Pregenerated sensors for ANKRD45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044835Ensembl transcript IDs: ENSMUST00000052245.9, ENSMUST00000111608.8, ENSMUST00000125018.8, ENSMUST00000150721.4, ENSMUST00000192384.6
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTGGAGAACCACCATTGTCCGACCAAGAATCCTAATGGAATCCTaGGAGGATCTGACAATGAGGGTCAAGAAGAGGAGAAGCCGATGG | + |
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Preference number: 1 (lower is better) Translates to: GWRTTIVRPRILMES*EDLTMRVKKRRSRW Trigger: CCATCGGCTTCTCCTCTTCTTGACCCTCATTGTCAGATCCTCTCAGGATTCCATTAGGATTCTTGGTCGGACAATGGTGGTTCTCCACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 90 bp | AGGAAGTTCGCGGTCCTGCTTGATTTTACTACCAAGAGTACTTTCTaGGGACCCTTTCTGTCGCCATGGCCTTTAAAACACAGGCAATGT | + |
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Preference number: 1 (lower is better) Translates to: RKFAVLLDFTTKSTF*GPFLSPWPLKHRQC Trigger: ACATTGCCTGTGTTTTAAAGGCCATGGCGACAGAAAGGGTCCTCAGAAAGTACTCTTGGTAGTAAAATCAAGCAGGACCGCGAACTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 90 bp | AAGGCTCTTCCTAATGATCTCAGTGCTCATGTGCACCAAGTGTCTTaGAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCA | + |
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Preference number: 1 (lower is better) Translates to: KALPNDLSAHVHQVS*KIVLKGPSTELCLP Trigger: TGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTTCAAGACACTTGGTGCACATGAGCACTGAGATCATTAGGAAGAGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 90 bp | GCCAGGTGTGAGTCTTCTGAACAGTCTAACACAAAGCCAGGTAACTaGATTTGTACCCAGACATTTCTGCAAAACCCTGGATCTATTTCT | + |
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Preference number: 1 (lower is better) Translates to: ARCESSEQSNTKPGN*ICTQTFLQNPGSIS Trigger: AGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTACAAATTCAGTTACCTGGCTTTGTGTTAGACTGTTCAGAAGACTCACACCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 90 bp | AAACTTCCCCCAGAAAGTTGGAAAGTAATAGGAAGTTCGCGGTCCTaGTTGATTTTACTACCAAGAGTACTTTCTGAGGACCCTTTCTGT | + |
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Preference number: 1 (lower is better) Translates to: KLPPESWKVIGSSRS*LILLPRVLSEDPFC Trigger: ACAGAAAGGGTCCTCAGAAAGTACTCTTGGTAGTAAAATCAAGCAGGACCGCGAACTTCCTATTACTTTCCAACTTTCTGGGGGAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 90 bp | AGTCTAACACAAAGCCAGGTAACTGAATTTGTACCCAGACATTTCTaGAAAACCCTGGATCTATTTCTTGAACTTGGCAGGAACGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLTQSQVTEFVPRHF*KTLDLFLELGRNEE Trigger: TTCCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTACAAATTCAGTTACCTGGCTTTGTGTTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 90 bp | CCTTTCATAAAGATCTATATTCATTCACATGGAGAGAGAAGCATGTaGGTAAATTATACAGGACACCGAATGAGGCTAAGTTACACAGGA | + |
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Preference number: 1 (lower is better) Translates to: PFIKIYIHSHGERSM*VNYTGHRMRLSYTG Trigger: TCCTGTGTAACTTAGCCTCATTCGGTGTCCTGTATAATTTACTCACATGCTTCTCTCTCCATGTGAATGAATATAGATCTTTATGAAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 90 bp | CATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTaGACTGTTAAGTGTGTGCTTTTTAAAAAGTCATTAGTCTATGCA | + |
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Preference number: 1 (lower is better) Translates to: HNIKLPPFQILWRRS*TVKCVLFKKSLVYA Trigger: TGCATAGACTAATGACTTTTTAAAAAGCACACACTTAACAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAATGTAAGGGAGACCGGTaGGACTCAGCACAGTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KDCPKRTKHRALPTTSSKCKGDR*DSAQWQ Trigger: CTGCCACTGTGCTGAGTCCCACCGGTCTCCCTTACA...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGCAGAGGCCCAGCCCCTaGGCCAGGTGTGAGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IITLNCLPFKYCGGVPELQRPSP*ARCESS Trigger: AGAAGACTCACACCTGGCTCAGGGGCTGGGCCTCTG...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGTGGCATCTGTAAAAGGCACATCCTTGACTTCTCTGGTGACCACGGCTTACTTAGGTTATCGATTTaGCACTCTTCACTTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: PCGICKRHILDFSGDHGLLRLSI*HSSLGL Trigger: CAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAG...TAAGCCGTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTACAGATGCCACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111608.8 ENSMUST00000192384.6 |
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| 3UTR-3UTR TCA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTAGGACTCAGGAGGACTaGGCTTGGAGGACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TRTDHNIKLPPFQILWRRRTQED*AWRTQE Trigger: CTCCTGAGTCCTCCAAGCTCAGTCCTCCTGAGTCCT...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAACTTAGGTTATCGATTTaGCACTCTTCACTTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KDCPKRTKHRALPTTSSKLRLSI*HSSLGL Trigger: CAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAG...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTGATACAAGGATGCCATaGGGCCACCAGGTCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: TRTDHNIKLPPFQILWRRDTRMP*GHQVHD Trigger: GTCATGGACCTGGTGGCCCCATGGCATCCTTGTATC...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGCTGTGTTCATGATCAAGGCTCAGAAAACGTGGCTTAGAATAAAAATGACCAAGAGTACTTTCTaGGGACCCTTTCTGTCGCCA | + |
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Preference number: 2 (lower is better) Translates to: TTAVFMIKAQKTWLRIKMTKSTF*GPFLSP Trigger: TGGCGACAGAAAGGGTCCTCAGAAAGTACTCTTGGT...CATTTTTATTCTAAGCCACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTGTACTGCCAAACCCTaGGAGGGGAAACCACAGATT | + |
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Preference number: 2 (lower is better) Translates to: TRTDHNIKLPPFQILWRRCTAKP*EGKPQI Trigger: AATCTGTGGTTTCCCCTCTCAGGGTTTGGCAGTACA...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAAAGAGGGAGAGAGAAACTGTTCTAGCAGATGGTTTAAAATGCTTGTCTCAATGACCTCAATAGCATaGCCAAGAGAACATCACCTG | + |
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Preference number: 2 (lower is better) Translates to: GKEGERNCSSRWFKMLVSMTSIA*PREHHL Trigger: CAGGTGATGTTCTCTTGGTCATGCTATTGAGGTCAT...TGAGACAAGCATTTTAAACCATCTGCTAGAACAGTTTCTCTCTCCCTCTTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCTAGGATGGGGGAGACGATATCTTCCAATTGTTGTTTCTGCTCAAAAATCTACTAATGGAAGCCTCTaGATGGCTTTCCAACCACTC | + |
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Preference number: 2 (lower is better) Translates to: LLGWGRRYLPIVVSAQKSTNGSL*MAFQPL Trigger: GAGTGGTTGGAAAGCCATCCAGAGGCTTCCATTAGT...AGATTTTTGAGCAGAAACAACAATTGGAAGATATCGTCTCCCCCATCCTAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000150721.4 ENSMUST00000192384.6 |
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| 3UTR-3UTR GCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGGGAAGTTCGCGGTCCTaGTTGATTTTACTACCAAGA | + |
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Preference number: 2 (lower is better) Translates to: IITLNCLPFKYCGGVPELGSSRS*LILLPR Trigger: TCTTGGTAGTAAAATCAAGCAGGACCGCGAACTTCC...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAAAAAAGATCTCAGAAGTaGAAACTTGGGGAAACATTT | + |
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Preference number: 2 (lower is better) Translates to: KDCPKRTKHRALPTTSSKKRSQK*KLGETF Trigger: AAATGTTTCCCCAAGTTTCCACTTCTGAGATCTTTT...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTCCACTGCTGTGTTCATaGTCAAGGCTCAGAAAACGT | + |
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Preference number: 2 (lower is better) Translates to: HQTHSIRASKSPIDLRISPLLCS*SRLRKR Trigger: ACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGG...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR CAA 90 bp | TTGTACCCAGACATTTCTGCAAAACCCTGGATCTATTTCTTGAACTaGGCAGGAACGAGGAACAGGTTTGTCGTATTTAATACTGAAATG | + |
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Preference number: 2 (lower is better) Translates to: LYPDISAKPWIYFLN*AGTRNRFVVFNTEM Trigger: CATTTCAGTATTAAATACGACAAACCTGTTCCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGCTGTGTTCATGATCAAGGCTCAGAAAACGTGGCTTAGAATAAAAATGACAAAGCCAGGTAACTaGATTTGTACCCAGACATTT | + |
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Preference number: 2 (lower is better) Translates to: TTAVFMIKAQKTWLRIKMTKPGN*ICTQTF Trigger: AAATGTCTGGGTACAAATTCAGTTACCTGGCTTTGT...CATTTTTATTCTAAGCCACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACTGCTGTGTTCATGATCAAGGCTCAGAAAACGTGGCTTAGAATAAAAATGAAGAGAGGGAACACCTaGTTTTCTTTTACAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: TTAVFMIKAQKTWLRIKMKRGNT*FSFTNG Trigger: GCCATTTGTAAAAGAAAAGCAGGTGTTCCCTCTCTT...CATTTTTATTCTAAGCCACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGAATCCCCTAGTCAAGTaGAAATTTCTTGCCTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: IITLNCLPFKYCGGVPELNPLVK*KFLASV Trigger: AACTGAGGCAAGAAATTTCCACTTGACTAGGGGATT...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTATCTCAGTGCTCATGTaGACCAAGTGTCTTGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: HQTHSIRASKSPIDLRISISVLM*TKCLER Trigger: TCTTTCAAGACACTTGGTGCACATGAGCACTGAGAT...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR GCA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTGTACCCAGACATTTCTaGAAAACCCTGGATCTATTT | + |
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Preference number: 2 (lower is better) Translates to: HQTHSIRASKSPIDLRISVPRHF*KTLDLF Trigger: AAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTAC...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGAAGGCTCAGAAAACGTaGCTTAGAATAAAAATGACA | + |
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Preference number: 2 (lower is better) Translates to: IITLNCLPFKYCGGVPELKAQKT*LRIKMT Trigger: TGTCATTTTTATTCTAAGCCACGTTTTCTGAGCCTT...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 72 bp | AGAGCTCTGCCTACCACGAGCAGCAAATACTCTGGGTaGCGCAGAGACGGGCTAGTGTTCGGGTTTCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RALPTTSSKYSG*RRDGLVFGFLL Trigger: CAGCAGAAACCCGAACACTAGCCCGTCTCTGCGGCACCCAGAGTATTTGCTGCTCGTGGTAGGCAGAGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | TGCTTGGAGGACTCAGTAGAACTGAGCTTGGAGGACTCAGTAGAACTGAGCTTGTCAGGAGGACTGAGCTaGGAGGACTCAGGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: CLEDSVELSLEDSVELSLSGGLS*EDSGGA Trigger: GGCTCCTCCTGAGTCCTCCAAGCTCAGTCCTCCTGA...CAAGCTCAGTTCTACTGAGTCCTCCAAGCTCAGTTCTACTGAGTCCTCCAAGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR CCA 72 bp | TGGCCTTTAAAACACAGGCAATGTAAGGGAGACCGGTaGGACTCAGCACAGTGGCAGTTACCGTGTACTGCC | + |
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Preference number: 3 (lower is better) Translates to: WPLKHRQCKGDR*DSAQWQLPCTA Trigger: GGCAGTACACGGTAACTGCCACTGTGCTGAGTCCCACCGGTCTCCCTTACATTGCCTGTGTTTTAAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGCAGGAGGAGCCCAGCTaGGAGGAGCAGAGGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: IITLNCLPFKYCGGVPELQEEPS*EEQRPS Trigger: GCTGGGCCTCTGCTCCTCCAAGCTGGGCTCCTCCTG...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR CCA 72 bp | TACTGCCAAACCCTGAGAGGGGAAACCACAGATTTGTaGGCTTTCCTCAGAAACTATATCCCACCTTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: YCQTLRGETTDL*AFLRNYIPPSG Trigger: CCCGGAAGGTGGGATATAGTTTCTGAGGAAAGCCCACAAATCTGTGGTTTCCCCTCTCAGGGTTTGGCAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | CTCGTTTTTCAGACGGCACGCATTGAGGATGGTGCTCTTGTCTTCCTTGAAGAGGTAAAAGGCACATCCTaGACTTCTCTGGTGACCACG | + |
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Preference number: 3 (lower is better) Translates to: LVFQTARIEDGALVFLEEVKGTS*TSLVTT Trigger: CGTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTAC...CTCTTCAAGGAAGACAAGAGCACCATCCTCAATGCGTGCCGTCTGAAAAACGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192384.6 |
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| 3UTR-3UTR CAA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTCAGGAGGAGCCCAGCTaGGAGGACTCAGGAGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: TRTDHNIKLPPFQILWRRQEEPS*EDSGGA Trigger: GGCTCCTCCTGAGTCCTCCAAGCTGGGCTCCTCCTG...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | CGTGGTGTAGACATTTTTGCTAGGATGGGGGAGACGATATCTTCCAATTGTTGTGTGCTCTTGTCTTCCTaGAAGAGTTTCCCCGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RGVDIFARMGETISSNCCVLLSS*KSFPGP Trigger: GGGACCGGGGAAACTCTTCAAGGAAGACAAGAGCAC...ACAACAATTGGAAGATATCGTCTCCCCCATCCTAGCAAAAATGTCTACACCACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000150721.4 ENSMUST00000192384.6 |
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| 3UTR TCA 72 bp | GCGGTCCTGCTTGATTTTACTACCAAGAGTACTTTCTaGGGACCCTTTCTGTCGCCATGGCCTTTAAAACAC | + |
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Preference number: 3 (lower is better) Translates to: AVLLDFTTKSTF*GPFLSPWPLKH Trigger: GTGTTTTAAAGGCCATGGCGACAGAAAGGGTCCTCAGAAAGTACTCTTGGTAGTAAAATCAAGCAGGACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | ACCACCATTGTCCGACCAAGAATCCTAATGGAATCCTaGGAGGATCTGACAATGAGGGTCAAGAAGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TTIVRPRILMES*EDLTMRVKKRR Trigger: TCTCCTCTTCTTGACCCTCATTGTCAGATCCTCTCAGGATTCCATTAGGATTCTTGGTCGGACAATGGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | TGGGCTTTCCTCAGAAACTATATCCCACCTTCCGGGTaGATTTTAATTCAGACAGCTAAAACCAGAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: WAFLRNYIPPSG*ILIQTAKTRGP Trigger: GGGTCCTCTGGTTTTAGCTGTCTGAATTAAAATTCACCCGGAAGGTGGGATATAGTTTCTGAGGAAAGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | CCTAATGATCTCAGTGCTCATGTGCACCAAGTGTCTTaGAAGATTGTCCTAAAAGGACCAAGCACAGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: PNDLSAHVHQVS*KIVLKGPSTEL Trigger: GAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTTCAAGACACTTGGTGCACATGAGCACTGAGATCATTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR CCA 72 bp | ACCACTGCTGTGTTCATGATCAAGGCTCAGAAAACGTaGCTTAGAATAAAAATGACAACACCACCCATCCCC | + |
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Preference number: 3 (lower is better) Translates to: TTAVFMIKAQKT*LRIKMTTPPIP Trigger: GGGGATGGGTGGTGTTGTCATTTTTATTCTAAGCCACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | ACCACTGCTGTGTTCATGATCAAGGCTCAGAAAACGTGGCTTAGAATAAAAATGGGGGAAACCACAGATTaGTGGGCTTTCCTCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: TTAVFMIKAQKTWLRIKMGETTD*WAFLRN Trigger: GTTTCTGAGGAAAGCCCACAAATCTGTGGTTTCCCC...CATTTTTATTCTAAGCCACGTTTTCTGAGCCTTGATCATGAACACAGCAGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | ACCCAGACATTTCTGCAAAACCCTGGATCTATTTCTTaGACTTGGCAGGAACGAGGAACAGGTTTGTCGTAT | + |
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Preference number: 3 (lower is better) Translates to: TQTFLQNPGSIS*TWQERGTGLSY Trigger: ATACGACAAACCTGTTCCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTGTAAAAGGCACATCCTaGACTTCTCTGGTGACCACG | + |
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Preference number: 3 (lower is better) Translates to: TRTDHNIKLPPFQILWRRVKGTS*TSLVTT Trigger: CGTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTAC...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | GAGTCTTCTGAACAGTCTAACACAAAGCCAGGTAACTaGATTTGTACCCAGACATTTCTGCAAAACCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: ESSEQSNTKPGN*ICTQTFLQNPG Trigger: TCCAGGGTTTTGCAGAAATGTCTGGGTACAAATTCAGTTACCTGGCTTTGTGTTAGACTGTTCAGAAGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 72 bp | CAAAGCCAGGTAACTGAATTTGTACCCAGACATTTCTaGAAAACCCTGGATCTATTTCTTGAACTTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QSQVTEFVPRHF*KTLDLFLELGR Trigger: CCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTACAAATTCAGTTACCTGGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTCCCTGGATCTATTTCTaGAACTTGGCAGGAACGAGG | + |
|
Preference number: 3 (lower is better) Translates to: HQTHSIRASKSPIDLRISPWIYF*NLAGTR Trigger: CCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGG...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTAGCTTCTCTGTGTGCTaGTATGCTTGGAGGACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HQTHSIRASKSPIDLRISSFSVC*YAWRTQ Trigger: CTGAGTCCTCCAAGCATACAAGCACACAGAGAAGCT...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR CCA 72 bp | ATCTTTGTAATATTGAAGATGGGGATAGTCATAGGGTaGAGAACCACCATTGTCCGACCAAGAATCCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: IFVILKMGIVIG*RTTIVRPRILM Trigger: CATTAGGATTCTTGGTCGGACAATGGTGGTTCTCCACCCTATGACTATCCCCATCTTCAATATTACAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGACTTCCCCCAGAAAGTaGGAAAGTAATAGGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: IITLNCLPFKYCGGVPELTSPRK*ESNRKF Trigger: GAACTTCCTATTACTTTCCAACTTTCTGGGGGAAGT...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR-3UTR CAA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTGTGCACCAAGTGTCTaGAAAGATTGTCCTAAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TRTDHNIKLPPFQILWRRCAPSV*KDCPKR Trigger: CCTTTTAGGACAATCTTTCAAGACACTTGGTGCACA...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 72 bp | AGGGAGAGAGAAACTGTTCTAGCAGATGGTTTAAAATaGTTGTCTCACCTGGGACTAAAAGTACGTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RERETVLADGLK*LSHLGLKVRLK Trigger: CTTTAAACGTACTTTTAGTCCCAGGTGAGACAAGCATTTTAAACCATCTGCTAGAACAGTTTCTCTCTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR GCA 72 bp | AAGAACTACCAACTAGAACTGATCATAACATTAAATTaGCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KNYQLELIITLN*LPFKYCGGVPE Trigger: TTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGTTGGTAGTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTCTTAGTATTTGCTTTTaGAAAGAGAGGGAACACCTG | + |
|
Preference number: 3 (lower is better) Translates to: HQTHSIRASKSPIDLRISLSICF*KEREHL Trigger: CAGGTGTTCCCTCTCTTTCAAAAAGCAAATACTAAG...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | AAGATCTATATTCATTCACATGGAGAGAGAAGCATGTaGGTAAATTATACAGGACACCGAATGAGGCTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KIYIHSHGERSM*VNYTGHRMRLS Trigger: ACTTAGCCTCATTCGGTGTCCTGTATAATTTACTCACATGCTTCTCTCTCCATGTGAATGAATATAGATCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
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| 3UTR TCA 72 bp | AAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTaGACTGTTAAGTGTGTGCTTTTTAAAAAGTCATTA | + |
|
Preference number: 3 (lower is better) Translates to: KLPPFQILWRRS*TVKCVLFKKSL Trigger: TAATGACTTTTTAAAAAGCACACACTTAACAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGTGTGCTTGTATGCTTGGAGGACTCAGTAGAACTGAGCTTGGAGGACTCACCAGTGAGAGTGGGCTaGAGAAGGGGGTTCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LCVLVCLEDSVELSLEDSPVRVG*RRGFSA Trigger: CGCTGAGAACCCCCTTCTGCAGCCCACTCTCACTGG...TGAGTCCTCCAAGCTCAGTTCTACTGAGTCCTCCAAGCATACAAGCACACAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | CACAGTTGGGAGCGGGCAGACAGAGAGCCACAATGTTaGCTGTGCGTATGGCTTGTCTGTGGTACACTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HSWERADREPQC*LCVWLVCGTLT Trigger: TGTCAGTGTACCACAGACAAGCCATACGCACAGCAAACATTGTGGCTCTCTGTCTGCCCGCTCCCAACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR TCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGCTTCCACGTCCCCAGTaGGAGTGGGCTGCAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IITLNCLPFKYCGGVPELLPRPQ*EWAAEG Trigger: CCCTTCTGCAGCCCACTCTCACTGGGGACGTGGAAG...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | GTGTACTGCCAAACCCTGAGAGGGGAAACCACAGATTaGTGGGCTTTCCTCAGAAACTATATCCCACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VYCQTLRGETTD*WAFLRNYIPPS Trigger: GGAAGGTGGGATATAGTTTCTGAGGAAAGCCCACAAATCTGTGGTTTCCCCTCTCAGGGTTTGGCAGTACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | TGGCTTTCCAACCACTCGTTTTTCAGACGGCACGCATaGAGGATGGTGCTCTTGTCTTCCTTGAAGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLSNHSFFRRHA*RMVLLSSLKSF Trigger: GAAACTCTTCAAGGAAGACAAGAGCACCATCCTCAATGCGTGCCGTCTGAAAAACGAGTGGTTGGAAAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000150721.4 ENSMUST00000192384.6 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGCATCTGTAAAAGGCACATCCTTGACTTCTCTGGTGACCACGGCTTATCCTCAAAAATCTTCTaGAAACCTTCCACGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGICKRHILDFSGDHGLSSKIF*KPSTSP Trigger: TGGGGACGTGGAAGGTTTGCAGAAGATTTTTGAGGA...TAAGCCGTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTACAGATGCCACATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAAATGGAAGCCTCTGGATaGCTTTCCAACCACTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDCPKRTKHRALPTTSSKMEASG*LSNHSF Trigger: AAACGAGTGGTTGGAAAGCCATCCAGAGGCTTCCAT...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGGTTATCGATTTGGCACTCTTCACTTGGCCTGTTGATAAGTGTAAGGTCTTGCTCTTGTCTTCCTTaGAGAGTTTCCCCGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRLSIWHSSLGLLISVRSCSCLP*RVSPVP Trigger: AGGGACCGGGGAAACTCTTCAAGGAAGACAAGAGCA...AGACCTTACACTTATCAACAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGCATCTGTAAAAGGCACATCCTTGACTTCTCTGGTGACCACGGCTTAGTTTCTTCTGCTTCTTaGGACTCTTCATACTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCGICKRHILDFSGDHGLVSSAS*DSSYSC Trigger: GCAAGAGTATGAAGAGTCGCAAGAAGCAGAAGAAAC...TAAGCCGTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTACAGATGCCACATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTGGAGGACTCAGTAGAACTGAGCTTGGAGGACTCAGTAGAACTGAGCTTGATTCACCCCATACTTTaGCAAGGCTTTAATTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLEDSVELSLEDSVELSLIHPIL*QGFNYV Trigger: GACGTAATTAAAGCCTTGGCAAAGTATGGGGTGAAT...CAAGCTCAGTTCTACTGAGTCCTCCAAGCTCAGTTCTACTGAGTCCTCCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR CCA 90 bp | GGCAAAGAGGGAGAGAGAAACTGTTCTAGCAGATGGTTTAAAATGCTTGTCTCAAGAGCGTGTACCCTCTaGCAGTTGCCTCATTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GKEGERNCSSRWFKMLVSRACTL*QLPHSD Trigger: ATCTGAATGAGGCAACTGCCAGAGGGTACACGCTCT...TGAGACAAGCATTTTAAACCATCTGCTAGAACAGTTTCTCTCTCCCTCTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | TACCCAGACATTTCTGCAAAACCCTGGATCTATTTCTaGAACTTGGCAGGAACGAGGAACAGGTTTGTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: YPDISAKPWIYF*NLAGTRNRFVV Trigger: TACGACAAACCTGTTCCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTCTGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | GAAAGTTGGAAAGTAATAGGAAGTTCGCGGTCCTGCTaGATTTTACTACCAAGAGTACTTTCTGAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESWKVIGSSRSC*ILLPRVLSEDP Trigger: AGGGTCCTCAGAAAGTACTCTTGGTAGTAAAATCAAGCAGGACCGCGAACTTCCTATTACTTTCCAACTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | GCTTCTGGCGCTGTAAATGTCCCCAAGAAGGAAAGGTaGGATCTTTGTAATATTGAAGATGGGGATAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASGAVNVPKKER*DLCNIEDGDSH Trigger: ATGACTATCCCCATCTTCAATATTACAAAGATCCAACCTTTCCTTCTTGGGGACATTTACAGCGCCAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR GCA 90 bp | CATCAAACTCACAGCATAAGGGCATCTAAATCTCCTATTGATCTACGTATAAGTGCCAGCCATGCAAGCTaGATACAACAGATTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HQTHSIRASKSPIDLRISASHAS*IQQISP Trigger: GGGAGAAATCTGTTGTATGCAGCTTGCATGGCTGGC...ACTTATACGTAGATCAATAGGAGATTTAGATGCCCTTATGCTGTGAGTTTGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR GCA 90 bp | ATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTTCCTGAACTGCACTTTTGCCAGCCATaGAAGCTGCATACAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IITLNCLPFKYCGGVPELHFCQP*KLHTTD Trigger: ATCTGTTGTATGCAGCTTGCATGGCTGGCAAAAGTG...CAGTTCAGGAACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGAACTGATCATAACATTAAATTGCCTCCCTTTCAAATACTGTGGAGGCGTACTAATGGAAGCCTCTaGATGGCTTTCCAACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TRTDHNIKLPPFQILWRRTNGSL*MAFQPL Trigger: GAGTGGTTGGAAAGCCATCCAGAGGCTTCCATTAGT...ACGCCTCCACAGTATTTGAAAGGGAGGCAATTTAATGTTATGATCAGTTCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | CTTAGGTTATCGATTTGGCACTCTTCACTTGGCCTGTaGATAAGTGTAAGGTCTCTTTATGAGGCAGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRLSIWHSSLGL*ISVRSLYEAAK Trigger: TTTTGCTGCCTCATAAAGAGACCTTACACTTATCAACAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192384.6 |
||
| 3UTR CAA 72 bp | GACATTTCTGCAAAACCCTGGATCTATTTCTTGAACTaGGCAGGAACGAGGAACAGGTTTGTCGTATTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DISAKPWIYFLN*AGTRNRFVVFN Trigger: ATTAAATACGACAAACCTGTTCCTCGTTCCTGCCAAGTTCAAGAAATAGATCCAGGGTTTTGCAGAAATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| 3UTR CAA 72 bp | GAGAGAGAAACTGTTCTAGCAGATGGTTTAAAATGCTaGTCTCACCTGGGACTAAAAGTACGTTTAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERETVLADGLKC*SHLGLKVRLKP Trigger: AGGCTTTAAACGTACTTTTAGTCCCAGGTGAGACAAGCATTTTAAACCATCTGCTAGAACAGTTTCTCTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS TCA 90 bp | GACGGCCCCAGGCTGCAGCGCAGTGTAAGAGCGTGTACCCTTGGATaGCGCCCACCACGGCAGCCCCTGACGCCAGGATCCCGTAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGPRLQRSVRACTLG*RPPRQPLTPGSRSD Trigger: ATCACTACGGGATCCTGGCGTCAGGGGCTGCCGTGGTGGGCGTCATCCAAGGGTACACGCTCTTACACTGCGCTGCAGCCTGGGGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150721.4 |
||
| CDS-3UTR CAA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAAGTGCTCTTGTCTTCCTaGAAGAGTTTCCCCGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KDCPKRTKHRALPTTSSKVLLSS*KSFPGP Trigger: GGGACCGGGGAAACTCTTCAAGGAAGACAAGAGCAC...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS GCA 90 bp | CGTGTACCCTCTGGCAGTTGCCTCATTCAGATTCACCCCATACTTTaGCAAGGCTTTAATTACGTCACTTTTGCCAGCCATGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPSGSCLIQIHPIL*QGFNYVTFASHASC Trigger: GCAGCTTGCATGGCTGGCAAAAGTGACGTAATTAAAGCCTTGGCAAAGTATGGGGTGAATCTGAATGAGGCAACTGCCAGAGGGTACACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS-3UTR CAA 90 bp | CCACGGCTTAGGTTATCGATTTGGCACTCTTCACTTGGCCTGTTGATAAGTGTATGTACCCTCTGGCAGTaGCCTCATTCAGATTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PRLRLSIWHSSLGLLISVCTLWQ*PHSDSP Trigger: GGGTGAATCTGAATGAGGCAACTGCCAGAGGGTACA...TACACTTATCAACAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAGCCGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATTGTCCTAAAAGGACCAAGCACAGAGCTCTGCCTACCACGAGCAGCAAATTAATTACGTCACTTTaGCCAGCCATGCAAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDCPKRTKHRALPTTSSKLITSL*PAMQAA Trigger: TGCAGCTTGCATGGCTGGCAAAAGTGACGTAATTAA...TTTGCTGCTCGTGGTAGGCAGAGCTCTGTGCTTGGTCCTTTTAGGACAATCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS-3UTR CAA 90 bp | TCTACACCATGTGGCATCTGTAAAAGGCACATCCTTGACTTCTCTGGTGACCACTTGAGGATGGTGCTCTaGTCTTCCTTGAAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: STPCGICKRHILDFSGDHLRMVL*SSLKSF Trigger: GAAACTCTTCAAGGAAGACAAGAGCACCATCCTCAA...GTGGTCACCAGAGAAGTCAAGGATGTGCCTTTTACAGATGCCACATGGTGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS GCA 90 bp | CTTTGCCAAGGCTTTAATTACGTCACTTTTGCCAGCCATGCAAGCTaGATACAACAGATTTCTCCCAACAATGTCTTCTTCCAAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQGFNYVTFASHAS*IQQISPNNVFFQKQ Trigger: CTGCTTTTGGAAGAAGACATTGTTGGGAGAAATCTGTTGTATGCAGCTTGCATGGCTGGCAAAAGTGACGTAATTAAAGCCTTGGCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTTATCGATTTGGCACTCTTCACTTGGCCTGTTGATAAGTGTAAGGTCTTGTTTCTTCTGCTTCTaGCGACTCTTCATACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRLSIWHSSLGLLISVRSCFFCF*RLFILL Trigger: CAAGAGTATGAAGAGTCGCAAGAAGCAGAAGAAACA...AGACCTTACACTTATCAACAGGCCAAGTGAAGAGTGCCAAATCGATAACCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111608.8 |
||
| CDS CCA 72 bp | CCCCAGGCTGCAGCGCAGTGTAAGAGCGTGTACCCTTaGATGACGCCCACCACGGCAGCCCCTGACGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PQAAAQCKSVYP*MTPTTAAPDAR Trigger: CCTGGCGTCAGGGGCTGCCGTGGTGGGCGTCATCCAAGGGTACACGCTCTTACACTGCGCTGCAGCCTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150721.4 |
||
| CDS GCA 72 bp | TTCTGCAAACCTTCCACGTCCCCAGTGAGAGTGGGCTaGAGAAGGGGGTTCTCAGCGCCTGTTTCTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FCKPSTSPVRVG*RRGFSAPVSSA Trigger: AGCAGAAGAAACAGGCGCTGAGAACCCCCTTCTGCAGCCCACTCTCACTGGGGACGTGGAAGGTTTGCAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS CCA 72 bp | CCCAGGCTGCAGCGCAGTGTAAGAGCGTGTACCCTCTaGCAGTTGCCTCATTCAGATTCACCCCATACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PRLQRSVRACTL*QLPHSDSPHTL Trigger: CAAAGTATGGGGTGAATCTGAATGAGGCAACTGCCAGAGGGTACACGCTCTTACACTGCGCTGCAGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS CAA 72 bp | CTGCAGCGCAGTGTAAGAGCGTGTACCCTCTGGCAGTaGCCTCATTCAGATTCACCCCATACTTTGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQRSVRACTLWQ*PHSDSPHTLPR Trigger: CCTTGGCAAAGTATGGGGTGAATCTGAATGAGGCAACTGCCAGAGGGTACACGCTCTTACACTGCGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS TCA 72 bp | TCTTCTTCCAAAAGCAGCTGCACAGCGTGCTCATGGTaGGGATGTTCAGGGTCCTCAAAAATCTTCTGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSSKSSCTACSW*GCSGSSKIFCK Trigger: TTTGCAGAAGATTTTTGAGGACCCTGAACATCCTCACCATGAGCACGCTGTGCAGCTGCTTTTGGAAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS GCA 72 bp | CCTGTTTCTTCTGCTTCTTGCGACTCTTCATACTCTTaGTGTGAGGAAAATAGTGACTTTTCTGAACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVSSASCDSSYS*CEENSDFSELS Trigger: GGAGAGTTCAGAAAAGTCACTATTTTCCTCACAGCAAGAGTATGAAGAGTCGCAAGAAGCAGAAGAAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
||
| CDS GCA 72 bp | GGCTTTAATTACGTCACTTTTGCCAGCCATGCAAGCTaGATACAACAGATTTCTCCCAACAATGTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GFNYVTFASHAS*IQQISPNNVFF Trigger: GAAGAAGACATTGTTGGGAGAAATCTGTTGTATGCAGCTTGCATGGCTGGCAAAAGTGACGTAATTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052245.9 ENSMUST00000111608.8 ENSMUST00000125018.8 |
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