Pregenerated sensors for ANKRD42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041343Ensembl transcript IDs: ENSMUST00000056106.14, ENSMUST00000118157.8, ENSMUST00000126305.8, ENSMUST00000138267.2, ENSMUST00000207131.2, ENSMUST00000207151.2
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GCCGCGACACTGGTGACCTGGATTTTCTGCAGCGTTTCCTTGAGTTaGTCCACTTCCACTCGATACTCATCCAGCTGGCACTCTAACTTT | + |
Preference number: 1 (lower is better) Translates to: AATLVTWIFCSVSLS*STSTRYSSSWHSNF Trigger: AAAGTTAGAGTGCCAGCTGGATGAGTATCGAGTGGAAGTGGATCAACTCAAGGAAACGCTGCAGAAAATCCAGGTCACCAGTGTCGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR TCA 90 bp | GGAGGTTTCCATTGTAGTCCACGTCTTCGATGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAACCAAGCCGCCCATGAAAAGATGCAT | + |
Preference number: 1 (lower is better) Translates to: GGFHCSPRLRCHIPI*QEVASNQAAHEKMH Trigger: ATGCATCTTTTCATGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCATCGAAGACGTGGACTACAATGGAAACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR GCA 90 bp | CCATTTGACAAGAAGTTGCAAGCAACCAAGCCGCCCATGAAAAGATaGATAATGCACAGGTTTCCACTCTCTCTTGTCAGTCACGCTGGG | + |
Preference number: 1 (lower is better) Translates to: PFDKKLQATKPPMKR*IMHRFPLSLVSHAG Trigger: CCCAGCGTGACTGACAAGAGAGAGTGGAAACCTGTGCATTATGCATCTTTTCATGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR TCA 90 bp | CAAACAATCAATGTGGCCCTGTCCAGCAGCTTTATGCATGGGAGTTaGTCCATTATCATCGCGTTCATTCAGATTGATTACCCCGTCTCC | + |
Preference number: 1 (lower is better) Translates to: QTINVALSSSFMHGS*SIIIAFIQIDYPVS Trigger: GGAGACGGGGTAATCAATCTGAATGAACGCGATGATAATGGATCAACTCCCATGCATAAAGCTGCTGGACAGGGCCACATTGATTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR GCA 90 bp | GCTTTGTTGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTaGAAACAATCAATGTGGCCCTGTCCAGCAGCTTTATGCATGGGA | + |
Preference number: 1 (lower is better) Translates to: ALLVILLSAPISINH*KQSMWPCPAALCMG Trigger: TCCCATGCATAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR-3UTR TCA 90 bp | TCAAACAATGGAGGTGGCCTTCCATGGCTGCTAAATGAACCGGGAGGTTTCCATTGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAAC | + |
Preference number: 2 (lower is better) Translates to: SNNGGGLPWLLNEPGGFHCHIPI*QEVASN Trigger: GTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCA...ATGGAAACCTCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCCATTGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CCA 90 bp | AGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGAGAGGCAGGAAGAGCTaGCAGTTTTCCTCACTCATG | + |
Preference number: 2 (lower is better) Translates to: SRSSLTCHCSPYSWYKFKRGRKS*QFSSLM Trigger: CATGAGTGAGGAAAACTGCCAGCTCTTCCTGCCTCT...CTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR CAA 90 bp | ATTGTAGTCCACGTCTTCGATGCCACATCCCCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCCATGAAAAGATGCATAATGCACAGG | + |
Preference number: 2 (lower is better) Translates to: IVVHVFDATSPFDKK*QATKPPMKRCIMHR Trigger: CCTGTGCATTATGCATCTTTTCATGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCATCGAAGACGTGGACTACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CAA 90 bp | AGAGGAGACCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTGCAAA | + |
Preference number: 2 (lower is better) Translates to: RGDLLATSLGVSPAL*VILLSAPISINHCK Trigger: TTTGCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGGTCTCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207151.2 |
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3UTR-3UTR TCA 90 bp | CATATTTCTGTAGCCCCTCCAAGAGTTTCACTGCAGCCAAATGGGCAAATCTCTAGCATTTTCCCCTTCTaGACTGCAGGCTTTCTATGG | + |
Preference number: 2 (lower is better) Translates to: HISVAPPRVSLQPNGQISSIFPF*TAGFLW Trigger: CCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCT...AGAGATTTGCCCATTTGGCTGCAGTGAAACTCTTGGAGGGGCTACAGAAATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CCA 90 bp | TTCTGCTTTAAATCCTCTTCGGTTATCCCACCCAAGTGTTTAAAGTTGCTCTCAGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGA | + |
Preference number: 2 (lower is better) Translates to: FCFKSSSVIPPKCLKLLSGGGLP*LLNEPG Trigger: TCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCC...TGAGAGCAACTTTAAACACTTGGGTGGGATAACCGAAGAGGATTTAAAGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CAA 90 bp | TGGGCAAATCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTGCAAA | + |
Preference number: 2 (lower is better) Translates to: WANLLATSLGVSPAL*VILLSAPISINHCK Trigger: TTTGCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGATTTGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CAA 90 bp | AAATGGGCAAATCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTGC | + |
Preference number: 2 (lower is better) Translates to: KWANLLATSLGVSPA*LVILLSAPISINHC Trigger: GCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGATTTGCCCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR TCA 90 bp | CAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCTCTTCTAGGGCTTCCATaGCTGCAGGCACTGTGCTGC | + |
Preference number: 2 (lower is better) Translates to: QNTQCYAANPPASVNINALLGLP*LQALCC Trigger: GCAGCACAGTGCCTGCAGTCATGGAAGCCCTAGAAG...AGCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR-3UTR GCA 90 bp | TGCAAACAATCAATGTGGCCCTGTCCAGCAGCTTTATGCATGGGAGTTGATCCATTTCCCCTTCTGAACTaGAGGCTTTCTATGGATTCA | + |
Preference number: 2 (lower is better) Translates to: CKQSMWPCPAALCMGVDPFPLLN*RLSMDS Trigger: TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA...TGGATCAACTCCCATGCATAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR GCA 90 bp | ACAAAACAATCCAATGAGGTAGAGTGGCACAAACCTCTAATCCCAGCCCAGGGAGTTTACTCTCATCTGTaGTGTTTCCAAAGCCATACC | + |
Preference number: 2 (lower is better) Translates to: TKQSNEVEWHKPLIPAQGVYSHL*CFQSHT Trigger: GGTATGGCTTTGGAAACAGCACAGATGAGAGTAAAC...TCCCTGGGCTGGGATTAGAGGTTTGTGCCACTCTACCTCATTGGATTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR-3UTR GCA 90 bp | AGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGTACACAATGTTATGCTaGAAATCCTCCAGCAAGTGT | + |
Preference number: 2 (lower is better) Translates to: SRSSLTCHCSPYSWYKFKYTMLC*KSSSKC Trigger: ACACTTGCTGGAGGATTTGCAGCATAACATTGTGTA...CTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR-3UTR CCA 90 bp | CTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGCGATACTCATCCAGCTaGCACTCTAACTTTTCCCTG | + |
Preference number: 2 (lower is better) Translates to: LNCRLSMDSHLSTVKENQRYSSS*HSNFSL Trigger: CAGGGAAAAGTTAGAGTGCCAGCTGGATGAGTATCG...CTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CCA 90 bp | AGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGTATAATGACGAAGCTTaGTTTGTCCATCTGCTTTCC | + |
Preference number: 2 (lower is better) Translates to: SRSSLTCHCSPYSWYKFKYNDEA*FVHLLS Trigger: GGAAAGCAGATGGACAAACCAAGCTTCGTCATTATA...CTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR-3UTR CCA 90 bp | ATTTCAATTAACCACTGCAAACAATCAATGTGGCCCTGTCCAGCAGCTTTATGCAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 2 (lower is better) Translates to: ISINHCKQSMWPCPAALCRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...GCATAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCAGTGGTTAATTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR-3UTR CCA 90 bp | TTCTGCTTTAAATCCTCTTCGGTTATCCCACCCAAGTGTTTAAAGTTGCTCTCAAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 2 (lower is better) Translates to: FCFKSSSVIPPKCLKLLSRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...TGAGAGCAACTTTAAACACTTGGGTGGGATAACCGAAGAGGATTTAAAGCAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CCA 90 bp | ATGGGAGTTGATCCATTATCATCGCGTTCATTCAGATTGATTACCCCGTCTCCTATCATCATGATCATCTaGATGGCTTCCTTCATACTG | + |
Preference number: 2 (lower is better) Translates to: MGVDPLSSRSFRLITPSPIIMII*MASFIL Trigger: CAGTATGAAGGAAGCCATCCAGATGATCATGATGAT...AGGAGACGGGGTAATCAATCTGAATGAACGCGATGATAATGGATCAACTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR CAA 90 bp | GCTTTATGCATGGGAGTTGATCCATTATCATCGCGTTCATTCAGATaGATTACCCCGTCTCCTATCAGTTTCTTAAGCACTTCTAAGTCA | + |
Preference number: 2 (lower is better) Translates to: ALCMGVDPLSSRSFR*ITPSPISFLSTSKS Trigger: TGACTTAGAAGTGCTTAAGAAACTGATAGGAGACGGGGTAATCAATCTGAATGAACGCGATGATAATGGATCAACTCCCATGCATAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR-3UTR TCA 90 bp | TTCTGCTTTAAATCCTCTTCGGTTATCCCACCCAAGTGTTTAAAGTTGCTCTCAAAGGCTAAATCATCATaGTCATCTGGATGGCTTCCT | + |
Preference number: 2 (lower is better) Translates to: FCFKSSSVIPPKCLKLLSKAKSS*SSGWLP Trigger: AGGAAGCCATCCAGATGATCATGATGATTTAGCCTT...TGAGAGCAACTTTAAACACTTGGGTGGGATAACCGAAGAGGATTTAAAGCAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR TCA 90 bp | TTTCTTGACAGCAGTCTAAGTCTTATCCCTCTGCAGTCTCTTTTTCATCGTTTACCATCTGCTTTCCTTTaGAGTAAAGCTTCTAGGGCT | + |
Preference number: 2 (lower is better) Translates to: FLDSSLSLIPLQSLFHRLPSAFL*SKASRA Trigger: AGCCCTAGAAGCTTTACTTCAAAGGAAAGCAGATGG...TAAACGATGAAAAAGAGACTGCAGAGGGATAAGACTTAGACTGCTGTCAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR-3UTR TCA 90 bp | AACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATCACATCTCTCTACAGTaGAGGAAAATCAGGATGTAT | + |
Preference number: 2 (lower is better) Translates to: NCRLSMDSHLSTVKENQDHISLQ*RKIRMY Trigger: ATACATCCTGATTTTCCTTCACTGTAGAGAGATGTG...ATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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3UTR-3UTR TCA 90 bp | AACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATTTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTG | + |
Preference number: 2 (lower is better) Translates to: NCRLSMDSHLSTVKENQDFLHYH*RLLRLV Trigger: CACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAA...ATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CAA 90 bp | TTCTGCTTTAAATCCTCTTCGGTTATCCCACCCAAGTGTTTAAAGTaGCTCTCAGCGATTTCAAGAAGTTGTCTCAATTCTACAATTTTC | + |
Preference number: 2 (lower is better) Translates to: FCFKSSSVIPPKCLK*LSAISRSCLNSTIF Trigger: GAAAATTGTAGAATTGAGACAACTTCTTGAAATCGCTGAGAGCAACTTTAAACACTTGGGTGGGATAACCGAAGAGGATTTAAAGCAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR TCA 72 bp | CTGGTGACCTGGATTTTCTGCAGCGTTTCCTTGAGTTaGTCCACTTCCACTCGATACTCATCCAGCTGGCAC | + |
Preference number: 3 (lower is better) Translates to: LVTWIFCSVSLS*STSTRYSSSWH Trigger: GTGCCAGCTGGATGAGTATCGAGTGGAAGTGGATCAACTCAAGGAAACGCTGCAGAAAATCCAGGTCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CCA 72 bp | TTCTGTAGCCCCTCCAAGAGTTTCACTGCAGCCAAATaGGCAAATCTCTTAGCCACATCACTGGGGGTCTCT | + |
Preference number: 3 (lower is better) Translates to: FCSPSKSFTAAK*ANLLATSLGVS Trigger: AGAGACCCCCAGTGATGTGGCTAAGAGATTTGCCCATTTGGCTGCAGTGAAACTCTTGGAGGGGCTACAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CAA 90 bp | AGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGTCCAAAGCCATACCATaGAGAGGCAGGAAGAGCTGG | + |
Preference number: 3 (lower is better) Translates to: SRSSLTCHCSPYSWYKFKSKAIP*RGRKSW Trigger: CCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGA...CTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR TCA 72 bp | CATTGTAGTCCACGTCTTCGATGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAACCAAGCCGCCCATGAA | + |
Preference number: 3 (lower is better) Translates to: HCSPRLRCHIPI*QEVASNQAAHE Trigger: TTCATGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCATCGAAGACGTGGACTACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR GCA 72 bp | AGGAGACCTCTTAGCCACATCACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCTTTCGGCTCCCATTTC | + |
Preference number: 3 (lower is better) Translates to: RRPLSHITGGLS*FVGNIAFGSHF Trigger: GAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGGTCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207151.2 |
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3UTR GCA 72 bp | GGCAAATCTCTTAGCCACATCACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCTTTCGGCTCCCATTTC | + |
Preference number: 3 (lower is better) Translates to: GKSLSHITGGLS*FVGNIAFGSHF Trigger: GAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGATTTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR TCA 72 bp | TTACTCTCATCTGTGCTGTTTCCAAAGCCATACCATTaGGAGGCAGGAAGAGCTGGCAGTTTTCCTCACTCA | + |
Preference number: 3 (lower is better) Translates to: LLSSVLFPKPYH*EAGRAGSFPHS Trigger: TGAGTGAGGAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAGATGAGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR GCA 72 bp | AAGAAGTTGCAAGCAACCAAGCCGCCCATGAAAAGATaGATAATGCACAGGTTTCCACTCTCTCTTGTCAGT | + |
Preference number: 3 (lower is better) Translates to: KKLQATKPPMKR*IMHRFPLSLVS Trigger: ACTGACAAGAGAGAGTGGAAACCTGTGCATTATGCATCTTTTCATGGGCGGCTTGGTTGCTTGCAACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR CCA 72 bp | TCAGTAGGAATTTCAAACAATGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGAGGTTTCCATTGTAGT | + |
Preference number: 3 (lower is better) Translates to: SVGISNNGGGLP*LLNEPGGFHCS Trigger: ACTACAATGGAAACCTCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCTACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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3UTR-3UTR CAA 90 bp | ATTGCTTTAAAGAGGAGACCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTTCTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 3 (lower is better) Translates to: IALKRRPLSHITGGLSCFLLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...AAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGGTCTCCTCTTTAAAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207151.2 |
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3UTR TCA 72 bp | AATGTGGCCCTGTCCAGCAGCTTTATGCATGGGAGTTaGTCCATTATCATCGCGTTCATTCAGATTGATTAC | + |
Preference number: 3 (lower is better) Translates to: NVALSSSFMHGS*SIIIAFIQIDY Trigger: GTAATCAATCTGAATGAACGCGATGATAATGGATCAACTCCCATGCATAAAGCTGCTGGACAGGGCCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR GCA 72 bp | CTCTGCAGTCTCTTTTTCATCGTTTACTCTCATCTGTaGTGTTTCCAAAGCCATACCATTGAGAGGCAGGAA | + |
Preference number: 3 (lower is better) Translates to: LCSLFFIVYSHL*CFQSHTIERQE Trigger: TTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAGATGAGAGTAAACGATGAAAAAGAGACTGCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR TCA 72 bp | GCTGGGCCAGGTCCAATACATTTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTGTTGCACTGTTCATTC | + |
Preference number: 3 (lower is better) Translates to: AGPGPIHFLHYH*RLLRLVLHCSF Trigger: GAATGAACAGTGCAACACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAAATGTATTGGACCTGGCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR GCA 72 bp | GTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTaGAAACAATCAATGTGGCCCTGTCCAGCAGCTTTA | + |
Preference number: 3 (lower is better) Translates to: VILLSAPISINH*KQSMWPCPAAL Trigger: TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR-3UTR CAA 90 bp | CCCATTTCAATTAACCACTGCAAACAATCAATGTGGCCCTGTCCAGCAGCTTTACTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 3 (lower is better) Translates to: PISINHCKQSMWPCPAALLLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCAGTGGTTAATTGAAATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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3UTR TCA 72 bp | ACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTaGAGGAAAATCAGGATGTATTTAACCTTACTGCAC | + |
Preference number: 3 (lower is better) Translates to: TAGFLWIHISLQ*RKIRMYLTLLH Trigger: GTGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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3UTR TCA 72 bp | TGTAGCCCATACTCATGGTATAAATTCAAGCAGTTCTaGATGATCAGAATACACAATGTTATGCTGCAAATC | + |
Preference number: 3 (lower is better) Translates to: CSPYSWYKFKQF*MIRIHNVMLQI Trigger: GATTTGCAGCATAACATTGTGTATTCTGATCATTCAGAACTGCTTGAATTTATACCATGAGTATGGGCTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCTGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFCKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR GCA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTCATTTGACAAGAAGTTaGAAGCAACCAAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTHLTRS*KQPSRP Trigger: TGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATG...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | TGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGATGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: CCSLHRMYSLQTLQRACGCLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...TCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR TCA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTTTAAAGGCAGCCACATaGCCTGGAAAGGCTAAATCA | + |
Preference number: 4 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTLKAAT*PGKAKS Trigger: TGATTTAGCCTTTCCAGGTCATGTGGCTGCCTTTAA...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR GCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFTMSDS*LTSPAR Trigger: CCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGT...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR CCA 90 bp | TTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCCTCACTCATGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGA | + |
Preference number: 4 (lower is better) Translates to: FQSHTIERQEELAVFLTHGGGLP*LLNEPG Trigger: TCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCC...ATGAGTGAGGAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR TCA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTCATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | CTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGTGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: LNCRLSMDSHLSTVKENQCLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...CTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
||
CDS-3UTR TCA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCATGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSCLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CTGAGCCCCCTGAATAAACTCTACAACATTCTGTTTCAAAAACCGCTGGGCCAGACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: LSPLNKLYNILFQKPLGQTLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...CTGGCCCAGCGGTTTTTGAAACAGAATGTTGTAGAGTTTATTCAGGGGGCTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
||
CDS-3UTR TCA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | TTTCCTCACTCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: FPHSCAPCDVGEAMVIMTILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...CGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGAGTGAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR CCA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTAATGTACCTTCTTCCTaGAACTTGAGTCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTNVPSS*NLSLQS Trigger: AGACTGCAGACTCAAGTTCCAGGAAGAAGGTACATT...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR TCA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACCTTCTTCCTGGAACTTaGGTCTGCAGTCTCCCTACG | + |
Preference number: 4 (lower is better) Translates to: AAHSIECTHYKLFKGLVDLLPGT*VCSLPT Trigger: CGTAGGGAGACTGCAGACTCAAGTTCCAGGAAGAAG...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR TCA 90 bp | TCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGAAGCTTGGTCTTCTTCCTGGAACTTaGGTCTGCAGTCTCCCTACG | + |
Preference number: 4 (lower is better) Translates to: SCAPCDVGEAMVIMTKLGLLPGT*VCSLPT Trigger: CGTAGGGAGACTGCAGACTCAAGTTCCAGGAAGAAG...ACCAAGCTTCGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR TCA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: AAHSIECTHYKLFKGLVDTLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | TGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGAATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: CCSLHRMYSLQTLQRACGILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...TCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCCATTTGACAAGAAGTTaGAAGCAACCAAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFHLTRS*KQPSRP Trigger: TGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATG...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR CAA 72 bp | CACGTCTTCGATGCCACATCCCCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCCATGAAAAGATGCATA | + |
Preference number: 4 (lower is better) Translates to: HVFDATSPFDKK*QATKPPMKRCI Trigger: TATGCATCTTTTCATGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCATCGAAGACGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CTGTTCATTCTACTCAGTAGGAATTTCAAACAATGGAGGTGGCCTTCCATGGCTCTTCTTCCTGGAACTTaGGTCTGCAGTCTCCCTACG | + |
Preference number: 4 (lower is better) Translates to: LFILLSRNFKQWRWPSMALLPGT*VCSLPT Trigger: CGTAGGGAGACTGCAGACTCAAGTTCCAGGAAGAAG...AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCTACTGAGTAGAATGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGATGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: AHCYGLCSHFEMSSPKERCLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | TTATCATTGAAGGCTTTTAAGGCTTGTGTTGCACTGTTCATTCTACTCAGTAGGTGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: LSLKAFKACVALFILLSRCLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...CCTACTGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAGCCTTCAATGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCATGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSCKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR GCA 90 bp | CTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: LQAFYGFTSLYSEGKSGCILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...ACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR CCA 90 bp | CTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGA | + |
Preference number: 4 (lower is better) Translates to: LQAFYGFTSLYSEGKSGCGGGLP*LLNEPG Trigger: TCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCC...ACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCTGCAAACAATCAATGTaGCCCTGTCCAGCAGCTTTA | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFCKQSM*PCPAAL Trigger: TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCA...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | CTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTCTTCTTCCTGGAACTTaGGTCTGCAGTCTCCCTACG | + |
Preference number: 4 (lower is better) Translates to: LQAFYGFTSLYSEGKSGCLLPGT*VCSLPT Trigger: CGTAGGGAGACTGCAGACTCAAGTTCCAGGAAGAAG...ACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCTTGTCTGACAGCTGCTTaGCATCTCCAGCCCGGACCG | + |
Preference number: 4 (lower is better) Translates to: QNTQCYAANPPASVNINACLTAA*HLQPGP Trigger: CGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACA...AGCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | CTACAACATTCTGTTTCAAAAACCGCTGGGCCAGGTCCAATACATTTTCTCCATACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: LQHSVSKTAGPGPIHFLHTLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...ATGGAGAAAATGTATTGGACCTGGCCCAGCGGTTTTTGAAACAGAATGTTGTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCAAGGCTAAATCATCATaGTCATCTGGATGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFKAKSS*SSGWLP Trigger: AGGAAGCCATCCAGATGATCATGATGATTTAGCCTT...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACAGCGTTTCCTTGAGTTaGTCCACTTCCACTCGATAC | + |
Preference number: 4 (lower is better) Translates to: AAHSIECTHYKLFKGLVDSVSLS*STSTRY Trigger: GTATCGAGTGGAAGTGGATCAACTCAAGGAAACGCT...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | TTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGTCTGCAGCGTTTCCTTaGGTTGATCCACTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: FPLLNCRLSMDSHLSTVKSAAFP*VDPLPL Trigger: GAGTGGAAGTGGATCAACTCAAGGAAACGCTGCAGA...CTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | ATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: IQHFPLLNCRLSMDSHLSTMSDS*LTSPAR Trigger: CCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGT...AGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR GCA 90 bp | CTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: LLNCRLSMDSHLSTVKENILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...ATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR GCA 90 bp | ACAGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCACCGCCCATGAAAAGATaGATAATGCACAGGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: TAGQASPATVAHTHGINSPPMKR*IMHRFP Trigger: TGGAAACCTGTGCATTATGCATCTTTTCATGGGCGG...TGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR GCA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCCTTGGCATCGGTaGTTCCTTCAACACCATGCC | + |
Preference number: 4 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSHPWHR*FLQHHA Trigger: GGCATGGTGTTGAAGGAAGCACCGATGCCAAGGATG...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | TTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCCTCACTCATAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 4 (lower is better) Translates to: FQSHTIERQEELAVFLTHRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...ATGAGTGAGGAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR CAA 72 bp | TTTACTCTCATCTGTGCTGTTTCCAAAGCCATACCATaGAGAGGCAGGAAGAGCTGGCAGTTTTCCTCACTC | + |
Preference number: 4 (lower is better) Translates to: FTLICAVSKAIP*RGRKSWQFSSL Trigger: GAGTGAGGAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAGATGAGAGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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3UTR CAA 72 bp | GACCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCGGCTCCCATTTCAATT | + |
Preference number: 4 (lower is better) Translates to: DLLATSLGVSPA*LVILLSAPISI Trigger: AATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGTGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVCKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGTGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKECKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGCAGTTCTTTAAAGGCAGCCACATaGCCTGGAAAGGCTAAATCA | + |
Preference number: 4 (lower is better) Translates to: QASPATVAHTHGINSSSSLKAAT*PGKAKS Trigger: TGATTTAGCCTTTCCAGGTCATGTGGCTGCCTTTAA...AGAACTGCTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR GCA 90 bp | CTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: LLNCRLSMDSHLSTVKENTMSDS*LTSPAR Trigger: CCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGT...ATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR GCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKEILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR GCA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAATCCTGACCCCGGATTaGAGCTATGTGAGCCGCTGT | + |
Preference number: 4 (lower is better) Translates to: AHCYGLCSHFEMSSPKERILTPD*SYVSRC Trigger: ACAGCGGCTCACATAGCTGCAATCCGGGGTCAGGAT...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR GCA 90 bp | TCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCT | + |
Preference number: 4 (lower is better) Translates to: SPSELQAFYGFTSLYSEGTGGLS*FVGNIA Trigger: AGCAATATTACCAACAAAGCAGGAGAGACCCCCAGT...TCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | CAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCAAGCAGTTCTACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCT | + |
Preference number: 4 (lower is better) Translates to: QASPATVAHTHGINSSSSTGGLS*FVGNIA Trigger: AGCAATATTACCAACAAAGCAGGAGAGACCCCCAGT...AGAACTGCTTGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGA | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNEGGGLP*LLNEPG Trigger: TCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCC...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR CCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAGGAGGTGGCCTTCCATaGCTGCTAAATGAACCGGGA | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKEGGGLP*LLNEPG Trigger: TCCCGGTTCATTTAGCAGCCATGGAAGGCCACCTCC...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
||
CDS-3UTR CCA 90 bp | GCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 4 (lower is better) Translates to: AAAHSIECTHYKLFKGLVRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...CACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CCA 90 bp | TGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACGATACTCATCCAGCTaGCACTCTAACTTTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: CCSLHRMYSLQTLQRACGRYSSS*HSNFSL Trigger: CAGGGAAAAGTTAGAGTGCCAGCTGGATGAGTATCG...TCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAACTTCTTCCTGGAACTTaGGTCTGCAGTCTCCCTACG | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKELLPGT*VCSLPT Trigger: CGTAGGGAGACTGCAGACTCAAGTTCCAGGAAGAAG...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
||
CDS-3UTR TCA 90 bp | TCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGAAGCTTGGTCATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: SCAPCDVGEAMVIMTKLGHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...ACCAAGCTTCGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKETLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
||
CDS-3UTR TCA 90 bp | TCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGAAGCTTGGTTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: SCAPCDVGEAMVIMTKLGCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...ACCAAGCTTCGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR TCA 90 bp | GATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCATGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: DSHLSTVKENQDVFNLTACKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...TGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
||
CDS-3UTR TCA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCATGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAAC | + |
Preference number: 4 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSCHIPI*QEVASN Trigger: GTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCA...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
||
CDS-3UTR TCA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCTTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: LCCFQSHTIERQEELAVFFLHYH*RLLRLV Trigger: CACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAA...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
||
CDS-3UTR GCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVTMSDS*LTSPAR Trigger: CCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGT...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGG | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKETMSDS*LTSPAR Trigger: CCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGT...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR GCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGCATCCTTGGCATCGGTaGTTCCTTCAACACCATGCC | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVHPWHR*FLQHHA Trigger: GGCATGGTGTTGAAGGAAGCACCGATGCCAAGGATG...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
||
CDS-3UTR CCA 90 bp | TTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 4 (lower is better) Translates to: FPLLNCRLSMDSHLSTVKRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...CTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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3UTR CAA 72 bp | AATCTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCGGCTCCCATTTCAATT | + |
Preference number: 4 (lower is better) Translates to: NLLATSLGVSPA*LVILLSAPISI Trigger: AATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCTACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: QNTQCYAANPPASVNINATLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...AGCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | GTCCAGCAGCTTTATGCATGGGAGTTGATCCATTATCATCGCGTTCATTCAGATTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: VQQLYAWELIHYHRVHSDCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...ATCTGAATGAACGCGATGATAATGGATCAACTCCCATGCATAAAGCTGCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CCAAAGGAAAGAGAACTAATACTATCATCTAATATCATCTTCCAGCTGAGAATGTGTAAGCAGGCATCCTaGCCCCGGATTGCAGCTATG | + |
Preference number: 4 (lower is better) Translates to: PKERELILSSNIIFQLRMCKQAS*PRIAAM Trigger: CATAGCTGCAATCCGGGGTCAGGATGCCTGCTTACA...CATTCTCAGCTGGAAGATGATATTAGATGATAGTATTAGTTCTCTTTCCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGTCTGCAGCGTTTCCTTaGGTTGATCCACTTCCACTC | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVSAAFP*VDPLPL Trigger: GAGTGGAAGTGGATCAACTCAAGGAAACGCTGCAGA...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | CTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCATTTGACAAGAAGTTaGAAGCAACCAAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: LLNCRLSMDSHLSTVKENHLTRS*KQPSRP Trigger: TGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATG...ATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | TTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGTGTCCAGCAGCTTTATaGATGGGAGTTGATCCATTA | + |
Preference number: 4 (lower is better) Translates to: FPLLNCRLSMDSHLSTVKCPAAL*MGVDPL Trigger: TAATGGATCAACTCCCATGCATAAAGCTGCTGGACA...CTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | CCAACAGCAACAAAACAATCCAATGAGGTAGAGTGGCACAAACCTCTAATCCCAAATGTACCTTCTTCCTaGAACTTGAGTCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: PTATKQSNEVEWHKPLIPNVPSS*NLSLQS Trigger: AGACTGCAGACTCAAGTTCCAGGAAGAAGGTACATT...TGGGATTAGAGGTTTGTGCCACTCTACCTCATTGGATTGTTTTGTTGCTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CCA 90 bp | TTTCCTCACTCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGATCATCATGATCATCTaGATGGCTTCCTTCATACTG | + |
Preference number: 4 (lower is better) Translates to: FPHSCAPCDVGEAMVIMTIIMII*MASFIL Trigger: CAGTATGAAGGAAGCCATCCAGATGATCATGATGAT...CGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGAGTGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CCA 90 bp | CTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGTTCACTGCAGCCAAATaGGCAAATCTCTTAGCCACA | + |
Preference number: 4 (lower is better) Translates to: LNCRLSMDSHLSTVKENQFTAAK*ANLLAT Trigger: TGTGGCTAAGAGATTTGCCCATTTGGCTGCAGTGAA...CTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | AACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATCGATACTCATCCAGCTaGCACTCTAACTTTTCCCTG | + |
Preference number: 4 (lower is better) Translates to: NCRLSMDSHLSTVKENQDRYSSS*HSNFSL Trigger: CAGGGAAAAGTTAGAGTGCCAGCTGGATGAGTATCG...ATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | AACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATCGCTCGGTTTCAAAATaGACTCAGTTTCCACTCCAC | + |
Preference number: 4 (lower is better) Translates to: NCRLSMDSHLSTVKENQDRSVSK*TQFPLH Trigger: GTGGAGTGGAAACTGAGTCCATTTTGAAACCGAGCG...ATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAACATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: PSELQAFYGFTSLYSEGKHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...TTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | ATTTCAATTAACCACTGCAAACAATCAATGTGGCCCTGTCCAGCAGCTTTATGCCATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: ISINHCKQSMWPCPAALCHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...GCATAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCAGTGGTTAATTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCC | + |
Preference number: 4 (lower is better) Translates to: LSMDSHLSTVKENQDVFNTLHYV*QLLDIS Trigger: GGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGT...GTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: LNCRLSMDSHLSTVKENQCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...CTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CTGAATAAACTCTACAACATTCTGTTTCAAAAACCGCTGGGCCAGGTCCAATACTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: LNKLYNILFQKPLGQVQYCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...GTATTGGACCTGGCCCAGCGGTTTTTGAAACAGAATGTTGTAGAGTTTATTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAATGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAAC | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNECHIPI*QEVASN Trigger: GTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCA...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAATGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAAC | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKECHIPI*QEVASN Trigger: GTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCA...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR TCA 90 bp | AACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATTTAAAGGCAGCCACATaGCCTGGAAAGGCTAAATCA | + |
Preference number: 4 (lower is better) Translates to: NCRLSMDSHLSTVKENQDLKAAT*PGKAKS Trigger: TGATTTAGCCTTTCCAGGTCATGTGGCTGCCTTTAA...ATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR TCA 90 bp | TCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCACTGAGCGTTTCCTTGAGTTaGTCCACTTCCACTCGATAC | + |
Preference number: 4 (lower is better) Translates to: SHLSTVKENQDVFNLTALSVSLS*STSTRY Trigger: GTATCGAGTGGAAGTGGATCAACTCAAGGAAACGCT...CAGTGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGCATTTGACAAGAAGTTaGAAGCAACCAAGCCGCCCA | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKEHLTRS*KQPSRP Trigger: TGGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATG...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCAAATGTACCTTCTTCCTaGAACTTGAGTCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSNVPSS*NLSLQS Trigger: AGACTGCAGACTCAAGTTCCAGGAAGAAGGTACATT...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR CCA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTATGAGCTCTCATTCTaGCATTTGCTTTGTCTGATT | + |
Preference number: 4 (lower is better) Translates to: AAHSIECTHYKLFKGLVDYELSF*HLLCLI Trigger: AATCAGACAAAGCAAATGCCAGAATGAGAGCTCATA...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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3UTR CAA 72 bp | ATGGGAGTTGATCCATTATCATCGCGTTCATTCAGATaGATTACCCCGTCTCCTATCAGTTTCTTAAGCACT | + |
Preference number: 4 (lower is better) Translates to: MGVDPLSSRSFR*ITPSPISFLST Trigger: AGTGCTTAAGAAACTGATAGGAGACGGGGTAATCAATCTGAATGAACGCGATGATAATGGATCAACTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000126305.8 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | TCAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCTGCCACATCCCCATTTaGCAAGAAGTTGCAAGCAAC | + |
Preference number: 4 (lower is better) Translates to: SEYTMLCCKSSSKCQYKCCHIPI*QEVASN Trigger: GTTGCTTGCAACTTCTTGTCAAATGGGGATGTGGCA...GCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR TCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAATTAAAGGCAGCCACATaGCCTGGAAAGGCTAAATCA | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKELKAAT*PGKAKS Trigger: TGATTTAGCCTTTCCAGGTCATGTGGCTGCCTTTAA...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR GCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGCCGCCCATGAAAAGATaGATAATGCACAGGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVPPMKR*IMHRFP Trigger: TGGAAACCTGTGCATTATGCATCTTTTCATGGGCGG...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCT | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVTGGLS*FVGNIA Trigger: AGCAATATTACCAACAAAGCAGGAGAGACCCCCAGT...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CCA 90 bp | TTAAGTCCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGAATGTACCTTCTTCCTaGAACTTGAGTCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: LSPFDIQHFPLLNCRLSMNVPSS*NLSLQS Trigger: AGACTGCAGACTCAAGTTCCAGGAAGAAGGTACATT...CATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGGACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR CCA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAAGGAATTTCAAACAATaGAGGTGGCCTTCCATGGCT | + |
Preference number: 4 (lower is better) Translates to: AHCYGLCSHFEMSSPKERRNFKQ*RWPSMA Trigger: AGCCATGGAAGGCCACCTCCATTGTTTGAAATTCCT...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | ATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTATCATCATGATCATCTaGATGGCTTCCTTCATACTG | + |
Preference number: 4 (lower is better) Translates to: IQHFPLLNCRLSMDSHLSIIMII*MASFIL Trigger: CAGTATGAAGGAAGCCATCCAGATGATCATGATGAT...AGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
||
CDS-3UTR CCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAATGCAAACAATCAATGTaGCCCTGTCCAGCAGCTTTA | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNECKQSM*PCPAAL Trigger: TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCA...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGTGCAAACAATCAATGTaGCCCTGTCCAGCAGCTTTA | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKECKQSM*PCPAAL Trigger: TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCA...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGTTCACTGCAGCCAAATaGGCAAATCTCTTAGCCACA | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVFTAAK*ANLLAT Trigger: TGTGGCTAAGAGATTTGCCCATTTGGCTGCAGTGAA...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | TTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: FDIQHFPLLNCRLSMDSHHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...ATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR TCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGCATCATGTATGCTACTaGAATGTACCTTCTTCCTGG | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKEHHVCY*NVPSSW Trigger: CCAGGAAGAAGGTACATTTCAGTAGCATACATGATG...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAAAGGCTAAATCATCATaGTCATCTGGATGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNEKAKSS*SSGWLP Trigger: AGGAAGCCATCCAGATGATCATGATGATTTAGCCTT...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | TTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATAAGGCTAAATCATCATaGTCATCTGGATGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: FDIQHFPLLNCRLSMDSHKAKSS*SSGWLP Trigger: AGGAAGCCATCCAGATGATCATGATGATTTAGCCTT...ATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR TCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGAAGGCTAAATCATCATaGTCATCTGGATGGCTTCCT | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKEKAKSS*SSGWLP Trigger: AGGAAGCCATCCAGATGATCATGATGATTTAGCCTT...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR GCA 90 bp | GATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCACCGCCCATGAAAAGATaGATAATGCACAGGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: DSHLSTVKENQDVFNLTAPPMKR*IMHRFP Trigger: TGGAAACCTGTGCATTATGCATCTTTTCATGGGCGG...TGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | ATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAACCGCCCATGAAAAGATaGATAATGCACAGGTTTCCA | + |
Preference number: 4 (lower is better) Translates to: MLTVMDFVLILKCLPQRKPPMKR*IMHRFP Trigger: TGGAAACCTGTGCATTATGCATCTTTTCATGGGCGG...TTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR GCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGTGTCCAGCAGCTTTATaGATGGGAGTTGATCCATTA | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVCPAAL*MGVDPL Trigger: TAATGGATCAACTCCCATGCATAAAGCTGCTGGACA...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR GCA 90 bp | ATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCT | + |
Preference number: 4 (lower is better) Translates to: MLTVMDFVLILKCLPQRKTGGLS*FVGNIA Trigger: AGCAATATTACCAACAAAGCAGGAGAGACCCCCAGT...TTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGAATGTACCTTCTTCCTaGAACTTGAGTCTGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKENVPSS*NLSLQS Trigger: AGACTGCAGACTCAAGTTCCAGGAAGAAGGTACATT...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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3UTR CAA 72 bp | AAATCCTCTTCGGTTATCCCACCCAAGTGTTTAAAGTaGCTCTCAGCGATTTCAAGAAGTTGTCTCAATTCT | + |
Preference number: 4 (lower is better) Translates to: KSSSVIPPKCLK*LSAISRSCLNS Trigger: AGAATTGAGACAACTTCTTGAAATCGCTGAGAGCAACTTTAAACACTTGGGTGGGATAACCGAAGAGGATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126305.8 |
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CDS-3UTR GCA 90 bp | CAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCTTGTCCAGCAGCTTTATaGATGGGAGTTGATCCATTA | + |
Preference number: 4 (lower is better) Translates to: QNTQCYAANPPASVNINACPAAL*MGVDPL Trigger: TAATGGATCAACTCCCATGCATAAAGCTGCTGGACA...AGCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CCA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGATCATCATGATCATCTaGATGGCTTCCTTCATACTG | + |
Preference number: 4 (lower is better) Translates to: HRMYSLQTLQRACGLNEVIIMII*MASFIL Trigger: CAGTATGAAGGAAGCCATCCAGATGATCATGATGAT...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CCA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAATCATCATGATCATCTaGATGGCTTCCTTCATACTG | + |
Preference number: 4 (lower is better) Translates to: DAHCYGLCSHFEMSSPKEIIMII*MASFIL Trigger: CAGTATGAAGGAAGCCATCCAGATGATCATGATGAT...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAACAGCAGCTTTATGCATaGGAGTTGATCCATTATCAT | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNEQQLYA*ELIHYH Trigger: ATGATAATGGATCAACTCCCATGCATAAAGCTGCTG...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CCA 90 bp | TCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCACTGCAGCAGCTTTATGCATaGGAGTTGATCCATTATCAT | + |
Preference number: 4 (lower is better) Translates to: SHLSTVKENQDVFNLTALQQLYA*ELIHYH Trigger: ATGATAATGGATCAACTCCCATGCATAAAGCTGCTG...CAGTGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CCA 90 bp | TTTCTTGACAGCAGTCTAAGTCTTATCCCTCTGCAGTCTCTTTTTCATCGTTTACAGCAGCTTTATGCATaGGAGTTGATCCATTATCAT | + |
Preference number: 4 (lower is better) Translates to: FLDSSLSLIPLQSLFHRLQQLYA*ELIHYH Trigger: ATGATAATGGATCAACTCCCATGCATAAAGCTGCTG...TAAACGATGAAAAAGAGACTGCAGAGGGATAAGACTTAGACTGCTGTCAAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CCA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGCAGCAGCTTTATGCATaGGAGTTGATCCATTATCAT | + |
Preference number: 4 (lower is better) Translates to: LTVMDFVLILKCLPQRKEQQLYA*ELIHYH Trigger: ATGATAATGGATCAACTCCCATGCATAAAGCTGCTG...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACTGCAAACAATCAATGTaGCCCTGTCCAGCAGCTTTA | + |
Preference number: 4 (lower is better) Translates to: LSMDSHLSTVKENQDVFNCKQSM*PCPAAL Trigger: TAAAGCTGCTGGACAGGGCCACATTGATTGTTTGCA...GTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR TCA 90 bp | CCAAAGGAAAGAGAACTAATACTATCATCTAATATCATCTTCCAGCTGAGAATGTGTAAAGGAGTAAACTaGTGGAGAGCATCCACTTCA | + |
Preference number: 4 (lower is better) Translates to: PKERELILSSNIIFQLRMCKGVN*WRASTS Trigger: TGAAGTGGATGCTCTCCATCAGTTTACTCCTTTACA...CATTCTCAGCTGGAAGATGATATTAGATGATAGTATTAGTTCTCTTTCCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR TCA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAATTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: LHRMYSLQTLQRACGLNEFLHYH*RLLRLV Trigger: CACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAA...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR TCA 90 bp | TCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCACTGTTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: SHLSTVKENQDVFNLTALFLHYH*RLLRLV Trigger: CACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAA...CAGTGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR GCA 90 bp | CCAAAGGAAAGAGAACTAATACTATCATCTAATATCATCTTCCAGCTGAGAATGTGTCCAGCAGCTTTATaGATGGGAGTTGATCCATTA | + |
Preference number: 4 (lower is better) Translates to: PKERELILSSNIIFQLRMCPAAL*MGVDPL Trigger: TAATGGATCAACTCCCATGCATAAAGCTGCTGGACA...CATTCTCAGCTGGAAGATGATATTAGATGATAGTATTAGTTCTCTTTCCTTTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR TCA 90 bp | CCAAAGGAAAGAGAACTAATACTATCATCTAATATCATCTTCCAGCTGAGAATGTTTCTCCATTATCATTaGAGGCTTTTAAGGCTTGTG | + |
Preference number: 4 (lower is better) Translates to: PKERELILSSNIIFQLRMFLHYH*RLLRLV Trigger: CACAAGCCTTAAAAGCCTTCAATGATAATGGAGAAA...CATTCTCAGCTGGAAGATGATATTAGATGATAGTATTAGTTCTCTTTCCTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CCA 90 bp | CTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACTATGAGCTCTCATTCTaGCATTTGCTTTGTCTGATT | + |
Preference number: 4 (lower is better) Translates to: LSMDSHLSTVKENQDVFNYELSF*HLLCLI Trigger: AATCAGACAAAGCAAATGCCAGAATGAGAGCTCATA...GTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | CTGTGCTGTTTCCAAAGCCATACCATTGAGAGGCAGGAAGAGCTGGCAGTTTTCCATCCTGACCCCGGATaGCAGCTATGTGAGCCGCTG | + |
Preference number: 5 (lower is better) Translates to: LCCFQSHTIERQEELAVFHPDPG*QLCEPL Trigger: CAGCGGCTCACATAGCTGCAATCCGGGGTCAGGATG...GAAAACTGCCAGCTCTTCCTGCCTCTCAATGGTATGGCTTTGGAAACAGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTCCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCC | + |
Preference number: 5 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTPFDKK*QATKPP Trigger: GGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGG...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS TCA 90 bp | GAGAGCATCCACTTCATTAAGGTTGGCACCACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCCAGCCCGGACCGCATCATGTATGCT | + |
Preference number: 5 (lower is better) Translates to: ESIHFIKVGTTLHYV*QLLDISSPDRIMYA Trigger: AGCATACATGATGCGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGTGGTGCCAACCTTAATGAAGTGGATGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR CAA 90 bp | TGCCGCCGCTGCTGCCGCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCG | + |
Preference number: 5 (lower is better) Translates to: CRRCCRCCSLHRMYSLQTGVSPA*LVILLS Trigger: CGAAAGCAATATTACCAACAAAGCAGGAGAGACCCC...AGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGCGGCAGCAGCGGCGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS GCA 90 bp | TCCACTTCATTAAGGTTGGCACCACGCTCCACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGGACCGCATCATGTATGCTACTGAAA | + |
Preference number: 5 (lower is better) Translates to: STSLRLAPRSTMSDS*LTSPARTASCMLLK Trigger: TTTCAGTAGCATACATGATGCGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGTGGTGCCAACCTTAATGAAGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR CAA 90 bp | TGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACATCCTGACCCCGGATaGCAGCTATGTGAGCCGCTG | + |
Preference number: 5 (lower is better) Translates to: CCSLHRMYSLQTLQRACGHPDPG*QLCEPL Trigger: CAGCGGCTCACATAGCTGCAATCCGGGGTCAGGATG...TCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCCTGACCCCGGATaGCAGCTATGTGAGCCGCTG | + |
Preference number: 5 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSHPDPG*QLCEPL Trigger: CAGCGGCTCACATAGCTGCAATCCGGGGTCAGGATG...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR CAA 90 bp | GCTGCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGGTTTCCACTCTCTCTaGTCAGTCACGCTGGGATCC | + |
Preference number: 5 (lower is better) Translates to: AAAHSIECTHYKLFKGLVGFHSL*SVTLGS Trigger: GGATCCCAGCGTGACTGACAAGAGAGAGTGGAAACC...CACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | ACAGCAGGTCAAGCCTCACCTGCCACTGTAGCCCATACTCATGGTATAAATTCACCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCC | + |
Preference number: 5 (lower is better) Translates to: TAGQASPATVAHTHGINSPFDKK*QATKPP Trigger: GGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGG...TGAATTTATACCATGAGTATGGGCTACAGTGGCAGGTGAGGCTTGACCTGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS TCA 90 bp | CTTGTAGTTGTCTGTGTGGCATCAGCACCACTCCAGAGTAGCCAGTaGAGGCACTCTAAACTTCCAGAATGTGCTGCCCAATGTAAAGGA | + |
Preference number: 5 (lower is better) Translates to: LVVVCVASAPLQSSQ*RHSKLPECAAQCKG Trigger: TCCTTTACATTGGGCAGCACATTCTGGAAGTTTAGAGTGCCTTCACTGGCTACTCTGGAGTGGTGCTGATGCCACACAGACAACTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR CAA 90 bp | TTAAGTCCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGCATCCTGACCCCGGATaGCAGCTATGTGAGCCGCTG | + |
Preference number: 5 (lower is better) Translates to: LSPFDIQHFPLLNCRLSMHPDPG*QLCEPL Trigger: CAGCGGCTCACATAGCTGCAATCCGGGGTCAGGATG...CATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGGACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118157.8 ENSMUST00000126305.8 |
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CDS-3UTR CAA 90 bp | CCAACAGCAACAAAACAATCCAATGAGGTAGAGTGGCACAAACCTCTAATCCCAGGTTTCCACTCTCTCTaGTCAGTCACGCTGGGATCC | + |
Preference number: 5 (lower is better) Translates to: PTATKQSNEVEWHKPLIPGFHSL*SVTLGS Trigger: GGATCCCAGCGTGACTGACAAGAGAGAGTGGAAACC...TGGGATTAGAGGTTTGTGCCACTCTACCTCATTGGATTGTTTTGTTGCTGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGACATCCTGACCCCGGATaGCAGCTATGTGAGCCGCTG | + |
Preference number: 5 (lower is better) Translates to: AHCYGLCSHFEMSSPKERHPDPG*QLCEPL Trigger: CAGCGGCTCACATAGCTGCAATCCGGGGTCAGGATG...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS-3UTR CAA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCAGGTTTCCACTCTCTCTaGTCAGTCACGCTGGGATCC | + |
Preference number: 5 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSGFHSL*SVTLGS Trigger: GGATCCCAGCGTGACTGACAAGAGAGAGTGGAAACC...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | CAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACACCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCC | + |
Preference number: 5 (lower is better) Translates to: QHFPLLNCRLSMDSHLSTPFDKK*QATKPP Trigger: GGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGG...TGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | CTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGGGTTTCCACTCTCTCTaGTCAGTCACGCTGGGATCC | + |
Preference number: 5 (lower is better) Translates to: LTVMDFVLILKCLPQRKEGFHSL*SVTLGS Trigger: GGATCCCAGCGTGACTGACAAGAGAGAGTGGAAACC...CTCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | ACAAAACAATCCAATGAGGTAGAGTGGCACAAACCTCTAATCCCAGCCCAGGGACTTTATGCATGGGAGTaGATCCATTATCATCGCGTT | + |
Preference number: 5 (lower is better) Translates to: TKQSNEVEWHKPLIPAQGLYAWE*IHYHRV Trigger: AACGCGATGATAATGGATCAACTCCCATGCATAAAG...TCCCTGGGCTGGGATTAGAGGTTTGTGCCACTCTACCTCATTGGATTGTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACCTTTATGCATGGGAGTaGATCCATTATCATCGCGTT | + |
Preference number: 5 (lower is better) Translates to: AAHSIECTHYKLFKGLVDLYAWE*IHYHRV Trigger: AACGCGATGATAATGGATCAACTCCCATGCATAAAG...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACGCTTTGTTGGTAATATaGCTTTCGGCTCCCATTTCA | + |
Preference number: 5 (lower is better) Translates to: AAHSIECTHYKLFKGLVDALLVI*LSAPIS Trigger: TGAAATGGGAGCCGAAAGCAATATTACCAACAAAGC...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | TCATGTGCACCATGTGATGTGGGTGAGGCAATGGTTATAATGACGAAGCTTGGTGCTTTGTTGGTAATATaGCTTTCGGCTCCCATTTCA | + |
Preference number: 5 (lower is better) Translates to: SCAPCDVGEAMVIMTKLGALLVI*LSAPIS Trigger: TGAAATGGGAGCCGAAAGCAATATTACCAACAAAGC...ACCAAGCTTCGTCATTATAACCATTGCCTCACCCACATCACATGGTGCACATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | ATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCG | + |
Preference number: 5 (lower is better) Translates to: IQHFPLLNCRLSMDSHLSGVSPA*LVILLS Trigger: CGAAAGCAATATTACCAACAAAGCAGGAGAGACCCC...AGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | ATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAACCATTTGACAAGAAGTaGCAAGCAACCAAGCCGCCC | + |
Preference number: 5 (lower is better) Translates to: MLTVMDFVLILKCLPQRKPFDKK*QATKPP Trigger: GGGCGGCTTGGTTGCTTGCAACTTCTTGTCAAATGG...TTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACCTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 5 (lower is better) Translates to: AAHSIECTHYKLFKGLVDLLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | CCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAAGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCT | + |
Preference number: 5 (lower is better) Translates to: PSELQAFYGFTSLYSEGKVSPAL*VILLSA Trigger: AGCCGAAAGCAATATTACCAACAAAGCAGGAGAGAC...TTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | GCTGCTCACTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACATTCTGGCATTTGCTTaGTCTGATTCACTCAGACAT | + |
Preference number: 5 (lower is better) Translates to: AAHSIECTHYKLFKGLVDILAFA*SDSLRH Trigger: ATGTCTGAGTGAATCAGACAAAGCAAATGCCAGAAT...GTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAGTGAGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | TTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGCCCAAGTGTTTAAAGTaGCTCTCAGCGATTTCAAGA | + |
Preference number: 5 (lower is better) Translates to: FPLLNCRLSMDSHLSTVKPKCLK*LSAISR Trigger: TCTTGAAATCGCTGAGAGCAACTTTAAACACTTGGG...CTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | TTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCACATCTCTCTACAGTGAAGCTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 5 (lower is better) Translates to: FPLLNCRLSMDSHLSTVKLLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...CTTCACTGTAGAGAGATGTGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | TTTCTTGACAGCAGTCTAAGTCTTATCCCTCTGCAGTCTCTTTTTCATCGTTTAGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCG | + |
Preference number: 5 (lower is better) Translates to: FLDSSLSLIPLQSLFHRLGVSPA*LVILLS Trigger: CGAAAGCAATATTACCAACAAAGCAGGAGAGACCCC...TAAACGATGAAAAAGAGACTGCAGAGGGATAAGACTTAGACTGCTGTCAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCG | + |
Preference number: 5 (lower is better) Translates to: DAHCYGLCSHFEMSSPKEGVSPA*LVILLS Trigger: CGAAAGCAATATTACCAACAAAGCAGGAGAGACCCC...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | CTCCATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCT | + |
Preference number: 5 (lower is better) Translates to: LHRMYSLQTLQRACGLNEVSPAL*VILLSA Trigger: AGCCGAAAGCAATATTACCAACAAAGCAGGAGAGAC...TTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATGGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | TTTCTTGACAGCAGTCTAAGTCTTATCCCTCTGCAGTCTCTTTTTCATCGTTTAGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCT | + |
Preference number: 5 (lower is better) Translates to: FLDSSLSLIPLQSLFHRLVSPAL*VILLSA Trigger: AGCCGAAAGCAATATTACCAACAAAGCAGGAGAGAC...TAAACGATGAAAAAGAGACTGCAGAGGGATAAGACTTAGACTGCTGTCAAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | CCCTTTGATATACAGCATTTTCCCCTTCTGAACTGCAGGCTTTCTATGGATTCAATTCTGGCATTTGCTTaGTCTGATTCACTCAGACAT | + |
Preference number: 5 (lower is better) Translates to: PFDIQHFPLLNCRLSMDSILAFA*SDSLRH Trigger: ATGTCTGAGTGAATCAGACAAAGCAAATGCCAGAAT...TGAATCCATAGAAAGCCTGCAGTTCAGAAGGGGAAAATGCTGTATATCAAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGACTTTATGCATGGGAGTaGATCCATTATCATCGCGTT | + |
Preference number: 5 (lower is better) Translates to: AHCYGLCSHFEMSSPKERLYAWE*IHYHRV Trigger: AACGCGATGATAATGGATCAACTCCCATGCATAAAG...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | TCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTACTGCACTGGCTTTGTTGGTAATATaGCTTTCGGCTCCCATTTCA | + |
Preference number: 5 (lower is better) Translates to: SHLSTVKENQDVFNLTALALLVI*LSAPIS Trigger: TGAAATGGGAGCCGAAAGCAATATTACCAACAAAGC...CAGTGCAGTAAGGTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS-3UTR CAA 90 bp | GCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGAGCTTTGTTGGTAATATaGCTTTCGGCTCCCATTTCA | + |
Preference number: 5 (lower is better) Translates to: AHCYGLCSHFEMSSPKERALLVI*LSAPIS Trigger: TGAAATGGGAGCCGAAAGCAATATTACCAACAAAGC...TCTTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | ATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAAAGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCT | + |
Preference number: 5 (lower is better) Translates to: MLTVMDFVLILKCLPQRKVSPAL*VILLSA Trigger: AGCCGAAAGCAATATTACCAACAAAGCAGGAGAGAC...TTTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | CATAGAATGTACTCACTACAAACTCTTCAAAGGGCTTGTGGACTAAATGAAGTGCCCAAGTGTTTAAAGTaGCTCTCAGCGATTTCAAGA | + |
Preference number: 5 (lower is better) Translates to: HRMYSLQTLQRACGLNEVPKCLK*LSAISR Trigger: TCTTGAAATCGCTGAGAGCAACTTTAAACACTTGGG...CACTTCATTTAGTCCACAAGCCCTTTGAAGAGTTTGTAGTGAGTACATTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056106.14 |
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CDS-3UTR CAA 90 bp | GATGCTCACTGTTATGGACTTTGTTCTCATTTTGAAATGTCTTCCCCAAAGGAACTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 5 (lower is better) Translates to: DAHCYGLCSHFEMSSPKELLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...TTCCTTTGGGGAAGACATTTCAAAATGAGAACAAAGTCCATAACAGTGAGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000207131.2 |
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CDS-3UTR CAA 90 bp | TCAGAATACACAATGTTATGCTGCAAATCCTCCAGCAAGTGTCAATATAAATGCCTTTTAAGGCTTGTGTaGCACTGTTCATTCTACTCA | + |
Preference number: 5 (lower is better) Translates to: SEYTMLCCKSSSKCQYKCLLRLV*HCSFYS Trigger: TGAGTAGAATGAACAGTGCAACACAAGCCTTAAAAG...GCATTTATATTGACACTTGCTGGAGGATTTGCAGCATAACATTGTGTATTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS-3UTR CAA 90 bp | CTTTCTATGGATTCACATCTCTCTACAGTGAAGGAAAATCAGGATGTATTTAACCTTTATGCATGGGAGTaGATCCATTATCATCGCGTT | + |
Preference number: 5 (lower is better) Translates to: LSMDSHLSTVKENQDVFNLYAWE*IHYHRV Trigger: AACGCGATGATAATGGATCAACTCCCATGCATAAAG...GTTAAATACATCCTGATTTTCCTTCACTGTAGAGAGATGTGAATCCATAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118157.8 |
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CDS TCA 72 bp | CACTTCATTAAGGTTGGCACCACGCTCCACTATGTCTaGCAGCTGCTTGACATCTCCAGCCCGGACCGCATC | + |
Preference number: 6 (lower is better) Translates to: HFIKVGTTLHYV*QLLDISSPDRI Trigger: GATGCGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGTGGTGCCAACCTTAATGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS GCA 72 bp | TTAAGGTTGGCACCACGCTCCACTATGTCTGACAGCTaGTTGACATCTCCAGCCCGGACCGCATCATGTATG | + |
Preference number: 6 (lower is better) Translates to: LRLAPRSTMSDS*LTSPARTASCM Trigger: CATACATGATGCGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGTGGTGCCAACCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS TCA 72 bp | GTCTGTGTGGCATCAGCACCACTCCAGAGTAGCCAGTaGAGGCACTCTAAACTTCCAGAATGTGCTGCCCAA | + |
Preference number: 6 (lower is better) Translates to: VCVASAPLQSSQ*RHSKLPECAAQ Trigger: TTGGGCAGCACATTCTGGAAGTTTAGAGTGCCTTCACTGGCTACTCTGGAGTGGTGCTGATGCCACACAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS CAA 90 bp | ACTTCATTAAGGTTGGCACCACGCTCCACTATGTCTGACAGCTGCTaGACATCTCCAGCCCGGACCGCATCATGTATGCTACTGAAATGT | + |
Preference number: 6 (lower is better) Translates to: TSLRLAPRSTMSDSC*TSPARTASCMLLKC Trigger: ACATTTCAGTAGCATACATGATGCGGTCCGGGCTGGAGATGTCAAGCAGCTGTCAGACATAGTGGAGCGTGGTGCCAACCTTAATGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS TCA 72 bp | GCAGCAAGGTGTAGTGGGGTGCATCCACGATCATCTTaGGTTGCTAGGTTGGCTCCATTGATTATAAGAGCC | + |
Preference number: 6 (lower is better) Translates to: AARCSGVHPRSS*VARLAPLIIRA Trigger: GGCTCTTATAATCAATGGAGCCAACCTAGCAACTCAAGATGATCGTGGATGCACCCCACTACACCTTGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000056106.14 ENSMUST00000118157.8 ENSMUST00000126305.8 ENSMUST00000138267.2 ENSMUST00000207131.2 ENSMUST00000207151.2 |
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CDS GCA 72 bp | CAAGACACTCTTAGCCACATCACTGGGGGTCTCTCCTaGTTTGTTGGTAATATTGCTTTCGGCTCCCATTTC | + |
Preference number: 6 (lower is better) Translates to: QDTLSHITGGLS*FVGNIAFGSHF Trigger: GAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGTGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS CAA 90 bp | CTAGACAAGACACTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTGC | + |
Preference number: 6 (lower is better) Translates to: LDKTLLATSLGVSPA*LVILLSAPISINHC Trigger: GCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGTGTCTTGTCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS CAA 90 bp | GACAAGACACTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTTGTaGGTAATATTGCTTTCGGCTCCCATTTCAATTAACCACTGCAAA | + |
Preference number: 6 (lower is better) Translates to: DKTLLATSLGVSPAL*VILLSAPISINHCK Trigger: TTTGCAGTGGTTAATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGTGTCTTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |
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CDS CAA 72 bp | ACACTCTTAGCCACATCACTGGGGGTCTCTCCTGCTTaGTTGGTAATATTGCTTTCGGCTCCCATTTCAATT | + |
Preference number: 6 (lower is better) Translates to: TLLATSLGVSPA*LVILLSAPISI Trigger: AATTGAAATGGGAGCCGAAAGCAATATTACCAACAAAGCAGGAGAGACCCCCAGTGATGTGGCTAAGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138267.2 |