Pregenerated sensors for ANKRD46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048307Ensembl transcript IDs: ENSMUST00000057486.9
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTaGCCAGACAGGTGGCCAGGGGTGCCTTTGCTAGAGAAAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: RGEDTSSERLAEGPL*PDRWPGVPLLEKRE Trigger: TTCTCTTTTCTCTAGCAAAGGCACCCCTGGCCACCTGTCTGGGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 90 bp | ACTCTGTACTCAGAAATGCTCCCCCATCCACTGCTGAACTCCTGCTaGCCTGAATGTGTCCCTTCAGACAAACGGTTAACTGTGGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: TLYSEMLPHPLLNSC*PECVPSDKRLTVVS Trigger: GCTCACCACAGTTAACCGTTTGTCTGAAGGGACACATTCAGGTCAGCAGGAGTTCAGCAGTGGATGGGGGAGCATTTCTGAGTACAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 90 bp | TATAAATGCATTTATTGGAAGCAGTTAAATGCAGTGTGGAACACATaGTGCACAGAAACCAGTGCTGGGCAGGAAGCAGGGATCGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: YKCIYWKQLNAVWNT*CTETSAGQEAGIVE Trigger: CTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTGCATCATGTGTTCCACACTGCATTTAACTGCTTCCAATAAATGCATTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR CCA 90 bp | GCAGTTAAATGCAGTGTGGAACACATGATGCACAGAAACCAGTGCTaGGCAGGAAGCAGGGATCGTAGAGGCAAAATATTTACATATTAC | + |
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Preference number: 1 (lower is better) Translates to: AVKCSVEHMMHRNQC*AGSRDRRGKIFTYY Trigger: GTAATATGTAAATATTTTGCCTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTGCATCATGTGTTCCACACTGCATTTAACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 90 bp | TATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTGAGAAGCTATaGCATAGGGTCCAGATTCCTATTCATTATGTGAATGCACCTGTA | + |
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Preference number: 1 (lower is better) Translates to: YTTEAKRAFRDAEKL*HRVQIPIHYVNAPV Trigger: TACAGGTGCATTCACATAATGAATAGGAATCTGGACCCTATGTCATAGCTTCTCAGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 90 bp | CATGTCAGAGAGAAGACTGCTCGCTTTCCAAACCTGTCTACTATCTaGCTACATACTTTTAAAGTCAAAATTCCTAACAGTTCTAATTTG | + |
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Preference number: 1 (lower is better) Translates to: HVREKTARFPNLSTI*LHTFKVKIPNSSNL Trigger: CAAATTAGAACTGTTAGGAATTTTGACTTTAAAAGTATGTAGTCAGATAGTAGACAGGTTTGGAAAGCGAGCAGTCTTCTCTCTGACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTGGTCGGGCCCCACTGTaGGGCCTCCCAAGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: HKKHGFYTTEAKRAFRDAGRAPL*GLPSLC Trigger: GCAGAGGCTTGGGAGGCCTCACAGTGGGGCCCGACC...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR CAA 90 bp | CTTGCAGAAGGGCCACTTTGCCCAGACAGGTGGCCAGGGGTGCCTTaGCTAGAGAAAAGAGAACCGTTAGCCCTTCACTGCAAGTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LAEGPLCPDRWPGVP*LEKREPLALHCKFQ Trigger: TTGAAACTTGCAGTGAAGGGCTAACGGTTCTCTTTTCTCTAGCAAAGGCACCCCTGGCCACCTGTCTGGGCAAAGTGGCCCTTCTGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGAAACCAGTGCTGGGCAGGAAGCAGGGATCGTAGAGGCAAAATATTTACACCCAAGCCTCTGCCTTaGGTGTCCACCTGGTTATCA | + |
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Preference number: 2 (lower is better) Translates to: HRNQCWAGSRDRRGKIFTPKPLP*VSTWLS Trigger: TGATAACCAGGTGGACACTCAAGGCAGAGGCTTGGG...TGTAAATATTTTGCCTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR GCA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTGGCCTCCCAAGCCTCTaGCTTGAGTGTCCACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: HKKHGFYTTEAKRAFRDAGLPSL*LECPPG Trigger: ACCAGGTGGACACTCAAGGCAGAGGCTTGGGAGGCC...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTTCCCCCATCCACTGCTaGACTCCTGCTGACCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HKKHGFYTTEAKRAFRDASPIHC*TPADLN Trigger: ATTCAGGTCAGCAGGAGTTCAGCAGTGGATGGGGGA...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGCAGAGTATCGTCCAGGACTCTGTACTCAGAAATGCTCCCCCATCCAAAAGCCACTGGCAAATaGAATCCTAGAAAAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: SSSRVSSRTLYSEMLPHPKATGK*NPRKRN Trigger: ATTTCTTTTTCTAGGATTCCATTTGCCAGTGGCTTT...TGGATGGGGGAGCATTTCTGAGTACAGAGTCCTGGACGATACTCTGCTGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCCTACAAAGAATTTCCTaGTATTTTTCTGAATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: KAEEKIPVARGLQKGHFALQRIS*YFSEWD Trigger: GTCCCATTCAGAAAAATACCAGGAAATTCTTTGTAG...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACATTCAAAACTGCTCCATaGCAACTAAACCCTGATCGG | + |
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Preference number: 2 (lower is better) Translates to: KARHCKLILKQPVKTCKTFKTAP*QLNPDR Trigger: CCGATCAGGGTTTAGTTGCCATGGAGCAGTTTTGAA...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACAGCAATCAGTTTACACTaGTTCAAAACTGCTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: KARHCKLILKQPVKTCKTAISLH*FKTAPW Trigger: CCATGGAGCAGTTTTGAATCAGTGTAAACTGATTGC...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACAGAGGAGACTGAAGAGTaGGCTGAACTCATAAAACAT | + |
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Preference number: 2 (lower is better) Translates to: KARHCKLILKQPVKTCKTEETEE*AELIKH Trigger: ATGTTTTATGAGTTCAGCTCACTCTTCAGTCTCCTC...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTTTCCTATTCATTATGTaGATGCACCTGTACACAGGG | + |
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Preference number: 2 (lower is better) Translates to: HKKHGFYTTEAKRAFRDAFLFIM*MHLYTG Trigger: CCCTGTGTACAGGTGCATTCACATAATGAATAGGAA...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR GCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACACCGTTAGCCCTTCACTaGAAGTTTCAAATTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: KARHCKLILKQPVKTCKTPLALH*KFQILL Trigger: GAGTAAAATTTGAAACTTGCAGTGAAGGGCTAACGG...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCCAGTGAAGACCTGTAAAACAGTTCCTTCAGACAGGATAAAGCCACCTGAACTCATAAAACATTaGTTTTCAGACACTGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: KQPVKTCKTVPSDRIKPPELIKH*FSDTAS Trigger: GCTTGCAGTGTCTGAAAACCAATGTTTTATGAGTTC...AGGTGGCTTTATCCTGTCTGAAGGAACTGTTTTACAGGTCTTCACTGGCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACATTCCTGGTATTTTTCTaGATGGGACATCTCAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: KARHCKLILKQPVKTCKTFLVFF*MGHLKS Trigger: ACTTTTGAGATGTCCCATTCAGAAAAATACCAGGAA...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAGAAAAGTGTCAGGGCTATGTATCTGAAAGCAGAGGAGAAGATACCAGTTATTCATTATGTGAATaGACCTGTACACAGGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LKEKCQGYVSESRGEDTSYSLCE*TCTQGR Trigger: TCTTCCCTGTGTACAGGTGCATTCACATAATGAATA...ACTGGTATCTTCTCCTCTGCTTTCAGATACATAGCCCTGACACTTTTCTTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGAACCGTTAGCCCTTCACTGCAAGTTTCAAATTTTACTCATTATTAAACCTAAAACAGAATACTATTaGAAAAGGAACAAACGAGGG | + |
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Preference number: 2 (lower is better) Translates to: REPLALHCKFQILLIIKPKTEYY*KRNKRG Trigger: CCCTCGTTTGTTCCTTTTGCAATAGTATTCTGTTTT...AGGTTTAATAATGAGTAAAATTTGAAACTTGCAGTGAAGGGCTAACGGTTCTCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCAGCAGAGTATCGTCCAGGACTCTGTACTCAGAAATGCTCCCCCATCCAGTGGCACTCCTGAGTTaGGTGACAATGAAGGACAGG | + |
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Preference number: 3 (lower is better) Translates to: SSSRVSSRTLYSEMLPHPVALLS*VTMKDR Trigger: CCTGTCCTTCATTGTCACCAAACTCAGGAGTGCCAC...TGGATGGGGGAGCATTTCTGAGTACAGAGTCCTGGACGATACTCTGCTGCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 72 bp | GGACTCTGTACTCAGAAATGCTCCCCCATCCACTGCTaGACTCCTGCTGACCTGAATGTGTCCCTTCAGACA | + |
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Preference number: 3 (lower is better) Translates to: GLCTQKCSPIHC*TPADLNVSLQT Trigger: TGTCTGAAGGGACACATTCAGGTCAGCAGGAGTTCAGCAGTGGATGGGGGAGCATTTCTGAGTACAGAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACACCAGTAGCGAGAGGCTaGCAGAAGGGCCACTTTGCC | + |
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Preference number: 3 (lower is better) Translates to: KARHCKLILKQPVKTCKTPVARG*QKGHFA Trigger: GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGG...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 72 bp | TCAGAAATGCTCCCCCATCCACTGCTGAACTCCTGCTaGCCTGAATGTGTCCCTTCAGACAAACGGTTAACT | + |
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Preference number: 3 (lower is better) Translates to: SEMLPHPLLNSC*PECVPSDKRLT Trigger: AGTTAACCGTTTGTCTGAAGGGACACATTCAGGTCAGCAGGAGTTCAGCAGTGGATGGGGGAGCATTTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR GCA 72 bp | AAATGCAGTGTGGAACACATGATGCACAGAAACCAGTaGTGGGCAGGAAGCAGGGATCGTAGAGGCAAAATA | + |
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Preference number: 3 (lower is better) Translates to: KCSVEHMMHRNQ*WAGSRDRRGKI Trigger: TATTTTGCCTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTGCATCATGTGTTCCACACTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR CCA 72 bp | TGCAGTGTGGAACACATGATGCACAGAAACCAGTGCTaGGCAGGAAGCAGGGATCGTAGAGGCAAAATATTT | + |
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Preference number: 3 (lower is better) Translates to: CSVEHMMHRNQC*AGSRDRRGKIF Trigger: AAATATTTTGCCTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTGCATCATGTGTTCCACACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTTGGTTATCACCACACTaGGGTCACACAAGCCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: HKKHGFYTTEAKRAFRDAWLSPH*GHTSLG Trigger: CCCCAGGCTTGTGTGACCCAAGTGTGGTGATAACCA...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CAA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTTCCCAAGCCTCTGCCTaGAGTGTCCACCTGGTTATC | + |
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Preference number: 3 (lower is better) Translates to: HKKHGFYTTEAKRAFRDASQASA*SVHLVI Trigger: GATAACCAGGTGGACACTCAAGGCAGAGGCTTGGGA...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACATGGCCAGGGGTGCCTTaGCTAGAGAAAAGAGAACCG | + |
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Preference number: 3 (lower is better) Translates to: KARHCKLILKQPVKTCKTWPGVP*LEKREP Trigger: CGGTTCTCTTTTCTCTAGCAAAGGCACCCCTGGCCA...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 72 bp | ATTTATTGGAAGCAGTTAAATGCAGTGTGGAACACATaGTGCACAGAAACCAGTGCTGGGCAGGAAGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: IYWKQLNAVWNT*CTETSAGQEAG Trigger: CCCTGCTTCCTGCCCAGCACTGGTTTCTGTGCATCATGTGTTCCACACTGCATTTAACTGCTTCCAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR TCA 72 bp | GAGAAGACTGCTCGCTTTCCAAACCTGTCTACTATCTaGCTACATACTTTTAAAGTCAAAATTCCTAACAGT | + |
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Preference number: 3 (lower is better) Translates to: EKTARFPNLSTI*LHTFKVKIPNS Trigger: ACTGTTAGGAATTTTGACTTTAAAAGTATGTAGTCAGATAGTAGACAGGTTTGGAAAGCGAGCAGTCTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR GCA 72 bp | CCTTTGCTAGAGAAAAGAGAACCGTTAGCCCTTCACTaGAAGTTTCAAATTTTACTCATTATTAAACCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PLLEKREPLALH*KFQILLIIKPP Trigger: TGGAGGTTTAATAATGAGTAAAATTTGAAACTTGCAGTGAAGGGCTAACGGTTCTCTTTTCTCTAGCAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR TCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCCGGGCCGCGGCGAGGTaGAGGCCCGTTCTGCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KAEEKIPVARGLQKGHFARAAAR*RPVLPL Trigger: CAGAGGCAGAACGGGCCTTCACCTCGCCGCGGCCCG...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR CAA 72 bp | GGGCCACTTTGCCCAGACAGGTGGCCAGGGGTGCCTTaGCTAGAGAAAAGAGAACCGTTAGCCCTTCACTGC | + |
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Preference number: 4 (lower is better) Translates to: GPLCPDRWPGVP*LEKREPLALHC Trigger: GCAGTGAAGGGCTAACGGTTCTCTTTTCTCTAGCAAAGGCACCCCTGGCCACCTGTCTGGGCAAAGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| 3UTR CAA 72 bp | CTGAAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTaGCAGAAGGGCCACTTTGCCCAGACAGGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LKAEEKIPVARG*QKGHFAQTGGQ Trigger: CTGGCCACCTGTCTGGGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR GCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCGTCTCCAGCTTCGAGTaGGCGCCTCTGTTAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: KAEEKIPVARGLQKGHFAVSSFE*APLLNP Trigger: GGGATTTAACAGAGGCGCGCACTCGAAGCTGGAGAC...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR GCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCTCTTCCACAAACTCCTaGCACGTGGTTCGGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KAEEKIPVARGLQKGHFASSTNS*HVVRKL Trigger: CAGCTTCCGAACCACGTGGCAGGAGTTTGTGGAAGA...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCTCCCCTGGTAATCTGTaGCCAGTGGATCAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: KAEEKIPVARGLQKGHFASPGNL*PVDQLQ Trigger: TTGGAGCTGATCCACTGGCCACAGATTACCAGGGGA...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR GCA 90 bp | AAACAGCCAGTGAAGACCTGTAAAACAGTTCCTTCAGACAGGATAAAGCCACCTAGGACGCCTTCGCCTTaGTGGAGGTTGGGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KQPVKTCKTVPSDRIKPPRTPSP*WRLGLS Trigger: GCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCT...AGGTGGCTTTATCCTGTCTGAAGGAACTGTTTTACAGGTCTTCACTGGCTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR GCA 90 bp | AGCAGCAGCAGAGTATCGTCCAGGACTCTGTACTCAGAAATGCTCCCCCATCCATCACGTAGTAGGCAATaGCCAGAGACAGCAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSSRVSSRTLYSEMLPHPSRSRQ*PETAKQ Trigger: TTGCTTTGCTGTCTCTGGGCATTGCCTACTACGTGA...TGGATGGGGGAGCATTTCTGAGTACAGAGTCCTGGACGATACTCTGCTGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCAACTTATGCAGCAGCTaGCAGATGTCCACATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: KAEEKIPVARGLQKGHFANLCSS*QMSTFP Trigger: AGGGAATGTGGACATCTGCCAGCTGCTGCATAAGTT...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR GCA 90 bp | AAACAGCCAGTGAAGACCTGTAAAACAGTTCCTTCAGACAGGATAAAGCCACCTGGCACTTTCGCTCTCTaGCGTCTGCATGGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: KQPVKTCKTVPSDRIKPPGTFAL*RLHGLQ Trigger: CTGGAGACCATGCAGACGGCAGAGAGCGAAAGTGCC...AGGTGGCTTTATCCTGTCTGAAGGAACTGTTTTACAGGTCTTCACTGGCTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGCAGAGTATCGTCCAGGACTCTGTACTCAGAAATGCTCCCCCATCCAAAACTAAGAACTGAATaGTGTCCACATGGCCACACA | + |
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Preference number: 4 (lower is better) Translates to: SSSRVSSRTLYSEMLPHPKLRTE*CPHGHT Trigger: TGTGTGGCCATGTGGACACCATTCAGTTCTTAGTTT...TGGATGGGGGAGCATTTCTGAGTACAGAGTCCTGGACGATACTCTGCTGCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACAACGTGGTTCGGAAGCTaGACAGGACGCCTTCGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KARHCKLILKQPVKTCKTTWFGS*TGRLRL Trigger: AAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGT...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AAACAGCCAGTGAAGACCTGTAAAACAGTTCCTTCAGACAGGATAAAGCCACCTCAAACTCCTGCCACGTaGTTCGGAAGCTGGACAGGA | + |
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Preference number: 4 (lower is better) Translates to: KQPVKTCKTVPSDRIKPPQTPAT*FGSWTG Trigger: TCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTTTG...AGGTGGCTTTATCCTGTCTGAAGGAACTGTTTTACAGGTCTTCACTGGCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR TCA 90 bp | CAGAGAGAAGACTGCTCGCTTTCCAAACCTGTCTACTATCTGACTACATACTTTGCTGGAGGTTGGGGTTaGGCAGAGAATGGCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QREDCSLSKPVYYLTTYFAGGWG*AENGFP Trigger: TGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGC...AAAGTATGTAGTCAGATAGTAGACAGGTTTGGAAAGCGAGCAGTCTTCTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR TCA 90 bp | CACAGAAACCAGTGCTGGGCAGGAAGCAGGGATCGTAGAGGCAAAATATTTACAGAGACAGCAAAGCAATaGCCAAGATCAACAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: HRNQCWAGSRDRRGKIFTETAKQ*PRSTAR Trigger: TCTTGCTGTTGATCTTGGTCATTGCTTTGCTGTCTC...TGTAAATATTTTGCCTCTACGATCCCTGCTTCCTGCCCAGCACTGGTTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | CATAAGAAACATGGTTTCTATACCACAGAAGCAAAGAGGGCTTTCAGAGACGCTCCATCGATGCAAGCTTaGAGCAAGGGCACGTTAGTC | + |
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Preference number: 4 (lower is better) Translates to: HKKHGFYTTEAKRAFRDAPSMQA*SKGTLV Trigger: GACTAACGTGCCCTTGCTCCAAGCTTGCATCGATGG...AGCGTCTCTGAAAGCCCTCTTTGCTTCTGTGGTATAGAAACCATGTTTCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AATGGAATCCTAGAAAAAGAAATCCGCTTTCTGTCACTGCTCCTCCATCAAGGTGGGTTGAGCAGAGAATaGCTTTCCATGGCACTTTCG | + |
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Preference number: 4 (lower is better) Translates to: NGILEKEIRFLSLLLHQGGLSRE*LSMALS Trigger: CGAAAGTGCCATGGAAAGCCATTCTCTGCTCAACCC...ACCTTGATGGAGGAGCAGTGACAGAAAGCGGATTTCTTTTTCTAGGATTCCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AGAGAACCGTTAGCCCTTCACTGCAAGTTTCAAATTTTACTCATTATTAAACCTTCTCTGCCGTCTGCATaGTCTCCAGCTTCGAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: REPLALHCKFQILLIIKPSLPSA*SPASSA Trigger: CGCACTCGAAGCTGGAGACCATGCAGACGGCAGAGA...AGGTTTAATAATGAGTAAAATTTGAAACTTGCAGTGAAGGGCTAACGGTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAAAAGTGTCAGGGCTATGTATCTGAAAGCAGAGGAGAAGATACCAGTTTGGAAACTAAGAACTaGATGGTGTCCACATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LKEKCQGYVSESRGEDTSLETKN*MVSTWP Trigger: TGGCCATGTGGACACCATTCAGTTCTTAGTTTCCAA...ACTGGTATCTTCTCCTCTGCTTTCAGATACATAGCCCTGACACTTTTCTTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | AATGGAATCCTAGAAAAAGAAATCCGCTTTCTGTCACTGCTCCTCCATCAAGGTGTAATCTGTGGCCAGTaGATCAGCTCCAAACTTATG | + |
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Preference number: 4 (lower is better) Translates to: NGILEKEIRFLSLLLHQGVICGQ*ISSKLM Trigger: CATAAGTTTGGAGCTGATCCACTGGCCACAGATTAC...ACCTTGATGGAGGAGCAGTGACAGAAAGCGGATTTCTTTTTCTAGGATTCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR TCA 90 bp | CTGAAAGAAAAGTGTCAGGGCTATGTATCTGAAAGCAGAGGAGAAGATACCAGTGGGCACGTTAGTCTGTaGAGAATCATTCACAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LKEKCQGYVSESRGEDTSGHVSL*RIIHKN Trigger: GTTTTTGTGAATGATTCTTCACAGACTAACGTGCCC...ACTGGTATCTTCTCCTCTGCTTTCAGATACATAGCCCTGACACTTTTCTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CCA 90 bp | CAGAGAGAAGACTGCTCGCTTTCCAAACCTGTCTACTATCTGACTACATACTTTGCTGTCTCGGATATTTaGATCAAAGCCACTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QREDCSLSKPVYYLTTYFAVSDI*IKATFQ Trigger: TTGGAAAGTGGCTTTGATCCAAATATCCGAGACAGC...AAAGTATGTAGTCAGATAGTAGACAGGTTTGGAAAGCGAGCAGTCTTCTCTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS TCA 90 bp | TGCAGCAGCTGGCAGATGTCCACATTCCCTCGGGCCGCGGCGAGGTaGAGGCCCGTTCTGCCTCTGCTGTCTCGGATATTTGGATCAAAG | + |
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Preference number: 5 (lower is better) Translates to: CSSWQMSTFPRAAAR*RPVLPLLSRIFGSK Trigger: CTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCACCTCGCCGCGGCCCGAGGGAATGTGGACATCTGCCAGCTGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | GCAAGACCCTCCAGAAACCCAGGTCTTCCACAAACTCCTGCCACGTaGTTCGGAAGCTGGACAGGACGCCTTCGCCTTGCTGGAGGTTGG | + |
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Preference number: 5 (lower is better) Translates to: ARPSRNPGLPQTPAT*FGSWTGRLRLAGGW Trigger: CCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTTTGTGGAAGACCTGGGTTTCTGGAGGGTCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | GACAGGACGCCTTCGCCTTGCTGGAGGTTGGGGTTGAGCAGAGAATaGCTTTCCATGGCACTTTCGCTCTCTGCCGTCTGCATGGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: DRTPSPCWRLGLSRE*LSMALSLSAVCMVS Trigger: GGAGACCATGCAGACGGCAGAGAGCGAAAGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | TCCTGCCACGTGGTTCGGAAGCTGGACAGGACGCCTTCGCCTTGCTaGAGGTTGGGGTTGAGCAGAGAATGGCTTTCCATGGCACTTTCG | + |
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Preference number: 5 (lower is better) Translates to: SCHVVRKLDRTPSPC*RLGLSREWLSMALS Trigger: CGAAAGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS GCA 90 bp | AACTCCTGCCACGTGGTTCGGAAGCTGGACAGGACGCCTTCGCCTTaGTGGAGGTTGGGGTTGAGCAGAGAATGGCTTTCCATGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: NSCHVVRKLDRTPSP*WRLGLSREWLSMAL Trigger: AAGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | CCACATGGCCACACAGGTGGAGGGCCGTGTTCCCCTGGTAATCTGTaGCCAGTGGATCAGCTCCAAACTTATGCAGCAGCTGGCAGATGT | + |
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Preference number: 5 (lower is better) Translates to: PHGHTGGGPCSPGNL*PVDQLQTYAAAGRC Trigger: ACATCTGCCAGCTGCTGCATAAGTTTGGAGCTGATCCACTGGCCACAGATTACCAGGGGAACACGGCCCTCCACCTGTGTGGCCATGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | GCCACACAGGTGGAGGGCCGTGTTCCCCTGGTAATCTGTGGCCAGTaGATCAGCTCCAAACTTATGCAGCAGCTGGCAGATGTCCACATT | + |
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Preference number: 5 (lower is better) Translates to: ATQVEGRVPLVICGQ*ISSKLMQQLADVHI Trigger: AATGTGGACATCTGCCAGCTGCTGCATAAGTTTGGAGCTGATCCACTGGCCACAGATTACCAGGGGAACACGGCCCTCCACCTGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS GCA 90 bp | AGATGTCCACATTCCCTCGGGCCGCGGCGAGGTGAAGGCCCGTTCTaGCTCTGCTGTCTCGGATATTTGGATCAAAGCCACTTTCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RCPHSLGPRRGEGPF*LCCLGYLDQSHFPK Trigger: TTTTGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCACCTCGCCGCGGCCCGAGGGAATGTGGACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 90 bp | CGCGGCGAGGTGAAGGCCCGTTCTGCCTCTGCTGTCTCGGATATTTaGATCAAAGCCACTTTCCAAAAGCCTCTTGGAATAGGTGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: RGEVKARSASAVSDI*IKATFQKPLGIGEV Trigger: GACTTCACCTATTCCAAGAGGCTTTTGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCACCTCGCCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CAA 90 bp | AAAGCAGAGGAGAAGATACCAGTAGCGAGAGGCTTGCAGAAGGGCCACTTTGCCAGTCGGATGACATCTTaGTTCACACCCCGGCGCTTT | + |
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Preference number: 5 (lower is better) Translates to: KAEEKIPVARGLQKGHFASRMTS*FTPRRF Trigger: AAAGCGCCGGGGTGTGAACAAAGATGTCATCCGACT...GGCAAAGTGGCCCTTCTGCAAGCCTCTCGCTACTGGTATCTTCTCCTCTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CAA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACATCGCCTTGCTGGAGGTaGGGGTTGAGCAGAGAATGG | + |
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Preference number: 5 (lower is better) Translates to: KARHCKLILKQPVKTCKTSPCWR*GLSREW Trigger: CCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGA...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CAA 90 bp | CTGAAAGAAAAGTGTCAGGGCTATGTATCTGAAAGCAGAGGAGAAGATACCAGTCCCATCGATGCAAGCTaGGAGCAAGGGCACGTTAGT | + |
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Preference number: 5 (lower is better) Translates to: LKEKCQGYVSESRGEDTSPIDAS*EQGHVS Trigger: ACTAACGTGCCCTTGCTCCAAGCTTGCATCGATGGG...ACTGGTATCTTCTCCTCTGCTTTCAGATACATAGCCCTGACACTTTTCTTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS-3UTR CAA 90 bp | AAAGCAAGACACTGCAAGCTGATTCTGAAACAGCCAGTGAAGACCTGTAAAACATGCTGTCTCGGATATTaGGATCAAAGCCACTTTCCA | + |
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Preference number: 5 (lower is better) Translates to: KARHCKLILKQPVKTCKTCCLGY*DQSHFP Trigger: TGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCA...TGTTTTACAGGTCTTCACTGGCTGTTTCAGAATCAGCTTGCAGTGTCTTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 72 bp | GGTCTTCCACAAACTCCTGCCACGTGGTTCGGAAGCTaGACAGGACGCCTTCGCCTTGCTGGAGGTTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: GLPQTPATWFGS*TGRLRLAGGWG Trigger: ACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTTTGTGGAAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS GCA 72 bp | CTCGGGCCGCGGCGAGGTGAAGGCCCGTTCTGCCTCTaGTGTCTCGGATATTTGGATCAAAGCCACTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LGPRRGEGPFCL*CLGYLDQSHFP Trigger: TGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCACCTCGCCGCGGCCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS GCA 72 bp | CACGTGGTTCGGAAGCTGGACAGGACGCCTTCGCCTTaGTGGAGGTTGGGGTTGAGCAGAGAATGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: HVVRKLDRTPSP*WRLGLSREWLS Trigger: GGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 90 bp | CACGTGGTTCGGAAGCTGGACAGGACGCCTTCGCCTTGCTGGAGGTaGGGGTTGAGCAGAGAATGGCTTTCCATGGCACTTTCGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HVVRKLDRTPSPCWR*GLSREWLSMALSLS Trigger: AGAGAGCGAAAGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 90 bp | AAACTCCTGCCACGTGGTTCGGAAGCTGGACAGGACGCCTTCGCCTaGCTGGAGGTTGGGGTTGAGCAGAGAATGGCTTTCCATGGCACT | + |
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Preference number: 6 (lower is better) Translates to: KLLPRGSEAGQDAFA*LEVGVEQRMAFHGT Trigger: AGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 72 bp | TCCAGAAACCCAGGTCTTCCACAAACTCCTGCCACGTaGTTCGGAAGCTGGACAGGACGCCTTCGCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRNPGLPQTPAT*FGSWTGRLRLA Trigger: AGCAAGGCGAAGGCGTCCTGTCCAGCTTCCGAACCACGTGGCAGGAGTTTGTGGAAGACCTGGGTTTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 72 bp | CGGAAGCTGGACAGGACGCCTTCGCCTTGCTGGAGGTaGGGGTTGAGCAGAGAATGGCTTTCCATGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: RKLDRTPSPCWR*GLSREWLSMAL Trigger: AAGTGCCATGGAAAGCCATTCTCTGCTCAACCCCAACCTCCAGCAAGGCGAAGGCGTCCTGTCCAGCTTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS GCA 72 bp | GAATGGCTTTCCATGGCACTTTCGCTCTCTGCCGTCTaGATGGTCTCCAGCTTCGAGTGCGCGCCTCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: EWLSMALSLSAV*MVSSFECAPLL Trigger: TAACAGAGGCGCGCACTCGAAGCTGGAGACCATGCAGACGGCAGAGAGCGAAAGTGCCATGGAAAGCCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 72 bp | GTGGAGGGCCGTGTTCCCCTGGTAATCTGTGGCCAGTaGATCAGCTCCAAACTTATGCAGCAGCTGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: VEGRVPLVICGQ*ISSKLMQQLAD Trigger: ATCTGCCAGCTGCTGCATAAGTTTGGAGCTGATCCACTGGCCACAGATTACCAGGGGAACACGGCCCTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 72 bp | CACACAGGTGGAGGGCCGTGTTCCCCTGGTAATCTGTaGCCAGTGGATCAGCTCCAAACTTATGCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HTGGGPCSPGNL*PVDQLQTYAAA Trigger: AGCTGCTGCATAAGTTTGGAGCTGATCCACTGGCCACAGATTACCAGGGGAACACGGCCCTCCACCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 72 bp | TGTTCTTCCAAAGACTCCAGCAGTCGGATGACATCTTaGTTCACACCCCGGCGCTTTGCCAGAACTAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: CSSKDSSSRMTS*FTPRRFARTKG Trigger: CCCTTTAGTTCTGGCAAAGCGCCGGGGTGTGAACAAAGATGTCATCCGACTGCTGGAGTCTTTGGAAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 90 bp | TTTACTTCCTGTTCTTCCAAAGACTCCAGCAGTCGGATGACATCTTaGTTCACACCCCGGCGCTTTGCCAGAACTAAAGGGGTAGCACCT | + |
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Preference number: 6 (lower is better) Translates to: FTSCSSKDSSSRMTS*FTPRRFARTKGVAP Trigger: AGGTGCTACCCCTTTAGTTCTGGCAAAGCGCCGGGGTGTGAACAAAGATGTCATCCGACTGCTGGAGTCTTTGGAAGAACAGGAAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS TCA 72 bp | GATCAAAGCCACTTTCCAAAAGCCTCTTGGAATAGGTaGAGTCCCCATCGATGCAAGCTTGGAGCAAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: DQSHFPKASWNR*SPHRCKLGARA Trigger: TGCCCTTGCTCCAAGCTTGCATCGATGGGGACTTCACCTATTCCAAGAGGCTTTTGGAAAGTGGCTTTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS TCA 72 bp | TTACTTCCTGTTCTTCCAAAGACTCCAGCAGTCGGATaGCATCTTTGTTCACACCCCGGCGCTTTGCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: LLPVLPKTPAVG*HLCSHPGALPE Trigger: TTCTGGCAAAGCGCCGGGGTGTGAACAAAGATGTCATCCGACTGCTGGAGTCTTTGGAAGAACAGGAAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CAA 72 bp | GGTGAAGGCCCGTTCTGCCTCTGCTGTCTCGGATATTaGGATCAAAGCCACTTTCCAAAAGCCTCTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: GEGPFCLCCLGY*DQSHFPKASWN Trigger: ATTCCAAGAGGCTTTTGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS CCA 72 bp | GTGAAGGCCCGTTCTGCCTCTGCTGTCTCGGATATTTaGATCAAAGCCACTTTCCAAAAGCCTCTTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: VKARSASAVSDI*IKATFQKPLGI Trigger: TATTCCAAGAGGCTTTTGGAAAGTGGCTTTGATCCAAATATCCGAGACAGCAGAGGCAGAACGGGCCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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| CDS TCA 72 bp | CAAATATCAATTTTGAGTCCGTTGGAAACTAAGAACTaGATGGTGTCCACATGGCCACACAGGTGGAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QISILSPLETKN*MVSTWPHRWRA Trigger: GGCCCTCCACCTGTGTGGCCATGTGGACACCATTCAGTTCTTAGTTTCCAACGGACTCAAAATTGATATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057486.9 |
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