGAGAAGCAGGAGCCATaGGGGAAAGAACTCGTGGTGACCAGCCAAGAGCTCTGCCACAGT +
Preference number: 5 (lower is better)
Translates to: DSSALLSGRAEKQEP*GKELVVTSQELCHS
Trigger: ACTGTGGCAGAGCTCTTGGCTGGTCACCACGAGTTCTTTCCCCCATGGCTCCTGCTTCTCTGCTCTGCCCGAAAGCAGAGCAGAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 90 bp GTGCTTCCAGCGGGGTCAGGTTCCGGGCCTGGCAGGTGTAGCTCATaGCCAGCATCCTGTGTCCTTCTGCAGCGTTACACAGGTATTTCT +
Preference number: 5 (lower is better)
Translates to: VLPAGSGSGPGRCSS*PASCVLLQRYTGIS
Trigger: AGAAATACCTGTGTAACGCTGCAGAAGGACACAGGATGCTGGCCATGAGCTACACCTGCCAGGCCCGGAACCTGACCCCGCTGGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TGGTTGCATGTGTGGTCCACCACAGCGCCATGCTCTATCAGAAGCTaGACCACTTTGACATGGCCCTGCCAGGCTGCAGACTGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: WLHVWSTTAPCSIRS*TTLTWPCQAADCKA
Trigger: AGCCTTGCAGTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp AGAGATGGCACTAGCATTATTCCCAGCGTTGCCGACGAGGGACTGTaGAGTGGCTGGACCCGAACAGCAGCTCCATTTCTCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: RDGTSIIPSVADEGL*SGWTRTAAPFLLEA
Trigger: TGCCTCCAGGAGAAATGGAGCTGCTGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGCAACGCTGGGAATAATGCTAGTGCCATCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS GCA 90 bp GGGTGGCTTCATCCCCAGGAGTGGGAGCAGCACACACCTTTTAAATaGTTCCGCTGGGTTCCTCTCACACTCTCCAGGCTCGAGGAGACT +
Preference number: 5 (lower is better)
Translates to: GWLHPQEWEQHTPFK*FRWVPLTLSRLEET
Trigger: AGTCTCCTCGAGCCTGGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTGCTGCTCCCACTCCTGGGGATGAAGCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 90 bp ACCACCTTTGTGTGCCCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTaGCCATGGGCGTCTTCGATCTCTAAGTCGGCTCCCCTGGAGACA +
Preference number: 5 (lower is better)
Translates to: TTFVCPCLAARVSGV*PWASSISKSAPLET
Trigger: TGTCTCCAGGGGAGCCGACTTAGAGATCGAAGACGCCCATGGGCACACGCCACTCACTCTAGCTGCTAGACAAGGGCACACAAAGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp ACTCACTACTGGGAGAATTATGGCTGTGTCCTAAGGACTGGGTTGTaGATGAGGGGGACACGACGGACTGCCTGCTCCTGCTGCGAGGCA +
Preference number: 5 (lower is better)
Translates to: THYWENYGCVLRTGL*MRGTRRTACSCCEA
Trigger: TGCCTCGCAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp ACTAGCATTATTCCCAGCGTTGCCGACGAGGGACTGTGCAGTGGCTaGACCCGAACAGCAGCTCCATTTCTCCTGGAGGCAGTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: TSIIPSVADEGLCSG*TRTAAPFLLEAVLK
Trigger: CTTCAGCACTGCCTCCAGGAGAAATGGAGCTGCTGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGCAACGCTGGGAATAATGCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS CCA 90 bp CATCCCCAGGAGTGGGAGCAGCACACACCTTTTAAATGCTTCCGCTaGGTTCCTCTCACACTCTCCAGGCTCGAGGAGACTTTGGACGGC +
Preference number: 5 (lower is better)
Translates to: HPQEWEQHTPFKCFR*VPLTLSRLEETLDG
Trigger: GCCGTCCAAAGTCTCCTCGAGCCTGGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTGCTGCTCCCACTCCTGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp AGAGTAGCTGCAGTTGGACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTACGCGTGCCCTTTGCTaGCAGGCACACAGAGCGCGG +
Preference number: 5 (lower is better)
Translates to: RVAAVGLVGMCLLCHIKPTRALC*QAHRAR
Trigger: CCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGT...AGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTCCAACTGCAGCTACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CCAAGAGCCACTCGGCAAAGCTGTGGTGAAACAGGATCTTGGTGCTaGCCAAGCCATCCACCAAGAGCTTGGAGAGGACGTCTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: PRATRQSCGETGSWC*PSHPPRAWRGRLAC
Trigger: GCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGCTCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp AACCCTCCAACACACAAAGTGTCTGAGTCCTGGGCTTTGCAGAAGTaGAAAGCCAAAGCCTGGCGATGCAGACCTCTCTGCAGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: NPPTHKVSESWALQK*KAKAWRCRPLCRLA
Trigger: CGCCAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 90 bp GTGGCGTGTGCCCATGGGCGTCTTCGATCTCTAAGTCGGCTCCCCTaGAGACAAGCAAATTCACAACATCCAGACTGCCACTGTATGCGG +
Preference number: 5 (lower is better)
Translates to: VACAHGRLRSLSRLP*RQANSQHPDCHCMR
Trigger: CCGCATACAGTGGCAGTCTGGATGTTGTGAATTTGCTTGTCTCCAGGGGAGCCGACTTAGAGATCGAAGACGCCCATGGGCACACGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGACACAGACGGTCCTTACTGACGCGTGCCCTTaGCTTGCAGGCACACAGAGC +
Preference number: 5 (lower is better)
Translates to: DWLACACSVTLSLTQTVLTDACP*LAGTQS
Trigger: GCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGT...AAGGACCGTCTGTGTCAGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp TGGGTGCAGTGCTTCACATCCAAGAGCCACTCGGCAAAGCTGTGGTaGAACAGGATCTTGGTGCTGCCCAAGCCATCCACCAAGAGCTTG +
Preference number: 5 (lower is better)
Translates to: WVQCFTSKSHSAKLW*NRILVLPKPSTKSL
Trigger: CAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGCTCTTGGATGTGAAGCACTGCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp CATCCAAGAGCCACTCGGCAAAGCTGTGGTGAAACAGGATCTTGGTaGTGCCCAAGCCATCCACCAAGAGCTTGGAGAGGACGTCTAGCT +
Preference number: 5 (lower is better)
Translates to: HPRATRQSCGETGSW*CPSHPPRAWRGRLA
Trigger: AGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGCTCTTGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp TTTGTGTGCCCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTGCCCATaGGCGTCTTCGATCTCTAAGTCGGCTCCCCTGGAGACAAGCAAA +
Preference number: 5 (lower is better)
Translates to: FVCPCLAARVSGVCP*ASSISKSAPLETSK
Trigger: TTTGCTTGTCTCCAGGGGAGCCGACTTAGAGATCGAAGACGCCCATGGGCACACGCCACTCACTCTAGCTGCTAGACAAGGGCACACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCATCTGGCTTCCATCTGGCAGAGCTTTTCAGAGAATaGTTGGACAGGGATGACTTT +
Preference number: 5 (lower is better)
Translates to: GRESVSAARPQASGFHLAELFRE*LDRDDF
Trigger: AAAGTCATCCCTGTCCAACAATTCTCTGAAAAGCTC...TGCCAGATGGAAGCCAGATGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TGGCTACAGCACCCTGGTCAGCCTGGTCCTCGCCAGAAGCTGTTTTTGTTCTACCAGCTGCAGGACCTCTaGCTCCTTGGGTATCAAGGT +
Preference number: 5 (lower is better)
Translates to: WLQHPGQPGPRQKLFLFYQLQDL*LLGYQG
Trigger: ACCTTGATACCCAAGGAGCAAGAGGTCCTGCAGCTG...GTAGAACAAAAACAGCTTCTGGCGAGGACCAGGCTGACCAGGGTGCTGTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp GCAGGACCTCTTGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTTaGCTGGGGTACCATTCCATATCATCCACAGAGCCAGTTCGGCTG +
Preference number: 5 (lower is better)
Translates to: AGPLAPWVSRWTGSL*LGYHSISSTEPVRL
Trigger: CAGCCGAACTGGCTCTGTGGATGATATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGAGGTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp ATCAGAAGCTGCACCACTTTGACATGGCCCTGCCAGGCTGCAGACTaGAAGGCTGAGCGCTTCTCATTGTCTGCTGCATTGACATCTGCA +
Preference number: 5 (lower is better)
Translates to: IRSCTTLTWPCQAAD*KAERFSLSAALTSA
Trigger: TGCAGATGTCAATGCAGCAGACAATGAGAAGCGCTCAGCCTTGCAGTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp CATTCAAACTCACTACTGGGAGAATTATGGCTGTGTCCTAAGGACTaGGTTGTGGATGAGGGGGACACGACGGACTGCCTGCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: HSNSLLGELWLCPKD*VVDEGDTTDCLLLL
Trigger: CAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGTTTGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp TCACATCCAAGAGCCACTCGGCAAAGCTGTGGTGAAACAGGATCTTaGTGCTGCCCAAGCCATCCACCAAGAGCTTGGAGAGGACGTCTA +
Preference number: 5 (lower is better)
Translates to: SHPRATRQSCGETGS*CCPSHPPRAWRGRL
Trigger: TAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGCTCTTGGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp ATGGCCAGCATCCTGTGTCCTTCTGCAGCGTTACACAGGTATTTCTaGGTGCAGTGCTTCACATCCAAGAGCCACTCGGCAAAGCTGTGG +
Preference number: 5 (lower is better)
Translates to: MASILCPSAALHRYF*VQCFTSKSHSAKLW
Trigger: CCACAGCTTTGCCGAGTGGCTCTTGGATGTGAAGCACTGCACCCAGAAATACCTGTGTAACGCTGCAGAAGGACACAGGATGCTGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp GACCTCTTGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTTGACTaGGGTACCATTCCATATCATCCACAGAGCCAGTTCGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: DLLLLGYQGGQGVFD*GTIPYHPQSQFGWL
Trigger: GAGCCAGCCGAACTGGCTCTGTGGATGATATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp TTTACCTCTGCGCCATGGTCCAGCAGGTGCTCTACGATCTCTCTGTaGCCCATATATGCTGCAGCTATGAGTGCAGTCCTCCCTTCGTTG +
Preference number: 5 (lower is better)
Translates to: FTSAPWSSRCSTISL*PIYAAAMSAVLPSL
Trigger: CAACGAAGGGAGGACTGCACTCATAGCTGCAGCATATATGGGCCACAGAGAGATCGTAGAGCACCTGCTGGACCATGGCGCAGAGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp AACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATGCAGCGGTGGCTCCTTGGTaGCATGTGTGGTCCACCACA +
Preference number: 5 (lower is better)
Translates to: NNKYGTLPLRRHLTVAHAAVAPW*HVWSTT
Trigger: TGTGGTGGACCACACATGCAACCAAGGAGCCACCGC...TGCATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGTTGGAGGAGTCCACTTaGGCAGATCTGGGCTACCAG +
Preference number: 5 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAELEEST*ADLGYQ
Trigger: CTGGTAGCCCAGATCTGCCAAAGTGGACTCCTCCAA...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp AGCATTTGTCTGCAACTACATTTGCGGAAAGGGTTGACGGAGGGCAGAGTAAGCTCCCCTTCCACCACATaGCAGCCTTCGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: SICLQLHLRKGLTEGRVSSPSTT*QPSSTE
Trigger: CTCCGTGGACGAAGGCTGCAATGTGGTGGAAGGGGA...GCTTACTCTGCCCTCCGTCAACCCTTTCCGCAAATGTAGTTGCAGACAAATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTTCCCCTTCCACCACATaGCAGCCTTCGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: VYICIYSVWWRLLQHGGCSPSTT*QPSSTE
Trigger: CTCCGTGGACGAAGGCTGCAATGTGGTGGAAGGGGA...ACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTCAGGACACAGTACTGCGGGCGGGAGTCAGTCTCAGCAGCACGCCCTCAGGCAGTTAGAGACATATTTTaGGTCCACACAGCATGGTAT +
Preference number: 5 (lower is better)
Translates to: VRTQYCGRESVSAARPQAVRDIF*VHTAWY
Trigger: ATACCATGCTGTGTGGACCAAAAATATGTCTCTAAC...TGCCTGAGGGCGTGCTGCTGAGACTGACTCCCGCCCGCAGTACTGTGTCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp TTTTTGGCTGCCACCCTCATGGCAGTGCGTCCAAATTGGTCGGCATaGTTGGGATCAGCACCGTGTTCCAGCAAAACCTGCACTACATCC +
Preference number: 5 (lower is better)
Translates to: FLAATLMAVRPNWSA*LGSAPCSSKTCTTS
Trigger: GGATGTAGTGCAGGTTTTGCTGGAACACGGTGCTGATCCCAATCATGCCGACCAATTTGGACGCACTGCCATGAGGGTGGCAGCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 90 bp CTGGGCTACCAGACCTCTGATAAACCCTCCAACACACAAAGTGTCTaGGTCCTGGGCTTTGCAGAAGTGGAAAGCCAAAGCCTGGCGATG +
Preference number: 5 (lower is better)
Translates to: LGYQTSDKPSNTQSV*VLGFAEVESQSLAM
Trigger: CATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTTTATCAGAGGTCTGGTAGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 90 bp CCAGCATCCTGTGTCCTTCTGCAGCGTTACACAGGTATTTCTGGGTaGAGTGCTTCACATCCAAGAGCCACTCGGCAAAGCTGTGGTGAA +
Preference number: 5 (lower is better)
Translates to: PASCVLLQRYTGISG*SASHPRATRQSCGE
Trigger: TTCACCACAGCTTTGCCGAGTGGCTCTTGGATGTGAAGCACTGCACCCAGAAATACCTGTGTAACGCTGCAGAAGGACACAGGATGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TTGATGTTGGCTCCACACCCAATTAGACAGTTAACCACCTTTGTGTaGCCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTGCCCATGGGCG +
Preference number: 5 (lower is better)
Translates to: LMLAPHPIRQLTTFV*PCLAARVSGVCPWA
Trigger: CGCCCATGGGCACACGCCACTCACTCTAGCTGCTAGACAAGGGCACACAAAGGTGGTTAACTGTCTAATTGGGTGTGGAGCCAACATCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp CTCGGTTTCACCTGGCTCCATTCAAACTCACTACTGGGAGAATTATaGCTGTGTCCTAAGGACTGGGTTGTGGATGAGGGGGACACGACG +
Preference number: 5 (lower is better)
Translates to: LGFTWLHSNSLLGEL*LCPKDWVVDEGDTT
Trigger: CGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGTTTGAATGGAGCCAGGTGAAACCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp ACTCGGCCATTGTCAGCTGGTTTTCTAAGGCCAATATGTAAAGCGTaGGCCGCCCGTCAGCATCTTTGTAGTTCACATCAGCCCCATGGC +
Preference number: 5 (lower is better)
Translates to: TRPLSAGFLRPICKA*AARQHLCSSHQPHG
Trigger: GCCATGGGGCTGATGTGAACTACAAAGATGCTGACGGGCGGCCCACGCTTTACATATTGGCCTTAGAAAACCAGCTGACAATGGCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GCTTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACAATGCCTTCTGTCTCATACCAGACTTGCTGGAGTaGTCTGACTTGCCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: ASIWQLSGSSNHNAFCLIPDLLE*SDLPPL
Trigger: TAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGG...TATGAGACAGAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGGGGGCTGTGCTGAGAGCTTCAGGGCTTGTTaGAGGTTCAGCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: ICIYSVWWRLLQHGGCAESFRAC*RFSSVS
Trigger: GGAGACAGAGCTGAACCTCAAACAAGCCCTGAAGCT...CTCAGCACAGCCCCCATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 90 bp CTAAGTCGGCTCCCCTGGAGACAAGCAAATTCACAACATCCAGACTaGCACTGTATGCGGCATTGGCCAGCAGAGTTCTCCCATTGGAAT +
Preference number: 5 (lower is better)
Translates to: LSRLPWRQANSQHPD*HCMRHWPAEFSHWN
Trigger: ATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCATACAGTGGCAGTCTGGATGTTGTGAATTTGCTTGTCTCCAGGGGAGCCGACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp ACCAGACCTCTGATAAACCCTCCAACACACAAAGTGTCTGAGTCCTaGGCTTTGCAGAAGTGGAAAGCCAAAGCCTGGCGATGCAGACCT +
Preference number: 5 (lower is better)
Translates to: TRPLINPPTHKVSES*ALQKWKAKAWRCRP
Trigger: AGGTCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTTTATCAGAGGTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GCGGGAGAACTTGTTCCTGTCTCTGAAGTACTGGACTGGTTTTGGTTGAGGAATGTCAGAGACTGCATCTaGGACGGTGCCGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: AGELVPVSEVLDWFWLRNVRDCI*DGADCG
Trigger: TCCACAGTCGGCACCGTCCAAGATGCAGTCTCTGAC...ATTCCTCAACCAAAACCAGTCCAGTACTTCAGAGACAGGAACAAGTTCTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GACTGGTTGGCATGTGCCTGCTCTGTCACATTAAGCCTGACACAGACGGTCCTTTCTGAGTCCTGGGCTTaGCAGAAGTGGAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: DWLACACSVTLSLTQTVLSESWA*QKWKAK
Trigger: TTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGA...AAGGACCGTCTGTGTCAGGCTTAATGTGACAGAGCAGGCACATGCCAACCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS TCA 90 bp ATGCGGCATTGGCCAGCAGAGTTCTCCCATTGGAATCACACTGATTaGCAGAGGCTCCGTTATCCAGTAAAGTCCGAATGGAGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: MRHWPAEFSHWNHTD*QRLRYPVKSEWSPL
Trigger: GAGAGGACTCCATTCGGACTTTACTGGATAACGGAGCCTCTGTCAATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp CTGTATGCGGCATTGGCCAGCAGAGTTCTCCCATTGGAATCACACTaGTTGACAGAGGCTCCGTTATCCAGTAAAGTCCGAATGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LYAALASRVLPLESH*LTEAPLSSKVRMES
Trigger: GGACTCCATTCGGACTTTACTGGATAACGGAGCCTCTGTCAATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGACTGCTTCAGCATGAGAAGCTGCACCACTTaGACATGGCCCTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: ELQFTSAFIRCGGDCFSMRSCTT*TWPCQA
Trigger: AGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCT...CATGCTGAAGCAGTCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp CGTGGCACATGCACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTGGTTGGTCCTAAGGACTGGGTaGTGGATGAGGGGGACACGA +
Preference number: 5 (lower is better)
Translates to: RGTCTFTKWENTQNRVWLVLRTG*WMRGTR
Trigger: TCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGAC...CAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 90 bp CCCAAGCCATCCACCAAGAGCTTGGAGAGGACGTCTAGCTTGCGCTaGAAGTCTTCCAAGGTTAGAGACATATTTTTGGTCCACACAGCA +
Preference number: 5 (lower is better)
Translates to: PKPSTKSLERTSSLR*KSSKVRDIFLVHTA
Trigger: TGCTGTGTGGACCAAAAATATGTCTCTAACCTTGGAAGACTTTCAGCGCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 90 bp CCATATCATCCACAGAGCCAGTTCGGCTGGCTCCAGCTGCAAGTTTaGATTAATCAAGTGCAAGGCAAATTCTTGTGCTTCCAGCGGGGT +
Preference number: 5 (lower is better)
Translates to: PYHPQSQFGWLQLQV*INQVQGKFLCFQRG
Trigger: ACCCCGCTGGAAGCACAAGAATTTGCCTTGCACTTGATTAATTCAAACTTGCAGCTGGAGCCAGCCGAACTGGCTCTGTGGATGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp ATCCAGGCGGTGGAGGATGTACTGCTGAACATCCTTAACGATATATaGCTTCCGCAGGTCATCCAAACTGATCTTCCGGAACCCACTGAA +
Preference number: 5 (lower is better)
Translates to: IQAVEDVLLNILNDI*LPQVIQTDLPEPTE
Trigger: TTCAGTGGGTTCCGGAAGATCAGTTTGGATGACCTGCGGAAGGCATATATCGTTAAGGATGTTCAGCAGTACATCCTCCACCGCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TGCTGCCCAAGCCATCCACCAAGAGCTTGGAGAGGACGTCTAGCTTaGGCTGAAAGTCTTCCAAGGTTAGAGACATATTTTTGGTCCACA +
Preference number: 5 (lower is better)
Translates to: CCPSHPPRAWRGRLA*AESLPRLETYFWST
Trigger: TGTGGACCAAAAATATGTCTCTAACCTTGGAAGACTTTCAGCGCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 90 bp TCCCCTGGAGACAAGCAAATTCACAACATCCAGACTGCCACTGTATaGGGCATTGGCCAGCAGAGTTCTCCCATTGGAATCACACTGATT +
Preference number: 5 (lower is better)
Translates to: SPGDKQIHNIQTATV*GIGQQSSPIGITLI
Trigger: AATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCATACAGTGGCAGTCTGGATGTTGTGAATTTGCTTGTCTCCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 90 bp TTAGAGACATATTTTTGGTCCACACAGCATGGTATAATTCTGTCATaGTCAGGGGCCGGCAGGCTGCCAGGATCACGTTCAGAATGGGCT +
Preference number: 5 (lower is better)
Translates to: LETYFWSTQHGIILS*SGAGRLPGSRSEWA
Trigger: AGCCCATTCTGAACGTGATCCTGGCAGCCTGCCGGCCCCTGACCATGACAGAATTATACCATGCTGTGTGGACCAAAAATATGTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ACAGATGACACACAGGAAATGAGTTTGGCTGACACTGAAAAGCACAAGGCAAGGGGCAGTGCGTCCAAATaGGTCGGCATGATTGGGATC +
Preference number: 5 (lower is better)
Translates to: TDDTQEMSLADTEKHKARGSASK*VGMIGI
Trigger: GATCCCAATCATGCCGACCAATTTGGACGCACTGCC...CCTTGCCTTGTGCTTTTCAGTGTCAGCCAAACTCATTTCCTGTGTGTCATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGGTCAGAGACTGCATCTaGGACGGTGCCGACTGTGGA +
Preference number: 5 (lower is better)
Translates to: LVVWRNCSLHLHLFGVVEVRDCI*DGADCG
Trigger: TCCACAGTCGGCACCGTCCAAGATGCAGTCTCTGAC...CTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGAGTCCTAAGGACTGGGTaGTGGATGAGGGGGACACGA +
Preference number: 5 (lower is better)
Translates to: WLYGGTAVYICIYSVWWRVLRTG*WMRGTR
Trigger: TCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGAC...TCTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ATTTCATTTAGCTGGAGGAGTCGAAGGCAGCCAGTGAATGATTTAGGGATCAGAGCATTATTCCCAGCGTaGCCGACGAGGGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: ISFSWRSRRQPVNDLGIRALFPA*PTRDCA
Trigger: TGCACAGTCCCTCGTCGGCAACGCTGGGAATAATGC...TCTGATCCCTAAATCATTCACTGGCTGCCTTCGACTCCTCCAGCTAAATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp CGTGGCACATGCACGTTTACCAAATGGGAAAATACTCAAAACCGGGTTTGGTTGTTGGAGGAGTCCACTTaGGCAGATCTGGGCTACCAG +
Preference number: 5 (lower is better)
Translates to: RGTCTFTKWENTQNRVWLLEEST*ADLGYQ
Trigger: CTGGTAGCCCAGATCTGCCAAAGTGGACTCCTCCAA...CAACCAAACCCGGTTTTGAGTATTTTCCCATTTGGTAAACGTGCATGTGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS TCA 90 bp GGTGGGCTACTCCCAGACTTGGCAACAGGTCCCCTTTTGTCAAACTaGGTCATTTCATACTCTAGAACCTTTGGCTGTGAGGAGCTATTC +
Preference number: 5 (lower is better)
Translates to: GGLLPDLATGPLLSN*VISYSRTFGCEELF
Trigger: GAATAGCTCCTCACAGCCAAAGGTTCTAGAGTATGAAATGACTCAGTTTGACAAAAGGGGACCTGTTGCCAAGTCTGGGAGTAGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 90 bp CGTCTAGCTTGCGCTGAAAGTCTTCCAAGGTTAGAGACATATTTTTaGTCCACACAGCATGGTATAATTCTGTCATGGTCAGGGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RLACAESLPRLETYF*STQHGIILSWSGAG
Trigger: GCCGGCCCCTGACCATGACAGAATTATACCATGCTGTGTGGACCAAAAATATGTCTCTAACCTTGGAAGACTTTCAGCGCAAGCTAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTGGGACCGTTTCTTATCTTTGTAATAGAGAAGTCATTGTTTTTCCCAGTTGTGGAGGGCGGTGGCTCCTaGGTTGCATGTGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: VGPFLIFVIEKSLFFPVVEGGGS*VACVVH
Trigger: GTGGACCACACATGCAACCAAGGAGCCACCGCCCTC...CACAACTGGGAAAAACAATGACTTCTCTATTACAAAGATAAGAAACGGTCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp CAAAATGACCAAGTACAGCAAGCAGGCTGGCTACAGCACCCTGGTCAGCCTGGTCTCCTTTATTTGACTTaGTTGACTTCAGACTCGGTT +
Preference number: 5 (lower is better)
Translates to: QNDQVQQAGWLQHPGQPGLLYLT*LTSDSV
Trigger: AACCGAGTCTGAAGTCAACAAAGTCAAATAAAGGAG...ACCAGGCTGACCAGGGTGCTGTAGCCAGCCTGCTTGCTGTACTTGGTCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTATTCATTGTACACCATAGAGCACGGGTTTCCCGGTCCTCTTTTTCCCCAAACCTCGTCTGGGCCATTTaGCAGACTTTCTCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: VFIVHHRARVSRSSFSPNLVWAI*QTFSSQ
Trigger: TTGGGAAGAGAAAGTCTGCAAAATGGCCCAGACGAG...GTTTGGGGAAAAAGAGGACCGGGAAACCCGTGCTCTATGGTGTACAATGAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS-3UTR CAA 90 bp ACTTGTGATAGACAGCACACTGTACATTCAAAGAACATCCATTCCACCAAGCCAGCATTATTCCCAGCGTaGCCGACGAGGGACTGTGCA +
Preference number: 5 (lower is better)
Translates to: TCDRQHTVHSKNIHSTKPALFPA*PTRDCA
Trigger: TGCACAGTCCCTCGTCGGCAACGCTGGGAATAATGC...TGGCTTGGTGGAATGGATGTTCTTTGAATGTACAGTGTGCTGTCTATCACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS TCA 90 bp TTTGTTCTAGCACCTTGTTCAATGAGAGCTTCACATATTAACCTGTaGCCCTCAAAAGCTGCCATGTGTAGAGGCGTCCAGCCAGCATCG +
Preference number: 5 (lower is better)
Translates to: FVLAPCSMRASHINL*PSKAAMCRGVQPAS
Trigger: CGATGCTGGCTGGACGCCTCTACACATGGCAGCTTTTGAGGGTCACAGGTTAATATGTGAAGCTCTCATTGAACAAGGTGCTAGAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGCTGGAGCTTCAGGGCTaGTTTGAGGTTCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: VWLYGGTAVYICIYSVWWLELQG*FEVQLC
Trigger: ACAGAGCTGAACCTCAAACAAGCCCTGAAGCTCCAG...CCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGCTGGAGCTTCAGGGCTaGTTTGAGGTTCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GLVVWRNCSLHLHLFGVVLELQG*FEVQLC
Trigger: ACAGAGCTGAACCTCAAACAAGCCCTGAAGCTCCAG...CACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGGCTGAGCGCTTCTCATaGTCTGCTGCATTGACATCT +
Preference number: 5 (lower is better)
Translates to: LVVWRNCSLHLHLFGVVEAERFS*SAALTS
Trigger: AGATGTCAATGCAGCAGACAATGAGAAGCGCTCAGC...CTCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp CGTGGAAAATTCATCACAAAGTCATTTTTCACCTCCGTGTGGCATCAACACAGAAGCTTCAGGGCTTGTTaGAGGTTCAGCTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: RGKFITKSFFTSVWHQHRSFRAC*RFSSVS
Trigger: GGAGACAGAGCTGAACCTCAAACAAGCCCTGAAGCT...TCTGTGTTGATGCCACACGGAGGTGAAAAATGACTTTGTGATGAATTTTCCACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGTCTGAGTCCTGGGCTTaGCAGAAGTGGAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: VWLYGGTAVYICIYSVWWSESWA*QKWKAK
Trigger: TTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGA...CCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 90 bp CAACACGTAATGCATTTCTCCCATCATAGCCTCGTTGATCGATGTTaGATTTGTTCTCCAGCAGGATCTGTACACAGTCATAATGGCCCT +
Preference number: 5 (lower is better)
Translates to: QHVMHFSHHSLVDRC*ICSPAGSVHSHNGP
Trigger: AGGGCCATTATGACTGTGTACAGATCCTGCTGGAGAACAAATCCAACATCGATCAACGAGGCTATGATGGGAGAAATGCATTACGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GGTTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGTCATTGTCTGCTGCATaGACATCTGCATGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GLVVWRNCSLHLHLFGVVSLSAA*TSAWQA
Trigger: TGCTTGCCATGCAGATGTCAATGCAGCAGACAATGA...CACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAGCTGAGCGCTTCTCATaGTCTGCTGCATTGACATCT +
Preference number: 5 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGAERFS*SAALTS
Trigger: AGATGTCAATGCAGCAGACAATGAGAAGCGCTCAGC...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGACCAGACTTGCTGGAGTaGTCTGACTTGCCTCCTTTA +
Preference number: 5 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGPDLLE*SDLPPL
Trigger: TAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGG...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGACTTGTCCTCATAACCTaGGAGGAGTCCACTTTGGCA +
Preference number: 5 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGLVLIT*EESTLA
Trigger: TGCCAAAGTGGACTCCTCCAAGGTTATGAGGACAAG...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACCTTCGAGGGGATGCGCCCATCATaGTCTATCTCATTTGTTCTA +
Preference number: 5 (lower is better)
Translates to: AYFFHVSPHVIPGSLTFEGMRPS*SISFVL
Trigger: TAGAACAAATGAGATAGACAATGATGGGCGCATCCC...CTCGAAGGTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp GAAAACAATAAATACGGAACACTGCCTTTGCGGAGACACCTGACCGTGGCACATCTCCTTTATTTGACTTaGTTGACTTCAGACTCGGTT +
Preference number: 5 (lower is better)
Translates to: ENNKYGTLPLRRHLTVAHLLYLT*LTSDSV
Trigger: AACCGAGTCTGAAGTCAACAAAGTCAAATAAAGGAG...ATGTGCCACGGTCAGGTGTCTCCGCAAAGGCAGTGTTCCGTATTTATTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTCCACAAACACTCAAAGTGTTTCTCTCAAAGAGAGTCACGCATTGCAAGCAATTCATTGTCTGCTGCATaGACATCTGCATGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: FHKHSKCFSQRESRIASNSLSAA*TSAWQA
Trigger: TGCTTGCCATGCAGATGTCAATGCAGCAGACAATGA...ATTGCTTGCAATGCGTGACTCTCTTTGAGAGAAACACTTTGAGTGTTTGTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TCAATGTACATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGCTTGTCCTCATAACCTaGGAGGAGTCCACTTTGGCA +
Preference number: 5 (lower is better)
Translates to: SMYILGYLHTPHRANNRKLVLIT*EESTLA
Trigger: TGCCAAAGTGGACTCCTCCAAGGTTATGAGGACAAG...CTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAATGTACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTCAGACGCTTACTTCTTTCATGTTTCACCACATGTCATACCAGGGTCACTGACATTTGTTCTAGCACCTaGTTCAATGAGAGCTTCACA +
Preference number: 5 (lower is better)
Translates to: FRRLLLSCFTTCHTRVTDICSST*FNESFT
Trigger: TGTGAAGCTCTCATTGAACAAGGTGCTAGAACAAAT...GTCAGTGACCCTGGTATGACATGTGGTGAAACATGAAAGAAGTAAGCGTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ATGGGAAAATACTCAAAACCGGGTTTGGTTGTATGGAGGAACTGCAGTTTACATGAGCTTTTCAGAGAATaGTTGGACAGGGATGACTTT +
Preference number: 5 (lower is better)
Translates to: MGKYSKPGLVVWRNCSLHELFRE*LDRDDF
Trigger: AAAGTCATCCCTGTCCAACAATTCTCTGAAAAGCTC...ATGTAAACTGCAGTTCCTCCATACAACCAAACCCGGTTTTGAGTATTTTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp TTTGGTTGTATGGAGGAACTGCAGTTTACATCTGCATTTATTCGGTGTGGTGGAACTTGCCTCCTTTATTaGACTTTGTTGACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: FGCMEELQFTSAFIRCGGTCLLY*TLLTSD
Trigger: GTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGT...TCCACCACACCGAATAAATGCAGATGTAAACTGCAGTTCCTCCATACAACCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ACAGACACTCGTTTTTATCCAATGCTGAAGGTTAGTGGACAGGAAACAGTTGCAACTTGCCTCCTTTATTaGACTTTGTTGACTTCAGAC +
Preference number: 5 (lower is better)
Translates to: TDTRFYPMLKVSGQETVATCLLY*TLLTSD
Trigger: GTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGT...TGCAACTGTTTCCTGTCCACTAACCTTCAGCATTGGATAAAAACGAGTGTCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS-3UTR CAA 90 bp ATTTTAGGTTATTTACACACCCCACACAGAGCGAACAACAGAAAGAAAGCATTTCCCATCATAGCCTCGTaGATCGATGTTGGATTTGTT +
Preference number: 5 (lower is better)
Translates to: ILGYLHTPHRANNRKKAFPIIAS*IDVGFV
Trigger: AACAAATCCAACATCGATCAACGAGGCTATGATGGG...AAATGCTTTCTTTCTGTTGTTCGCTCTGTGTGGGGTGTGTAAATAACCTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GCAGGCTGGCGGGCGAACTTGGCCACAGGAGCTCAGTaGACAGGGCCGTCTTCCCACTGCCAGGCCCTCCTA +
Preference number: 6 (lower is better)
Translates to: AGWRANLATGAQ*TGPSSHCQALL
Trigger: TAGGAGGGCCTGGCAGTGGGAAGACGGCCCTGTGCACTGAGCTCCTGTGGCCAAGTTCGCCCGCCAGCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 72 bp GCGCCCCAGAACAGAAGCGTGTTGACCACGGACGCATaGCCCATGGAAGCTGCAGCCAGAAGGGGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: APQNRSVLTTDA*PMEAAARRGVR
Trigger: GCGGACGCCCCTTCTGGCTGCAGCTTCCATGGGGCATGCGTCCGTGGTCAACACGCTTCTGTTCTGGGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp CCCCTCGATCAATCAGGAGGCTCACGACTGACGCGTGCCCTTTGCTaGCAGGCACACAGAGCGCGGCCACGGAGAGGGCTGTCCTGCCGT +
Preference number: 6 (lower is better)
Translates to: PLDQSGGSRLTRALC*QAHRARPRRGLSCR
Trigger: ACGGCAGGACAGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GCCCCTCGATCAATCAGGAGGCTCACGACTGACGCGTaGCCTTTGCTTGCAGGCACACAGAGCGCGGCCACG +
Preference number: 6 (lower is better)
Translates to: APRSIRRLTTDA*PLLAGTQSAAT
Trigger: CGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp CCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTTaGTTGCATGTGTGGTCCACCACAGCGCCATGCTCT +
Preference number: 6 (lower is better)
Translates to: PSWAAMQRAVAP*LHVWSTTAPCS
Trigger: AGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp CCACATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTaGCTCCTTGGTTGCATGTGTGGTCCACCACAGCGC +
Preference number: 6 (lower is better)
Translates to: PHVPPGLRCRGR*LLGCMCGPPQR
Trigger: GCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp TCCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTaGGTTGCATGTGTGGTCCACCACAGCGCCATGCTC +
Preference number: 6 (lower is better)
Translates to: SLLGCDAEGGGS*VACVVHHSAML
Trigger: GAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp CAATCAGGAGGCTCACGACTGACGCGTGCCCTTTGCTaGCAGGCACACAGAGCGCGGCCACGGAGAGGGCTG +
Preference number: 6 (lower is better)
Translates to: QSGGSRLTRALC*QAHRARPRRGL
Trigger: CAGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp TCAGCCCCTCGATCAATCAGGAGGCTCACGACTGACGCGTGCCCTTaGCTTGCAGGCACACAGAGCGCGGCCACGGAGAGGGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: SAPRSIRRLTTDACP*LAGTQSAATERAVL
Trigger: CAGGACAGCCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp TGCTGTCCACGGCTGCGCCCCAGAACAGAAGCGTGTTaGCCACGGACGCATGCCCCATGGAAGCTGCAGCCA +
Preference number: 6 (lower is better)
Translates to: CCPRLRPRTEAC*PRTHAPWKLQP
Trigger: TGGCTGCAGCTTCCATGGGGCATGCGTCCGTGGTCAACACGCTTCTGTTCTGGGGCGCAGCCGTGGACAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp TTGTGGATGAGGGGGACACGACGGACTGCCTGCTCCTaGTGCGAGGCAGTGAGTGCTGCTGGATCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: LWMRGTRRTACS*CEAVSAAGSAP
Trigger: CGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp AAGGACTGGGTTGTGGATGAGGGGGACACGACGGACTaGCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: KDWVVDEGDTTD*LLLLRGSECCW
Trigger: CCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GATCAATCAGGAGGCTCACGACTGACGCGTGCCCTTTaGTTGCAGGCACACAGAGCGCGGCCACGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: DQSGGSRLTRAL*LQAHRARPRRG
Trigger: CCCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp CGATCAATCAGGAGGCTCACGACTGACGCGTGCCCTTaGCTTGCAGGCACACAGAGCGCGGCCACGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSIRRLTTDACP*LAGTQSAATER
Trigger: CCTCTCCGTGGCCGCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp TGTGCAGCTGGTTCAGCGTCTCAGCCGTCTCCTTGGTaGGGTGCTGCCGCAGTGCCTCCTCTTGATCCAGGC +
Preference number: 6 (lower is better)
Translates to: CAAGSASQPSPW*GAAAVPPLDPG
Trigger: GCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTCACCAAGGAGACGGCTGAGACGCTGAACCAGCTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp CGTCTCAGCCGTCTCCTTGGTGAGGTGCTGCCGCAGTaGCTCCTCTTGATCCAGGCGGTGGAGGATGTACTG +
Preference number: 6 (lower is better)
Translates to: RLSRLLGEVLPQ*LLLIQAVEDVL
Trigger: CAGTACATCCTCCACCGCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTCACCAAGGAGACGGCTGAGACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp CAGGTTCAGGACAATGTCCTCGTGGCCACCCCAGGCTaGTGCACGCAGAGCAGTTCGGCTGTCTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: QVQDNVLVATPG*CTQSSSAVCIC
Trigger: GCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCACGAGGACATTGTCCTGAACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp CACGGAGTCAACCAACAGGTAGAGGCTCTGCGGGGGTaGCTTCATCCCCAGGAGTGGGAGCAGCACACACCT +
Preference number: 6 (lower is better)
Translates to: HGVNQQVEALRG*LHPQEWEQHTP
Trigger: AGGTGTGTGCTGCTCCCACTCCTGGGGATGAAGCCACCCCCGCAGAGCCTCTACCTGTTGGTTGACTCCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 72 bp GACCAGCCAAGAGCTCTGCCACAGTCCCCGAGAGGCTaGGTGATGTCTGCTCCCCTTCCACCACATTGCAGC +
Preference number: 6 (lower is better)
Translates to: DQPRALPQSPRG*VMSAPLPPHCS
Trigger: GCTGCAATGTGGTGGAAGGGGAGCAGACATCACCCAGCCTCTCGGGGACTGTGGCAGAGCTCTTGGCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 72 bp GCGGGGTCAGGTTCCGGGCCTGGCAGGTGTAGCTCATaGCCAGCATCCTGTGTCCTTCTGCAGCGTTACACA +
Preference number: 6 (lower is better)
Translates to: AGSGSGPGRCSS*PASCVLLQRYT
Trigger: TGTGTAACGCTGCAGAAGGACACAGGATGCTGGCCATGAGCTACACCTGCCAGGCCCGGAACCTGACCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp ACATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTTGGTaGCATGTGTGGTCCACCACAGCGCCATGCTCTATCAGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: TCPSWAAMQRAVAPW*HVWSTTAPCSIRSC
Trigger: GCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 90 bp CAGGAGGCCCCCTTTCCAGAGATGGCACTAGCATTATTCCCAGCGTaGCCGACGAGGGACTGTGCAGTGGCTGGACCCGAACAGCAGCTC +
Preference number: 6 (lower is better)
Translates to: QEAPFPEMALALFPA*PTRDCAVAGPEQQL
Trigger: GAGCTGCTGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGCAACGCTGGGAATAATGCTAGTGCCATCTCTGGAAAGGGGGCCTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS TCA 72 bp TACCTCAGCCCCTCGATCAATCAGGAGGCTCACGACTaGCGCGTGCCCTTTGCTTGCAGGCACACAGAGCGC +
Preference number: 6 (lower is better)
Translates to: YLSPSINQEAHD*RVPFACRHTER
Trigger: GCGCTCTGTGTGCCTGCAAGCAAAGGGCACGCGTCAGTCGTGAGCCTCCTGATTGATCGAGGGGCTGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp GCAGCCAGAAGGGGCGTCCGCCCGTTGTTATCGGTGTaGTCGACATCTGCTCCTCCTTCTAGCAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: AARRGVRPLLSV*STSAPPSSSRS
Trigger: GGACCTGCTGCTAGAAGGAGGAGCAGATGTCGATCACACCGATAACAACGGGCGGACGCCCCTTCTGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp CCTGCACTACATCCACATGTCCCTCCTGGGCTGCGATaGAGAGGGCGGTGGCTCCTTGGTTGCATGTGTGGT +
Preference number: 6 (lower is better)
Translates to: PALHPHVPPGLR*RGRWLLGCMCG
Trigger: ACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGATGTAGTGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp AAGTGGAAAGCCAAAGCCTGGCGATGCAGACCTCTCTaGAGGCTGGCGGGCGAACTTGGCCACAGGAGCTCA +
Preference number: 6 (lower is better)
Translates to: KWKAKAWRCRPL*RLAGELGHRSS
Trigger: TGAGCTCCTGTGGCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGCTTTCCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 72 bp TGGGCTTTGCAGAAGTGGAAAGCCAAAGCCTGGCGATaGAGACCTCTCTGCAGGCTGGCGGGCGAACTTGGC +
Preference number: 6 (lower is better)
Translates to: WALQKWKAKAWR*RPLCRLAGELG
Trigger: GCCAAGTTCGCCCGCCAGCCTGCAGAGAGGTCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 72 bp GTTCAGGACAATGTCCTCGTGGCCACCCCAGGCTGCTaGACGCAGAGCAGTTCGGCTGTCTGCATCTGCACA +
Preference number: 6 (lower is better)
Translates to: VQDNVLVATPGC*TQSSSAVCICT
Trigger: TGTGCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCACGAGGACATTGTCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GGCTGTCCTGCCGTCCACGTCCTCGTGGTTTACCTCTaGGCCATGGTCCAGCAGGTGCTCTACGATCTCTCT +
Preference number: 6 (lower is better)
Translates to: GCPAVHVLVVYL*AMVQQVLYDLS
Trigger: AGAGAGATCGTAGAGCACCTGCTGGACCATGGCGCAGAGGTAAACCACGAGGACGTGGACGGCAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GCGCCATGCTCTATCAGAAGCTGCACCACTTTGACATaGCCCTGCCAGGCTGCAGACTGCAAGGCTGAGCGC +
Preference number: 6 (lower is better)
Translates to: APCSIRSCTTLT*PCQAADCKAER
Trigger: GCGCTCAGCCTTGCAGTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp GCGATGCAGAGGGCGGTGGCTCCTTGGTTGCATGTGTaGTCCACCACAGCGCCATGCTCTATCAGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: AMQRAVAPWLHV*STTAPCSIRSC
Trigger: GCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp GACGGTGCCGACTGTGGAGGCTTCTGCTCCATCGTGTaGACAGGGGAAGGGGAGCAGCCATTCAGACTGGAA +
Preference number: 6 (lower is better)
Translates to: DGADCGGFCSIV*TGEGEQPFRLE
Trigger: TTCCAGTCTGAATGGCTGCTCCCCTTCCCCTGTCCACACGATGGAGCAGAAGCCTCCACAGTCGGCACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp ATTCCCAGCGTTGCCGACGAGGGACTGTGCAGTGGCTaGACCCGAACAGCAGCTCCATTTCTCCTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: IPSVADEGLCSG*TRTAAPFLLEA
Trigger: TGCCTCCAGGAGAAATGGAGCTGCTGTTCGGGTCCAGCCACTGCACAGTCCCTCGTCGGCAACGCTGGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS CCA 72 bp GCACCATGTTGTAGCAGGTTCAGGACAATGTCCTCGTaGCCACCCCAGGCTGCTGCACGCAGAGCAGTTCGG +
Preference number: 6 (lower is better)
Translates to: APCCSRFRTMSS*PPQAAARRAVR
Trigger: CCGAACTGCTCTGCGTGCAGCAGCCTGGGGTGGCCACGAGGACATTGTCCTGAACCTGCTACAACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp ATCCACATGTCCCTCCTGGGCTGCGATGCAGAGGGCGGTGGCTCCTaGGTTGCATGTGTGGTCCACCACAGCGCCATGCTCTATCAGAAG +
Preference number: 6 (lower is better)
Translates to: IHMSLLGCDAEGGGS*VACVVHHSAMLYQK
Trigger: CTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGCCACCGCCCTCTGCATCGCAGCCCAGGAGGGACATGTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp GCATGGCAAGCAATAAGTACCCGCACCATCTCCACGTaGCCCTGCCAGCAGGAGACGTGCAGCGCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: AWQAISTRTIST*PCQQETCSAVL
Trigger: AAGGACAGCGCTGCACGTCTCCTGCTGGCAGGGTCACGTGGAGATGGTGCGGGTACTTATTGCTTGCCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GTGTGGTCCACCACAGCGCCATGCTCTATCAGAAGCTaGACCACTTTGACATGGCCCTGCCAGGCTGCAGAC +
Preference number: 6 (lower is better)
Translates to: VWSTTAPCSIRS*TTLTWPCQAAD
Trigger: GTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GTGTGCCCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTaGCCATGGGCGTCTTCGATCTCTAAGTCGGCTCCC +
Preference number: 6 (lower is better)
Translates to: VCPCLAARVSGV*PWASSISKSAP
Trigger: GGGAGCCGACTTAGAGATCGAAGACGCCCATGGGCACACGCCACTCACTCTAGCTGCTAGACAAGGGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GGCTGCTGCACGCAGAGCAGTTCGGCTGTCTGCATCTaGACAGTCTACCTTTACGCCAGCGTAAAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: GCCTQSSSAVCI*TVYLYASVKQG
Trigger: GCCCTGCTTTACGCTGGCGTAAAGGTAGACTGTGCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GCTCTGCTTTCGGGCAGAGCAGAGAAGCAGGAGCCATaGGGGAAAGAACTCGTGGTGACCAGCCAAGAGCTC +
Preference number: 6 (lower is better)
Translates to: ALLSGRAEKQEP*GKELVVTSQEL
Trigger: GAGCTCTTGGCTGGTCACCACGAGTTCTTTCCCCCATGGCTCCTGCTTCTCTGCTCTGCCCGAAAGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 72 bp CCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTGCCCATaGGCGTCTTCGATCTCTAAGTCGGCTCCCCTGGAG +
Preference number: 6 (lower is better)
Translates to: PCLAARVSGVCP*ASSISKSAPLE
Trigger: CTCCAGGGGAGCCGACTTAGAGATCGAAGACGCCCATGGGCACACGCCACTCACTCTAGCTGCTAGACAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp CGTCTCCTTGGTGAGGTGCTGCCGCAGTGCCTCCTCTaGATCCAGGCGGTGGAGGATGTACTGCTGAACATC +
Preference number: 6 (lower is better)
Translates to: RLLGEVLPQCLL*IQAVEDVLLNI
Trigger: GATGTTCAGCAGTACATCCTCCACCGCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTCACCAAGGAGACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp CGTCTCAGCCGTCTCCTTGGTGAGGTGCTGCCGCAGTGCCTCCTCTaGATCCAGGCGGTGGAGGATGTACTGCTGAACATCCTTAACGAT +
Preference number: 6 (lower is better)
Translates to: RLSRLLGEVLPQCLL*IQAVEDVLLNILND
Trigger: ATCGTTAAGGATGTTCAGCAGTACATCCTCCACCGCCTGGATCAAGAGGAGGCACTGCGGCAGCACCTCACCAAGGAGACGGCTGAGACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp ACGGACTGCCTGCTCCTGCTGCGAGGCAGTGAGTGCTaGTGGATCTGCTCCGTGAATGACAGGCTATGGAAA +
Preference number: 6 (lower is better)
Translates to: TDCLLLLRGSEC*WICSVNDRLWK
Trigger: TTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp CGCTCCAGATACAGGAAGCACCCACTGCTCTTGATGTaGAGCTGGTTCAGCGTCTCAGCCGTCTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: RSRYRKHPLLLM*SWFSVSAVSLV
Trigger: CACCAAGGAGACGGCTGAGACGCTGAACCAGCTGCACATCAAGAGCAGTGGGTGCTTCCTGTATCTGGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp ACCCCAGGCTGCTGCACGCAGAGCAGTTCGGCTGTCTaGATCTGCACAGTCTACCTTTACGCCAGCGTAAAG +
Preference number: 6 (lower is better)
Translates to: TPGCCTQSSSAV*ICTVYLYASVK
Trigger: CTTTACGCTGGCGTAAAGGTAGACTGTGCAGATGCAGACAGCCGAACTGCTCTGCGTGCAGCAGCCTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GATAGTCAGAGACTGCATCTTGGACGGTGCCGACTGTaGAGGCTTCTGCTCCATCGTGTGGACAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: DSQRLHLGRCRL*RLLLHRVDRGR
Trigger: CCTTCCCCTGTCCACACGATGGAGCAGAAGCCTCCACAGTCGGCACCGTCCAAGATGCAGTCTCTGACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp GACTGCCTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTaGATCTGCTCCGTGAATGACAGGCTATGGAAACTG +
Preference number: 6 (lower is better)
Translates to: DCLLLLRGSECC*ICSVNDRLWKL
Trigger: CAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAGGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp TGGGAGAATTATGGCTGTGTCCTAAGGACTGGGTTGTaGATGAGGGGGACACGACGGACTGCCTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: WENYGCVLRTGL*MRGTRRTACSC
Trigger: GCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 90 bp CAAACTCACTACTGGGAGAATTATGGCTGTGTCCTAAGGACTGGGTaGTGGATGAGGGGGACACGACGGACTGCCTGCTCCTGCTGCGAG +
Preference number: 6 (lower is better)
Translates to: QTHYWENYGCVLRTG*WMRGTRRTACSCCE
Trigger: CTCGCAGCAGGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 90 bp GCTGTTGACATGAGCACCAGCTCGGATCAGCAGCTGCAGGACCTCTaGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTTGACTGGGGT +
Preference number: 6 (lower is better)
Translates to: AVDMSTSSDQQLQDL*LLGYQGGQGVFDWG
Trigger: ACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGAGGTCCTGCAGCTGCTGATCCGAGCTGGTGCTCATGTCAACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp GCCACCCTCATGGCAGTGCGTCCAAATTGGTCGGCATaGTTGGGATCAGCACCGTGTTCCAGCAAAACCTGC +
Preference number: 6 (lower is better)
Translates to: ATLMAVRPNWSA*LGSAPCSSKTC
Trigger: GCAGGTTTTGCTGGAACACGGTGCTGATCCCAATCATGCCGACCAATTTGGACGCACTGCCATGAGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp TGCTGCGAGGCAGTGAGTGCTGCTGGATCTGCTCCGTaGATGACAGGCTATGGAAACTGTCAATGGGCACCG +
Preference number: 6 (lower is better)
Translates to: CCEAVSAAGSAP*MTGYGNCQWAP
Trigger: CGGTGCCCATTGACAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp GCACCACCTCCACATTCCCCTGTGCCGAAGCTATGCTaGGAACTGTTCTGCCTTCGCTGTCGATGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: APPPHSPVPKLC*ELFCLRCRCCP
Trigger: TGGACAGCATCGACAGCGAAGGCAGAACAGTTCTCAGCATAGCTTCGGCACAGGGGAATGTGGAGGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp TGCACCACTTTGACATGGCCCTGCCAGGCTGCAGACTaGAAGGCTGAGCGCTTCTCATTGTCTGCTGCATTG +
Preference number: 6 (lower is better)
Translates to: CTTLTWPCQAAD*KAERFSLSAAL
Trigger: CAATGCAGCAGACAATGAGAAGCGCTCAGCCTTGCAGTCTGCAGCCTGGCAGGGCCATGTCAAAGTGGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GCTCCTTGGTTGCATGTGTGGTCCACCACAGCGCCATaGTCTATCAGAAGCTGCACCACTTTGACATGGCCC +
Preference number: 6 (lower is better)
Translates to: APWLHVWSTTAP*SIRSCTTLTWP
Trigger: GGGCCATGTCAAAGTGGTGCAGCTTCTGATAGAGCATGGCGCTGTGGTGGACCACACATGCAACCAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp CATCCCCAGGAGTGGGAGCAGCACACACCTTTTAAATaGTTCCGCTGGGTTCCTCTCACACTCTCCAGGCTC +
Preference number: 6 (lower is better)
Translates to: HPQEWEQHTPFK*FRWVPLTLSRL
Trigger: GAGCCTGGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTGCTGCTCCCACTCCTGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS GCA 72 bp GCCACTCGGCAAAGCTGTGGTGAAACAGGATCTTGGTaGTGCCCAAGCCATCCACCAAGAGCTTGGAGAGGA +
Preference number: 6 (lower is better)
Translates to: ATRQSCGETGSW*CPSHPPRAWRG
Trigger: TCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp AGATACAGGAAGCACCCACTGCTCTTGATGTGCAGCTaGTTCAGCGTCTCAGCCGTCTCCTTGGTGAGGTGC +
Preference number: 6 (lower is better)
Translates to: RYRKHPLLLMCS*FSVSAVSLVRC
Trigger: GCACCTCACCAAGGAGACGGCTGAGACGCTGAACCAGCTGCACATCAAGAGCAGTGGGTGCTTCCTGTATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp CCAGAGCTGTTGGACCTGATAGTCAGAGACTGCATCTaGGACGGTGCCGACTGTGGAGGCTTCTGCTCCATC +
Preference number: 6 (lower is better)
Translates to: PELLDLIVRDCI*DGADCGGFCSI
Trigger: GATGGAGCAGAAGCCTCCACAGTCGGCACCGTCCAAGATGCAGTCTCTGACTATCAGGTCCAACAGCTCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp GGCTGCAGATCTCCTCCGCCAGTACCACCAGAGCTGTaGGACCTGATAGTCAGAGACTGCATCTTGGACGGT +
Preference number: 6 (lower is better)
Translates to: GCRSPPPVPPEL*DLIVRDCILDG
Trigger: ACCGTCCAAGATGCAGTCTCTGACTATCAGGTCCAACAGCTCTGGTGGTACTGGCGGAGGAGATCTGCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp TACTGGGAGAATTATGGCTGTGTCCTAAGGACTGGGTaGTGGATGAGGGGGACACGACGGACTGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: YWENYGCVLRTG*WMRGTRRTACS
Trigger: GGAGCAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp GAGAAACTGCGGCTGGGCACGGCTGCTGTCCTGAGATaGAGGGACCACGATTTTACACTGAGATTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: EKLRLGTAAVLR*RDHDFTLRFSW
Trigger: CCAGCTGAATCTCAGTGTAAAATCGTGGTCCCTTCATCTCAGGACAGCAGCCGTGCCCAGCCGCAGTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GAGAATGCCCGTTTTTGGCTGCCACCCTCATGGCAGTaGGTCCAAATTGGTCGGCATGATTGGGATCAGCAC +
Preference number: 6 (lower is better)
Translates to: ENARFWLPPSWQ*VQIGRHDWDQH
Trigger: GTGCTGATCCCAATCATGCCGACCAATTTGGACGCACTGCCATGAGGGTGGCAGCCAAAAACGGGCATTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp CTGCTCCTGCTGCGAGGCAGTGAGTGCTGCTGGATCTaGTCCGTGAATGACAGGCTATGGAAACTGTCAATG +
Preference number: 6 (lower is better)
Translates to: LLLLRGSECCWI*SVNDRLWKLSM
Trigger: CATTGACAGTTTCCATAGCCTGTCATTCACGGAGCAGATCCAGCAGCACTCACTGCCTCGCAGCAGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp TCACTACTGGGAGAATTATGGCTGTGTCCTAAGGACTaGGTTGTGGATGAGGGGGACACGACGGACTGCCTG +
Preference number: 6 (lower is better)
Translates to: SLLGELWLCPKD*VVDEGDTTDCL
Trigger: CAGGCAGTCCGTCGTGTCCCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp GAGTGGGAGCAGCACACACCTTTTAAATGCTTCCGCTaGGTTCCTCTCACACTCTCCAGGCTCGAGGAGACT +
Preference number: 6 (lower is better)
Translates to: EWEQHTPFKCFR*VPLTLSRLEET
Trigger: AGTCTCCTCGAGCCTGGAGAGTGTGAGAGGAACCCAGCGGAAGCATTTAAAAGGTGTGTGCTGCTCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 72 bp GGATCTTGGTGCTGCCCAAGCCATCCACCAAGAGCTTaGAGAGGACGTCTAGCTTGCGCTGAAAGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: GSWCCPSHPPRA*RGRLACAESLP
Trigger: TGGAAGACTTTCAGCGCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp AGAGCCACTCGGCAAAGCTGTGGTGAAACAGGATCTTaGTGCTGCCCAAGCCATCCACCAAGAGCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: RATRQSCGETGS*CCPSHPPRAWR
Trigger: TCTCCAAGCTCTTGGTGGATGGCTTGGGCAGCACCAAGATCCTGTTTCACCACAGCTTTGCCGAGTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GCCCATGGGCGTCTTCGATCTCTAAGTCGGCTCCCCTaGAGACAAGCAAATTCACAACATCCAGACTGCCAC +
Preference number: 6 (lower is better)
Translates to: AHGRLRSLSRLP*RQANSQHPDCH
Trigger: GTGGCAGTCTGGATGTTGTGAATTTGCTTGTCTCCAGGGGAGCCGACTTAGAGATCGAAGACGCCCATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp GTTTTTGGCTGCCACCCTCATGGCAGTGCGTCCAAATaGGTCGGCATGATTGGGATCAGCACCGTGTTCCAG +
Preference number: 6 (lower is better)
Translates to: VFGCHPHGSASK*VGMIGISTVFQ
Trigger: CTGGAACACGGTGCTGATCCCAATCATGCCGACCAATTTGGACGCACTGCCATGAGGGTGGCAGCCAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp ATGAGCACCAGCTCGGATCAGCAGCTGCAGGACCTCTaGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: MSTSSDQQLQDL*LLGYQGGQGVF
Trigger: AAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGAGGTCCTGCAGCTGCTGATCCGAGCTGGTGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp GCAGCTATGAGTGCAGTCCTCCCTTCGTTGTCCGCTTaGTTGACCTCGGCACCATGTTGTAGCAGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: AAMSAVLPSLSA*LTSAPCCSRFR
Trigger: CCTGAACCTGCTACAACATGGTGCCGAGGTCAACAAAGCGGACAACGAAGGGAGGACTGCACTCATAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp CTGTGGCCCATATATGCTGCAGCTATGAGTGCAGTCCTCCCTTCGTaGTCCGCTTTGTTGACCTCGGCACCATGTTGTAGCAGGTTCAGG +
Preference number: 6 (lower is better)
Translates to: LWPIYAAAMSAVLPS*SALLTSAPCCSRFR
Trigger: CCTGAACCTGCTACAACATGGTGCCGAGGTCAACAAAGCGGACAACGAAGGGAGGACTGCACTCATAGCTGCAGCATATATGGGCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp AATGACAGGCTATGGAAACTGTCAATGGGCACCGTCTaGGCCGTGGCTGTGGAGGACGTCGTTCTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: NDRLWKLSMGTV*AVAVEDVVLRD
Trigger: ATCTCTGAGAACGACGTCCTCCACAGCCACGGCTCAGACGGTGCCCATTGACAGTTTCCATAGCCTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp CCTTCTGCAGCGTTACACAGGTATTTCTGGGTGCAGTaGTTCACATCCAAGAGCCACTCGGCAAAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: PSAALHRYFWVQ*FTSKSHSAKLW
Trigger: CCACAGCTTTGCCGAGTGGCTCTTGGATGTGAAGCACTGCACCCAGAAATACCTGTGTAACGCTGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp CTCCCCTGGAGACAAGCAAATTCACAACATCCAGACTaGCACTGTATGCGGCATTGGCCAGCAGAGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LPWRQANSQHPD*HCMRHWPAEFS
Trigger: GGAGAACTCTGCTGGCCAATGCCGCATACAGTGGCAGTCTGGATGTTGTGAATTTGCTTGTCTCCAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp CAGCAGGTGCTCTACGATCTCTCTGTGGCCCATATATaGTGCAGCTATGAGTGCAGTCCTCCCTTCGTTGTC +
Preference number: 6 (lower is better)
Translates to: QQVLYDLSVAHI*CSYECSPPFVV
Trigger: GACAACGAAGGGAGGACTGCACTCATAGCTGCAGCATATATGGGCCACAGAGAGATCGTAGAGCACCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp GCTATGAGTGCAGTCCTCCCTTCGTTGTCCGCTTTGTaGACCTCGGCACCATGTTGTAGCAGGTTCAGGACA +
Preference number: 6 (lower is better)
Translates to: AMSAVLPSLSAL*TSAPCCSRFRT
Trigger: TGTCCTGAACCTGCTACAACATGGTGCCGAGGTCAACAAAGCGGACAACGAAGGGAGGACTGCACTCATAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp CCTCTGATAAACCCTCCAACACACAAAGTGTCTGAGTCCTGGGCTTaGCAGAAGTGGAAAGCCAAAGCCTGGCGATGCAGACCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: PLINPPTHKVSESWA*QKWKAKAWRCRPLC
Trigger: GCAGAGAGGTCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTTTATCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CAA 90 bp TGCAGGACCTCTTGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTaGACTGGGGTACCATTCCATATCATCCACAGAGCCAGTTCGGCT +
Preference number: 6 (lower is better)
Translates to: CRTSCSLGIKVDRES*TGVPFHIIHRASSA
Trigger: AGCCGAACTGGCTCTGTGGATGATATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGAGGTCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp TATGCTGCAGCTATGAGTGCAGTCCTCCCTTCGTTGTCCGCTTTGTaGACCTCGGCACCATGTTGTAGCAGGTTCAGGACAATGTCCTCG +
Preference number: 6 (lower is better)
Translates to: YAAAMSAVLPSLSAL*TSAPCCSRFRTMSS
Trigger: CGAGGACATTGTCCTGAACCTGCTACAACATGGTGCCGAGGTCAACAAAGCGGACAACGAAGGGAGGACTGCACTCATAGCTGCAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp GGCCGGCAGGCTGCCAGGATCACGTTCAGAATGGGCTaGACTTTGGCAAACTGTTTTCGGACAAAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: GRQAARITFRMG*TLANCFRTKSL
Trigger: GAGACTTTTTGTCCGAAAACAGTTTGCCAAAGTTCAGCCCATTCTGAACGTGATCCTGGCAGCCTGCCGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GCTCCACACCCAATTAGACAGTTAACCACCTTTGTGTaGCCTTGTCTAGCAGCTAGAGTGAGTGGCGTGTGC +
Preference number: 6 (lower is better)
Translates to: APHPIRQLTTFV*PCLAARVSGVC
Trigger: GCACACGCCACTCACTCTAGCTGCTAGACAAGGGCACACAAAGGTGGTTAACTGTCTAATTGGGTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GGCTATGGAAACTGTCAATGGGCACCGTCTGAGCCGTaGCTGTGGAGGACGTCGTTCTCAGAGATGAATTTT +
Preference number: 6 (lower is better)
Translates to: GYGNCQWAPSEP*LWRTSFSEMNF
Trigger: AAAATTCATCTCTGAGAACGACGTCCTCCACAGCCACGGCTCAGACGGTGCCCATTGACAGTTTCCATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp TCAGGGGCCGGCAGGCTGCCAGGATCACGTTCAGAATaGGCTGAACTTTGGCAAACTGTTTTCGGACAAAAA +
Preference number: 6 (lower is better)
Translates to: SGAGRLPGSRSE*AELWQTVFGQK
Trigger: TTTTTGTCCGAAAACAGTTTGCCAAAGTTCAGCCCATTCTGAACGTGATCCTGGCAGCCTGCCGGCCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp ATCCTGTGTCCTTCTGCAGCGTTACACAGGTATTTCTaGGTGCAGTGCTTCACATCCAAGAGCCACTCGGCA +
Preference number: 6 (lower is better)
Translates to: ILCPSAALHRYF*VQCFTSKSHSA
Trigger: TGCCGAGTGGCTCTTGGATGTGAAGCACTGCACCCAGAAATACCTGTGTAACGCTGCAGAAGGACACAGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp GACTGCAAGGCTGAGCGCTTCTCATTGTCTGCTGCATaGACATCTGCATGGCAAGCAATAAGTACCCGCACC +
Preference number: 6 (lower is better)
Translates to: DCKAERFSLSAA*TSAWQAISTRT
Trigger: GGTGCGGGTACTTATTGCTTGCCATGCAGATGTCAATGCAGCAGACAATGAGAAGCGCTCAGCCTTGCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp AACCCTCCAACACACAAAGTGTCTGAGTCCTGGGCTTaGCAGAAGTGGAAAGCCAAAGCCTGGCGATGCAGA +
Preference number: 6 (lower is better)
Translates to: NPPTHKVSESWA*QKWKAKAWRCR
Trigger: TCTGCATCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CAA 72 bp CTCCAGCAGGATCTGTACACAGTCATAATGGCCCTCTaGGGAGGCCAAAATGAAGGGGATGCGCCCATCATT +
Preference number: 6 (lower is better)
Translates to: LQQDLYTVIMAL*GGQNEGDAPII
Trigger: AATGATGGGCGCATCCCCTTCATTTTGGCCTCCCAAGAGGGCCATTATGACTGTGTACAGATCCTGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp ATATATGCTGCAGCTATGAGTGCAGTCCTCCCTTCGTTGTCCGCTTaGTTGACCTCGGCACCATGTTGTAGCAGGTTCAGGACAATGTCC +
Preference number: 6 (lower is better)
Translates to: IYAAAMSAVLPSLSA*LTSAPCCSRFRTMS
Trigger: GGACATTGTCCTGAACCTGCTACAACATGGTGCCGAGGTCAACAAAGCGGACAACGAAGGGAGGACTGCACTCATAGCTGCAGCATATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GAGCTTTTCAGAGAATTGTTGGACAGGGATGACTTTTaGCGATCCACGGTCGAGTCTGGAGACTCTGACGGA +
Preference number: 6 (lower is better)
Translates to: ELFRELLDRDDF*RSTVESGDSDG
Trigger: TCCGTCAGAGTCTCCAGACTCGACCGTGGATCGGCAAAAGTCATCCCTGTCCAACAATTCTCTGAAAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp TTCCATCTGGCAGCTGAGCGGCTCCTCCAACCACAATaGCTTCTGTCTCATACAACTGGAACCACTGAACAT +
Preference number: 6 (lower is better)
Translates to: FHLAAERLLQPQ*LLSHTTGTTEH
Trigger: ATGTTCAGTGGTTCCAGTTGTATGAGACAGAAGGCATTGTGGTTGGAGGAGCCGCTCAGCTGCCAGATGGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000120875.8
CDS CCA 72 bp ACCTGGCTCCATTCAAACTCACTACTGGGAGAATTATaGCTGTGTCCTAAGGACTGGGTTGTGGATGAGGGG +
Preference number: 6 (lower is better)
Translates to: TWLHSNSLLGEL*LCPKDWVVDEG
Trigger: CCCCTCATCCACAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGTTTGAATGGAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp CTGATAAACCCTCCAACACACAAAGTGTCTGAGTCCTaGGCTTTGCAGAAGTGGAAAGCCAAAGCCTGGCGA +
Preference number: 6 (lower is better)
Translates to: LINPPTHKVSES*ALQKWKAKAWR
Trigger: TCGCCAGGCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTTTATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS CCA 72 bp TATTTTTGGTCCACACAGCATGGTATAATTCTGTCATaGTCAGGGGCCGGCAGGCTGCCAGGATCACGTTCA +
Preference number: 6 (lower is better)
Translates to: YFWSTQHGIILS*SGAGRLPGSRS
Trigger: TGAACGTGATCCTGGCAGCCTGCCGGCCCCTGACCATGACAGAATTATACCATGCTGTGTGGACCAAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp CTCCTTGGGTATCAAGGTGGACAGGGAGTCTTTGACTaGGGTACCATTCCATATCATCCACAGAGCCAGTTC +
Preference number: 6 (lower is better)
Translates to: LLGYQGGQGVFD*GTIPYHPQSQF
Trigger: GAACTGGCTCTGTGGATGATATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp TCTTGCTCCTTGGGTATCAAGGTGGACAGGGAGTCTTaGACTGGGGTACCATTCCATATCATCCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: SCSLGIKVDRES*TGVPFHIIHRA
Trigger: GGCTCTGTGGATGATATGGAATGGTACCCCAGTCAAAGACTCCCTGTCCACCTTGATACCCAAGGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp GGATTTGTTCTCCAGCAGGATCTGTACACAGTCATAATGGCCCTCTaGGGAGGCCAAAATGAAGGGGATGCGCCCATCATTGTCTATCTC +
Preference number: 6 (lower is better)
Translates to: GFVLQQDLYTVIMAL*GGQNEGDAPIIVYL
Trigger: GAGATAGACAATGATGGGCGCATCCCCTTCATTTTGGCCTCCCAAGAGGGCCATTATGACTGTGTACAGATCCTGCTGGAGAACAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp CAGACCTCTGATAAACCCTCCAACACACAAAGTGTCTaGGTCCTGGGCTTTGCAGAAGTGGAAAGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: QTSDKPSNTQSV*VLGFAEVESQS
Trigger: GCTTTGGCTTTCCACTTCTGCAAAGCCCAGGACTCAGACACTTTGTGTGTTGGAGGGTTTATCAGAGGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000120875.8
ENSMUST00000156038.2
CDS TCA 72 bp TGGCCAGCAGAGTTCTCCCATTGGAATCACACTGATTaGCAGAGGCTCCGTTATCCAGTAAAGTCCGAATGG +
Preference number: 6 (lower is better)
Translates to: WPAEFSHWNHTD*QRLRYPVKSEW
Trigger: CCATTCGGACTTTACTGGATAACGGAGCCTCTGTCAATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp GCATTGGCCAGCAGAGTTCTCCCATTGGAATCACACTaGTTGACAGAGGCTCCGTTATCCAGTAAAGTCCGA +
Preference number: 6 (lower is better)
Translates to: ALASRVLPLESH*LTEAPLSSKVR
Trigger: TCGGACTTTACTGGATAACGGAGCCTCTGTCAATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp TCCCAGCCGACCCAGACTTGCTGGAGTTGTCTGACTTaGCTCCTTTATTTGACTTTGTTGACTTCAGACTCG +
Preference number: 6 (lower is better)
Translates to: SQPTQTCWSCLT*LLYLTLLTSDS
Trigger: CGAGTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS GCA 72 bp GACAAGCAAATTCACAACATCCAGACTGCCACTGTATaGGGCATTGGCCAGCAGAGTTCTCCCATTGGAATC +
Preference number: 6 (lower is better)
Translates to: DKQIHNIQTATV*GIGQQSSPIGI
Trigger: GATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCATACAGTGGCAGTCTGGATGTTGTGAATTTGCTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp GACTCGGTTTCACCTGGCTCCATTCAAACTCACTACTaGGAGAATTATGGCTGTGTCCTAAGGACTGGGTTG +
Preference number: 6 (lower is better)
Translates to: DSVSPGSIQTHY*ENYGCVLRTGL
Trigger: CAACCCAGTCCTTAGGACACAGCCATAATTCTCCCAGTAGTGAGTTTGAATGGAGCCAGGTGAAACCGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp GATTTTACACTGAGATTCAGCTGGCGTCTGTTTAGGTaGGCTACTCCCAGACTTGGCAACAGGTCCCCTTTT +
Preference number: 6 (lower is better)
Translates to: DFTLRFSWRLFR*ATPRLGNRSPF
Trigger: AAAAGGGGACCTGTTGCCAAGTCTGGGAGTAGCCCACCTAAACAGACGCCAGCTGAATCTCAGTGTAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp CCACAGAGCCAGTTCGGCTGGCTCCAGCTGCAAGTTTaGATTAATCAAGTGCAAGGCAAATTCTTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: PQSQFGWLQLQV*INQVQGKFLCF
Trigger: GAAGCACAAGAATTTGCCTTGCACTTGATTAATTCAAACTTGCAGCTGGAGCCAGCCGAACTGGCTCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS TCA 72 bp GTACACAGTCATAATGGCCCTCTTGGGAGGCCAAAATaGAGGGGATGCGCCCATCATTGTCTATCTCATTTG +
Preference number: 6 (lower is better)
Translates to: VHSHNGPLGRPK*RGCAHHCLSHL
Trigger: CAAATGAGATAGACAATGATGGGCGCATCCCCTTCATTTTGGCCTCCCAAGAGGGCCATTATGACTGTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp AGGCTGCCAGGATCACGTTCAGAATGGGCTGAACTTTaGCAAACTGTTTTCGGACAAAAAGTCTCTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RLPGSRSEWAEL*QTVFGQKVSGR
Trigger: TCTGCCAGAGACTTTTTGTCCGAAAACAGTTTGCCAAAGTTCAGCCCATTCTGAACGTGATCCTGGCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp TCCAAGGTTAGAGACATATTTTTGGTCCACACAGCATaGTATAATTCTGTCATGGTCAGGGGCCGGCAGGCT +
Preference number: 6 (lower is better)
Translates to: SKVRDIFLVHTA*YNSVMVRGRQA
Trigger: AGCCTGCCGGCCCCTGACCATGACAGAATTATACCATGCTGTGTGGACCAAAAATATGTCTCTAACCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp AATTCACAACATCCAGACTGCCACTGTATGCGGCATTaGCCAGCAGAGTTCTCCCATTGGAATCACACTGAT +
Preference number: 6 (lower is better)
Translates to: NSQHPDCHCMRH*PAEFSHWNHTD
Trigger: ATCAGTGTGATTCCAATGGGAGAACTCTGCTGGCCAATGCCGCATACAGTGGCAGTCTGGATGTTGTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CCA 72 bp TTGTCAGCTGGTTTTCTAAGGCCAATATGTAAAGCGTaGGCCGCCCGTCAGCATCTTTGTAGTTCACATCAG +
Preference number: 6 (lower is better)
Translates to: LSAGFLRPICKA*AARQHLCSSHQ
Trigger: CTGATGTGAACTACAAAGATGCTGACGGGCGGCCCACGCTTTACATATTGGCCTTAGAAAACCAGCTGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp TTAGCCTTCTTCCCAGCCGACCCAGACTTGCTGGAGTaGTCTGACTTGCCTCCTTTATTTGACTTTGTTGAC +
Preference number: 6 (lower is better)
Translates to: LAFFPADPDLLE*SDLPPLFDFVD
Trigger: GTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTGGGAAGAAGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 90 bp TGTGAGGAGCTATTCTGTTTAGCCTTCTTCCCAGCCGACCCAGACTaGCTGGAGTTGTCTGACTTGCCTCCTTTATTTGACTTTGTTGAC +
Preference number: 6 (lower is better)
Translates to: CEELFCLAFFPADPD*LELSDLPPLFDFVD
Trigger: GTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTGGGAAGAAGGCTAAACAGAATAGCTCCTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 90 bp CTATTCTGTTTAGCCTTCTTCCCAGCCGACCCAGACTTGCTGGAGTaGTCTGACTTGCCTCCTTTATTTGACTTTGTTGACTTCAGACTC +
Preference number: 6 (lower is better)
Translates to: LFCLAFFPADPDLLE*SDLPPLFDFVDFRL
Trigger: GAGTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTGGGTCGGCTGGGAAGAAGGCTAAACAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp CTCCCAGACTTGGCAACAGGTCCCCTTTTGTCAAACTaGGTCATTTCATACTCTAGAACCTTTGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: LPDLATGPLLSN*VISYSRTFGCE
Trigger: CTCACAGCCAAAGGTTCTAGAGTATGAAATGACTCAGTTTGACAAAAGGGGACCTGTTGCCAAGTCTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS TCA 72 bp TCCACCAAGAGCTTGGAGAGGACGTCTAGCTTGCGCTaGAAGTCTTCCAAGGTTAGAGACATATTTTTGGTC +
Preference number: 6 (lower is better)
Translates to: STKSLERTSSLR*KSSKVRDIFLV
Trigger: GACCAAAAATATGTCTCTAACCTTGGAAGACTTTCAGCGCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp GTGGAGGATGTACTGCTGAACATCCTTAACGATATATaGCTTCCGCAGGTCATCCAAACTGATCTTCCGGAA +
Preference number: 6 (lower is better)
Translates to: VEDVLLNILNDI*LPQVIQTDLPE
Trigger: TTCCGGAAGATCAGTTTGGATGACCTGCGGAAGGCATATATCGTTAAGGATGTTCAGCAGTACATCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS GCA 72 bp AGCCATCCACCAAGAGCTTGGAGAGGACGTCTAGCTTaGGCTGAAAGTCTTCCAAGGTTAGAGACATATTTT +
Preference number: 6 (lower is better)
Translates to: SHPPRAWRGRLA*AESLPRLETYF
Trigger: AAAATATGTCTCTAACCTTGGAAGACTTTCAGCGCAAGCTAGACGTCCTCTCCAAGCTCTTGGTGGATGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 90 bp CAGACTTGCTGGAGTTGTCTGACTTGCCTCCTTTATTTGACTTTGTaGACTTCAGACTCGGTTTCACCTGGCTCCATTCAAACTCACTAC +
Preference number: 6 (lower is better)
Translates to: QTCWSCLTCLLYLTL*TSDSVSPGSIQTHY
Trigger: GTAGTGAGTTTGAATGGAGCCAGGTGAAACCGAGTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCAGCAAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp ATGCATTTCTCCCATCATAGCCTCGTTGATCGATGTTaGATTTGTTCTCCAGCAGGATCTGTACACAGTCAT +
Preference number: 6 (lower is better)
Translates to: MHFSHHSLVDRC*ICSPAGSVHSH
Trigger: ATGACTGTGTACAGATCCTGCTGGAGAACAAATCCAACATCGATCAACGAGGCTATGATGGGAGAAATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000156038.2
CDS CAA 72 bp TGGCTGTGGAGGACGTCGTTCTCAGAGATGAATTTTTaGAGCTTTTCAGAGAATTGTTGGACAGGGATGACT +
Preference number: 6 (lower is better)
Translates to: WLWRTSFSEMNF*SFSENCWTGMT
Trigger: AGTCATCCCTGTCCAACAATTCTCTGAAAAGCTCAAAAAATTCATCTCTGAGAACGACGTCCTCCACAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CAA 72 bp TGGAGTTGTCTGACTTGCCTCCTTTATTTGACTTTGTaGACTTCAGACTCGGTTTCACCTGGCTCCATTCAA +
Preference number: 6 (lower is better)
Translates to: WSCLTCLLYLTL*TSDSVSPGSIQ
Trigger: TTGAATGGAGCCAGGTGAAACCGAGTCTGAAGTCAACAAAGTCAAATAAAGGAGGCAAGTCAGACAACTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2
CDS CCA 72 bp TTATTTGACTTTGTTGACTTCAGACTCGGTTTCACCTaGCTCCATTCAAACTCACTACTGGGAGAATTATGG +
Preference number: 6 (lower is better)
Translates to: LFDFVDFRLGFT*LHSNSLLGELW
Trigger: CCATAATTCTCCCAGTAGTGAGTTTGAATGGAGCCAGGTGAAACCGAGTCTGAAGTCAACAAAGTCAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000094300.4
ENSMUST00000156038.2