Pregenerated sensors for ANKRD40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020864Ensembl transcript IDs: ENSMUST00000021227.6, ENSMUST00000051221.13, ENSMUST00000107818.9, ENSMUST00000149867.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGGGGTGTTAGTGAACACTACGCAGTGGCACCAGGGGCCCTGGTaGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GGVLVNTTQWHQGPW*AYEALGSMACPLAQ Trigger: CTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGTTCACTAACACCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR TCA 90 bp | GACACTGGGCAGAGCCATGTGGGCCACCACAACCTTTGGTCAGTCTaGAGTGCTTGCTTGCTCCTCTGTAGCCCACCTCCCAGCCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DTGQSHVGHHNLWSV*SACLLLCSPPPSQL Trigger: GAGCTGGCTGGGAGGTGGGCTACAGAGGAGCAAGCAAGCACTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGCTCTGCCCAGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 90 bp | GCCCGAGACACTGACCCCAGAGGACTGTGGCAAAGCACAGGACACTaGGCAGAGCCATGTGGGCCACCACAACCTTTGGTCAGTCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: ARDTDPRGLWQSTGH*AEPCGPPQPLVSLK Trigger: CTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGCTCTGCCCAGTGTCCTGTGCTTTGCCACAGTCCTCTGGGGTCAGTGTCTCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 90 bp | CCCCAGAGGACTGTGGCAAAGCACAGGACACTGGGCAGAGCCATGTaGGCCACCACAACCTTTGGTCAGTCTGAAGTGCTTGCTTGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PQRTVAKHRTLGRAM*ATTTFGQSEVLACS Trigger: GGAGCAAGCAAGCACTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGCTCTGCCCAGTGTCCTGTGCTTTGCCACAGTCCTCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR TCA 90 bp | TCACCTAAGAGCAATCACACAGTTCCATCCCACTGCCCGAGACACTaGCCCCAGAGGACTGTGGCAAAGCACAGGACACTGGGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: SPKSNHTVPSHCPRH*PQRTVAKHRTLGRA Trigger: GGCTCTGCCCAGTGTCCTGTGCTTTGCCACAGTCCTCTGGGGTCAGTGTCTCGGGCAGTGGGATGGAACTGTGTGATTGCTCTTAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 90 bp | GCCATGTGGGCCACCACAACCTTTGGTCAGTCTGAAGTGCTTGCTTaGTCCTCTGTAGCCCACCTCCCAGCCAGCTCTACTGCTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: AMWATTTFGQSEVLA*SSVAHLPASSTASQ Trigger: CTGAGAAGCAGTAGAGCTGGCTGGGAGGTGGGCTACAGAGGAGCAAGCAAGCACTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 90 bp | ACACTCTACAAGGGAAGTCACCAGCTGTGCCAGGGCCAGGCACCATaGAGTCACCTCACAGTGACCCACACAGTGACACTGGCTTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: TLYKGSHQLCQGQAP*SHLTVTHTVTLALK Trigger: CTTCAAAGCCAGTGTCACTGTGTGGGTCACTGTGAGGTGACTGCATGGTGCCTGGCCCTGGCACAGCTGGTGACTTCCCTTGTAGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 90 bp | GATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTaGGGCCCTGGGACAGACAGAACTCAGGTCTTCAGGCTTTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: DQRATCGNWFSPSTM*GPGTDRTQVFRLCS Trigger: ACTGCAAAGCCTGAAGACCTGAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR CCA 90 bp | ACACTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTaGGATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGT | + |
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Preference number: 1 (lower is better) Translates to: TLRSGTRGPGGHTRL*DQWLVLWPRDDTYC Trigger: ACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR GCA 90 bp | GGGTCCCGTCAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTTGTGTaGGCCAGGTCCTATCTATCTAAAGTTAAGCAAACCGAGGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: GSRQQLLQPCSPALV*ARSYLSKVKQTEVA Trigger: AGCCACCTCGGTTTGCTTAACTTTAGATAGATAGGACCTGGCGCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTGACGGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 90 bp | AGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATaGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACT | + |
|
Preference number: 1 (lower is better) Translates to: SGTRGPGGHTRLWDQ*LVLWPRDDTYCHST Trigger: AGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR TCA 90 bp | GCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGATaGCACATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: AYEALGSMACPLAQR*HILSQYSVMKSLLH Trigger: ATGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
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| 3UTR CCA 90 bp | CATTTGTTCGTTTTGTGTGCACACATTTGTGTTATAATGCACATGTaGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCAC | + |
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Preference number: 1 (lower is better) Translates to: HLFVLCAHICVIMHM*RSEGNLWELVLSFH Trigger: GTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTGCATTATAACACAAATGTGTGCACACAAAACGAACAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR TCA 90 bp | TCAACAACACACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTaGACACATGCTTTAACTATGCAGTGGAGGAGGAGAGGAGCATTC | + |
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Preference number: 1 (lower is better) Translates to: STTHEEKSSVNVYTV*THALTMQWRRRGAF Trigger: GAATGCTCCTCTCCTCCTCCACTGCATAGTTAAAGCATGTGTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTGTGTTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 90 bp | ACACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTGAACACATaGTTTAACTATGCAGTGGAGGAGGAGAGGAGCATTCAGTTAACA | + |
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Preference number: 1 (lower is better) Translates to: TRGKVFCECLHSVNT*FNYAVEEERSIQLT Trigger: TGTTAACTGAATGCTCCTCTCCTCCTCCACTGCATAGTTAAAGCATGTGTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTGGTGCCTCTACCCACTaGGCCAACTTGCCAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: HVEIRGQPVGTGSLLPPCGASTH*ANLPAQ Trigger: TTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACC...ACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR CAA 90 bp | GCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTaGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGT | + |
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Preference number: 2 (lower is better) Translates to: APGALVGIRGFGING*SFGPEMTHTVTVLS Trigger: ACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR CAA 90 bp | AGCAGGGGTCCCGTCAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTaGTGTGCGCCAGGTCCTATCTATCTAAAGTTAAGCAAACCGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRGPVNSCSSPVLLL*CAPGPIYLKLSKPR Trigger: CCTCGGTTTGCTTAACTTTAGATAGATAGGACCTGGCGCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTGACGGGACCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR GCA 90 bp | CATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTCAGGTCTTCAGGCTTTaGAGTAGGTGCCTCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: HVEIRGQPVGTGSLLPPCQVFRL*SRCLYP Trigger: TGGGTAGAGGCACCTACTGCAAAGCCTGAAGACCTG...ACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCCTGCTCTTGTGTGCGCCAGGTCCTATCTATCTAAAGTTAAGCAAACCTCTCAGCTTCTGCTTTaGCAACTCTCTAGATCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CSPALVCARSYLSKVKQTSQLLL*QLSRSC Trigger: GCAGGATCTAGAGAGTTGTCAAAGCAGAAGCTGAGA...GGTTTGCTTAACTTTAGATAGATAGGACCTGGCGCACACAAGAGCAGGAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCAACAACACACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTGAACTCTCCTGCTCTTGTGTaGGCCAGGTCCTATCTATCT | + |
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Preference number: 2 (lower is better) Translates to: RVNNTRGKVFCECLHSVNSPALV*ARSYLS Trigger: AGATAGATAGGACCTGGCGCACACAAGAGCAGGAGA...GTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTGTGTTGTTGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTCTGCCTCTCAAGACTACTTTCCAGCTGTTCAAAGATTCAGCAATAGTTTACAATGGCTTGTCCTTTaGCCCAGAGATGACACATAC | + |
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Preference number: 2 (lower is better) Translates to: ASASQDYFPAVQRFSNSLQWLVL*PRDDTY Trigger: GTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTG...TAAACTATTGCTGAATCTTTGAACAGCTGGAAAGTAGTCTTGAGAGGCAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR GCA 90 bp | AACAACACACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTGAACACATGCAAGGTTCTCTTCCAGTaGATCTGCATGTTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: NNTRGKVFCECLHSVNTCKVLFQ*ICMFSV Trigger: GACTGAAAACATGCAGATGCACTGGAAGAGAACCTT...GCATGTGTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTGTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | CATCCCACTGCCCGAGACACTGACCCCAGAGGACTGTaGCAAAGCACAGGACACTGGGCAGAGCCATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: HPTARDTDPRGL*QSTGHWAEPCG Trigger: CCCACATGGCTCTGCCCAGTGTCCTGTGCTTTGCCACAGTCCTCTGGGGTCAGTGTCTCGGGCAGTGGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | AAGGGAAGTCACCAGCTGTGCCAGGGCCAGGCACCATaGAGTCACCTCACAGTGACCCACACAGTGACACTG | + |
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Preference number: 3 (lower is better) Translates to: KGSHQLCQGQAP*SHLTVTHTVTL Trigger: CAGTGTCACTGTGTGGGTCACTGTGAGGTGACTGCATGGTGCCTGGCCCTGGCACAGCTGGTGACTTCCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | AGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTaGGATCAATGGCTTGTCCTTTGGCCCAGAGATGAC | + |
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Preference number: 3 (lower is better) Translates to: SGTRGPGGHTRL*DQWLVLWPRDD Trigger: GTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | GCACGCCCGGCCCTTCAGGCGCACTGTCAACAGGAGTaGCTAGAAATAGGTCTGCGCTCTCAGCTTCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: ARPALQAHCQQE*LEIGLRSQLLL Trigger: AAGCAGAAGCTGAGAGCGCAGACCTATTTCTAGCCACTCCTGTTGACAGTGCGCCTGAAGGGCCGGGCGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGGGGTCCCGTCAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTTGTGTGCCTCAAAAGCTGCTCTTaGTTCCTGGAGGGAGTGAGA | + |
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Preference number: 3 (lower is better) Translates to: QQGSRQQLLQPCSPALVCLKSCS*FLEGVR Trigger: TCTCACTCCCTCCAGGAACAAAGAGCAGCTTTTGAG...GCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTGACGGGACCCCTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR TCA 72 bp | GGTGGGCGCCTTGTCCAACAGCGCCTGTGCTCTTCTTaGATGGTGCAATTAGACAGGGTGACAGGAGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: GGRLVQQRLCSS*MVQLDRVTGVA Trigger: GGCCACTCCTGTCACCCTGTCTAATTGCACCATTCAAGAAGAGCACAGGCGCTGTTGGACAAGGCGCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR TCA 72 bp | CAGAGCCATGTGGGCCACCACAACCTTTGGTCAGTCTaGAGTGCTTGCTTGCTCCTCTGTAGCCCACCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QSHVGHHNLWSV*SACLLLCSPPP Trigger: GGGAGGTGGGCTACAGAGGAGCAAGCAAGCACTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | GGCCCTGGGACAGACAGAACTCAGGTCTTCAGGCTTTaGAGTAGGTGCCTCTACCCACTGAGCCAACTTGCC | + |
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Preference number: 3 (lower is better) Translates to: GPGTDRTQVFRL*SRCLYPLSQLA Trigger: GGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCAAAGCCTGAAGACCTGAGTTCTGTCTGTCCCAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR CCA 72 bp | TGCACATGTGGAGATCAGAGGGCAACCTGTGGGAACTaGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: CTCGDQRATCGN*FSPSTMWGPGT Trigger: TGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR TCA 72 bp | AGCAATCACACAGTTCCATCCCACTGCCCGAGACACTaGCCCCAGAGGACTGTGGCAAAGCACAGGACACTG | + |
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Preference number: 3 (lower is better) Translates to: SNHTVPSHCPRH*PQRTVAKHRTL Trigger: CAGTGTCCTGTGCTTTGCCACAGTCCTCTGGGGTCAGTGTCTCGGGCAGTGGGATGGAACTGTGTGATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | ACTACGCAAACACTCTACAAGGGAAGTCACCAGCTGTaGCAGGGCCAGGCACCATGCAGTCACCTCACAGTG | + |
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Preference number: 3 (lower is better) Translates to: TTQTLYKGSHQL*QGQAPCSHLTV Trigger: CACTGTGAGGTGACTGCATGGTGCCTGGCCCTGGCACAGCTGGTGACTTCCCTTGTAGAGTGTTTGCGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | TGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTaGGACAGACAGAACTCAGGTCTTCAGGCTTTGCAG | + |
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Preference number: 3 (lower is better) Translates to: WELVLSFHHVGP*DRQNSGLQALQ Trigger: CTGCAAAGCCTGAAGACCTGAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR CCA 72 bp | GTGTTAGTGAACACTACGCAGTGGCACCAGGGGCCCTaGTGGGCATACGAGGCTTTGGGATCAATGGCTTGT | + |
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Preference number: 3 (lower is better) Translates to: VLVNTTQWHQGP*WAYEALGSMAC Trigger: ACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGTTCACTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | ACAGACAGAACTCAGGTCTTCAGGCTTTGCAGTAGGTaGCTCTACCCACTGAGCCAACTTGCCAGCCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: TDRTQVFRLCSR*LYPLSQLASPR Trigger: CCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCAAAGCCTGAAGACCTGAGTTCTGTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| 3UTR CCA 72 bp | AGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATaGCTTGTCCTTTGGCCCAGAGATGACACATACTGT | + |
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Preference number: 3 (lower is better) Translates to: RGPGGHTRLWDQ*LVLWPRDDTYC Trigger: ACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | ACTGTGGCAAAGCACAGGACACTGGGCAGAGCCATGTaGGCCACCACAACCTTTGGTCAGTCTGAAGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: TVAKHRTLGRAM*ATTTFGQSEVL Trigger: AAGCACTTCAGACTGACCAAAGGTTGTGGTGGCCCACATGGCTCTGCCCAGTGTCCTGTGCTTTGCCACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | CAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTTGTGTaGGCCAGGTCCTATCTATCTAAAGTTAAGCAAACC | + |
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Preference number: 3 (lower is better) Translates to: QQLLQPCSPALV*ARSYLSKVKQT Trigger: GGTTTGCTTAACTTTAGATAGATAGGACCTGGCGCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR CCA 72 bp | GGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTaGCCCAGAGATGACACATACTGTCACAGTACTCAG | + |
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Preference number: 3 (lower is better) Translates to: GHTRLWDQWLVL*PRDDTYCHSTQ Trigger: CTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR TCA 72 bp | TCCCCAGTCTTCCTCCCTCATCAGTTCAAAATTTCTTaGGTGTCACGAGCATGCAACACCAAGAGAGGCACG | + |
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Preference number: 3 (lower is better) Translates to: SPVFLPHQFKIS*VSRACNTKRGT Trigger: CGTGCCTCTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGGAAGACTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR TCA 72 bp | GCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGATaGCACATACTGTCACAGTACTCAGTGATGAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: ALGSMACPLAQR*HILSQYSVMKS Trigger: GGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | GGGAGGCCATTACCTCAGCACAAGGTTCTCTTCCAGTaGATCTGCATGTTTTCAGTCAACTGCAGTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: GRPLPQHKVLFQ*ICMFSVNCSVL Trigger: TAGAACACTGCAGTTGACTGAAAACATGCAGATGCACTGGAAGAGAACCTTGTGCTGAGGTAATGGCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | TGCACATTAAACACTGGCTCTCGAACCTTCGGCTTCTaGCTCTCAAGACTACTTTCCAGCTGTTCAAAGATT | + |
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Preference number: 3 (lower is better) Translates to: CTLNTGSRTFGF*LSRLLSSCSKI Trigger: AATCTTTGAACAGCTGGAAAGTAGTCTTGAGAGGCAGAAGCCGAAGGTTCGAGAGCCAGTGTTTAATGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR-3UTR CAA 90 bp | CCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATGCAACACCAAGAGTTCAGCAATAGTTTATaGTGCACCAAGAGGCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: PPSSVQNFLSVTSMQHQEFSNSL*CTKRLG Trigger: TCCAAGCCTCTTGGTGCACAATAAACTATTGCTGAA...CTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR TCA 72 bp | CACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTaGACACATGCTTTAACTATGCAGTGGAGGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: HEEKSSVNVYTV*THALTMQWRRR Trigger: TCTCCTCCTCCACTGCATAGTTAAAGCATGTGTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| 3UTR GCA 72 bp | AAAGTCTTCTGTGAATGTTTACACAGTGTGAACACATaGTTTAACTATGCAGTGGAGGAGGAGAGGAGCATT | + |
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Preference number: 3 (lower is better) Translates to: KVFCECLHSVNT*FNYAVEEERSI Trigger: AATGCTCCTCTCCTCCTCCACTGCATAGTTAAAGCATGTGTTCACACTGTGTAAACATTCACAGAAGACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| 3UTR TCA 72 bp | AATCAACCAGGGAGGCTGAAGGAGTCTCAACCCCAGTaGTTTAGACATGAATTAATACTGAGTTTATTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NQPGRLKESQPQ*FRHELILSLFL Trigger: AAGAAATAAACTCAGTATTAATTCATGTCTAAATCACTGGGGTTGAGACTCCTTCAGCCTCCCTGGTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | CTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGGCATACGTCCCGTTCTaGGGCTCCAGAGACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSGTRGPGGHTRLWDQWAYVPF*GSRDTG Trigger: CCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGC...CCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCCGCAGCCTCTCCTGCTaGTCCTTCTGCTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YAVAPGALVGIRGFGINGRSLSC*SFCSRR Trigger: CCTCCTAGAGCAGAAGGAGCAGCAGGAGAGGCTGCG...GCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | GATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGCATACGTCCCGTTCTaGGGCTCCAGAGACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DQRATCGNWFSPSTMWGPAYVPF*GSRDTG Trigger: CCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGC...AGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | TACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCGCGGTTCTGACTCACTaGTGGCTGACAGACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: YAVAPGALVGIRGFGINGAVLTH*WLTDRT Trigger: GGTCCTGTCTGTCAGCCACCAGTGAGTCAGAACCGC...GCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | TACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCAAATGGCTGGAATGCTaGCGCCGGGCCTGCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: YAVAPGALVGIRGFGINGKWLEC*RRACIR Trigger: ACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTT...GCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | CTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGGACTCCTTCTTCAGCTaGGGGATCTCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSGTRGPGGHTRLWDQWDSFFS*GISSSS Trigger: TGAGGAGGAGGAGATCCCTCAGCTGAAGAAGGAGTC...CCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCGTGAAGAAAAATGGCTaGAATGCTGGCGCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAPGALVGIRGFGINGLSVKKNG*NAGAGP Trigger: AGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCAC...GGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTCCGGTGAAGAAAAATaGCTGGAATGCTGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPGALVGIRGFGINGLSSGEEK*LECWRR Trigger: CCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGA...GGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCCTCTCCACCAGTTTCTaGACCTCCCGAATGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGTGSLLPPCGALGQTELLSTSF*TSRMSP Trigger: GGGGGACATTCGGGAGGTGCAGAAACTGGTGGAGAG...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR GCA 90 bp | GGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTGAAAAATGGCTGGAATaGTGGCGCCGGGCCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GTRGPGGHTRLWDQWLVLEKWLE*WRRACI Trigger: TATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTC...AAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCAGGCGGTTCTGACTCACTaGTGGCTGACAGACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GNWFSPSTMWGPGTDRTQAVLTH*WLTDRT Trigger: GGTCCTGTCTGTCAGCCACCAGTGAGTCAGAACCGC...CTGAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCAGCTCCTGGAAGTCCTaGAGTCGGGCAACATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAPGALVGIRGFGINGLSSSWKS*SRATSL Trigger: CAAAGATGTTGCCCGACTCCAGGACTTCCAGGAGCT...GGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | GGTGTTAGTGAACACTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCAACAGGTCCAGCCGTTaGCCTCATTTTGCGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVSEHYAVAPGALVGIRGNRSSR*PHFASS Trigger: TGAACTCGCAAAATGAGGTCAACGGCTGGACCTGTT...GCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGTTCACTAACACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | TACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCGCAGTTCTTGGTAGGTaGGTTCCTGTCGATCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YAVAPGALVGIRGFGINGAVLGR*VPVDPV Trigger: AACTGGATCGACAGGAACTCACCTACCAAGAACTGC...GCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCGTTGACCTCATTTTaGGAGTTCACATCCACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QWHQGPWWAYEALGSMACPLTSF*EFTSTP Trigger: CGGGGTGGATGTGAACTCGCAAAATGAGGTCAACGG...ACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | ACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTCCACCTGTCCATGGTTaGGTTTACATGCCCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQWHQGPWWAYEALGSMAPPVHG*VYMPSV Trigger: TACACTGGGCATGTAAACGCAACCATGGACAGGTGG...AGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCTCCGGTGAAGAAAAATaGCTGGAATGCTGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CSRCLYPLSQLASPRQQSSGEEK*LECWRR Trigger: CCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGA...GCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGACAGGGTGACAGGAGTGGCCACGGAGCAGGTGGTGGCTCCTTTAGAACCAGTTCCAGCTCCTaGAAGTCCTGGAGTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AIRQGDRSGHGAGGGSFRTSSSS*KSWSRA Trigger: TGCCCGACTCCAGGACTTCCAGGAGCTGGAACTGGT...TCTAAAGGAGCCACCACCTGCTCCGTGGCCACTCCTGTCACCCTGTCTAATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | AACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGGACAAAGGGCAGTTCTaGCTCCTTCTTCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLWELVLSFHHVGPWDRQDKGQF*LLLQLR Trigger: CCTCAGCTGAAGAAGGAGTCAGAACTGCCCTTTGTC...CTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR GCA 90 bp | ACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGCGCAGCCTCTCCTGCTaGTCCTTCTGCTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCGDQRATCGNWFSPSTMRSLSC*SFCSRR Trigger: CCTCCTAGAGCAGAAGGAGCAGCAGGAGAGGCTGCG...CATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | AGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCAATAAATGGCTGGAATGCTaGCGCCGGGCCTGCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLYPLSQLASPRQQSNKWLEC*RRACIR Trigger: ACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTT...ATTGCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GTCTTCAGGCTTTGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAGTGAAGAAAAATGGCTaGAATGCTGGCGCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFRLCSRCLYPLSQLASPVKKNG*NAGAGP Trigger: AGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCAC...TGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCAAAGCCTGAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGAGTGAAGAAAAATGGCTaGAATGCTGGCGCCGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWWAYEALGSMACPLAQRVKKNG*NAGAGP Trigger: AGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCAC...TCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| 3UTR CAA 72 bp | TGGTGGGCGCCTTGTCCAACAGCGCCTGTGCTCTTCTaGAATGGTGCAATTAGACAGGGTGACAGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WWAPCPTAPVLF*NGAIRQGDRSG Trigger: GCCACTCCTGTCACCCTGTCTAATTGCACCATTCAAGAAGAGCACAGGCGCTGTTGGACAAGGCGCCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCGCAGTTCTTGGTAGGTaGGTTCCTGTCGATCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSRCLYPLSQLASPRQQSAVLGR*VPVDPV Trigger: AACTGGATCGACAGGAACTCACCTACCAAGAACTGC...GCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTCTAATCAGGCCCTCACAACTGACTGTGGAGGTAACGGGGAATTCCTACGCAGCCTCTCCTGCTaGTCCTTCTGCTCTAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PESNQALTTDCGGNGEFLRSLSC*SFCSRR Trigger: CCTCCTAGAGCAGAAGGAGCAGCAGGAGAGGCTGCG...TAGGAATTCCCCGTTACCTCCACAGTCAGTTGTGAGGGCCTGATTAGACTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TGTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCCGTTGACCTCATTTTaGGAGTTCACATCCACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CGNWFSPSTMWGPGTDRTPLTSF*EFTSTP Trigger: CGGGGTGGATGTGAACTCGCAAAATGAGGTCAACGG...AGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR GCA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCCCACCTGTCCATGGTTaGGTTTACATGCCCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGTGSLLPPCGALGQTELPPVHG*VYMPSV Trigger: TACACTGGGCATGTAAACGCAACCATGGACAGGTGG...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR GCA 90 bp | TGCACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCGAAAAATGGCTGGAATaGTGGCGCCGGGCCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CTCGDQRATCGNWFSPSTEKWLE*WRRACI Trigger: TATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTC...GGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GCAATTAGACAGGGTGACAGGAGTGGCCACGGAGCAGGTGGTGGCTCCTTTAGAGACACCACCTGTCCATaGTTGCGTTTACATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIRQGDRSGHGAGGGSFRDTTCP*LRLHAQ Trigger: CTGGGCATGTAAACGCAACCATGGACAGGTGGTGTC...TCTAAAGGAGCCACCACCTGCTCCGTGGCCACTCCTGTCACCCTGTCTAATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCCTTTTCCACTTGGTCTaGATTAACACCCAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VAPGALVGIRGFGINGLSLFHLV*INTQLT Trigger: TGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAG...GGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | GTCTTCAGGCTTTGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAACAGGTCCAGCCGTTaGCCTCATTTTGCGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VFRLCSRCLYPLSQLASPNRSSR*PHFASS Trigger: TGAACTCGCAAAATGAGGTCAACGGCTGGACCTGTT...TGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCAAAGCCTGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR TCA 90 bp | CACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGACTCCTTCTTCAGCTaGGGGATCTCCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HMWRSEGNLWELVLSFHHDSFFS*GISSSS Trigger: TGAGGAGGAGGAGATCCCTCAGCTGAAGAAGGAGTC...ATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR TCA 90 bp | GGTGTTAGTGAACACTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTCTGAATCCTCACTTTaGGTACCAGCTCTTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSEHYAVAPGALVGIRGSESSL*VPALAY Trigger: ATATGCAAGAGCTGGTACTCAAAGTGAGGATTCAGA...GCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGTTCACTAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | AGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCAATGACACCACCTGTCCATaGTTGCGTTTACATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRCLYPLSQLASPRQQSNDTTCP*LRLHAQ Trigger: CTGGGCATGTAAACGCAACCATGGACAGGTGGTGTC...ATTGCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACGAAATATCACCATTCTaGACCAATGCCAAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGNLWELVLSFHHVGPWDEISPF*TNAKEL Trigger: CAGCTCTTTGGCATTGGTCCAGAATGGTGATATTTC...GTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GGTGTTAGTGAACACTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCGAAATATCACCATTCTaGACCAATGCCAAAGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVSEHYAVAPGALVGIRGEISPF*TNAKEL Trigger: CAGCTCTTTGGCATTGGTCCAGAATGGTGATATTTC...GCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAGTGTTCACTAACACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCACTTTTCCACTTGGTCTaGATTAACACCCAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GALVGIRGFGINGLSFGPLFHLV*INTQLT Trigger: TGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAG...TGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| 3UTR CAA 72 bp | GCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTaGTCCTTTGGCCCAGAGATGACACATACTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALVGIRGFGING*SFGPEMTHTVT Trigger: TGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| 3UTR CAA 72 bp | CCCGTCAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTaGTGTGCGCCAGGTCCTATCTATCTAAAGTTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVNSCSSPVLLL*CAPGPIYLKLS Trigger: GCTTAACTTTAGATAGATAGGACCTGGCGCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTGACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | CCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATGCAACACCAAGAGGCATACGTCCCGTTCTaGGGCTCCAGAGACACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVQNFLSVTSMQHQEAYVPF*GSRDTG Trigger: CCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGC...CTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCCGAAGAGATGGATTCTaGATCCTCACTTTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VGTGSLLPPCGALGQTELRRDGF*ILTLST Trigger: GGTACTCAAAGTGAGGATTCAGAATCCATCTCTTCG...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | CATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACGCGGTTCTGACTCACTaGTGGCTGACAGACAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: HTRLWDQWLVLWPRDDTYAVLTH*WLTDRT Trigger: GGTCCTGTCTGTCAGCCACCAGTGAGTCAGAACCGC...GTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GGGATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAAATGGCTGGAATGCTaGCGCCGGGCCTGCATACGT | + |
|
Preference number: 4 (lower is better) Translates to: GINGLSFGPEMTHTVTVLKWLEC*RRACIR Trigger: ACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTT...GAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | GCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGTCTGAATCCTCACTTTaGGTACCAGCTCTTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: ALVGIRGFGINGLSFGPESESSL*VPALAY Trigger: ATATGCAAGAGCTGGTACTCAAAGTGAGGATTCAGA...CTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGTCGTACACCATGCTCCAGAGTCTAATCAGGCCCTCACAACTGACTGTTCCGGTGAAGAAAAATaGCTGGAATGCTGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRVVHHAPESNQALTTDCSGEEK*LECWRR Trigger: CCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGA...ACAGTCAGTTGTGAGGGCCTGATTAGACTCTGGAGCATGGTGTACGACTCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCCTTATCTTTTCCACTTaGTCTGGATTAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGTGSLLPPCGALGQTELLIFST*SGLTPS Trigger: GCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAG...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGCTTATCTTTTCCACTTaGTCTGGATTAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVGIRGFGINGLSFGPELIFST*SGLTPS Trigger: GCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAG...CTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCTCTCCACCAGTTTCTaGACCTCCCGAATGTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSFGPEMTHTVTVLSDEVLSTSF*TSRMSP Trigger: GGGGGACATTCGGGAGGTGCAGAAACTGGTGGAGAG...GACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | ACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTTGAGTACCAGCTCTTaGATATTAAATGGAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQWHQGPWWAYEALGSMALSTSS*ILNGNA Trigger: AGCATTTCCATTTAATATGCAAGAGCTGGTACTCAA...AGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCAGGTTTTGTGCTTTCTaGTGTTCTAAGTATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSRCLYPLSQLASPRQQSRFCAF*CSKYGR Trigger: TCTGCCATACTTAGAACACCAGAAAGCACAAAACCT...GCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | GGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTCTCTTGCATATTAAATaGAAATGCTCCGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTRGPGGHTRLWDQWLVLLLHIK*KCSGEE Trigger: TTCTTCACCGGAGCATTTCCATTTAATATGCAAGAG...AAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | CTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGATTTTCACGAAGAGATaGATTCTGAATCCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSGTRGPGGHTRLWDQWIFTKR*ILNPHF Trigger: AAAGTGAGGATTCAGAATCCATCTCTTCGTGAAAAT...CCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | CCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGACTTATCTTTTCCACTTaGTCTGGATTAACACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PWWAYEALGSMACPLAQRLIFST*SGLTPS Trigger: GCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAG...TCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| 3UTR CAA 72 bp | AGTCACCTCACAGTGACCCACACAGTGACACTGGCTTaGAAGAACACCTCAAGCTCATTTCAGCACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHLTVTHTVTLA*KNTSSSFQHSG Trigger: GCCTGAGTGCTGAAATGAGCTTGAGGTGTTCTTCAAAGCCAGTGTCACTGTGTGGGTCACTGTGAGGTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTGACAAAGGGCAGTTCTaGCTCCTTCTTCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGPEMTHTVTVLSDEVPDKGQF*LLLQLR Trigger: CCTCAGCTGAAGAAGGAGTCAGAACTGCCCTTTGTC...AGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCGAAAAATGGCTGGAATaGTGGCGCCGGGCCTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LSFGPEMTHTVTVLSDEVEKWLE*WRRACI Trigger: TATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTC...GACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTCATATTAAATGGAAATaGTCCGGTGAAGAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WHQGPWWAYEALGSMACPHIKWK*SGEEKW Trigger: CCATTTTTCTTCACCGGAGCATTTCCATTTAATATG...AGGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCCTCTTGCATATTAAATaGAAATGCTCCGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSRCLYPLSQLASPRQQSLLHIK*KCSGEE Trigger: TTCTTCACCGGAGCATTTCCATTTAATATGCAAGAG...GCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | ACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGCTTTTCCACTTGGTCTaGATTAACACCCAGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TCGDQRATCGNWFSPSTMLFHLV*INTQLT Trigger: TGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAG...CATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR TCA 90 bp | ATGCACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACTCTGAATCCTCACTTTaGGTACCAGCTCTTGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: MHMWRSEGNLWELVLSFHSESSL*VPALAY Trigger: ATATGCAAGAGCTGGTACTCAAAGTGAGGATTCAGA...GTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR TCA 90 bp | CCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCATCAGCAGTTCTTGGTAGGTaGGTTCCTGTCGATCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEMTHTVTVLSDEVPAASAVLGR*VPVDPV Trigger: AACTGGATCGACAGGAACTCACCTACCAAGAACTGC...TGATGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
||
| CDS-3UTR GCA 90 bp | CCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATGCAACACCAAGAGCCGTTGACCTCATTTTaGGAGTTCACATCCACCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSVQNFLSVTSMQHQEPLTSF*EFTSTP Trigger: CGGGGTGGATGTGAACTCGCAAAATGAGGTCAACGG...CTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | GGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCAGCATATTAAATGGAAATaGTCCGGTGAAGAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GNWFSPSTMWGPGTDRTQHIKWK*SGEEKW Trigger: CCATTTTTCTTCACCGGAGCATTTCCATTTAATATG...CTGAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| 3UTR CAA 72 bp | TTCCCCAGTCTTCCTCCCTCATCAGTTCAAAATTTCTaGAGTGTCACGAGCATGCAACACCAAGAGAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPSLPPSSVQNF*SVTSMQHQERH Trigger: GTGCCTCTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGGAAGACTGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | ATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTAACAGGTCCAGCCGTTaGCCTCATTTTGCGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: INGLSFGPEMTHTVTVLSNRSSR*PHFASS Trigger: TGAACTCGCAAAATGAGGTCAACGGCTGGACCTGTT...ACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR TCA 90 bp | TTCAGCAATAGTTTATTGTGCACCAAGAGGCTTGGAAGAGTGGCACCGCTGCTGCGAAGAGATGGATTCTaGATCCTCACTTTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: FSNSLLCTKRLGRVAPLLRRDGF*ILTLST Trigger: GGTACTCAAAGTGAGGATTCAGAATCCATCTCTTCG...CAGCAGCGGTGCCACTCTTCCAAGCCTCTTGGTGCACAATAAACTATTGCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | ATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCATCAGTACGTCAGTTTTGACACCACCTGTCCATaGTTGCGTTTACATGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSQYSVMKSLLHQYVSFDTTCP*LRLHAQ Trigger: CTGGGCATGTAAACGCAACCATGGACAGGTGGTGTC...AAAACTGACGTACTGATGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
||
| CDS-3UTR GCA 90 bp | ATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCATCAGTACGTCAGTTTTCCACCTGTCCATGGTTaGGTTTACATGCCCAGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILSQYSVMKSLLHQYVSFPPVHG*VYMPSV Trigger: TACACTGGGCATGTAAACGCAACCATGGACAGGTGG...AAAACTGACGTACTGATGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGCCTCTCAAGACTACTTTCCAGCTGTTCAAAGATTCAGCAATAGTTTAGACAAAGGGCAGTTCTaGCTCCTTCTTCAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASASQDYFPAVQRFSNSLDKGQF*LLLQLR Trigger: CCTCAGCTGAAGAAGGAGTCAGAACTGCCCTTTGTC...TAAACTATTGCTGAATCTTTGAACAGCTGGAAAGTAGTCTTGAGAGGCAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | CACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATTTGAGTACCAGCTCTTaGATATTAAATGGAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: HMWRSEGNLWELVLSFHHLSTSS*ILNGNA Trigger: AGCATTTCCATTTAATATGCAAGAGCTGGTACTCAA...ATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTAATCAGGCCCTCACAACTGACTGTGGAGGTAACGGGGAATTCCTACTCTTGCATATTAAATaGAAATGCTCCGGTGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PESNQALTTDCGGNGEFLLLHIK*KCSGEE Trigger: TTCTTCACCGGAGCATTTCCATTTAATATGCAAGAG...TAGGAATTCCCCGTTACCTCCACAGTCAGTTGTGAGGGCCTGATTAGACTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | CATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACCATGTATTTTCACGAAGAGATaGATTCTGAATCCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVEIRGQPVGTGSLLPPCIFTKR*ILNPHF Trigger: AAAGTGAGGATTCAGAATCCATCTCTTCGTGAAAAT...ACATGGTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATGCAACACCAAGACGAAGAGATGGATTCTaGATCCTCACTTTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLISSKFLECHEHATPRRRDGF*ILTLST Trigger: GGTACTCAAAGTGAGGATTCAGAATCCATCTCTTCG...TCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCATTGAGTACCAGCTCTTaGATATTAAATGGAAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPEMTHTVTVLSDEVPAALSTSS*ILNGNA Trigger: AGCATTTCCATTTAATATGCAAGAGCTGGTACTCAA...TGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTAGGTTTTGTGCTTTCTaGTGTTCTAAGTATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFGPEMTHTVTVLSDEVPRFCAF*CSKYGR Trigger: TCTGCCATACTTAGAACACCAGAAAGCACAAAACCT...AGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | AATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATAGGTTTTGTGCTTTCTaGTGTTCTAAGTATGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NGLSFGPEMTHTVTVLSDRFCAF*CSKYGR Trigger: TCTGCCATACTTAGAACACCAGAAAGCACAAAACCT...ATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTCATATTAAATGGAAATaGTCCGGTGAAGAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFGPEMTHTVTVLSDEVPHIKWK*SGEEKW Trigger: CCATTTTTCTTCACCGGAGCATTTCCATTTAATATG...AGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTCAACAACACACGAGGAAAAGTCTTCTGTGAATGTTTACACAGTGTGAACCTCAGTCAGTGTGGATaGAGCGTTTCTAAACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVNNTRGKVFCECLHSVNLSQCG*SVSKQK Trigger: TTTCTGTTTAGAAACGCTGCATCCACACTGACTGAG...GTTCACACTGTGTAAACATTCACAGAAGACTTTTCCTCGTGTGTTGTTGACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS-3UTR CCA 90 bp | GCTTCTGCCTCTCAAGACTACTTTCCAGCTGTTCAAAGATTCAGCAATAGTTTAATTTTCACGAAGAGATaGATTCTGAATCCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASASQDYFPAVQRFSNSLIFTKR*ILNPHF Trigger: AAAGTGAGGATTCAGAATCCATCTCTTCGTGAAAAT...TAAACTATTGCTGAATCTTTGAACAGCTGGAAAGTAGTCTTGAGAGGCAGAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS CCA 90 bp | GGCCTGCATACGTCCCGTTCTGAGGCTCCAGAGACACCGGGGGCTTaGATGGGACAGAGAACAGGGAGCGGTTCTGACTCACTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHTSRSEAPETPGA*MGQRTGSGSDSLVA Trigger: AGCCACCAGTGAGTCAGAACCGCTCCCTGTTCTCTGTCCCATCCAAGCCCCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGCAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CAA 90 bp | CAGCAGGGGTCCCGTCAACAGCTGCTCCAGCCCTGTTCTCCTGCTCTTGTGTGCAGAGACACCGGGGGCTaGGATGGGACAGAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QQGSRQQLLQPCSPALVCRDTGG*DGTENR Trigger: CCTGTTCTCTGTCCCATCCAAGCCCCCGGTGTCTCT...GCACACAAGAGCAGGAGAACAGGGCTGGAGCAGCTGTTGACGGGACCCCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
||
| CDS TCA 90 bp | AAAAATGGCTGGAATGCTGGCGCCGGGCCTGCATACGTCCCGTTCTaGGGCTCCAGAGACACCGGGGGCTTGGATGGGACAGAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNGWNAGAGPAYVPF*GSRDTGGLDGTENR Trigger: CCTGTTCTCTGTCCCATCCAAGCCCCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS GCA 90 bp | AAATGCTCCGGTGAAGAAAAATGGCTGGAATGCTGGCGCCGGGCCTaGATACGTCCCGTTCTGAGGCTCCAGAGACACCGGGGGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KCSGEEKWLECWRRA*IRPVLRLQRHRGLG Trigger: TCCAAGCCCCCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CAA 90 bp | CAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTGCCGTTGACCTCATTTaGCGAGTTCACATCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: QWHQGPWWAYEALGSMACAVDLI*RVHIHP Trigger: GGGGTGGATGTGAACTCGCAAAATGAGGTCAACGGC...ACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CAA 90 bp | CTACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCACTCTCAGCAGTTCTaGGTAGGTGAGTTCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRSGTRGPGGHTRLWDQWHSQQF*VGEFLS Trigger: CGACAGGAACTCACCTACCAAGAACTGCTGAGAGTG...CCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CAA 90 bp | TACGCAGTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCCACTCTCAGCAGTTCTaGGTAGGTGAGTTCCTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: YAVAPGALVGIRGFGINGHSQQF*VGEFLS Trigger: CGACAGGAACTCACCTACCAAGAACTGCTGAGAGTG...GCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCACTGCGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
||
| CDS-3UTR CAA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCGCCGTTGACCTCATTTaGCGAGTTCACATCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGTGSLLPPCGALGQTELAVDLI*RVHIHP Trigger: GGGGTGGATGTGAACTCGCAAAATGAGGTCAACGGC...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS CCA 90 bp | CGGGGGCTTGGATGGGACAGAGAACAGGGAGCGGTTCTGACTCACTaGTGGCTGACAGACAGGACCAGGTTTTGTGCTTTCTGGTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: RGLGWDREQGAVLTH*WLTDRTRFCAFWCS Trigger: AGAACACCAGAAAGCACAAAACCTGGTCCTGTCTGTCAGCCACCAGTGAGTCAGAACCGCTCCCTGTTCTCTGTCCCATCCAAGCCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | ATGCACATGTGGAGATCAGAGGGCAACCTGTGGGAACTGGTTCTCTCCTTCCACAGAGACACCGGGGGCTaGGATGGGACAGAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: MHMWRSEGNLWELVLSFHRDTGG*DGTENR Trigger: CCTGTTCTCTGTCCCATCCAAGCCCCCGGTGTCTCT...GTGGAAGGAGAGAACCAGTTCCCACAGGTTGCCCTCTGATCTCCACATGTGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS TCA 90 bp | AGGGAAAGCTGGGTTGGCCAGATAGTTGGGGACAAAGGGCAGTTCTaGCTCCTTCTTCAGCTGAGGGATCTCCTCCTCCTCATCGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RESWVGQIVGDKGQF*LLLQLRDLLLLIGF Trigger: GAAGCCGATGAGGAGGAGGAGATCCCTCAGCTGAAGAAGGAGTCAGAACTGCCCTTTGTCCCCAACTATCTGGCCAACCCAGCTTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 ENSMUST00000149867.2 |
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| CDS-3UTR CAA 90 bp | AGGCTTTGCAGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAAACCACCTGTCCATGGTaGCGTTTACATGCCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: RLCSRCLYPLSQLASPRQTTCPW*RLHAQC Trigger: ACACTGGGCATGTAAACGCAACCATGGACAGGTGGT...TTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACTGCAAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS-3UTR CAA 90 bp | TGTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCACTCTCAGCAGTTCTaGGTAGGTGAGTTCCTGTCG | + |
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Preference number: 5 (lower is better) Translates to: CGNWFSPSTMWGPGTDRTHSQQF*VGEFLS Trigger: CGACAGGAACTCACCTACCAAGAACTGCTGAGAGTG...AGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS CCA 90 bp | GGGCTTGGATGGGACAGAGAACAGGGAGCGGTTCTGACTCACTGGTaGCTGACAGACAGGACCAGGTTTTGTGCTTTCTGGTGTTCTAAG | + |
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Preference number: 5 (lower is better) Translates to: GLGWDREQGAVLTHW*LTDRTRFCAFWCSK Trigger: CTTAGAACACCAGAAAGCACAAAACCTGGTCCTGTCTGTCAGCCACCAGTGAGTCAGAACCGCTCCCTGTTCTCTGTCCCATCCAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 90 bp | CATATTAAATGGAAATGCTCCGGTGAAGAAAAATGGCTGGAATGCTaGCGCCGGGCCTGCATACGTCCCGTTCTGAGGCTCCAGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: HIKWKCSGEEKWLEC*RRACIRPVLRLQRH Trigger: GTGTCTCTGGAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCATTTAATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | GGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATGAAGTCCCTGCTGCAGCCGTTGACCTCATTTaGCGAGTTCACATCCACCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPEMTHTVTVLSDEVPAAAVDLI*RVHIHP Trigger: GGGGTGGATGTGAACTCGCAAAATGAGGTCAACGGC...TGCAGCAGGGACTTCATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | AGTAGGTGCCTCTACCCACTGAGCCAACTTGCCAGCCCAAGGCAACAGAGCAATAAACAGGTCCAGCCGTaGACCTCATTTTGCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRCLYPLSQLASPRQQSNKQVQP*TSFCEF Trigger: GAACTCGCAAAATGAGGTCAACGGCTGGACCTGTTT...ATTGCTCTGTTGCCTTGGGCTGGCAAGTTGGCTCAGTGGGTAGAGGCACCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS-3UTR CAA 90 bp | GATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGAGAGACACCGGGGGCTaGGATGGGACAGAGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQWLVLWPRDDTYCHSTQRDTGG*DGTENR Trigger: CCTGTTCTCTGTCCCATCCAAGCCCCCGGTGTCTCT...CTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS GCA 90 bp | TTGCATATTAAATGGAAATGCTCCGGTGAAGAAAAATGGCTGGAATaGTGGCGCCGGGCCTGCATACGTCCCGTTCTGAGGCTCCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LHIKWKCSGEEKWLE*WRRACIRPVLRLQR Trigger: TCTCTGGAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCATTTAATATGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | GTGGCACCAGGGGCCCTGGTGGGCATACGAGGCTTTGGGATCAATGGCTTGTCCTTTGAGTACCAGCTCTaGCATATTAAATGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VAPGALVGIRGFGINGLSFEYQL*HIKWKC Trigger: GCATTTCCATTTAATATGCAAGAGCTGGTACTCAAA...GGACAAGCCATTGATCCCAAAGCCTCGTATGCCCACCAGGGCCCCTGGTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | AGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACACCACCTGTCCATGGTaGCGTTTACATGCCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLWDQWLVLWPRDDTYCHTTCPW*RLHAQC Trigger: ACACTGGGCATGTAAACGCAACCATGGACAGGTGGT...GTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | AGGCTTTGGGATCAATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAAACAGGTCCAGCCGTaGACCTCATTTTGCGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLWDQWLVLWPRDDTYCHKQVQP*TSFCEF Trigger: GAACTCGCAAAATGAGGTCAACGGCTGGACCTGTTT...GTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATTGATCCCAAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAACTGGTTCTCTCCTTCCACCATGTGGGGCCCTGGGACAGACAGAACTCTTTGAGTACCAGCTCTaGCATATTAAATGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: VGTGSLLPPCGALGQTELFEYQL*HIKWKC Trigger: GCATTTCCATTTAATATGCAAGAGCTGGTACTCAAA...GAGTTCTGTCTGTCCCAGGGCCCCACATGGTGGAAGGAGAGAACCAGTTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS-3UTR CAA 90 bp | TTTCCCCAGTCTTCCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATACCACCTGTCCATGGTaGCGTTTACATGCCCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FPQSSSLISSKFLECHEHTTCPW*RLHAQC Trigger: ACACTGGGCATGTAAACGCAACCATGGACAGGTGGT...ATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGGAAGACTGGGGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS CCA 90 bp | TTATTGTCACTTATCATCAGAACCAGTTCCAGCTCCTGGAAGTCCTaGAGTCGGGCAACATCTTTGTCCTTTCTTAACAGAGTGTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSLIIRTSSSSWKS*SRATSLSFLNRVLG Trigger: ACCCAACACTCTGTTAAGAAAGGACAAAGATGTTGCCCGACTCCAGGACTTCCAGGAGCTGGAACTGGTTCTGATGATAAGTGACAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCATCAGTTCAAAATTTCTTGAGTGTCACGAGCATGCAACACCAAGAGAGTCGGGCAACATCTTaGTCCTTTCTTAACAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPSSVQNFLSVTSMQHQESRATS*SFLNRV Trigger: CACTCTGTTAAGAAAGGACAAAGATGTTGCCCGACT...CTCTTGGTGTTGCATGCTCGTGACACTCAAGAAATTTTGAACTGATGAGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS CCA 90 bp | TCCTTTCTTAACAGAGTGTTGGGTAACTTTCTTATCTTTTCCACTTaGTCTGGATTAACACCCAGCTCACAGCAGCTCACTCTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFLNRVLGNFLIFST*SGLTPSSQQLTLSS Trigger: ACTGCTGAGAGTGAGCTGCTGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAGAAAGTTACCCAACACTCTGTTAAGAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS CCA 90 bp | ATCTTTCTTAACAGAGTGTTGGGTAACTTTCTTATCTTTTCCACTTaGTCTGGATTAACACCCAGCTCACAGCAGCTCACTCTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IFLNRVLGNFLIFST*SGLTPSSQQLTLSS Trigger: ACTGCTGAGAGTGAGCTGCTGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAGAAAGTTACCCAACACTCTGTTAAGAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021227.6 |
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| CDS CCA 90 bp | TTCTTTCTTAACAGAGTGTTGGGTAACTTTCTTATCTTTTCCACTTaGTCTGGATTAACACCCAGCTCACAGCAGCTCACTCTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: FFLNRVLGNFLIFST*SGLTPSSQQLTLSS Trigger: ACTGCTGAGAGTGAGCTGCTGTGAGCTGGGTGTTAATCCAGACCAAGTGGAAAAGATAAGAAAGTTACCCAACACTCTGTTAAGAAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
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| CDS CCA 90 bp | AACAGAAAATTATTGTCACTTATCATCAGAACCAGTTCCAGCTCCTaGAAGTCCTGGAGTCGGGCAACATCTTTGTCCTTTCTTAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRKLLSLIIRTSSSS*KSWSRATSLSFLNR Trigger: TCTGTTAAGAAAGGACAAAGATGTTGCCCGACTCCAGGACTTCCAGGAGCTGGAACTGGTTCTGATGATAAGTGACAATAATTTTCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS-3UTR CAA 90 bp | AATGGCTTGTCCTTTGGCCCAGAGATGACACATACTGTCACAGTACTCAGTGATTTTGAGTACCAGCTCTaGCATATTAAATGGAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: NGLSFGPEMTHTVTVLSDFEYQL*HIKWKC Trigger: GCATTTCCATTTAATATGCAAGAGCTGGTACTCAAA...ATCACTGAGTACTGTGACAGTATGTGTCATCTCTGGGCCAAAGGACAAGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS GCA 72 bp | TGCGAGTTCACATCCACCCCGCTCTCCACCAGTTTCTaGACCTCCCGAATGTCCCCCAAGGCCGCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CEFTSTPLSTSF*TSRMSPKAAAS Trigger: GGAGGCGGCGGCCTTGGGGGACATTCGGGAGGTGCAGAAACTGGTGGAGAGCGGGGTGGATGTGAACTCGCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS GCA 72 bp | GGTGAAGAAAAATGGCTGGAATGCTGGCGCCGGGCCTaGATACGTCCCGTTCTGAGGCTCCAGAGACACCGG | + |
|
Preference number: 6 (lower is better) Translates to: GEEKWLECWRRA*IRPVLRLQRHR Trigger: CCGGTGTCTCTGGAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 72 bp | TGGAAATGCTCCGGTGAAGAAAAATGGCTGGAATGCTaGCGCCGGGCCTGCATACGTCCCGTTCTGAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: WKCSGEEKWLEC*RRACIRPVLRL Trigger: GAGCCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS TCA 72 bp | TGGGTTGGCCAGATAGTTGGGGACAAAGGGCAGTTCTaGCTCCTTCTTCAGCTGAGGGATCTCCTCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WVGQIVGDKGQF*LLLQLRDLLLL Trigger: GAGGAGGAGGAGATCCCTCAGCTGAAGAAGGAGTCAGAACTGCCCTTTGTCCCCAACTATCTGGCCAACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 ENSMUST00000149867.2 |
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| CDS GCA 72 bp | GCCCAGTGTAAACAGGTCCAGCCGTTGACCTCATTTTaGGAGTTCACATCCACCCCGCTCTCCACCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AQCKQVQPLTSF*EFTSTPLSTSF Trigger: GAAACTGGTGGAGAGCGGGGTGGATGTGAACTCGCAAAATGAGGTCAACGGCTGGACCTGTTTACACTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS GCA 72 bp | AAATGGAAATGCTCCGGTGAAGAAAAATGGCTGGAATaGTGGCGCCGGGCCTGCATACGTCCCGTTCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KWKCSGEEKWLE*WRRACIRPVLR Trigger: CCTCAGAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS GCA 72 bp | CTGATTGTAGCAGGTAGGACACCACCTGTCCATGGTTaGGTTTACATGCCCAGTGTAAACAGGTCCAGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LIVAGRTPPVHG*VYMPSVNRSSR Trigger: ACGGCTGGACCTGTTTACACTGGGCATGTAAACGCAACCATGGACAGGTGGTGTCCTACCTGCTACAATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 72 bp | ATATTAAATGGAAATGCTCCGGTGAAGAAAAATGGCTaGAATGCTGGCGCCGGGCCTGCATACGTCCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILNGNAPVKKNG*NAGAGPAYVPF Trigger: GAACGGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCATTTAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 72 bp | TTGCATATTAAATGGAAATGCTCCGGTGAAGAAAAATaGCTGGAATGCTGGCGCCGGGCCTGCATACGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHIKWKCSGEEK*LECWRRACIRP Trigger: GGGACGTATGCAGGCCCGGCGCCAGCATTCCAGCCATTTTTCTTCACCGGAGCATTTCCATTTAATATGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 72 bp | GAAATATCACCATTCTGGACCAATGCCAAAGAGCTGTaGTCCCTAGGAAAGGCCCCTAGCAAAGGGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EISPFWTNAKEL*SLGKAPSKGVS Trigger: AGAAACCCCTTTGCTAGGGGCCTTTCCTAGGGACCACAGCTCTTTGGCATTGGTCCAGAATGGTGATATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CCA 72 bp | TGGTGGCTGACAGACAGGACCAGGTTTTGTGCTTTCTaGTGTTCTAAGTATGGCAGAGGGGGCAGAAATATC | + |
|
Preference number: 6 (lower is better) Translates to: WWLTDRTRFCAF*CSKYGRGGRNI Trigger: GATATTTCTGCCCCCTCTGCCATACTTAGAACACCAGAAAGCACAAAACCTGGTCCTGTCTGTCAGCCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021227.6 ENSMUST00000051221.13 ENSMUST00000107818.9 |
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| CDS CAA 90 bp | AAGTCCTGGAGTCGGGCAACATCTTTGTCCTTTCTTAACAGAGTGTaGGGTAACTTTCTTATCTTTTCCACTTGGTCTGGATTAACACCC | + |
|
Preference number: 6 (lower is better) Translates to: KSWSRATSLSFLNRV*GNFLIFSTWSGLTP Trigger: GGGTGTTAATCCAGACCAAGTGGAAAAGATAAGAAAGTTACCCAACACTCTGTTAAGAAAGGACAAAGATGTTGCCCGACTCCAGGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107818.9 |
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| CDS CCA 72 bp | CAGTGTGGATGCAGCGTTTCTTTCTTAACAGAGTGTTaGGTAACTTTCTTATCTTTTCCACTTGGTCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QCGCSVSFLTEC*VTFLSFPLGLD Trigger: ATCCAGACCAAGTGGAAAAGATAAGAAAGTTACCCAACACTCTGTTAAGAAAGAAACGCTGCATCCACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051221.13 |
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